RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACTL10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078129

Ensembl transcript IDs: ENSMUST00000104928.2

Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCCCGCGTAGATGGGTGTaGCGTGGCACACGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPPRRWV*RGTRPR
Trigger: GCGCGGGCGTGTGCCACGCCACACCCATCTACGCGG...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR GCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCACCAGCACAGGCCACTaGTCGGGGTGGACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPTSTGH*SGWTCR
Trigger: CCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGT...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCCTTGGAAGGCCAGCGTaGGCAGTCCTGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPLGRPA*AVLAQG
Trigger: ACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAG...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGCAACCTGGTGCTCCTaGCAGCACAGGCCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSATWCS*QHRPVP
Trigger: TGGGACCGGCCTGTGCTGCCAGGAGCACCAGGTTGC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR TCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGGTGGCCTTGTGCCATaGGTGACCCGCGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSGGLVP*VTRVDG
Trigger: CCCATCTACGCGGGTCACTCATGGCACAAGGCCACC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR GCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCAGCGCGACAGGGTACTaGCTGCCACATTCAGACGGA +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPSATGY*LPHSDG
Trigger: TCCGTCTGAATGTGGCAGGCAGTACCCTGTCGCGCT...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR GCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCCCAGCTCCAGGTTCATaGGCTCCACAAAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPPAPGS*APQSQG
Trigger: TCCCTGGCTTTGTGGAGCGCATGAACCTGGAGCTGG...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCTGCCAGCTCGCAACCTaGTGCTCCTGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSCQLAT*CSWQHR
Trigger: CCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCA...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCAGCAGCGCTGTGTTaGCCATGTGGCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSPAALC*PCGTQA
Trigger: TGCCTGCGTGCCACATGGCCAACACAGCGCTGCTGG...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCAGTGACCCGCGTAGATaGGTGTGGCGTGGCACACGC +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSSDPRR*VWRGTR
Trigger: GCGTGTGCCACGCCACACCCATCTACGCGGGTCACT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCCCTAGGAGACTTGGCTaGAAGATGGGTTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPPRRLG*KMGSGQ
Trigger: CTGCCCTGAACCCATCTTCCAGCCAAGTCTCCTAGG...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCAGTCCTGGCTCAGGGTaGCCTAGGAGACTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSSPGSG*PRRLGW
Trigger: CCAGCCAAGTCTCCTAGGCCACCCTGAGCCAGGACT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCTAGCACCACCGTATTaGCCAGCCGTGTCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSLAPPY*PAVSAV
Trigger: CACTGCGGACACGGCTGGCCAATACGGTGGTGCTAG...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCAGCCAGGGAAAAGGGTaGAACCTCCAGCTAGCACCA +
Preference number: 4 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPSQGKG*NLQLAP
