Pregenerated sensors for ACTE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031085Ensembl transcript IDs: ENSMUST00000134455.3, ENSMUST00000152910.3, ENSMUST00000207235.2, ENSMUST00000207482.2, ENSMUST00000207630.2, ENSMUST00000207642.2, ENSMUST00000208038.2, ENSMUST00000208153.2, ENSMUST00000208457.2, ENSMUST00000208625.2, ENSMUST00000208761.2
Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCCTGTCCCTGGGTGGCCTGTGGGCCAGGACTATACTGGAAAGAATaGCTTTGTCCTTGTCCGGCCTCTCTGTTCCCTCCAGGCCTCCCA | + |
Preference number: 1 (lower is better) Translates to: ACPWVACGPGLYWKE*LCPCPASLFPPGLP Trigger: TGGGAGGCCTGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR CCA 90 bp | TCGAATAGGATCTGGGGAGGAAGATTGGCATGCTGGCTGGCCAGGTaGCACACACTGCCCCCGTGCTCAGGAGTACATCTTGCAGCAGGC | + |
Preference number: 1 (lower is better) Translates to: SNRIWGGRLACWLAR*HTLPPCSGVHLAAG Trigger: GCCTGCTGCAAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 90 bp | TGGTGGGATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTaGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGC | + |
Preference number: 1 (lower is better) Translates to: WWDFSQDMMLSRVSM*IPGLALSRRLVSKS Trigger: GCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATCCCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 90 bp | CCAACCCCTCTAGCACATTCTGGTGGCCTGTCCCTGGGTGGCCTGTaGGCCAGGACTATACTGGAAAGAATGACTTTGTCCTTGTCCGGC | + |
Preference number: 1 (lower is better) Translates to: PTPLAHSGGLSLGGL*ARTILERMTLSLSG Trigger: GCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAGAGGGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR CCA 90 bp | GCTGCAGTGGTGCCAAGCCTCTACCTGGGCTTCATGACACAGCACTaGGGCCTTAGACAGACTCAGTTATGCACTGAGTCACCAGCACCT | + |
Preference number: 1 (lower is better) Translates to: AAVVPSLYLGFMTQH*GLRQTQLCTESPAP Trigger: AGGTGCTGGTGACTCAGTGCATAACTGAGTCTGTCTAAGGCCCCAGTGCTGTGTCATGAAGCCCAGGTAGAGGCTTGGCACCACTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 90 bp | CCAATGAACCAGTCTTGTTCTCCCAACCCCTCTAGCACATTCTGGTaGCCTGTCCCTGGGTGGCCTGTGGGCCAGGACTATACTGGAAAG | + |
Preference number: 1 (lower is better) Translates to: PMNQSCSPNPSSTFW*PVPGWPVGQDYTGK Trigger: CTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAGAGGGGTTGGGAGAACAAGACTGGTTCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR TCA 90 bp | ACTGTCGAGGAGCTGCAGTGGTGCCAAGCCTCTACCTGGGCTTCATaGCACAGCACTGGGGCCTTAGACAGACTCAGTTATGCACTGAGT | + |
Preference number: 1 (lower is better) Translates to: TVEELQWCQASTWAS*HSTGALDRLSYALS Trigger: ACTCAGTGCATAACTGAGTCTGTCTAAGGCCCCAGTGCTGTGTCATGAAGCCCAGGTAGAGGCTTGGCACCACTGCAGCTCCTCGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR GCA 90 bp | ACATGTCTGATTCTCCAAGTCGTCAGACTGGCTGGCTTCGGAGTCTaGCTCAGAAGGTCCAGTAGTCTCCGACGGCATCACCTACTGTCG | + |
Preference number: 1 (lower is better) Translates to: TCLILQVVRLAGFGV*LRRSSSLRRHHLLS Trigger: CGACAGTAGGTGATGCCGTCGGAGACTACTGGACCTTCTGAGGCAGACTCCGAAGCCAGCCAGTCTGACGACTTGGAGAATCAGACATGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR GCA 90 bp | GGGAGACTAAGCCTGGGGTGGGCAGCGGCCATCTCTAGCTGGCTCTaGTGTGAAGTGGCTGTTCTAGCTTCATTCTGTGGCTGTGATAAA | + |
Preference number: 1 (lower is better) Translates to: GRLSLGWAAAISSWL*CEVAVLASFCGCDK Trigger: TTTATCACAGCCACAGAATGAAGCTAGAACAGCCACTTCACAGCAGAGCCAGCTAGAGATGGCCGCTGCCCACCCCAGGCTTAGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR TCA 90 bp | AGACGGCACAGACAGAATGGTGGCCACCATCTCTTCACACATGTCTaGTTCTCCAAGTCGTCAGACTGGCTGGCTTCGGAGTCTGCCTCA | + |
Preference number: 1 (lower is better) Translates to: RRHRQNGGHHLFTHV*FSKSSDWLASESAS Trigger: TGAGGCAGACTCCGAAGCCAGCCAGTCTGACGACTTGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR GCA 90 bp | ACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTaGATCCGGAATCGTAGGCCAGTACAGGCACTGGTGCCACCAGTC | + |
Preference number: 1 (lower is better) Translates to: TFTQKSGETTFAISF*IRNRRPVQALVPPV Trigger: GACTGGTGGCACCAGTGCCTGTACTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 90 bp | AGAAGGAGTAATGCCAAATCTGGTGGCCTGTCCCTGGGTGGCCTGTaGGCCAGGACTATACTGGAAAGAATGACTTTGTCCTTGTCCGGC | + |
Preference number: 1 (lower is better) Translates to: RRSNAKSGGLSLGGL*ARTILERMTLSLSG Trigger: GCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGATTTGGCATTACTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207642.2 |
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3UTR CCA 90 bp | TGTTCTCCCAACCCCTCTAGCACATTCTGGTGGCCTGTCCCTGGGTaGCCTGTGGGCCAGGACTATACTGGAAAGAATGACTTTGTCCTT | + |
Preference number: 1 (lower is better) Translates to: CSPNPSSTFWWPVPG*PVGQDYTGKNDFVL Trigger: AAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAGAGGGGTTGGGAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR CCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATaGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATG | + |
Preference number: 1 (lower is better) Translates to: RRPCSELVLIMPCSV*LRPSLGMMMLAQVM Trigger: CATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR GCA 90 bp | AGGAGGCTGGTGTCGAAGAGCACCTCTGAGCACATGAAAGCCTCTTaGCCTAGGTTGATTTCCTTGCCATCTGGCAGTGTGAATTTCTTC | + |
Preference number: 1 (lower is better) Translates to: RRLVSKSTSEHMKAS*PRLISLPSGSVNFF Trigger: GAAGAAATTCACACTGCCAGATGGCAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGCTCTTCGACACCAGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR GCA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTaGTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCT | + |
Preference number: 1 (lower is better) Translates to: SGERRPCSELVLIMP*SVWLRPSLGMMMLA Trigger: AGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 90 bp | GAGGGAGGGAAGACAAGATGGAGGCACCTATCCAGGCACTATACTTaGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGA | + |
Preference number: 1 (lower is better) Translates to: EGGKTRWRHLSRHYT*HMERQLPSHRSLER Trigger: TCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR GCA 90 bp | CTGGGCTTCATGACACAGCACTGGGGCCTTAGACAGACTCAGTTATaGACTGAGTCACCAGCACCTAATTTAGAGATGTTCCCTGTCACA | + |
Preference number: 1 (lower is better) Translates to: LGFMTQHWGLRQTQL*TESPAPNLEMFPVT Trigger: TGTGACAGGGAACATCTCTAAATTAGGTGCTGGTGACTCAGTGCATAACTGAGTCTGTCTAAGGCCCCAGTGCTGTGTCATGAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 90 bp | GGAAGACAAGATGGAGGCACCTATCCAGGCACTATACTTGGCATATaGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTT | + |
Preference number: 1 (lower is better) Translates to: GRQDGGTYPGTILGI*RGSYLHTEVWRDHL Trigger: AAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR GCA 90 bp | CCAGCACCTAATTTAGAGATGTTCCCTGTCACAGTAACCACCTTGTaGTCCCTGCTGTCAGATCCCACAGTGCATCACTTCACTGTAAGA | + |
Preference number: 1 (lower is better) Translates to: PAPNLEMFPVTVTTL*SLLSDPTVHHFTVR Trigger: TCTTACAGTGAAGTGATGCACTGTGGGATCTGACAGCAGGGAGCACAAGGTGGTTACTGTGACAGGGAACATCTCTAAATTAGGTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR GCA 90 bp | GCCCTTGTTACACACTTTTACTGTCCTTCAGGAGAAAGGAGGCCTTaGTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGG | + |
Preference number: 1 (lower is better) Translates to: ALVTHFYCPSGERRP*SELVLIMPCSVWLR Trigger: CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTAAAAGTGTGTAACAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 |
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3UTR CCA 90 bp | ATTGTTCAGTTCAGGAGTACCTTCAATCAGACGGCACAGACAGAATaGTGGCCACCATCTCTTCACACATGTCTGATTCTCCAAGTCGTC | + |
Preference number: 1 (lower is better) Translates to: IVQFRSTFNQTAQTE*WPPSLHTCLILQVV Trigger: GACGACTTGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTCTGATTGAAGGTACTCCTGAACTGAACAAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 90 bp | AAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATaGTTTGTGATCCACATGTCCTTGAACAGAGGGAGGGAAGACAAG | + |
Preference number: 1 (lower is better) Translates to: KHLLNMTEGPISKYS*FVIHMSLNRGREDK Trigger: CTTGTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGCACCTCTGCTGGCTGGCCAGGTaGCACACACTGCCCCCGTGC | + |
Preference number: 2 (lower is better) Translates to: HVDPWVGSLQEAGVEEHLCWLAR*HTLPPC Trigger: GCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCA...GAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CAA 90 bp | GGCTGGCCAGGTGGCACACACTGCCCCCGTGCTCAGGAGTACATCTaGCAGCAGGCTGTGGATTCAGGGAGACTAAGCCTGGGGTGGGCA | + |
Preference number: 2 (lower is better) Translates to: GWPGGTHCPRAQEYI*QQAVDSGRLSLGWA Trigger: TGCCCACCCCAGGCTTAGTCTCCCTGAATCCACAGCCTGCTGCAAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | TCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGTTGGCTCTCCCAGGTGGCACACACTaGCCCCGTGCTCAGGAGTAC | + |
Preference number: 2 (lower is better) Translates to: SQDMMLSRVSMWIPGLALPGGTH*PRAQEY Trigger: GTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGG...GAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | GATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGTTGCCAGGTGGCACACACTaGCCCCGTGCTCAGGAGTAC | + |
Preference number: 2 (lower is better) Translates to: DFSQDMMLSRVSMWIPGLPGGTH*PRAQEY Trigger: GTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGG...CAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | ATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAATGGCCTGTCCCTGGGTaGCCTGTGGGCCAGGACTAT | + |
Preference number: 2 (lower is better) Translates to: MAKAQPRHDDVGSGDGTQWPVPG*PVGQDY Trigger: ATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCA...TTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207642.2 |
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3UTR CAA 90 bp | TCCCTGGGTGGCCTGTGGGCCAGGACTATACTGGAAAGAATGACTTaGTCCTTGTCCGGCCTCTCTGTTCCCTCCAGGCCTCCCACTAAA | + |
Preference number: 2 (lower is better) Translates to: SLGGLWARTILERMT*SLSGLSVPSRPPTK Trigger: TTTAGTGGGAGGCCTGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR-3UTR CCA 90 bp | ATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAATGTGGATCCCTGGGTTaGCTCTCTCCAGGAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: MAKAQPRHDDVGSGDGTQCGSLG*LSPGGW Trigger: CCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACA...TTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CAA 90 bp | GGTGGCCTGTGGGCCAGGACTATACTGGAAAGAATGACTTTGTCCTaGTCCGGCCTCTCTGTTCCCTCCAGGCCTCCCACTAAAAACTCC | + |
Preference number: 2 (lower is better) Translates to: GGLWARTILERMTLS*SGLSVPSRPPTKNS Trigger: GGAGTTTTTAGTGGGAGGCCTGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR-3UTR GCA 90 bp | AGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCGGAGGAAGATTGGCATaGTGGCTGGCCAGGTGGCAC | + |
