Pregenerated sensors for ACTBL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055194Ensembl transcript IDs: ENSMUST00000054716.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATAAAAATCACAGTGTGGTTAGCTGTGTCCTAGCCCTGGATACTTaGATGGTGACGCAGATTTCCTGGCTTGTACACTCAATAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: DKNHSVVSCVLALDT*MVTQISWLVHSIRS Trigger: ACTTCTTATTGAGTGTACAAGCCAGGAAATCTGCGTCACCATCCAAGTATCCAGGGCTAGGACACAGCTAACCACACTGTGATTTTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR TCA 90 bp | CCAGAATCACGGCCAACAGATATTACTCAAGACACATTATTAGGCTaGGAGATATCGATAAAATTATTCTTGTCACTCTGTGGCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: PESRPTDITQDTLLG*EISIKLFLSLCGRT Trigger: TGTTCTGCCACAGAGTGACAAGAATAATTTTATCGATATCTCTCAGCCTAATAATGTGTCTTGAGTAATATCTGTTGGCCGTGATTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR TCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGGGGGTACCATCATTATaGCCCAGGAAAAGGGACACG | + |
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Preference number: 2 (lower is better) Translates to: HLRLLNFYSSSLLARMLLGVPSL*PRKRDT Trigger: CGTGTCCCTTTTCCTGGGTCATAATGATGGTACCCC...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGGTGTCCTGGGTGAGGTaGGGTACCATCATTATGACC | + |
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Preference number: 2 (lower is better) Translates to: HLRLLNFYSSSLLARMLLVSWVR*GTIIMT Trigger: GGTCATAATGATGGTACCCCACCTCACCCAGGACAC...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGTTACCTTCAGTGTCCTaGGTGAGGTGGGGTACCATC | + |
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Preference number: 2 (lower is better) Translates to: HLRLLNFYSSSLLARMLLLPSVS*VRWGTI Trigger: GATGGTACCCCACCTCACCCAGGACACTGAAGGTAA...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CCA 90 bp | TATGAAAGAGAAGGGATTCCTTCCTCCCACGTGTCTAACAGTATCTTCATGAGCCTAGCCCTGGATACTTaGATGGTGACGCAGATTTCC | + |
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Preference number: 2 (lower is better) Translates to: YEREGIPSSHVSNSIFMSLALDT*MVTQIS Trigger: GGAAATCTGCGTCACCATCCAAGTATCCAGGGCTAG...GCTCATGAAGATACTGTTAGACACGTGGGAGGAAGGAATCCCTTCTCTTTCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCTTTGTAGAGTGTTTTTaGCCATTTCAGCAAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: KDAAAALPIATSLHMRNTFVECF*PFQQEL Trigger: GAGCTCTTGCTGAAATGGTCAAAAACACTCTACAAA...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCAACAAGCACATAAGTTaGTCAGTCAGCCAAGTACAT | + |
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Preference number: 2 (lower is better) Translates to: KDAAAALPIATSLHMRNTNKHIS*SVSQVH Trigger: ATGTACTTGGCTGACTGAGCAACTTATGTGCTTGTT...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATCAATAAGAAGTCAATaGTTTACCTTCAGTGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LQGCCCCASHSNILAYEESIRSQ*FTFSVL Trigger: CAGGACACTGAAGGTAAATCATTGACTTCTTATTGA...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR TCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCGAGCTGATAAGACGTTaGCTAGAGAATAAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: KDAAAALPIATSLHMRNTELIRR*LENKNK Trigger: CTTGTTTTTATTCTCTAGTCAACGTCTTATCAGCTC...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR GCA 72 bp | TCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGCTaGGCTTCCCATAGCAACATCCTTGCATATGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: STLVPCLQGCCC*ASHSNILAYEE Trigger: TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR GCA 72 bp | ACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTaGTGCGCTTCCCATAGCAACATCCTTGCATATGAG | + |