Trigger: TGGTGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCT...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCGTGTTCCTGGTACATaGCCCGAGTCATCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSRVPGT*PESSSG
Trigger: GCCGCTGGATGACTCGGGCCATGTACCAGGAACACG...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCAGGCCGGTCCCAACTaGGCATCAGACTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSQAGPN*ASDLSS
Trigger: AGAGCTCAAGTCTGATGCCCAGTTGGGACCGGCCTG...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGCTGTGTTGGCCATGTaGCACGCAGGCACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSAVLAM*HAGTVR
Trigger: CCTAACAGTGCCTGCGTGCCACATGGCCAACACAGC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCAAAGGGCCGTGTTCCTaGTACATGGCCCGAGTCATC +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSKGPCS*YMARVI
Trigger: GATGACTCGGGCCATGTACCAGGAACACGGCCCTTT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCATCTTTTGCAGTGCTTaGAAGGCCAGCGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSIFCSA*KASVGS
Trigger: ACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGAT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGTGTCCGCAGTGTTGTaGGTATCTTTTGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSVSAVL*VSFAVL
Trigger: AAGCACTGCAAAAGATACCCACAACACTGCGGACAC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR GCA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCAAAGGAGTTCAAGGATaGCATCATGGATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSKGVQG*HHGSSS
Trigger: ACTGGAGGATCCATGATGGCATCCTTGAACTCCTTT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 90 bp GTGTGGCGTGGCACACGCCCGCGCCCGCCTCCACAGCCAGCCCACTaGAAGCTCCTATGGAGCAGAGTGCCAGCAGCGCTGTGTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VWRGTRPRPPPQPAH*KLLWSRVPAALCWP
Trigger: TGGCCAACACAGCGCTGCTGGCACTCTGCTCCATAGGAGCTTTCAGTGGGCTGGCTGTGGAGGCGGGCGCGGGCGTGTGCCACGCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 90 bp GCCATCATGGATCCTCCAGTCCACACAGCTGTGTCCCGCCCGGGATaGGCCACCAGACAGGGCTGCAGGGCCGGGTACCCATGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: AIMDPPVHTAVSRPG*ATRQGCRAGYPCLR
Trigger: CCGGAGGCATGGGTACCCGGCCCTGCAGCCCTGTCTGGTGGCTCATCCCGGGCGGGACACAGCTGTGTGGACTGGAGGATCCATGATGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CACCACTACTCCATGCTTGATAGGGTGCGCACGGGCCACGCCGCCTaGCAGCTCGCAACCTGGTGCTCCTGGCAGCACAGGCCGGTCCCA +
Preference number: 5 (lower is better)
Translates to: HHYSMLDRVRTGHAA*QLATWCSWQHRPVP
Trigger: TGGGACCGGCCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CAGGGCAGCGGAAGCGCTCGCTGCCGAGGCGCACGTAGCAGCCATTaGCCAGGCAAAAACAGGCCCTCTGGTGGCGGGCAGGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: QGSGSARCRGARSSH*PGKNRPSGGGQGHR
Trigger: TCTGTGACCCTGCCCGCCACCAGAGGGCCTGTTTTTGCCTGGGCAATGGCTGCTACGTGCGCCTCGGCAGCGAGCGCTTCCGCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CATTCAGACGGAAGGTGGCCTTGTGCCATGAGTGACCCGCGTAGATaGGTGTGGCGTGGCACACGCCCGCGCCCGCCTCCACAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: HSDGRWPCAMSDPRR*VWRGTRPRPPPQPA
Trigger: GGCTGGCTGTGGAGGCGGGCGCGGGCGTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCCGTCTGAATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CCCTCCAGTGCGTCCCAGTCCACCACTACTCCATGCTTGATAGGGTaGGCACGGGCCACGCCGCCTGCCAGCTCGCAACCTGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PSSASQSTTTPCLIG*ARATPPASSQPGAP