Preference number: 2 (lower is better) Translates to: RPCSELVLIMPCSVWLRPGGRLA*WLARWH Trigger: GTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCC...GGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GCATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGCACCTACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 2 (lower is better) Translates to: ACGSLGWLSPGGWCRRAPTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...AGGTGCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GGGAGGGAAGACAAGATGGAGGCACCTATCCAGGCACTATACTTGGCATATGGACTCTCTCCAGGAGGCTaGTGTCGAAGAGCACCTCTG | + |
Preference number: 2 (lower is better) Translates to: GREDKMEAPIQALYLAYGLSPGG*CRRAPL Trigger: CAGAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAG...TCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGTGTGGATCCCTGGGTTaGCTCTCTCCAGGAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: GSYLHTEVWRDHLCHLFLCGSLG*LSPGGW Trigger: CCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACA...CAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GACGGCACAGACAGAATGGTGGCCACCATCTCTTCACACATGTCTGATTCTCCATCCAAGTCGTCAGACTaGCTGGCTTCGGAGTCTGCC | + |
Preference number: 2 (lower is better) Translates to: DGTDRMVATISSHMSDSPSKSSD*LASESA Trigger: GGCAGACTCCGAAGCCAGCCAGTCTGACGACTTGGA...TGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR CCA 90 bp | GGAGGGAAGACAAGATGGAGGCACCTATCCAGGCACTATACTTGGCATATGGAGGCGGCCATCTCTAGCTaGCTCTGCTGTGAAGTGGCT | + |
Preference number: 2 (lower is better) Translates to: GGKTRWRHLSRHYTWHMEAAISS*LCCEVA Trigger: AGCCACTTCACAGCAGAGCCAGCTAGAGATGGCCGC...CTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | TATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCAGACTAAGCCTGGGGTaGGCAGCGGCCATCTCTAGC | + |
Preference number: 2 (lower is better) Translates to: YGEAVTFTQKSGETTFAIRLSLG*AAAISS Trigger: GCTAGAGATGGCCGCTGCCCACCCCAGGCTTAGTCT...GATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | TCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCTCTGGGGAGGAAGATTaGCATGCTGGCTGGCCAGGT | + |
Preference number: 2 (lower is better) Translates to: SELVLIMPCSVWLRPSLGSGEED*HAGWPG Trigger: ACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGA...GCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | TCCTTGCCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTCTGGTGGCCTGTCCCTaGGTGGCCTGTGGGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: SLPSGSVNFFWKDGAEVFLVACP*VACGPG Trigger: TCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAG...AAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR-3UTR CCA 90 bp | ACTCAGTTATGCACTGAGTCACCAGCACCTAATTTAGAGATGTTCCCTGTCACACTGGTGGCCTGTCCCTaGGTGGCCTGTGGGCCAGGA | + |
Preference number: 2 (lower is better) Translates to: TQLCTESPAPNLEMFPVTLVACP*VACGPG Trigger: TCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAG...TGTGACAGGGAACATCTCTAAATTAGGTGCTGGTGACTCAGTGCATAACTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR-3UTR TCA 90 bp | CATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGCACCTCCTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTT | + |
Preference number: 2 (lower is better) Translates to: HVDPWVGSLQEAGVEEHLLTTVS*GIESGL Trigger: AAGACCTGACTCTATACCTCATGAAACTGTTGTCAG...GAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CTATACTTGGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCTGTGGATCCCTGGGTTaGCTCTCTCCAGGAGGCTGG | + |
Preference number: 2 (lower is better) Translates to: LYLAYGEAVTFTQKSGETCGSLG*LSPGGW Trigger: CCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACA...GGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CAA 90 bp | ATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCCGGAATCGTAGGCCAGTACAGGCAC | + |
Preference number: 2 (lower is better) Translates to: MERQLPSHRSLERPP*PSLSASGIVGQYRH Trigger: GTGCCTGTACTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTAAGCCATCTTTGTCTTaGGGGTCCCAGAGGCCATGC | + |
Preference number: 2 (lower is better) Translates to: ERQLPSHRSLERPPLPSLKPSLS*GSQRPC Trigger: GCATGGCCTCTGGGACCCTCAAGACAAAGATGGCTT...AAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR TCA 90 bp | TACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGCACCTCTGAGCACATaGAAGCCTCTTGCCCTAGGT | + |
Preference number: 2 (lower is better) Translates to: YLHTEVWRDHLCHLFLHPAPLST*KPLALG Trigger: ACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGC...CGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | GATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGTTGGCAGTAAGTAGAGGATaGAGGACTGGAACTGCTGTC | + |
Preference number: 2 (lower is better) Translates to: DFSQDMMLSRVSMWIPGLAVSRG*RTGTAV Trigger: GACAGCAGTTCCAGTCCTGCATCCTCTACTTACTGC...CAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR CCA 90 bp | CCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGATGCTGTCTCCTGACTTaGATCCCTGAGGCCGTGACT | + |
Preference number: 2 (lower is better) Translates to: PRHDDVGSGDGTQNPPVRCCLLT*IPEAVT Trigger: AGTCACGGCCTCAGGGATCCAAGTCAGGAGACAGCA...TCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR CCA 90 bp | TCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGTTGGCTCTCACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 2 (lower is better) Translates to: SQDMMLSRVSMWIPGLALTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...GAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GCATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGCACCTAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: ACGSLGWLSPGGWCRRAPSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...AGGTGCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GGTCCAGTAGTCTCCGACGGCATCACCTACTGTCGAGGAGCTGCAGTGGTGCCAAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: GPVVSDGITYCRGAAVVPSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...TGGCACCACTGCAGCTCCTCGACAGTAGGTGATGCCGTCGGAGACTACTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR CCA 90 bp | CAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCACTCTCTCCAGGAGGCTaGTGTCGAAGAGCACCTCTG | + |
Preference number: 2 (lower is better) Translates to: QLPSHRSLERPPLPSLSALSPGG*CRRAPL Trigger: CAGAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAG...TGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | TTGGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTCTCTCTCCAGGAGGCTaGTGTCGAAGAGCACCTCTG | + |
Preference number: 2 (lower is better) Translates to: LAYGEAVTFTQKSGETTFLSPGG*CRRAPL Trigger: CAGAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAG...AAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CTATACTTGGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCGCGGCCATCTCTAGCTaGCTCTGCTGTGAAGTGGCT | + |
Preference number: 2 (lower is better) Translates to: LYLAYGEAVTFTQKSGETAAISS*LCCEVA Trigger: AGCCACTTCACAGCAGAGCCAGCTAGAGATGGCCGC...GGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | AGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTTCTGGGGAGGAAGATTaGCATGCTGGCTGGCCAGGT | + |
Preference number: 2 (lower is better) Translates to: RQLPSHRSLERPPLPSLSSGEED*HAGWPG Trigger: ACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGA...AGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | GTGGCCACCATCTCTTCACACATGTCTGATTCTCCAAGTCGTCAGACTGGCTGGCTATACTGGAAAGAATaGCTTTGTCCTTGTCCGGCC | + |
Preference number: 2 (lower is better) Translates to: VATISSHMSDSPSRQTGWLYWKE*LCPCPA Trigger: GGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAG...CCAGCCAGTCTGACGACTTGGAGAATCAGACATGTGTGAAGAGATGGTGGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR-3UTR GCA 90 bp | CCAATTTCCAAATACTCATGGTTTGTGATCCACATGTCCTTGAACAGAGGGAGGGGAGGAAGATTGGCATaGTGGCTGGCCAGGTGGCAC | + |
Preference number: 2 (lower is better) Translates to: PISKYSWFVIHMSLNRGRGGRLA*WLARWH Trigger: GTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCC...CCTCCCTCTGTTCAAGGACATGTGGATCACAAACCATGAGTATTTGGAAATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GCTGCTTTGTTCATTTATTGTTCAGTTCAGGAGTACCTTCAATCAGACGGCACATGGCCTGTCCCTGGGTaGCCTGTGGGCCAGGACTAT | + |
Preference number: 2 (lower is better) Translates to: AALFIYCSVQEYLQSDGTWPVPG*PVGQDY Trigger: ATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCA...TGTGCCGTCTGATTGAAGGTACTCCTGAACTGAACAATAAATGAACAAAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR CAA 90 bp | TTTTACTGTCCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTaGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATG | + |
Preference number: 2 (lower is better) Translates to: FYCPSGERRPCSELV*IMPCSVWLRPSLGM Trigger: CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | GGGCCAATTTCCAAATACTCATGGTTTGTGATCCACATGTCCTTGAACAGAGGGCAAGTGCAGGTGTCTTaGGGGATGGTCAGACCCATG | + |
Preference number: 2 (lower is better) Translates to: GPISKYSWFVIHMSLNRGQVQVS*GMVRPM Trigger: CATGGGTCTGACCATCCCTCAAGACACCTGCACTTG...CCCTCTGTTCAAGGACATGTGGATCACAAACCATGAGTATTTGGAAATTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR TCA 90 bp | GACGGCACAGACAGAATGGTGGCCACCATCTCTTCACACATGTCTGATTCTCCATGCCATCTGGCAGTGTaGATTTCTTCTGGAAGGATG | + |
Preference number: 2 (lower is better) Translates to: DGTDRMVATISSHMSDSPCHLAV*ISSGRM Trigger: CATCCTTCCAGAAGAAATTCACACTGCCAGATGGCA...TGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR TCA 90 bp | ATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGCATCTTCTGCACCTCTGAGCACATaGAAGCCTCTTGCCCTAGGT | + |
Preference number: 2 (lower is better) Translates to: MMLAQVMEPKIHQSEASSAPLST*KPLALG Trigger: ACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGC...AGAAGATGCTTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | CTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGATCCACATGGGGTCCCAGAGGCCATaGCCTGTCCTGGTGGTGTGG | + |
Preference number: 2 (lower is better) Translates to: LNMTEGPISKYSWFVIHMGSQRP*PVLVVW Trigger: CCACACCACCAGGACAGGGCATGGCCTCTGGGACCC...CATGTGGATCACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR CCA 90 bp | TCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGTTGGCTCTCAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: SQDMMLSRVSMWIPGLALSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...GAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | ATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGCATCTTCTGGAGGGAAGACAAGATaGAGGCACCTATCCAGGCAC | + |
Preference number: 2 (lower is better) Translates to: MMLAQVMEPKIHQSEASSGGKTR*RHLSRH Trigger: GTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCC...AGAAGATGCTTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CAA 90 bp | TCACCAGCACCTAATTTAGAGATGTTCCCTGTCACAGTAACCACCTaGTGCTCCCTGCTGTCAGATCCCACAGTGCATCACTTCACTGTA | + |
Preference number: 2 (lower is better) Translates to: SPAPNLEMFPVTVTT*CSLLSDPTVHHFTV Trigger: TACAGTGAAGTGATGCACTGTGGGATCTGACAGCAGGGAGCACAAGGTGGTTACTGTGACAGGGAACATCTCTAAATTAGGTGCTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR TCA 90 bp | GAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTAAGGATAGCCATTCATaGCAGGCACGAAGTAGGTCA | + |