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Preference number: 3 (lower is better) Translates to: TSTLVPCLQGCC*CASHSNILAYE Trigger: CTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR CCA 72 bp | GAAGTCAATGATTTACCTTCAGTGTCCTGGGTGAGGTaGGGTACCATCATTATGACCCAGGAAAAGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: EVNDLPSVSWVR*GTIIMTQEKGH Trigger: GTGTCCCTTTTCCTGGGTCATAATGATGGTACCCCACCTCACCCAGGACACTGAAGGTAAATCATTGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCCAAGCCCACATTTCTTaGAGCCCTACAGGCATAAAA | + |
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Preference number: 3 (lower is better) Translates to: KDAAAALPIATSLHMRNTQAHIS*SPTGIK Trigger: TTTTATGCCTGTAGGGCTCAAAGAAATGTGGGCTTG...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAAAAACAAGCACATAAGTaGCTCAGTCAGCCAAGTACA | + |
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Preference number: 3 (lower is better) Translates to: LQGCCCCASHSNILAYEEKQAHK*LSQPST Trigger: TGTACTTGGCTGACTGAGCAACTTATGTGCTTGTTT...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR-3UTR CAA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGTCGATAAAATTATTCTaGTCACTCTGTGGCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: HLRLLNFYSSSLLARMLLSIKLF*SLCGRT Trigger: TGTTCTGCCACAGAGTGACAAGAATAATTTTATCGA...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR TCA 72 bp | CAGATTTCCTGGCTTGTACACTCAATAAGAAGTCAATaGTTTACCTTCAGTGTCCTGGGTGAGGTGGGGTAC | + |
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Preference number: 3 (lower is better) Translates to: QISWLVHSIRSQ*FTFSVLGEVGY Trigger: GTACCCCACCTCACCCAGGACACTGAAGGTAAATCATTGACTTCTTATTGAGTGTACAAGCCAGGAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR CCA 72 bp | AAAAGCAAGCTTTGTAAAAGAAAGCACATCTGCAGATaGAACAACTGCAGCAGCATGCCTGCTCAGTTGATA | + |
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Preference number: 3 (lower is better) Translates to: KSKLCKRKHICR*NNCSSMPAQLI Trigger: TATCAACTGAGCAGGCATGCTGCTGCAGTTGTTCCATCTGCAGATGTGCTTTCTTTTACAAAGCTTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR GCA 72 bp | CTTTGTAAAAGAAAGCACATCTGCAGATGGAACAACTaGAGCAGCATGCCTGCTCAGTTGATAAAGGAAATA | + |
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Preference number: 3 (lower is better) Translates to: LCKRKHICRWNN*SSMPAQLIKEI Trigger: TATTTCCTTTATCAACTGAGCAGGCATGCTGCTGCAGTTGTTCCATCTGCAGATGTGCTTTCTTTTACAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR TCA 72 bp | GCTAAACTTTTGTATTGCAGATTTGTAGAGTGTTTTTaGCCATTTCAGCAAGAGCTCTATATAAGGCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: AKLLYCRFVECF*PFQQELYIRLA Trigger: TGCAAGCCTTATATAGAGCTCTTGCTGAAATGGTCAAAAACACTCTACAAATCTGCAATACAAAAGTTTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR TCA 72 bp | AGAGCTCTATATAAGGCTTGCAAATTGTATTCAGCCTaGAATTATATTCTCATGATCTTACTCCTTGTCACA | + |