Trigger: AGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTGGACTGGGACGCACTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CGCTCCCACAGTCCCTCCAGTGCGTCCCAGTCCACCACTACTCCATaGTTGATAGGGTGCGCACGGGCCACGCCGCCTGCCAGCTCGCAA +
Preference number: 5 (lower is better)
Translates to: RSHSPSSASQSTTTP*LIGCARATPPASSQ
Trigger: TTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTGGACTGGGACGCACTGGAGGGACTGTGGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp GATGGTGAGTCGCTCACCAGCACAGGCCACTGCTCGGGGTGGACCTaGAGGCCTCCCACCATTAGGCGCTCCCACAGTCCCTCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: DGESLTSTGHCSGWT*RPPTIRRSHSPSSA
Trigger: CGCACTGGAGGGACTGTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGACTCACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CCCTTGGGTGGTGCTGATGGTGAGTCGCTCACCAGCACAGGCCACTaGTCGGGGTGGACCTGCAGGCCTCCCACCATTAGGCGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: PLGGADGESLTSTGH*SGWTCRPPTIRRSH
Trigger: GTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp GGTGCTGATGGTGAGTCGCTCACCAGCACAGGCCACTGCTCGGGGTaGACCTGCAGGCCTCCCACCATTAGGCGCTCCCACAGTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GADGESLTSTGHCSG*TCRPPTIRRSHSPS
Trigger: GGAGGGACTGTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGACTCACCATCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 90 bp CAGGGTACTGCCTGCCACATTCAGACGGAAGGTGGCCTTGTGCCATaGGTGACCCGCGTAGATGGGTGTGGCGTGGCACACGCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: QGTACHIQTEGGLVP*VTRVDGCGVAHARA
Trigger: GGCGCGGGCGTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CACCAGACAGGGCTGCAGGGCCGGGTACCCATGCCTCCGGCACTGTaGCTCCAGCTCCAGGTTCATGCGCTCCACAAAGCCAGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: HQTGLQGRVPMPPAL*LQLQVHALHKAREK
Trigger: CTTTTCCCTGGCTTTGTGGAGCGCATGAACCTGGAGCTGGAGGCACAGTGCCGGAGGCATGGGTACCCGGCCCTGCAGCCCTGTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp CCGGGTACCCATGCCTCCGGCACTGTGCCTCCAGCTCCAGGTTCATaGGCTCCACAAAGCCAGGGAAAAGGGTGGAACCTCCAGCTAGCA +
Preference number: 5 (lower is better)
Translates to: PGTHASGTVPPAPGS*APQSQGKGWNLQLA
Trigger: TGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCTTTGTGGAGCGCATGAACCTGGAGCTGGAGGCACAGTGCCGGAGGCATGGGTACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CTGTTAGGGCCTCGAACAGCAGCTCAGCCACCTTCTCTCGGCCCTTaGGTGGTGCTGATGGTGAGTCGCTCACCAGCACAGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: LLGPRTAAQPPSLGP*VVLMVSRSPAQATA
Trigger: AGCAGTGGCCTGTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGTGGCTGAGCTGCTGTTCGAGGCCCTAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp ACCACCGTATTGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTTaGAGTGCTTGGAAGGCCAGCGTGGGCAGTCCTGGCTCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: TTVLASRVRSVVGIF*SAWKASVGSPGSGW
Trigger: CCACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp GAAAGTAGCGCGACAGGGTACTGCCTGCCACATTCAGACGGAAGGTaGCCTTGTGCCATGAGTGACCCGCGTAGATGGGTGTGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: ESSATGYCLPHSDGR*PCAMSDPRRWVWRG
Trigger: GCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTGTCGCGCTACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp TTGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTTGCAGTGCTTaGAAGGCCAGCGTGGGCAGTCCTGGCTCAGGGTGGCCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: LASRVRSVVGIFCSA*KASVGSPGSGWPRR
Trigger: TCTCCTAGGCCACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CCTCCAGCTCCAGGTTCATGCGCTCCACAAAGCCAGGGAAAAGGGTaGAACCTCCAGCTAGCACCACCGTATTGGCCAGCCGTGTCCGCA +