Preference number: 2 (lower is better) Translates to: ERQLPSHRSLERPPLPSLKDSHS*QARSRS Trigger: TGACCTACTTCGTGCCTGTCATGAATGGCTATCCTT...AAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | AGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCGTAGGCCAGCATGTTGTAGTCCAGTaGCACATAGCTGTATTTGTC | + |
Preference number: 2 (lower is better) Translates to: SLERPPLPSLSASGIVGQHVVVQ*HIAVFV Trigger: GACAAATACAGCTATGTGGCACTGGACTACAACATG...CTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | CCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAATCTCTAGCTGGCTCTaGTGTGAAGTGGCTGTTCTA | + |
Preference number: 2 (lower is better) Translates to: PRHDDVGSGDGTQNPPVRISSWL*CEVAVL Trigger: TAGAACAGCCACTTCACAGCAGAGCCAGCTAGAGAT...TCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | AGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 2 (lower is better) Translates to: RPCSELVLIMPCSVWLRPTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...GGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | TTGGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTTGCCATCTGGCAGTGTaGATTTCTTCTGGAAGGATG | + |
Preference number: 2 (lower is better) Translates to: LAYGEAVTFTQKSGETTFCHLAV*ISSGRM Trigger: CATCCTTCCAGAAGAAATTCACACTGCCAGATGGCA...AAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR GCA 90 bp | GCTGCTTTGTTCATTTATTGTTCAGTTCAGGAGTACCTTCAATCAGACGGCACAGCTGGCTTCGGAGTCTaGCTCAGAAGGTCCAGTAGT | + |
Preference number: 2 (lower is better) Translates to: AALFIYCSVQEYLQSDGTAGFGV*LRRSSS Trigger: ACTACTGGACCTTCTGAGGCAGACTCCGAAGCCAGC...TGTGCCGTCTGATTGAAGGTACTCCTGAACTGAACAATAAATGAACAAAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR CCA 90 bp | GTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCGGATGTACTCGAGAGGTGTCTTGAGGGATaGTCAGACCCATGTGTTACT | + |
Preference number: 2 (lower is better) Translates to: VVQCHIAVFVFQVSDVLERCLEG*SDPCVT Trigger: AGTAACACATGGGTCTGACCATCCCTCAAGACACCT...CTCGAGTACATCCGAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR CCA 90 bp | CCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 2 (lower is better) Translates to: PRHDDVGSGDGTQNPPVRTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...TCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | ATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGCATCTTCTTGCCATCTGGCAGTGTaGATTTCTTCTGGAAGGATG | + |
Preference number: 2 (lower is better) Translates to: MMLAQVMEPKIHQSEASSCHLAV*ISSGRM Trigger: CATCCTTCCAGAAGAAATTCACACTGCCAGATGGCA...AGAAGATGCTTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CTATACTTGGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCCTATGTCCAGCTTGGTaGTTGACAAGTGCAAAGGAT | + |
Preference number: 2 (lower is better) Translates to: LYLAYGEAVTFTQKSGETLCPAW*LTSAKD Trigger: ATCCTTTGCACTTGTCAACCACCAAGCTGGACATAG...GGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GAAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGATTGGCATGCTGGCTaGCCAGGTGGCACACACTGC | + |
Preference number: 2 (lower is better) Translates to: EASSKYDRRANFQILMVCDWHAG*PGGTHC Trigger: GCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATC...ACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCGCTATGTCCAGCTTGGTaGTTGACAAGTGCAAAGGAT | + |
Preference number: 2 (lower is better) Translates to: HLHVVVQCHIAVFVFQVSLCPAW*LTSAKD Trigger: ATCCTTTGCACTTGTCAACCACCAAGCTGGACATAG...CGAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | GGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: GSYLHTEVWRDHLCHLFLSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...CAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | ATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGCATCTTCTAAACTTCACACAGAAGTCTaGAGAGACCACCTTTGCCAT | + |
Preference number: 2 (lower is better) Translates to: MLAQVMEPKIHQSEASSKLHTEV*RDHLCH Trigger: ATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAG...TTTAGAAGATGCTTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | AGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGTTTCGAATAGGATCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 2 (lower is better) Translates to: RQLPSHRSLERPPLPSLSVSNRI*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGATCCTATTCGAAAC...AGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 |
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3UTR-3UTR GCA 90 bp | ATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGCATCTTCTAAACACATGAAAGCCTCTTaGCCTAGGTTGATTTCCTTG | + |
Preference number: 2 (lower is better) Translates to: MLAQVMEPKIHQSEASSKHMKAS*PRLISL Trigger: CAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTG...TTTAGAAGATGCTTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | ATTTCCTTGCCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTCTATGTCCAGCTTGGTaGTTGACAAGTGCAAAGGAT | + |
Preference number: 2 (lower is better) Translates to: ISLPSGSVNFFWKDGAEVLCPAW*LTSAKD Trigger: ATCCTTTGCACTTGTCAACCACCAAGCTGGACATAG...AACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAAGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | TCCTTGCCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 2 (lower is better) Translates to: SLPSGSVNFFWKDGAEVFTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...AAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | CAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCAAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 2 (lower is better) Translates to: QLPSHRSLERPPLPSLSASVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...TGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CCA 90 bp | AAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGGGAGGGAAGACAAGATaGAGGCACCTATCCAGGCAC | + |
Preference number: 2 (lower is better) Translates to: KHLLNMTEGPISKYSWFVGGKTR*RHLSRH Trigger: GTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCC...CACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | CATAGCTGTATTTGTCTTTCAGGTCTCGGATGTACTCGAGGTCAGCTATGGTCTGTTTCGAATAGGATCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 2 (lower is better) Translates to: HSCICLSGLGCTRGQLWSVSNRI*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGATCCTATTCGAAAC...AGACCATAGCTGACCTCGAGTACATCCGAGACCTGAAAGACAAATACAGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 |
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3UTR-3UTR TCA 90 bp | CAAATACTCATGGTTTGTGATCCACATGTCCTTGAACAGAGGGAGGGAAGACAACTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTT | + |
Preference number: 2 (lower is better) Translates to: QILMVCDPHVLEQREGRQLTTVS*GIESGL Trigger: AAGACCTGACTCTATACCTCATGAAACTGTTGTCAG...TTGTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCACAAACCATGAGTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | ACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCCTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTT | + |
Preference number: 2 (lower is better) Translates to: TSPCCSPVPHSCICLSGLLTTVS*GIESGL Trigger: AAGACCTGACTCTATACCTCATGAAACTGTTGTCAG...GAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR TCA 90 bp | ATCCACCAGTCAGAAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTATACTGGAAAGAATaGCTTTGTCCTTGTCCGGCC | + |
Preference number: 2 (lower is better) Translates to: IHQSEASSKYDRRANFQILYWKE*LCPCPA Trigger: GGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAG...TATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTTCTGACTGGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207642.2 |
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3UTR-3UTR GCA 90 bp | AAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGCATGTTGTAGTCCAGTaGCACATAGCTGTATTTGTC | + |
Preference number: 2 (lower is better) Translates to: KHLLNMTEGPISKYSWFVHVVVQ*HIAVFV Trigger: GACAAATACAGCTATGTGGCACTGGACTACAACATG...CACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | GCATGCTGGCTGGCCAGGTGGCACACACTGCCCCCGTaGTCAGGAGTACATCTTGCAGCAGGCTGTGGATTC | + |
Preference number: 3 (lower is better) Translates to: ACWLARWHTLPP*SGVHLAAGCGF Trigger: GAATCCACAGCCTGCTGCAAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | CGAATAGGATCTGGGGAGGAAGATTGGCATGCTGGCTaGCCAGGTGGCACACACTGCCCCCGTGCTCAGGAG | + |
Preference number: 3 (lower is better) Translates to: RIGSGEEDWHAG*PGGTHCPRAQE Trigger: CTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | GAAGATTGGCATGCTGGCTGGCCAGGTGGCACACACTaGCCCCGTGCTCAGGAGTACATCTTGCAGCAGGCT | + |
Preference number: 3 (lower is better) Translates to: EDWHAGWPGGTH*PRAQEYILQQA Trigger: AGCCTGCTGCAAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | AGCCTGGGGTGGGCAGCGGCCATCTCTAGCTGGCTCTaGTGTGAAGTGGCTGTTCTAGCTTCATTCTGTGGC | + |
Preference number: 3 (lower is better) Translates to: SLGWAAAISSWL*CEVAVLASFCG Trigger: GCCACAGAATGAAGCTAGAACAGCCACTTCACAGCAGAGCCAGCTAGAGATGGCCGCTGCCCACCCCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | GGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTaGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAG | + |
Preference number: 3 (lower is better) Translates to: GHDALQGEHVDP*VGSLQEAGVEE Trigger: CTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | ATCTGGGGAGGAAGATTGGCATGCTGGCTGGCCAGGTaGCACACACTGCCCCCGTGCTCAGGAGTACATCTT | + |
Preference number: 3 (lower is better) Translates to: IWGGRLACWLAR*HTLPPCSGVHL Trigger: AAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | GTTTCGAATAGGATCTGGGGAGGAAGATTGGCATGCTaGCTGGCCAGGTGGCACACACTGCCCCCGTGCTCA | + |
Preference number: 3 (lower is better) Translates to: VSNRIWGGRLAC*LARWHTLPPCS Trigger: TGAGCACGGGGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCGAAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | CAGTCTTGTTCTCCCAACCCCTCTAGCACATTCTGGTaGCCTGTCCCTGGGTGGCCTGTGGGCCAGGACTAT | + |
Preference number: 3 (lower is better) Translates to: QSCSPNPSSTFW*PVPGWPVGQDY Trigger: ATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAGAGGGGTTGGGAGAACAAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | GTCTCCGACGGCATCACCTACTGTCGAGGAGCTGCAGTGGTGCCAAGCCTCTACAGAATGACTTTGTCCTaGTCCGGCCTCTCTGTTCCC | + |
Preference number: 3 (lower is better) Translates to: VSDGITYCRGAAVVPSLYRMTLS*SGLSVP Trigger: GGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCT...GTAGAGGCTTGGCACCACTGCAGCTCCTCGACAGTAGGTGATGCCGTCGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR GCA 72 bp | AGTAGTCTCCGACGGCATCACCTACTGTCGAGGAGCTaGAGTGGTGCCAAGCCTCTACCTGGGCTTCATGAC | + |