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Preference number: 3 (lower is better) Translates to: RALYKACKLYSA*NYILMILLLVT Trigger: TGTGACAAGGAGTAAGATCATGAGAATATAATTTCAGGCTGAATACAATTTGCAAGCCTTATATAGAGCTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGGACCCCCTGGTGTCGTaGACGACCAACCATGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: HLRLLNFYSSSLLARMLLDPLVS*TTNHGG Trigger: CCCTCCATGGTTGGTCGTCCACGACACCAGGGGGTC...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGGTGGACGACCAACCATaGAGGGGAACACAGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: HLRLLNFYSSSLLARMLLVDDQP*RGTQHG Trigger: CCCGTGCTGTGTTCCCCTCCATGGTTGGTCGTCCAC...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCACAGGCTGGCGAGGATaGAGCCCCCAATCCAAACCG | + |
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Preference number: 4 (lower is better) Translates to: KDAAAALPIATSLHMRNTTGWRG*SPQSKP Trigger: CGGTTTGGATTGGGGGCTCCATCCTCGCCAGCCTGT...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR TCA 90 bp | CCTTCAGTGTCCTGGGTGAGGTGGGGTACCATCATTATGACCCAGGAAAAGGGATGCCTTGCACATCCCTaGCCCATTATCTACTACCAA | + |
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Preference number: 4 (lower is better) Translates to: PSVSWVRWGTIIMTQEKGCLAHP*PIIYYQ Trigger: TTGGTAGTAGATAATGGGTCAGGGATGTGCAAGGCA...TCCCTTTTCCTGGGTCATAATGATGGTACCCCACCTCACCCAGGACACTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR TCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGTCTCTGCTGTGGTGGTaGAGTTATAGCCTCGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HLRLLNFYSSSLLARMLLSLLWW*SYSLVL Trigger: CAGAACGAGGCTATAACTTCACCACCACAGCAGAGA...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR GCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGAGGATGTTCATCCGGTaGTACCCGGAGCTCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLRLLNFYSSSLLARMLLRMFIR*YPELIV Trigger: TACAATGAGCTCCGGGTAGCACCGGATGAACATCCT...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | CCTTCAGTGTCCTGGGTGAGGTGGGGTACCATCATTATGACCCAGGAAAAGGGAGATCTAGTCGTAGAATaGCATGAGGCAGAGCGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PSVSWVRWGTIIMTQEKGDLVVE*HEAERN Trigger: GTTACGCTCTGCCTCATGCCATTCTACGACTAGATC...TCCCTTTTCCTGGGTCATAATGATGGTACCCCACCTCACCCAGGACACTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR GCA 90 bp | CCTTCAGTGTCCTGGGTGAGGTGGGGTACCATCATTATGACCCAGGAAAAGGGAAGGTTGTCTCATGGATaGCTCTGGATTCAATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: PSVSWVRWGTIIMTQEKGRLSHG*LWIQCL Trigger: TAGGCATTGAATCCAGAGGCATCCATGAGACAACCT...TCCCTTTTCCTGGGTCATAATGATGGTACCCCACCTCACCCAGGACACTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCCTGGAAAATGGCTTCTaGGCACCGGAAGCGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: KDAAAALPIATSLHMRNTLENGF*APEAFI Trigger: AATGAACGCTTCCGGTGCCCAGAAGCCATTTTCCAG...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | AAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAATACCCCTAGAAAGGAAGGCTaGAAAATGGCTTCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KDAAAALPIATSLHMRNTPRKEG*KMASGH Trigger: GTGCCCAGAAGCCATTTTCCAGCCTTCCTTTCTAGG...GGTATTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR TCA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAAACATGGCAGGTGTGTTaGAAGCCTCGAACATTATCT | + |
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Preference number: 4 (lower is better) Translates to: LQGCCCCASHSNILAYEETWQVC*KPRTLS Trigger: AGATAATGTTCGAGGCTTTCAACACACCTGCCATGT...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAACGACTCCGTGTTCAATaGGATACTTCAAGGTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LQGCCCCASHSNILAYEERLRVQ*DTSRSR Trigger: TCTTGACCTTGAAGTATCCCATTGAACACGGAGTCG...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR GCA 90 bp | CCTTGTCACATATTTTCATGTAAGCAAGCCCACATTTCTTTGAGCCCTACAGGCCCCCAAAACCTGCCTTaGACATCCCTGACCCATTAT | + |