Preference number: 5 (lower is better)
Translates to: PPAPGSCAPQSQGKG*NLQLAPPYWPAVSA
Trigger: TGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCTTTGTGGAGCGCATGAACCTGGAGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CTCCAGCTAGCACCACCGTATTGGCCAGCCGTGTCCGCAGTGTTGTaGGTATCTTTTGCAGTGCTTGGAAGGCCAGCGTGGGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LQLAPPYWPAVSAVL*VSFAVLGRPAWAVL
Trigger: CAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CCCGAGTCATCCAGCGGCACTGAAAGGAGTTCAAGGATGCCATCATaGATCCTCCAGTCCACACAGCTGTGTCCCGCCCGGGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: PESSSGTERSSRMPS*ILQSTQLCPARDEP
Trigger: TGGCTCATCCCGGGCGGGACACAGCTGTGTGGACTGGAGGATCCATGATGGCATCCTTGAACTCCTTTCAGTGCCGCTGGATGACTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp TCCGCAGTGTTGTGGGTATCTTTTGCAGTGCTTGGAAGGCCAGCGTaGGCAGTCCTGGCTCAGGGTGGCCTAGGAGACTTGGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SAVLWVSFAVLGRPA*AVLAQGGLGDLAGR
Trigger: TCTTCCAGCCAAGTCTCCTAGGCCACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGCCAGCAGCGCTGTGTaGGCCATGTGGCACGCAGGC +
Preference number: 5 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSASSAV*AMWHAG
Trigger: GCCTGCGTGCCACATGGCCAACACAGCGCTGCTGGC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 90 bp GGCATGCTGCCACTAGCAAATCTCGAAAGTAGCGCGACAGGGTACTaGCTGCCACATTCAGACGGAAGGTGGCCTTGTGCCATGAGTGAC +
Preference number: 5 (lower is better)
Translates to: GMLPLANLESSATGY*LPHSDGRWPCAMSD
Trigger: GTCACTCATGGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTGTCGCGCTACTTTCGAGATTTGCTAGTGGCAGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCGCTAGCACCACCGTATaGGCCAGCCGTGTCCGCAGT +
Preference number: 5 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSASTTV*ASRVRS
Trigger: ACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGC...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 90 bp AAAGGGCCGTGTTCCTGGTACATGGCCCGAGTCATCCAGCGGCACTaGAAGGAGTTCAAGGATGCCATCATGGATCCTCCAGTCCACACA +
Preference number: 5 (lower is better)
Translates to: KGPCSWYMARVIQRH*KEFKDAIMDPPVHT
Trigger: TGTGTGGACTGGAGGATCCATGATGGCATCCTTGAACTCCTTTCAGTGCCGCTGGATGACTCGGGCCATGTACCAGGAACACGGCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp CAAAGCCAGGGAAAAGGGTGGAACCTCCAGCTAGCACCACCGTATTaGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTTGCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: QSQGKGWNLQLAPPY*PAVSAVLWVSFAVL
Trigger: AAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCACCTTCTCTCGGCCCTaGGGTGGTGCTGATGGTGAG +
Preference number: 5 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSTFSRP*GGADGE
Trigger: CTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCTATCTTTTGCAGTGCTaGGAAGGCCAGCGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPYLLQC*EGQRGQ
Trigger: CTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATA...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp TATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCCCCGCCGTGTCCGCAGTGTaGTGGGTATCTTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: YLVLRARTEVQPLFLKSPAVSAV*WVSFAV
Trigger: CACTGCAAAAGATACCCACAACACTGCGGACACGGC...GGGGGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 90 bp AATCGAATACATCTCGCACCAGCAAAGGGCCGTGTTCCTGGTACATaGCCCGAGTCATCCAGCGGCACTGAAAGGAGTTCAAGGATGCCA +