Preference number: 3 (lower is better) Translates to: SSLRRHHLLSRS*SGAKPLPGLHD Trigger: GTCATGAAGCCCAGGTAGAGGCTTGGCACCACTGCAGCTCCTCGACAGTAGGTGATGCCGTCGGAGACTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | TTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTaGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTG | + |
Preference number: 3 (lower is better) Translates to: FSQDMMLSRVSM*IPGLALSRRLV Trigger: CACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AGGGTGAGCATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGCTGGAAAGAATGACTTaGTCCTTGTCCGGCCTCTCT | + |
Preference number: 3 (lower is better) Translates to: RVSMWIPGLALSRRLVSKLERMT*SLSGLS Trigger: AGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAG...CTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGCTCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207642.2 |
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3UTR GCA 72 bp | ATTCTCCAAGTCGTCAGACTGGCTGGCTTCGGAGTCTaGCTCAGAAGGTCCAGTAGTCTCCGACGGCATCAC | + |
Preference number: 3 (lower is better) Translates to: ILQVVRLAGFGV*LRRSSSLRRHH Trigger: GTGATGCCGTCGGAGACTACTGGACCTTCTGAGGCAGACTCCGAAGCCAGCCAGTCTGACGACTTGGAGAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | TACAGGGCGGGGAAGTTGAAGGTTTCGAATAGGATCTaGGGAGGAAGATTGGCATGCTGGCTGGCCAGGTGG | + |
Preference number: 3 (lower is better) Translates to: YRAGKLKVSNRI*GGRLACWLARW Trigger: CCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | AACCCCTCTAGCACATTCTGGTGGCCTGTCCCTGGGTaGCCTGTGGGCCAGGACTATACTGGAAAGAATGAC | + |
Preference number: 3 (lower is better) Translates to: NPSSTFWWPVPG*PVGQDYTGKND Trigger: GTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAGAGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | TCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATCTGGGGAGGAAGATaGGCATGCTGGCTGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: SELVLIMPCSVWLRPSLGIWGGR*ACWLAR Trigger: CCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGAT...GCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR TCA 72 bp | GCAGGACTGGAACTGCTGTCTCCTGACTTGGATCCCTaGGGCCGTGACTATGGAGGTACTGAAGAGCAGCAA | + |
Preference number: 3 (lower is better) Translates to: AGLELLSPDLDP*GRDYGGTEEQQ Trigger: TTGCTGCTCTTCAGTACCTCCATAGTCACGGCCTCAGGGATCCAAGTCAGGAGACAGCAGTTCCAGTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR TCA 72 bp | GAGCTGCAGTGGTGCCAAGCCTCTACCTGGGCTTCATaGCACAGCACTGGGGCCTTAGACAGACTCAGTTAT | + |
Preference number: 3 (lower is better) Translates to: ELQWCQASTWAS*HSTGALDRLSY Trigger: ATAACTGAGTCTGTCTAAGGCCCCAGTGCTGTGTCATGAAGCCCAGGTAGAGGCTTGGCACCACTGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR TCA 72 bp | TGGGTGGCCTGTGGGCCAGGACTATACTGGAAAGAATaGCTTTGTCCTTGTCCGGCCTCTCTGTTCCCTCCA | + |
Preference number: 3 (lower is better) Translates to: WVACGPGLYWKE*LCPCPASLFPP Trigger: TGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | CTAGCACATTCTGGTGGCCTGTCCCTGGGTGGCCTGTaGGCCAGGACTATACTGGAAAGAATGACTTTGTCC | + |
Preference number: 3 (lower is better) Translates to: LAHSGGLSLGGL*ARTILERMTLS Trigger: GGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGAATGTGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | CCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAATGTGGATCCCTGGGTaGGCTCTCTCCAGGAGGCTG | + |
Preference number: 3 (lower is better) Translates to: PSGERRPCSELVLIMPCSMWIPG*ALSRRL Trigger: CAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACAT...TGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | CCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAATGTGGATCCCTGGGTaGGCTCTCTCCAGGAGGCTG | + |
Preference number: 3 (lower is better) Translates to: PRHDDVGSGDGTQNPPVRMWIPG*ALSRRL Trigger: CAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACAT...TCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR TCA 72 bp | GAGGTTCTGCCAGAAGCGATAAGGGAGAGGACGGCTTaGTTAGCTGTGTACAGGGCGGGGAAGTTGAAGGTT | + |
Preference number: 3 (lower is better) Translates to: EVLPEAIRERTA*LAVYRAGKLKV Trigger: AACCTTCAACTTCCCCGCCCTGTACACAGCTAATCAAGCCGTCCTCTCCCTTATCGCTTCTGGCAGAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | CAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTaGATCCGGAATCGTAGGCCAGTACAGGCACTGGTG | + |
Preference number: 3 (lower is better) Translates to: QKSGETTFAISF*IRNRRPVQALV Trigger: CACCAGTGCCTGTACTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | GTGCCAAGCCTCTACCTGGGCTTCATGACACAGCACTaGGGCCTTAGACAGACTCAGTTATGCACTGAGTCA | + |
Preference number: 3 (lower is better) Translates to: VPSLYLGFMTQH*GLRQTQLCTES Trigger: TGACTCAGTGCATAACTGAGTCTGTCTAAGGCCCCAGTGCTGTGTCATGAAGCCCAGGTAGAGGCTTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | GTAGAAGGAGTAATGCCAAATCTGGTGGCCTGTCCCTaGGTGGCCTGTGGGCCAGGACTATACTGGAAAGAA | + |
Preference number: 3 (lower is better) Translates to: VEGVMPNLVACP*VACGPGLYWKE Trigger: TTCTTTCCAGTATAGTCCTGGCCCACAGGCCACCCAGGGACAGGCCACCAGATTTGGCATTACTCCTTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207642.2 |
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3UTR-3UTR CAA 90 bp | AGGCACGAAGTAGGTCATCCCATCTCCAGATTCAATAGCTGTTCCAGAGGTTCTATCTGGGGAGGAAGATaGGCATGCTGGCTGGCCAGG | + |
Preference number: 3 (lower is better) Translates to: RHEVGHPISRFNSCSRGSIWGGR*ACWLAR Trigger: CCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGAT...AGAACCTCTGGAACAGCTATTGAATCTGGAGATGGGATGACCTACTTCGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR TCA 72 bp | AGACAGAATGGTGGCCACCATCTCTTCACACATGTCTaGTTCTCCAAGTCGTCAGACTGGCTGGCTTCGGAG | + |
Preference number: 3 (lower is better) Translates to: RQNGGHHLFTHV*FSKSSDWLASE Trigger: CTCCGAAGCCAGCCAGTCTGACGACTTGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR GCA 72 bp | GTGTCGAAGAGCACCTCTGAGCACATGAAAGCCTCTTaGCCTAGGTTGATTTCCTTGCCATCTGGCAGTGTG | + |
Preference number: 3 (lower is better) Translates to: VSKSTSEHMKAS*PRLISLPSGSV Trigger: CACACTGCCAGATGGCAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGCTCTTCGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTaGTCAGTATGGCTAAGGCCCAGCCTAGGCATGATG | + |
Preference number: 3 (lower is better) Translates to: RRPCSELVLIMP*SVWLRPSLGMM Trigger: CATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | GCATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAAGAGCACCTTCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 3 (lower is better) Translates to: ACGSLGWLSPGGWCRRAPSNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...AGGTGCTCTTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | CAGGGTGAGCATGTGGATCCCTGGGTTGGCTCTCTCCAGGAGGCTGGTGTCGAATCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 3 (lower is better) Translates to: QGEHVDPWVGSLQEAGVESNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...TTCGACACCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACATGCTCACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AAGTTGAAGGTTTCGAATAGGATCTGGGGAGGAAGATTGGCATGCTGGCTGGCCGCTCAGGAGTACATCTaGCAGCAGGCTGTGGATTCA | + |
Preference number: 3 (lower is better) Translates to: KLKVSNRIWGGRLACWLAAQEYI*QQAVDS Trigger: TGAATCCACAGCCTGCTGCAAGATGTACTCCTGAGC...GGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCGAAACCTTCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | TCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 3 (lower is better) Translates to: SHRSLERPPLPSLSASGILFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...GATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 |
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3UTR CCA 72 bp | GGCATATGGAGAGGCAGTTACCTTCACACAGAAGTCTaGAGAGACCACCTTTGCCATCTCTTTCTGCATCCG | + |
Preference number: 3 (lower is better) Translates to: GIWRGSYLHTEV*RDHLCHLFLHP Trigger: CGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | CACTGTAAGAGTCTCAGGGACCTTCACACAGAAGTCTaGAGAGACCACCTTTGCCATCTCTTTCTGCATCCG | + |
Preference number: 3 (lower is better) Translates to: HCKSLRDLHTEV*RDHLCHLFLHP Trigger: CGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTCCCTGAGACTCTTACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207235.2 |
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3UTR-3UTR CAA 90 bp | CTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGTACAGGGCGGGGAAGTaGAAGGTTTCGAATAGGATC | + |
Preference number: 3 (lower is better) Translates to: LVLIMPCSVWLRPSLGMMYRAGK*KVSNRI Trigger: GATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA...CATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCTCAGGAGTACATCTaGCAGCAGGCTGTGGATTCA | + |
Preference number: 3 (lower is better) Translates to: RQLPSHRSLERPPLPSLSAQEYI*QQAVDS Trigger: TGAATCCACAGCCTGCTGCAAGATGTACTCCTGAGC...AGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | GAGGGAGTGGTAGAAGGAGTAATGCCAAATCTCAAGTaGAGGTGTCTTGAGGGATGGTCAGACCCATGTGTT | + |
Preference number: 3 (lower is better) Translates to: EGVVEGVMPNLK*RCLEGWSDPCV Trigger: AACACATGGGTCTGACCATCCCTCAAGACACCTGCACTTGAGATTTGGCATTACTCCTTCTACCACTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR CCA 72 bp | TGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATaGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCT | + |
Preference number: 3 (lower is better) Translates to: CSELVLIMPCSV*LRPSLGMMMLA Trigger: AGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | CATAGCTGTATTTGTCTTTCAGGTCTCGGATGTACTCGAGGTCAGCTATGGTCTCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 3 (lower is better) Translates to: HSCICLSGLGCTRGQLWSLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...AGACCATAGCTGACCTCGAGTACATCCGAGACCTGAAAGACAAATACAGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 |
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3UTR-3UTR CAA 90 bp | CAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATACAGGGCGGGGAAGTaGAAGGTTTCGAATAGGATC | + |
Preference number: 3 (lower is better) Translates to: QLPSHRSLERPPLPSLSAYRAGK*KVSNRI Trigger: GATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA...TGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR TCA 72 bp | GCTTGGTGGTTGACAAGTGCAAAGGATAGCCATTCATaGCAGGCACGAAGTAGGTCATCCCATCTCCAGATT | + |
Preference number: 3 (lower is better) Translates to: AWWLTSAKDSHS*QARSRSSHLQI Trigger: AATCTGGAGATGGGATGACCTACTTCGTGCCTGTCATGAATGGCTATCCTTTGCACTTGTCAACCACCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | AATTTAGAGATGTTCCCTGTCACAGTAACCACCTTGTaGTCCCTGCTGTCAGATCCCACAGTGCATCACTTC | + |
Preference number: 3 (lower is better) Translates to: NLEMFPVTVTTL*SLLSDPTVHHF Trigger: GAAGTGATGCACTGTGGGATCTGACAGCAGGGAGCACAAGGTGGTTACTGTGACAGGGAACATCTCTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | AGGAGTACCTTCAATCAGACGGCACAGACAGAATGGTaGCCACCATCTCTTCACACATGTCTGATTCTCCAA | + |