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Preference number: 4 (lower is better) Translates to: PCHIFSCKQAHISLSPTGPQNLP*TSLTHY Trigger: ATAATGGGTCAGGGATGTGCAAGGCAGGTTTTGGGG...GCCTGTAGGGCTCAAAGAAATGTGGGCTTGCTTACATGAAAATATGTGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR GCA 90 bp | CCTTCAGTGTCCTGGGTGAGGTGGGGTACCATCATTATGACCCAGGAAAAGGGATTTCATGGTACTTGGTaGCAAGGTTACAATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSVSWVRWGTIIMTQEKGFHGTW*QGYNFL Trigger: AAGGAAATTGTAACCTTGGCACCAAGTACCATGAAA...TCCCTTTTCCTGGGTCATAATGATGGTACCCCACCTCACCCAGGACACTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGCAGACAGCACAGTGTTaGCAAATAAATCCTTACGAA | + |
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Preference number: 4 (lower is better) Translates to: HLRLLNFYSSSLLARMLLQTAQC*QINPYE Trigger: TTCGTAAGGATTTATTTGCCAACACTGTGCTGTCTG...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CCA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAAAATTTTCATGGTACTTaGTGCCAAGGTTACAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LQGCCCCASHSNILAYEENFHGT*CQGYNF Trigger: GAAATTGTAACCTTGGCACCAAGTACCATGAAAATT...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| 3UTR CAA 72 bp | AAGCTAACATTTCAGAGACACGTTTGTACACACGTGTaGCCAGTCGTTGGATGTCATAAAATGAAGAACGAC | + |
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Preference number: 4 (lower is better) Translates to: KLTFQRHVCTHV*PVVGCHKMKND Trigger: GTCGTTCTTCATTTTATGACATCCAACGACTGGCAACACGTGTGTACAAACGTGTCTCTGAAATGTTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CAA 90 bp | CACCTGAGGCTACTGAACTTCTACTCTAGTTCCCTGCTTGCAAGGATGCTGCTGCCCCCAAAACCTGCCTaGCACATCCCTGACCCATTA | + |
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Preference number: 5 (lower is better) Translates to: HLRLLNFYSSSLLARMLLPPKPA*HIPDPL Trigger: TAATGGGTCAGGGATGTGCAAGGCAGGTTTTGGGGG...CAGCAGCATCCTTGCAAGCAGGGAACTAGAGTAGAAGTTCAGTAGCCTCAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CAA 90 bp | TTGCAAGGATGCTGCTGCTGCGCTTCCCATAGCAACATCCTTGCATATGAGGAACCAGACAGCACAGTGTaGGCAAATAAATCCTTACGA | + |
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Preference number: 5 (lower is better) Translates to: LQGCCCCASHSNILAYEEPDSTV*ANKSLR Trigger: TCGTAAGGATTTATTTGCCAACACTGTGCTGTCTGG...TTCCTCATATGCAAGGATGTTGCTATGGGAAGCGCAGCAGCAGCATCCTTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CAA 90 bp | CCTTGTCACATATTTTCATGTAAGCAAGCCCACATTTCTTTGAGCCCTACAGGCTCCATATCATCCCAGTaGGTGACGACTCCGTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PCHIFSCKQAHISLSPTGSISSQ*VTTPCS Trigger: TGAACACGGAGTCGTCACCAACTGGGATGATATGGA...GCCTGTAGGGCTCAAAGAAATGTGGGCTTGCTTACATGAAAATATGTGACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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| CDS-3UTR CAA 90 bp | CCTTGTCACATATTTTCATGTAAGCAAGCCCACATTTCTTTGAGCCCTACAGGCATCCAAACCGAATACTaGCGTTCTGGGGGAGCTATG | + |
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Preference number: 5 (lower is better) Translates to: PCHIFSCKQAHISLSPTGIQTEY*RSGGAM Trigger: CATAGCTCCCCCAGAACGCAAGTATTCGGTTTGGAT...GCCTGTAGGGCTCAAAGAAATGTGGGCTTGCTTACATGAAAATATGTGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054716.4 |
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