Preference number: 5 (lower is better)
Translates to: NRIHLAPAKGRVPGT*PESSSGTERSSRMP
Trigger: TGGCATCCTTGAACTCCTTTCAGTGCCGCTGGATGACTCGGGCCATGTACCAGGAACACGGCCCTTTGCTGGTGCGAGATGTATTCGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCAACTGGGCATCAGACTaGAGCTCTTCAGCACAATGC +
Preference number: 5 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSNWASD*SSSAQC
Trigger: GCATTGTGCTGAAGAGCTCAAGTCTGATGCCCAGTT...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS-3UTR CAA 90 bp GTTTATCTGGTTCTCCGTGCTAGGACAGAGGTACAGCCTCTGTTCCTGAAGTCCTGTTGTGGGTATCTTTaGCAGTGCTTGGAAGGCCAG +
Preference number: 5 (lower is better)
Translates to: VYLVLRARTEVQPLFLKSCCGYL*QCLEGQ
Trigger: CTGGCCTTCCAAGCACTGCAAAAGATACCCACAACA...GGACTTCAGGAACAGAGGCTGTACCTCTGTCCTAGCACGGAGAACCAGATAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GTGCGCACGGGCCACGCCGCCTGCCAGCTCGCAACCTaGTGCTCCTGGCAGCACAGGCCGGTCCCAACTGGG +
Preference number: 6 (lower is better)
Translates to: VRTGHAACQLAT*CSWQHRPVPTG
Trigger: CCCAGTTGGGACCGGCCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp CGCACGGGCCACGCCGCCTGCCAGCTCGCAACCTGGTaGTCCTGGCAGCACAGGCCGGTCCCAACTGGGCAT +
Preference number: 6 (lower is better)
Translates to: RTGHAACQLATW*SWQHRPVPTGH
Trigger: ATGCCCAGTTGGGACCGGCCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 72 bp GGCACACGCCCGCGCCCGCCTCCACAGCCAGCCCACTaGAAGCTCCTATGGAGCAGAGTGCCAGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: GTRPRPPPQPAH*KLLWSRVPAAL
Trigger: CAGCGCTGCTGGCACTCTGCTCCATAGGAGCTTTCAGTGGGCTGGCTGTGGAGGCGGGCGCGGGCGTGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GGCCACGCCGCCTGCCAGCTCGCAACCTGGTGCTCCTaGCAGCACAGGCCGGTCCCAACTGGGCATCAGACT +
Preference number: 6 (lower is better)
Translates to: GHAACQLATWCS*QHRPVPTGHQT
Trigger: AGTCTGATGCCCAGTTGGGACCGGCCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp TGGCCTTGTGCCATGAGTGACCCGCGTAGATGGGTGTaGCGTGGCACACGCCCGCGCCCGCCTCCACAGCCA +
Preference number: 6 (lower is better)
Translates to: WPCAMSDPRRWV*RGTRPRPPPQP
Trigger: TGGCTGTGGAGGCGGGCGCGGGCGTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GGAAGGTGGCCTTGTGCCATGAGTGACCCGCGTAGATaGGTGTGGCGTGGCACACGCCCGCGCCCGCCTCCA +
Preference number: 6 (lower is better)
Translates to: GRWPCAMSDPRR*VWRGTRPRPPP
Trigger: TGGAGGCGGGCGCGGGCGTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp TCCATGCTTGATAGGGTGCGCACGGGCCACGCCGCCTaGCAGCTCGCAACCTGGTGCTCCTGGCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: SMLDRVRTGHAA*QLATWCSWQHR
Trigger: CCTGTGCTGCCAGGAGCACCAGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp TCGCTCACCAGCACAGGCCACTGCTCGGGGTGGACCTaGAGGCCTCCCACCATTAGGCGCTCCCACAGTCCC +
Preference number: 6 (lower is better)
Translates to: SLTSTGHCSGWT*RPPTIRRSHSP
Trigger: GGGACTGTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp GGAAGCGCTCGCTGCCGAGGCGCACGTAGCAGCCATTaGCCAGGCAAAAACAGGCCCTCTGGTGGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: GSARCRGARSSH*PGKNRPSGGGQ
Trigger: CTGCCCGCCACCAGAGGGCCTGTTTTTGCCTGGGCAATGGCTGCTACGTGCGCCTCGGCAGCGAGCGCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GGTGAGTCGCTCACCAGCACAGGCCACTGCTCGGGGTaGACCTGCAGGCCTCCCACCATTAGGCGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: GESLTSTGHCSG*TCRPPTIRRSH
Trigger: GTGGGAGCGCCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGACTCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp GCGTCCCAGTCCACCACTACTCCATGCTTGATAGGGTaGGCACGGGCCACGCCGCCTGCCAGCTCGCAACCT +