Preference number: 3 (lower is better) Translates to: RSTFNQTAQTEW*PPSLHTCLILQ Trigger: TTGGAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTCTGATTGAAGGTACTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR CCA 72 bp | TTCAGGAGTACCTTCAATCAGACGGCACAGACAGAATaGTGGCCACCATCTCTTCACACATGTCTGATTCTC | + |
Preference number: 3 (lower is better) Translates to: FRSTFNQTAQTE*WPPSLHTCLIL Trigger: GAGAATCAGACATGTGTGAAGAGATGGTGGCCACCATTCTGTCTGTGCCGTCTGATTGAAGGTACTCCTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | ACATGTCTGATTCTCCAAGTCGTCAGACTGGCTGGCTTCGGAGTCTGCCTCAGAATGGTGCTGAAGTTTTaGACATCTCCATGTTGTAGT | + |
Preference number: 3 (lower is better) Translates to: TCLILQVVRLAGFGVCLRMVLKF*TSPCCS Trigger: ACTACAACATGGAGATGTCAAAAACTTCAGCACCAT...TCTGAGGCAGACTCCGAAGCCAGCCAGTCTGACGACTTGGAGAATCAGACATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | CTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAACCTAGGTTGATTTCCTaGCCATCTGGCAGTGTGAAT | + |
Preference number: 3 (lower is better) Translates to: LGMMMLAQVMEPKIHQSEPRLIS*PSGSVN Trigger: ATTCACACTGCCAGATGGCAAGGAAATCAACCTAGG...TTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | CAAATACTCATGGTTTGTGATCCACATGTCCTTGAACAGAGGGAGGGAAGACAACTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCC | + |
Preference number: 3 (lower is better) Translates to: QILMVCDPHVLEQREGRQLERPP*PSLSAS Trigger: GGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAG...TTGTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCACAAACCATGAGTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | ACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCAGAATGACTTTGTCCTaGTCCGGCCTCTCTGTTCCC | + |
Preference number: 3 (lower is better) Translates to: TSPCCSPVPHSCICLSGLRMTLS*SGLSVP Trigger: GGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCT...GAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR-3UTR CAA 90 bp | TCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGATCCAATGTGGATCCCTGGGTaGGCTCTCTCCAGGAGGCTG | + |
Preference number: 3 (lower is better) Translates to: SSKYDRRANFQILMVCDPMWIPG*ALSRRL Trigger: CAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACAT...TGGATCACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | CCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTGACATCCTGGAAAGAATGACTTaGTCCTTGTCCGGCCTCTCT | + |
Preference number: 3 (lower is better) Translates to: PSGSVNFFWKDGAEVFDILERMT*SLSGLS Trigger: AGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAG...GATGTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR TCA 72 bp | TACAGGCACTGGTGCCACCAGTCAGTACGATATAATTaGATAGAGTCCTCTGGTGGGATTTCTCACAGGACA | + |
Preference number: 3 (lower is better) Translates to: YRHWCHQSVRYN*IESSGGISHRT Trigger: TGTCCTGTGAGAAATCCCACCAGAGGACTCTATTCAATTATATCGTACTGACTGGTGGCACCAGTGCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | AAGACAAGATGGAGGCACCTATCCAGGCACTATACTTaGCATATGGAGAGGCAGTTACCTTCACACAGAAGT | + |
Preference number: 3 (lower is better) Translates to: KTRWRHLSRHYT*HMERQLPSHRS Trigger: ACTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | GGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGTCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 3 (lower is better) Translates to: GSYLHTEVWRDHLCHLFLSNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...CAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR GCA 72 bp | ACACACTTTTACTGTCCTTCAGGAGAAAGGAGGCCTTaGTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTA | + |
Preference number: 3 (lower is better) Translates to: THFYCPSGERRP*SELVLIMPCSV Trigger: TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTAAAAGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | ATCCACCAGTCAGAAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATATCAAGTGCAGGTGTCTaGAGGGATGGTCAGACCCAT | + |
Preference number: 3 (lower is better) Translates to: IHQSEASSKYDRRANFQISSAGV*RDGQTH Trigger: ATGGGTCTGACCATCCCTCAAGACACCTGCACTTGA...TATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTTCTGACTGGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR-3UTR CAA 90 bp | TCATGGTTTGTGATCCACATGTCCTTGAACAGAGGGAGGGAAGACAAGATGGAGATGGTGCTGAAGTTTTaGACATCTCCATGTTGTAGT | + |
Preference number: 3 (lower is better) Translates to: SWFVIHMSLNRGREDKMEMVLKF*TSPCCS Trigger: ACTACAACATGGAGATGTCAAAAACTTCAGCACCAT...CTCCATCTTGTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCACAAACCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | ACCAGTCAGAAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCACTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCC | + |
Preference number: 3 (lower is better) Translates to: TSQKHLLNMTEGPISKYSLERPP*PSLSAS Trigger: GGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAG...TGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTTCTGACTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR TCA 72 bp | TCTCTAACACATTCCCATTGTCTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTTGGCCAGCTATGTCCA | + |
Preference number: 3 (lower is better) Translates to: SLTHSHCLTTVS*GIESGLGQLCP Trigger: TGGACATAGCTGGCCAAGACCTGACTCTATACCTCATGAAACTGTTGTCAGACAATGGGAATGTGTTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGCTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCC | + |
Preference number: 3 (lower is better) Translates to: KHLLNMTEGPISKYSWFVLERPP*PSLSAS Trigger: GGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAG...CACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CCA 72 bp | TTGATTTCCTTGCCATCTGGCAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTTTTTGACATCTCCATG | + |
Preference number: 3 (lower is better) Translates to: LISLPSGSVNFF*KDGAEVFDISM Trigger: CATGGAGATGTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAAGGAAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | ACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCTCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 3 (lower is better) Translates to: TSPCCSPVPHSCICLSGLSNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...GAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | TTTTTGACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAAGGGAGGAAAGGGTTTaGTTGGTGAATACTTGCTGG | + |
Preference number: 3 (lower is better) Translates to: FLTSPCCSPVPHSCICLSREERV*LVNTCW Trigger: CCAGCAAGTATTCACCAACAAAACCCTTTCCTCCCT...TGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGAGGGAGGAAAGGGTTTaGTTGGTGAATACTTGCTGG | + |
Preference number: 3 (lower is better) Translates to: KHLLNMTEGPISKYSWFVREERV*LVNTCW Trigger: CCAGCAAGTATTCACCAACAAAACCCTTTCCTCCCT...CACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR-3UTR CAA 90 bp | AAGTTTTTGACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTGAGGAAAGGGTTTTGTaGGTGAATACTTGCTGGTCA | + |
Preference number: 3 (lower is better) Translates to: KFLTSPCCSPVPHSCICLEERVL*VNTCWS Trigger: TGACCAGCAAGTATTCACCAACAAAACCCTTTCCTC...AAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGTCAAAAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208761.2 |
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3UTR CAA 72 bp | GGTGGCACACACTGCCCCCGTGCTCAGGAGTACATCTaGCAGCAGGCTGTGGATTCAGGGAGACTAAGCCTG | + |
Preference number: 4 (lower is better) Translates to: GGTHCPRAQEYI*QQAVDSGRLSL Trigger: CAGGCTTAGTCTCCCTGAATCCACAGCCTGCTGCAAGATGTACTCCTGAGCACGGGGGCAGTGTGTGCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | GAAGGTCCAGTAGTCTCCGACGGCATCACCTACTGTCGAGGAGCTGCAGTGGTGTCATTTTCCCGAGGATaGTGGGGAAGACAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: EGPVVSDGITYCRGAAVVSFSRG*WGRQPG Trigger: CCCAGGCTGTCTTCCCCACCATCCTCGGGAAAATGA...CACCACTGCAGCTCCTCGACAGTAGGTGATGCCGTCGGAGACTACTGGACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208625.2 |
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CDS-3UTR CCA 90 bp | GCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCATGTGGATCCCTGGGTTaGCTCTCTCCAGGAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: AQPRHDDVGSGDGTQNPPCGSLG*LSPGGW Trigger: CCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACA...TGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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3UTR CAA 72 bp | GGCCTGTGGGCCAGGACTATACTGGAAAGAATGACTTaGTCCTTGTCCGGCCTCTCTGTTCCCTCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: GLWARTILERMT*SLSGLSVPSRP Trigger: AGGCCTGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCACAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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3UTR CAA 72 bp | AAGTTGAAGGTTTCGAATAGGATCTGGGGAGGAAGATaGGCATGCTGGCTGGCCAGGTGGCACACACTGCCC | + |
Preference number: 4 (lower is better) Translates to: KLKVSNRIWGGR*ACWLARWHTLP Trigger: GGGCAGTGTGTGCCACCTGGCCAGCCAGCATGCCAATCTTCCTCCCCAGATCCTATTCGAAACCTTCAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208038.2 ENSMUST00000208761.2 |
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3UTR CAA 72 bp | TGGGCCAGGACTATACTGGAAAGAATGACTTTGTCCTaGTCCGGCCTCTCTGTTCCCTCCAGGCCTCCCACT | + |
Preference number: 4 (lower is better) Translates to: WARTILERMTLS*SGLSVPSRPPT Trigger: AGTGGGAGGCCTGGAGGGAACAGAGAGGCCGGACAAGGACAAAGTCATTCTTTCCAGTATAGTCCTGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207642.2 ENSMUST00000208625.2 |
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CDS-3UTR TCA 90 bp | GCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGGGGGCCTGAGTTCCTaGAAAGCCCACCTTACTGAA | + |
Preference number: 4 (lower is better) Translates to: AQPRHDDVGSGDGTQNPPGGLSS*KAHLTE Trigger: TTCAGTAAGGTGGGCTTTTCAGGAACTCAGGCCCCC...TGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | TGGTGGGATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTGGGGGCCTGAGTTCCTaGAAAGCCCACCTTACTGAA | + |
Preference number: 4 (lower is better) Translates to: WWDFSQDMMLSRVSMWIPGGLSS*KAHLTE Trigger: TTCAGTAAGGTGGGCTTTTCAGGAACTCAGGCCCCC...AGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | GGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCGTAGGCCAGTACAGGGGGGCCTGAGTTCCTaGAAAGCCCACCTTACTGAA | + |
Preference number: 4 (lower is better) Translates to: GETTFAISFCIRNRRPVQGGLSS*KAHLTE Trigger: TTCAGTAAGGTGGGCTTTTCAGGAACTCAGGCCCCC...CTGTACTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | ATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAATCATTTTCCCGAGGATaGTGGGGAAGACAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: MAKAQPRHDDVGSGDGTQSFSRG*WGRQPG Trigger: CCCAGGCTGTCTTCCCCACCATCCTCGGGAAAATGA...TTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGTGTGGATCCCTGGGTTaGCTCTCTCCAGGAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: RRPCSELVLIMPCSVWLRCGSLG*LSPGGW Trigger: CCAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACA...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGGGCCAGTACAGGCACTaGTGCCACCAGTCAGTACGA | + |
Preference number: 4 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMGQYRH*CHQSVR Trigger: TCGTACTGACTGGTGGCACCAGTGCCTGTACTGGCC...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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3UTR CAA 72 bp | AGAGGTTCTGCCAGAAGCGATAAGGGAGAGGACGGCTaGATTAGCTGTGTACAGGGCGGGGAAGTTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: RGSARSDKGEDG*ISCVQGGEVEG Trigger: ACCTTCAACTTCCCCGCCCTGTACACAGCTAATCAAGCCGTCCTCTCCCTTATCGCTTCTGGCAGAACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000134455.3 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGGCACCTCTGAGCACATaGAAGCCTCTTGCCCTAGGT | + |
Preference number: 4 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMAPLST*KPLALG Trigger: ACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGC...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | GCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATGCACCTCTGAGCACATaGAAGCCTCTTGCCCTAGGT | + |
Preference number: 4 (lower is better) Translates to: AKAQPRHDDVGSGDGTQNAPLST*KPLALG Trigger: ACCTAGGGCAAGAGGCTTTCATGTGCTCAGAGGTGC...ATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCACTCTCTCCAGGAGGCTaGTGTCGAAGAGCACCTCTG | + |
Preference number: 4 (lower is better) Translates to: PSGERRPCSELVLIMPCSLSPGG*CRRAPL Trigger: CAGAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAG...TGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | GCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATCTCTCTCCAGGAGGCTaGTGTCGAAGAGCACCTCTG | + |
Preference number: 4 (lower is better) Translates to: ACFDYALLSMAKAQPRHDLSPGG*CRRAPL Trigger: CAGAGGTGCTCTTCGACACCAGCCTCCTGGAGAGAG...ATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGGGCCAGTACAGGCACTaGTGCCACCAGTCAGTACGA | + |
Preference number: 4 (lower is better) Translates to: RRPCSELVLIMPCSVWLRGQYRH*CHQSVR Trigger: TCGTACTGACTGGTGGCACCAGTGCCTGTACTGGCC...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCAGGAGGGAAGACAAGATaGAGGCACCTATCCAGGCAC | + |
Preference number: 4 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPGGKTR*RHLSRH Trigger: GTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCC...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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3UTR CAA 72 bp | CCCATCTCCAGATTCAATAGCTGTTCCTTCTCTACATaGTCCCAGTTGGTGATGGCTCCTCGGGAGATGGGG | + |
Preference number: 4 (lower is better) Translates to: PISRFNSCSFST*SQLVMAPREMG Trigger: CCCCATCTCCCGAGGAGCCATCACCAACTGGGACAATGTAGAGAAGGAACAGCTATTGAATCTGGAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208625.2 |
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CDS-3UTR CCA 90 bp | TCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCTCATTTTCCCGAGGATaGTGGGGAAGACAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: SHRSLERPPLPSLSASGISFSRG*WGRQPG Trigger: CCCAGGCTGTCTTCCCCACCATCCTCGGGAAAATGA...GATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | GCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGGAGGGAAGACAAGATaGAGGCACCTATCCAGGCAC | + |
Preference number: 4 (lower is better) Translates to: ACFDYALLSMAKAQPRHDGGKTR*RHLSRH Trigger: GTGCCTGGATAGGTGCCTCCATCTTGTCTTCCCTCC...ATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | TACTGTCCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCGGGGGCCTGAGTTCCTaGAAAGCCCACCTTACTGAA | + |
Preference number: 4 (lower is better) Translates to: YCPSGERRPCSELVLIMPGGLSS*KAHLTE Trigger: TTCAGTAAGGTGGGCTTTTCAGGAACTCAGGCCCCC...GGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | GCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATGATCTAAGTGGCCTCTaGGATGTGCAGATCATGCCT | + |
Preference number: 4 (lower is better) Translates to: AKAQPRHDDVGSGDGTQNDLSGL*DVQIMP Trigger: AGGCATGATCTGCACATCTCAGAGGCCACTTAGATC...ATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATCATTTTCCCGAGGATaGTGGGGAAGACAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: SGERRPCSELVLIMPCSVSFSRG*WGRQPG Trigger: CCCAGGCTGTCTTCCCCACCATCCTCGGGAAAATGA...TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | CGTGCTCAGGAGTACATCTTGCAGCAGGCTGTGGATTCAGGGAGACTAAGCCTGGTTTCCAGATCTAAGTaGCCTCTGAGATGTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: RAQEYILQQAVDSGRLSLVSRSK*PLRCAD Trigger: ATCTGCACATCTCAGAGGCCACTTAGATCTGGAAAC...CAGGCTTAGTCTCCCTGAATCCACAGCCTGCTGCAAGATGTACTCCTGAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208761.2 |
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3UTR CAA 72 bp | TCAGTATGGCTAAGGCCCAGCCTAGGCATGATGATGTaGGCTCAGGTGATGGAACCCAAAATCCACCAGTCA | + |
Preference number: 4 (lower is better) Translates to: SVWLRPSLGMMM*AQVMEPKIHQS Trigger: TGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCATACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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3UTR CAA 72 bp | TCTGACCAAAGCAGCCTCAGGGAGGAAAGGGTTTTGTaGGTGAATACTTGCTGGTCACGGTTCACCATGAGG | + |
Preference number: 4 (lower is better) Translates to: SDQSSLREERVL*VNTCWSRFTMR Trigger: CCTCATGGTGAACCGTGACCAGCAAGTATTCACCAACAAAACCCTTTCCTCCCTGAGGCTGCTTTGGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208761.2 |
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3UTR CAA 72 bp | CACTCTGACCAAAGCAGCCTCAGGGAGGAAAGGGTTTaGTTGGTGAATACTTGCTGGTCACGGTTCACCATG | + |
Preference number: 4 (lower is better) Translates to: HSDQSSLREERV*LVNTCWSRFTM Trigger: CATGGTGAACCGTGACCAGCAAGTATTCACCAACAAAACCCTTTCCTCCCTGAGGCTGCTTTGGTCAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCAAGGATAGCCATTCATaGCAGGCACGAAGTAGGTCA | + |
Preference number: 4 (lower is better) Translates to: PCSELVLIMPCSVWLRPSKDSHS*QARSRS Trigger: TGACCTACTTCGTGCCTGTCATGAATGGCTATCCTT...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCAAAGGATAGCCATTCATaGCAGGCACGAAGTAGGTCA | + |
Preference number: 4 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPKDSHS*QARSRS Trigger: TGACCTACTTCGTGCCTGTCATGAATGGCTATCCTT...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | TCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCTGCCATCTGGCAGTGTaGATTTCTTCTGGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: SELVLIMPCSVWLRPSLGCHLAV*ISSGRM Trigger: CATCCTTCCAGAAGAAATTCACACTGCCAGATGGCA...GCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | TACTGTCCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCCCTTGGCCCTGTGCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: YCPSGERRPCSELVLIMPPWPCA*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGCACAGGGCCAAGG...GGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208761.2 |
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CDS-3UTR GCA 90 bp | AGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATGTGGCCTCTGAGATGTaGAGATCATGCCTTGGCCCT | + |
Preference number: 4 (lower is better) Translates to: SYLHTEVWRDHLCHLFLHVASEM*RSCLGP Trigger: AGGGCCAAGGCATGATCTGCACATCTCAGAGGCCAC...ATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | AGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCCTTCACACAGAAGTCTaGAGAGACCACCTTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: RPCSELVLIMPCSVWLRPLHTEV*RDHLCH Trigger: ATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAG...GGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTTCACACAGAAGTCTaGAGAGACCACCTTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: PCSELVLIMPCSVWLRPSLHTEV*RDHLCH Trigger: ATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAG...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | ATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAATCCAGGCACTATACTTaGCATATGGAGAGGCAGTTA | + |
Preference number: 4 (lower is better) Translates to: MAKAQPRHDDVGSGDGTQSRHYT*HMERQL Trigger: TAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGA...TTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | GCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCATCCAGGCACTATACTTaGCATATGGAGAGGCAGTTA | + |
Preference number: 4 (lower is better) Translates to: AQPRHDDVGSGDGTQNPPSRHYT*HMERQL Trigger: TAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGA...TGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGTGCCATCTGGCAGTGTaGATTTCTTCTGGAAGGATG | + |
Preference number: 4 (lower is better) Translates to: RRPCSELVLIMPCSVWLRCHLAV*ISSGRM Trigger: CATCCTTCCAGAAGAAATTCACACTGCCAGATGGCA...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | GTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCGATCTAAGTGGCCTCTaGGATGTGCAGATCATGCCT | + |
Preference number: 4 (lower is better) Translates to: VTFTQKSGETTFAISFCIDLSGL*DVQIMP Trigger: AGGCATGATCTGCACATCTCAGAGGCCACTTAGATC...GATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | CTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAGTCAGAAGATCTAAGTGGCCTCTaGGATGTGCAGATCATGCCT | + |
Preference number: 4 (lower is better) Translates to: LGMMMLAQVMEPKIHQSEDLSGL*DVQIMP Trigger: AGGCATGATCTGCACATCTCAGAGGCCACTTAGATC...TTCTGACTGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | GCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGCTGTTCCTGCACCATaGTGGGTAGAAATGCTGTTT | + |
Preference number: 4 (lower is better) Translates to: ACFDYALLSMAKAQPRHDAVPAP*WVEMLF Trigger: AAACAGCATTTCTACCCATCATGGTGCAGGAACAGC...ATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207630.2 |
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CDS-3UTR GCA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACACATGAAAGCCTCTTaGCCTAGGTTGATTTCCTTG | + |
Preference number: 4 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPHMKAS*PRLISL Trigger: CAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTG...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR GCA 90 bp | AGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCCACATGAAAGCCTCTTaGCCTAGGTTGATTTCCTTG | + |
Preference number: 4 (lower is better) Translates to: RPCSELVLIMPCSVWLRPHMKAS*PRLISL Trigger: CAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTG...GGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTGACATCTCATTTTCCCGAGGATaGTGGGGAAGACAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: PSGSVNFFWKDGAEVFDISFSRG*WGRQPG Trigger: CCCAGGCTGTCTTCCCCACCATCCTCGGGAAAATGA...GATGTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | GCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATACTCGAGGTCAGCTATaGTCTCTAACACATTCCCAT | + |
Preference number: 4 (lower is better) Translates to: AKAQPRHDDVGSGDGTQNTRGQL*SLTHSH Trigger: ATGGGAATGTGTTAGAGACCATAGCTGACCTCGAGT...ATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCGTTTCCAGATCTAAGTaGCCTCTGAGATGTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: PCSELVLIMPCSVWLRPSVSRSK*PLRCAD Trigger: ATCTGCACATCTCAGAGGCCACTTAGATCTGGAAAC...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208761.2 |