Preference number: 6 (lower is better)
Translates to: ASQSTTTPCLIG*ARATPPASSQP
Trigger: AGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTGGACTGGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 90 bp TCCCACAGTCCCTCCAGTGCGTCCCAGTCCACCACTACTCCATGCTaGATAGGGTGCGCACGGGCCACGCCGCCTGCCAGCTCGCAACCT +
Preference number: 6 (lower is better)
Translates to: SHSPSSASQSTTTPC*IGCARATPPASSQP
Trigger: AGGTTGCGAGCTGGCAGGCGGCGTGGCCCGTGCGCACCCTATCAAGCATGGAGTAGTGGTGGACTGGGACGCACTGGAGGGACTGTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp GGTGCTGATGGTGAGTCGCTCACCAGCACAGGCCACTaGTCGGGGTGGACCTGCAGGCCTCCCACCATTAGG +
Preference number: 6 (lower is better)
Translates to: GADGESLTSTGH*SGWTCRPPTIR
Trigger: CCTAATGGTGGGAGGCCTGCAGGTCCACCCCGAGCAGTGGCCTGTGCTGGTGAGCGACTCACCATCAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GCTTGGAAGGCCAGCGTGGGCAGTCCTGGCTCAGGGTaGCCTAGGAGACTTGGCTGGAAGATGGGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: AWKASVGSPGSG*PRRLGWKMGSG
Trigger: CCCTGAACCCATCTTCCAGCCAAGTCTCCTAGGCCACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 90 bp ACTGTTAGGGCCTCGAACAGCAGCTCAGCCACCTTCTCTCGGCCCTaGGGTGGTGCTGATGGTGAGTCGCTCACCAGCACAGGCCACTGC +
Preference number: 6 (lower is better)
Translates to: TVRASNSSSATFSRP*GGADGESLTSTGHC
Trigger: GCAGTGGCCTGTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGTGGCTGAGCTGCTGTTCGAGGCCCTAACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 72 bp GCCTGCCACATTCAGACGGAAGGTGGCCTTGTGCCATaGGTGACCCGCGTAGATGGGTGTGGCGTGGCACAC +
Preference number: 6 (lower is better)
Translates to: ACHIQTEGGLVP*VTRVDGCGVAH
Trigger: GTGTGCCACGCCACACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp CACAGCCAGCCCACTGAAAGCTCCTATGGAGCAGAGTaGCAGCAGCGCTGTGTTGGCCATGTGGCACGCAGG +
Preference number: 6 (lower is better)
Translates to: HSQPTESSYGAE*QQRCVGHVARR
Trigger: CCTGCGTGCCACATGGCCAACACAGCGCTGCTGGCACTCTGCTCCATAGGAGCTTTCAGTGGGCTGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp CCTCGAACAGCAGCTCAGCCACCTTCTCTCGGCCCTTaGGTGGTGCTGATGGTGAGTCGCTCACCAGCACAG +
Preference number: 6 (lower is better)
Translates to: PRTAAQPPSLGP*VVLMVSRSPAQ
Trigger: CTGTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGTGGCTGAGCTGCTGTTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 72 bp GCCTCGAACAGCAGCTCAGCCACCTTCTCTCGGCCCTaGGGTGGTGCTGATGGTGAGTCGCTCACCAGCACA +
Preference number: 6 (lower is better)
Translates to: ASNSSSATFSRP*GGADGESLTST
Trigger: TGTGCTGGTGAGCGACTCACCATCAGCACCACCCAAGGGCCGAGAGAAGGTGGCTGAGCTGCTGTTCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 90 bp CACCACCGTATTGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTaGCAGTGCTTGGAAGGCCAGCGTGGGCAGTCCTGGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: HHRIGQPCPQCCGYL*QCLEGQRGQSWLRV
Trigger: CACCCTGAGCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp TTGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTTaGAGTGCTTGGAAGGCCAGCGTGGGCAGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LASRVRSVVGIF*SAWKASVGSPG
Trigger: GCCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GCGACAGGGTACTGCCTGCCACATTCAGACGGAAGGTaGCCTTGTGCCATGAGTGACCCGCGTAGATGGGTG +
Preference number: 6 (lower is better)
Translates to: ATGYCLPHSDGR*PCAMSDPRRWV
Trigger: CACCCATCTACGCGGGTCACTCATGGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GCACCACCGTATTGGCCAGCCGTGTCCGCAGTGTTGTaGGTATCTTTTGCAGTGCTTGGAAGGCCAGCGTGG +
Preference number: 6 (lower is better)
Translates to: APPYWPAVSAVL*VSFAVLGRPAW
Trigger: CCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp TCCAGCGGCACTGAAAGGAGTTCAAGGATGCCATCATaGATCCTCCAGTCCACACAGCTGTGTCCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: SSGTERSSRMPS*ILQSTQLCPAR
Trigger: CCGGGCGGGACACAGCTGTGTGGACTGGAGGATCCATGATGGCATCCTTGAACTCCTTTCAGTGCCGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 72 bp ATTGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTaGCAGTGCTTGGAAGGCCAGCGTGGGCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: IGQPCPQCCGYL*QCLEGQRGQSW
Trigger: CCAGGACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 90 bp AACCTCCAGCTAGCACCACCGTATTGGCCAGCCGTGTCCGCAGTGTaGTGGGTATCTTTTGCAGTGCTTGGAAGGCCAGCGTGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: NLQLAPPYWPAVSAV*WVSFAVLGRPAWAV
Trigger: GACTGCCCACGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp CATCTCGCACCAGCAAAGGGCCGTGTTCCTGGTACATaGCCCGAGTCATCCAGCGGCACTGAAAGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: HLAPAKGRVPGT*PESSSGTERSS
Trigger: TGAACTCCTTTCAGTGCCGCTGGATGACTCGGGCCATGTACCAGGAACACGGCCCTTTGCTGGTGCGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 72 bp CTAGCACCACCGTATTGGCCAGCCGTGTCCGCAGTGTaGTGGGTATCTTTTGCAGTGCTTGGAAGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: LAPPYWPAVSAV*WVSFAVLGRPA
Trigger: CGCTGGCCTTCCAAGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 72 bp AGCTGTGTAACGGTCTTGCGGGACAGGCCCTGCAGCTaGAGATCTGGGCATGCTGCCACTAGCAAATCTCGA +
Preference number: 6 (lower is better)
Translates to: SCVTVLRDRPCS*RSGHAATSKSR
Trigger: TCGAGATTTGCTAGTGGCAGCATGCCCAGATCTTCAGCTGCAGGGCCTGTCCCGCAAGACCGTTACACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS GCA 72 bp CCACTAGCAAATCTCGAAAGTAGCGCGACAGGGTACTaGCTGCCACATTCAGACGGAAGGTGGCCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: PLANLESSATGY*LPHSDGRWPCA
Trigger: GGCACAAGGCCACCTTCCGTCTGAATGTGGCAGGCAGTACCCTGTCGCGCTACTTTCGAGATTTGCTAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 72 bp GGGAAAAGGGTGGAACCTCCAGCTAGCACCACCGTATaGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTT +
Preference number: 6 (lower is better)
Translates to: GKRVEPPASTTV*ASRVRSVVGIF
Trigger: AAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CAA 90 bp ACAAAGCCAGGGAAAAGGGTGGAACCTCCAGCTAGCACCACCGTATaGGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTTGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: TKPGKRVEPPASTTV*ASRVRSVVGIFCSA
Trigger: AGCACTGCAAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCCCTGGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS CCA 72 bp GGAAAAGGGTGGAACCTCCAGCTAGCACCACCGTATTaGCCAGCCGTGTCCGCAGTGTTGTGGGTATCTTTT +
Preference number: 6 (lower is better)
Translates to: GKGWNLQLAPPY*PAVSAVLWVSF
Trigger: AAAAGATACCCACAACACTGCGGACACGGCTGGCCAATACGGTGGTGCTAGCTGGAGGTTCCACCCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2
CDS TCA 72 bp TGTTCCTGGTACATGGCCCGAGTCATCCAGCGGCACTaGAAGGAGTTCAAGGATGCCATCATGGATCCTCCA +
Preference number: 6 (lower is better)
Translates to: CSWYMARVIQRH*KEFKDAIMDPP
Trigger: TGGAGGATCCATGATGGCATCCTTGAACTCCTTTCAGTGCCGCTGGATGACTCGGGCCATGTACCAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000104928.2