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3UTR CAA 72 bp | GAAGACAAGATGGAGGCACCTATCCAGGCACTATACTaGGCATATGGAGAGGCAGTTACCTTCACACAGAAG | + |
Preference number: 4 (lower is better) Translates to: EDKMEAPIQALY*AYGEAVTFTQK Trigger: CTTCTGTGTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGCTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMLTTVS*GIESGL Trigger: AAGACCTGACTCTATACCTCATGAAACTGTTGTCAG...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTGACAACAGTTTCATaGGGTATAGAGTCAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: PCSELVLIMPCSVWLRPSLTTVS*GIESGL Trigger: AAGACCTGACTCTATACCTCATGAAACTGTTGTCAG...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
||
CDS-3UTR TCA 90 bp | CCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTGACATCCCTTGGCCCTGTGCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: PSGSVNFFWKDGAEVFDIPWPCA*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGCACAGGGCCAAGG...GATGTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | CACAGTAACCACCTTGTGCTCCCTGCTGTCAGATCCCACAGTGCATCACTTCACTTCAATAGCTGTTCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: HSNHLVLPAVRSHSASLHFNSCS*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGAACAGCTATTGAA...GTGAAGTGATGCACTGTGGGATCTGACAGCAGGGAGCACAAGGTGGTTACTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 |
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CDS-3UTR GCA 90 bp | GCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCATGTTGTAGTCCAGTaGCACATAGCTGTATTTGTC | + |
Preference number: 4 (lower is better) Translates to: AKAQPRHDDVGSGDGTQNHVVVQ*HIAVFV Trigger: GACAAATACAGCTATGTGGCACTGGACTACAACATG...ATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR GCA 90 bp | TCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCCATGTTGTAGTCCAGTaGCACATAGCTGTATTTGTC | + |
Preference number: 4 (lower is better) Translates to: SELVLIMPCSVWLRPSLGHVVVQ*HIAVFV Trigger: GACAAATACAGCTATGTGGCACTGGACTACAACATG...GCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | TCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCACTATACTTGGCATATaGAGAGGCAGTTACCTTCAC | + |
Preference number: 4 (lower is better) Translates to: SELVLIMPCSVWLRPSLGTILGI*RGSYLH Trigger: GTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGT...GCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | TGGTGGGATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTCTCAATCTAGTTTTCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: WWDFSQDMMLSRVSMWIPLNLVF*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGAAAACTAGATTGAG...AGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATCCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208038.2 |
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CDS-3UTR TCA 90 bp | TCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCATAGGATCTGCACCATaGTGGGTAGAAATGCTGTTT | + |
Preference number: 4 (lower is better) Translates to: SHRSLERPPLPSLSASGIIGSAP*WVEMLF Trigger: AAACAGCATTTCTACCCATCATGGTGCAGATCCTAT...GATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207482.2 |
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CDS-3UTR CCA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTACTATGTCCAGCTTGGTaGTTGACAAGTGCAAAGGAT | + |
Preference number: 4 (lower is better) Translates to: SGERRPCSELVLIMPCSVLCPAW*LTSAKD Trigger: ATCCTTTGCACTTGTCAACCACCAAGCTGGACATAG...TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCAAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 4 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGGATTTCCTTGCCATCTaGCAGTGTGAATTTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: LVLIMPCSVWLRPSLGMMDFLAI*QCEFLL Trigger: CAGAAGAAATTCACACTGCCAGATGGCAAGGAAATC...CATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | GCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCAATTTCCAAATACTCATaGTTTGTGATCCACATGTCC | + |
Preference number: 4 (lower is better) Translates to: AQPRHDDVGSGDGTQNPPISKYS*FVIHMS Trigger: GGACATGTGGATCACAAACCATGAGTATTTGGAAAT...TGGTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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3UTR CAA 72 bp | ATAATCATATCATCTTATAGACAAGCCATCTTTGTCTaGAGGGTCCCAGAGGCCATGCCCTGTCCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: IIISSYRQAIFV*RVPEAMPCPGG Trigger: ACCACCAGGACAGGGCATGGCCTCTGGGACCCTCAAGACAAAGATGGCTTGTCTATAAGATGATATGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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3UTR CAA 72 bp | GAGCACATGAAAGCCTCTTGCCCTAGGTTGATTTCCTaGCCATCTGGCAGTGTGAATTTCTTCTGGAAGGAT | + |
Preference number: 4 (lower is better) Translates to: EHMKASCPRLIS*PSGSVNFFWKD Trigger: ATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAAGGAAATCAACCTAGGGCAAGAGGCTTTCATGTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208625.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | CTAAATATGACAGAAGGGCCAATTTCCAAATACTCATGGTTTGTGATCCACATGGGGGGCCTGAGTTCCTaGAAAGCCCACCTTACTGAA | + |
Preference number: 4 (lower is better) Translates to: LNMTEGPISKYSWFVIHMGGLSS*KAHLTE Trigger: TTCAGTAAGGTGGGCTTTTCAGGAACTCAGGCCCCC...CATGTGGATCACAAACCATGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207482.2 ENSMUST00000207642.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGGTTTCGAATAGGATCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: RRPCSELVLIMPCSVWLRVSNRI*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGATCCTATTCGAAAC...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152910.3 |
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CDS-3UTR TCA 90 bp | TTGAATAGAGTCCTCTGGTGGGATTTCTCACAGGACATGATGCTCTCCAGGGTGTTCAATAGCTGTTCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: LNRVLWWDFSQDMMLSRVFNSCS*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGAACAGCTATTGAA...CACCCTGGAGAGCATCATGTCCTGTGAGAAATCCCACCAGAGGACTCTATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207235.2 ENSMUST00000208457.2 |
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CDS-3UTR GCA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGTTCAATAGCTGTTCCTaGACCATGATGGGTAGAAAT | + |
Preference number: 4 (lower is better) Translates to: RRPCSELVLIMPCSVWLRFNSCS*TMMGRN Trigger: ATTTCTACCCATCATGGTGCAGGAACAGCTATTGAA...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | CTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGAGTGTGAATTTCTTCTaGAAGGATGGTGCTGAAGTT | + |
Preference number: 4 (lower is better) Translates to: LVLIMPCSVWLRPSLGMMSVNFF*KDGAEV Trigger: AACTTCAGCACCATCCTTCCAGAAGAAATTCACACT...CATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTAGATTTCCTTGCCATCTaGCAGTGTGAATTTCTTCTG | + |
Preference number: 4 (lower is better) Translates to: SGERRPCSELVLIMPCSVDFLAI*QCEFLL Trigger: CAGAAGAAATTCACACTGCCAGATGGCAAGGAAATC...TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTAACTATACTTGGCATATaGAGAGGCAGTTACCTTCAC | + |
Preference number: 4 (lower is better) Translates to: SGERRPCSELVLIMPCSVTILGI*RGSYLH Trigger: GTGAAGGTAACTGCCTCTCCATATGCCAAGTATAGT...TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CCA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCAATTTCCAAATACTCATaGTTTGTGATCCACATGTCC | + |
Preference number: 4 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPISKYS*FVIHMS Trigger: GGACATGTGGATCACAAACCATGAGTATTTGGAAAT...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR TCA 90 bp | ACCAGTCAGAAGCATCTTCTAAATATGACAGAAGGGCCAATTTCCAAATACTCACCTTGGCCCTGTGCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: TSQKHLLNMTEGPISKYSPWPCA*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGCACAGGGCCAAGG...TGAGTATTTGGAAATTGGCCCTTCTGTCATATTTAGAAGATGCTTCTGACTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR CCA 90 bp | TTTTTGACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGTTTCCAGATCTAAGTaGCCTCTGAGATGTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: FLTSPCCSPVPHSCICLSVSRSK*PLRCAD Trigger: ATCTGCACATCTCAGAGGCCACTTAGATCTGGAAAC...TGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGTCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207482.2 ENSMUST00000208761.2 |
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CDS-3UTR TCA 90 bp | TTTTTGACATCTCCATGTTGTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCATTCAATAGCTGTTCCTaGGTCATTCTGGATTTAGCT | + |
Preference number: 4 (lower is better) Translates to: FLTSPCCSPVPHSCICLSFNSCS*VILDLA Trigger: AGCTAAATCCAGAATGACTCAGGAACAGCTATTGAA...TGAAAGACAAATACAGCTATGTGGCACTGGACTACAACATGGAGATGTCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000207235.2 ENSMUST00000208153.2 ENSMUST00000208457.2 |
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CDS-3UTR CAA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGTGGATCCCTGGGTaGGCTCTCTCCAGGAGGCTG | + |
Preference number: 5 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMMWIPG*ALSRRL Trigger: CAGCCTCCTGGAGAGAGCCAACCCAGGGATCCACAT...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | ATGGCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAACTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: MAKAQPRHDDVGSGDGTQLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...TTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | GGGACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: GTFTQKSGETTFAISFCILFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...GATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207235.2 |
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CDS-3UTR CAA 90 bp | GGGAAGACAAGATGGAGGCACCTATCCAGGCACTATACTTGGCATATGGAGAGGCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: GKTRWRHLSRHYTWHMERLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...CCTCTCCATATGCCAAGTATAGTGCCTGGATAGGTGCCTCCATCTTGTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | GAGGCAGTTACCTTCACACAGAAGTCTGGAGAGACCACCTTTGCCATCTCTTTCCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: EAVTFTQKSGETTFAISFLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...GAAAGAGATGGCAAAGGTGGTCTCTCCAGACTTCTGTGTGAAGGTAACTGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCTACAGGGCGGGGAAGTaGAAGGTTTCGAATAGGATC | + |
Preference number: 5 (lower is better) Translates to: PCSELVLIMPCSVWLRPSYRAGK*KVSNRI Trigger: GATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207482.2 |
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CDS-3UTR CAA 90 bp | AGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCACCCTAGGTTGATTTCCTaGCCATCTGGCAGTGTGAAT | + |
Preference number: 5 (lower is better) Translates to: RPSLGMMMLAQVMEPKIHPRLIS*PSGSVN Trigger: ATTCACACTGCCAGATGGCAAGGAAATCAACCTAGG...GTGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATCTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCC | + |
Preference number: 5 (lower is better) Translates to: ACFDYALLSMAKAQPRHDLERPP*PSLSAS Trigger: GGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAG...ATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | GCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGATGTGATCCACATGTCCTaGAACAGAGGGAGGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: ACFDYALLSMAKAQPRHDVIHMS*NRGRED Trigger: GTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCAC...ATCATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGGTGATCCACATGTCCTaGAACAGAGGGAGGGAAGAC | + |
Preference number: 5 (lower is better) Translates to: RRPCSELVLIMPCSVWLRVIHMS*NRGRED Trigger: GTCTTCCCTCCCTCTGTTCAAGGACATGTGGATCAC...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | TGGTGGGATTTCTCACAGGACATGATGCTCTCCAGGGTGAGCATGTGGATCCCTAACCCCTCTAGCACATaGGTATGTTTCATTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: WWDFSQDMMLSRVSMWIPNPSST*VCFIFP Trigger: CGGGAAAATGAAACATACCAATGTGCTAGAGGGGTT...AGGGATCCACATGCTCACCCTGGAGAGCATCATGTCCTGTGAGAAATCCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | TACTGTCCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: YCPSGERRPCSELVLIMPLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...GGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | TACTGTCCTTCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCCTGGAGAGACCACCTTaGCCATCTCTTTCTGCATCC | + |
Preference number: 5 (lower is better) Translates to: YCPSGERRPCSELVLIMPLERPP*PSLSAS Trigger: GGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAG...GGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGAAGGACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | CCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCATCCAGGCACTATACTaGGCATATGGAGAGGCAGTT | + |
Preference number: 5 (lower is better) Translates to: PCSELVLIMPCSVWLRPSIQALY*AYGEAV Trigger: AACTGCCTCTCCATATGCCAAGTATAGTGCCTGGAT...GCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS TCA 90 bp | AGTCCCAAACAGCAGGTTCCTTCTTCTCTACATTGTCCCAGTTGGTaGTGGCTCCTCGGGAGATGGGGTAGTACATATTCAGTTCTGTTC | + |
Preference number: 5 (lower is better) Translates to: SPKQQVPSSLHCPSW*WLLGRWGSTYSVLF Trigger: GAACAGAACTGAATATGTACTACCCCATCTCCCGAGGAGCCATCACCAACTGGGACAATGTAGAGAAGAAGGAACCTGCTGTTTGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134455.3 |
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CDS-3UTR CAA 90 bp | AAGTCTGGAGAGACCACCTTTGCCATCTCTTTCTGCATCCGGAATCGTAGGCCAAACCCCTCTAGCACATaGGTATGTTTCATTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: KSGETTFAISFCIRNRRPNPSST*VCFIFP Trigger: CGGGAAAATGAAACATACCAATGTGCTAGAGGGGTT...TGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCCAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | AAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATCCAAACCCCTCTAGCACATaGGTATGTTTCATTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: KAQPRHDDVGSGDGTQNPNPSST*VCFIFP Trigger: CGGGAAAATGAAACATACCAATGTGCTAGAGGGGTT...TGGATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGAACCCCTCTAGCACATaGGTATGTTTCATTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMNPSST*VCFIFP Trigger: CGGGAAAATGAAACATACCAATGTGCTAGAGGGGTT...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000152910.3 ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208038.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | CCATTGTCTGACAACAGTTTCATGAGGTATAGAGTCAGGTCTTGGCCAGCTATGCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: PLSDNSFMRYRVRSWPAMLFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...CATAGCTGGCCAAGACCTGACTCTATACCTCATGAAACTGTTGTCAGACAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | GTAGTCCAGTGCCACATAGCTGTATTTGTCTTTCAGGTCTCGGATGTACTCGAGTACAGGGCGGGGAAGTaGAAGGTTTCGAATAGGATC | + |
Preference number: 5 (lower is better) Translates to: VVQCHIAVFVFQVSDVLEYRAGK*KVSNRI Trigger: GATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA...CTCGAGTACATCCGAGACCTGAAAGACAAATACAGCTATGTGGCACTGGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207482.2 |
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CDS-3UTR CAA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCTAGGTTGATTTCCTaGCCATCTGGCAGTGTGAAT | + |
Preference number: 5 (lower is better) Translates to: RRPCSELVLIMPCSVWLRPRLIS*PSGSVN Trigger: ATTCACACTGCCAGATGGCAAGGAAATCAACCTAGG...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS GCA 90 bp | TTAGCTGTGTACAGGGCGGGGAAGTTGAAGGTTTCGAATAGGATCTaGACCATGATGGGTAGAAATGCTGTTTCCAGATCTAAGTGGCCT | + |
Preference number: 5 (lower is better) Translates to: LAVYRAGKLKVSNRI*TMMGRNAVSRSKWP Trigger: AGGCCACTTAGATCTGGAAACAGCATTTCTACCCATCATGGTGCAGATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTACACAGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207482.2 |
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CDS-3UTR CAA 90 bp | CCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTGACATCCTGTTCAGGGGCAATTaGGAGGGAGTGGTAGAAGGA | + |
Preference number: 5 (lower is better) Translates to: PSGSVNFFWKDGAEVFDILFRGN*EGVVEG Trigger: TCCTTCTACCACTCCCTCCAAATTGCCCCTGAACAG...GATGTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS-3UTR CAA 90 bp | TCAGGAGAAAGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTAATCCAGGCACTATACTaGGCATATGGAGAGGCAGTT | + |
Preference number: 5 (lower is better) Translates to: SGERRPCSELVLIMPCSVIQALY*AYGEAV Trigger: AACTGCCTCTCCATATGCCAAGTATAGTGCCTGGAT...TACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCTTTCTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | GAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGCCCAGCCTAGGCATGTCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 5 (lower is better) Translates to: ELVLIMPCSVWLRPSLGMSNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...CATGCCTAGGCTGGGCCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | GCTAAGGCCCAGCCTAGGCATGATGATGTTGGCTCAGGTGATGGAACCCAAAATATGGTGCTGAAGTTTTaGACATCTCCATGTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: AKAQPRHDDVGSGDGTQNMVLKF*TSPCCS Trigger: ACTACAACATGGAGATGTCAAAAACTTCAGCACCAT...ATTTTGGGTTCCATCACCTGAGCCAACATCATCATGCCTAGGCTGGGCCTTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS TCA 90 bp | CCAGGGAGGAACAATGCTTGCTGGCTCATACTCAATCTAGTTTTCTaGGTCATTCTGGATTTAGCTTCCTTGCTCGTTAATGGTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: PGRNNACWLILNLVF*VILDLASLLVNGAS Trigger: AGAGGCACCATTAACGAGCAAGGAAGCTAAATCCAGAATGACTCAGAAAACTAGATTGAGTATGAGCCAGCAAGCATTGTTCCTCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208038.2 |
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CDS-3UTR CAA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGTCTAACACATTCCCATaGTCTGACAACAGTTTCATG | + |
Preference number: 5 (lower is better) Translates to: RRPCSELVLIMPCSVWLRSNTFP*SDNSFM Trigger: CATGAAACTGTTGTCAGACAATGGGAATGTGTTAGA...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | AGGAGGCCTTGCTCTGAGCTTGTTTTGATTATGCCCTGCTCAGTATGGCTAAGGATGGTGCTGAAGTTTTaGACATCTCCATGTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: RRPCSELVLIMPCSVWLRMVLKF*TSPCCS Trigger: ACTACAACATGGAGATGTCAAAAACTTCAGCACCAT...CCTTAGCCATACTGAGCAGGGCATAATCAAAACAAGCTCAGAGCAAGGCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000152910.3 ENSMUST00000207630.2 |
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CDS-3UTR CAA 90 bp | TTGCCATCTGGCAGTGTGAATTTCTTCTGGAAGGATGGTGCTGAAGTTTTTGACAACCCCTCTAGCACATaGGTATGTTTCATTTTCCCG | + |
Preference number: 5 (lower is better) Translates to: LPSGSVNFFWKDGAEVFDNPSST*VCFIFP Trigger: CGGGAAAATGAAACATACCAATGTGCTAGAGGGGTT...GTCAAAAACTTCAGCACCATCCTTCCAGAAGAAATTCACACTGCCAGATGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 7 transcripts: ENSMUST00000134455.3 ENSMUST00000207235.2 ENSMUST00000207482.2 ENSMUST00000208038.2 ENSMUST00000208153.2 ENSMUST00000208457.2 ENSMUST00000208761.2 |
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CDS GCA 72 bp | TGGCCTCTGAGATGTGCAGATCATGCCTTGGCCCTGTaGCTGAGTCATTCTGGATTTAGCTTCCTTGCTCGT | + |
Preference number: 6 (lower is better) Translates to: WPLRCADHALAL*LSHSGFSFLAR Trigger: ACGAGCAAGGAAGCTAAATCCAGAATGACTCAGGCACAGGGCCAAGGCATGATCTGCACATCTCAGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208761.2 |
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CDS GCA 72 bp | GAGCCACGCATCAGGGCAGGAACCAGGGAGGAACAATaGTTGCTGGCTCATACTCAATCTAGTTTTCTGAGT | + |
Preference number: 6 (lower is better) Translates to: EPRIRAGTREEQ*LLAHTQSSFLS Trigger: ACTCAGAAAACTAGATTGAGTATGAGCCAGCAAGCATTGTTCCTCCCTGGTTCCTGCCCTGATGCGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208038.2 |
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CDS CAA 72 bp | AGATCTAAGTGGCCTCTGAGATGTGCAGATCATGCCTaGGCCCTGTGCCTGAGTCATTCTGGATTTAGCTTC | + |
Preference number: 6 (lower is better) Translates to: RSKWPLRCADHA*ALCLSHSGFSF Trigger: GAAGCTAAATCCAGAATGACTCAGGCACAGGGCCAAGGCATGATCTGCACATCTCAGAGGCCACTTAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000207482.2 ENSMUST00000207630.2 ENSMUST00000208761.2 |
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CDS GCA 72 bp | TACAGGGCGGGGAAGTTGAAGGTTTCGAATAGGATCTaGACCATGATGGGTAGAAATGCTGTTTCCAGATCT | + |
Preference number: 6 (lower is better) Translates to: YRAGKLKVSNRI*TMMGRNAVSRS Trigger: AGATCTGGAAACAGCATTTCTACCCATCATGGTGCAGATCCTATTCGAAACCTTCAACTTCCCCGCCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207482.2 |
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CDS TCA 72 bp | ATCCCATCTCCAGATTCAATAGCTGTTCCTGCACCATaGTGGGTAGAAATGCTGTTTCCAGATCTAAGTGGC | + |
Preference number: 6 (lower is better) Translates to: IPSPDSIAVPAP*WVEMLFPDLSG Trigger: GCCACTTAGATCTGGAAACAGCATTTCTACCCATCATGGTGCAGGAACAGCTATTGAATCTGGAGATGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207630.2 |
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CDS GCA 72 bp | GTAGGTCATCCCATCTCCAGATTCAATAGCTGTTCCTaGACCATGATGGGTAGAAATGCTGTTTCCAGATCT | + |
Preference number: 6 (lower is better) Translates to: VGHPISRFNSCS*TMMGRNAVSRS Trigger: AGATCTGGAAACAGCATTTCTACCCATCATGGTGCAGGAACAGCTATTGAATCTGGAGATGGGATGACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207630.2 |
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CDS TCA 72 bp | AACAATGCTTGCTGGCTCATACTCAATCTAGTTTTCTaGGTCATTCTGGATTTAGCTTCCTTGCTCGTTAAT | + |
Preference number: 6 (lower is better) Translates to: NNACWLILNLVF*VILDLASLLVN Trigger: ATTAACGAGCAAGGAAGCTAAATCCAGAATGACTCAGAAAACTAGATTGAGTATGAGCCAGCAAGCATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208038.2 |