Pregenerated sensors for ACSS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035948Ensembl transcript IDs: ENSMUST00000044668.5, ENSMUST00000165067.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTTGAAAACAAGAGGCTCTTGCAGTAAGGTAAAGCCTCTCTCCTaGGCCATATTTCTTTGGGATCTGATAGGGATGGCCCTTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LLKTRGSCSKVKPLS*AIFLWDLIGMALAG Trigger: TCCAGCAAGGGCCATCCCTATCAGATCCCAAAGAAATATGGCTCAGGAGAGAGGCTTTACCTTACTGCAAGAGCCTCTTGTTTTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR TCA 90 bp | CATGACAGGGGATTCCAGAAGTCTTCATCTCTTCAAAATATTTGGTaGATGCATTGGAAATTCTCTACCAGATACATGCCTCTCCTTACC | + |
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Preference number: 1 (lower is better) Translates to: HDRGFQKSSSLQNIW*MHWKFSTRYMPLLT Trigger: GGTAAGGAGAGGCATGTATCTGGTAGAGAATTTCCAATGCATTCACCAAATATTTTGAAGAGATGAAGACTTCTGGAATCCCCTGTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR GCA 90 bp | ACAGGGGATTCCAGAAGTCTTCATCTCTTCAAAATATTTGGTGAATaGATTGGAAATTCTCTACCAGATACATGCCTCTCCTTACCCAGT | + |
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Preference number: 1 (lower is better) Translates to: TGDSRSLHLFKIFGE*IGNSLPDTCLSLPS Trigger: ACTGGGTAAGGAGAGGCATGTATCTGGTAGAGAATTTCCAATGCATTCACCAAATATTTTGAAGAGATGAAGACTTCTGGAATCCCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR GCA 90 bp | TCATCTTTGTTTCATCAAATGAAAGACAACATCCTAATTACTACATaGCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: SSLFHQMKDNILITT*PRPCCFIPFWFPLY Trigger: ATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAATTAGGATGTTGTCTTTCATTTGATGAAACAAAGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| 3UTR CCA 90 bp | CAAGTAAGTTGCCATCTGTTAGTTCTCACCTATATTTCTTGTATTTaGATTTATCTGTTAGGACACAGACCAAAGAGGCCTAAAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: QVSCHLLVLTYISCI*IYLLGHRPKRPKMR Trigger: TCTCATTTTAGGCCTCTTTGGTCTGTGTCCTAACAGATAAATCCAAATACAAGAAATATAGGTGAGAACTAACAGATGGCAACTTACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTAGGGGTGCTCCACCCTaGGGTCCTGTGTTGCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: MGKYENDKLKVPGSCRESRGAPP*GPVLLS Trigger: GCTTAGCAACACAGGACCCCAGGGTGGAGCACCCCT...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR CAA 90 bp | CACAGAACTCTGGGTTCAACCCTTATGAGAGGAAAAAGTGCTAATTaGGAAGTAAACCCAGCAACTATGAGTAAGAGGCAGGAGGACCAG | + |
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Preference number: 2 (lower is better) Translates to: HRTLGSTLMRGKSAN*EVNPATMSKRQEDQ Trigger: CTGGTCCTCCTGCCTCTTACTCATAGTTGCTGGGTTTACTTCCAAATTAGCACTTTTTCCTCTCATAAGGGTTGAACCCAGAGTTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCAGCTCAGTAGAAGAGTaGTTATCTAACATGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: FSLRENNPCLLADVSPQISSVEE*LSNMHR Trigger: TCTGTGCATGTTAGATAAGCACTCTTCTACTGAGCT...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCGGGAAAATAACCCATaGTTACTTGCTGATGTATCC | + |
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Preference number: 2 (lower is better) Translates to: CLYLQERWLSSLKHKKNSRENNP*LLADVS Trigger: GGATACATCAGCAAGTAAGCATGGGTTATTTTCCCG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR TCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCAGGGGCTACTAGACTaGCAAAACACTACAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSQGLLD*QNTTAH Trigger: GTGAGCTGTAGTGTTTTGTCAGTCTAGTAGCCCCTG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCCAAAGAGGCCTAAAATaGGAGCCTTATGTAAGATAT | + |
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Preference number: 2 (lower is better) Translates to: FSLRENNPCLLADVSPQIQRGLK*EPYVRY Trigger: ATATCTTACATAAGGCTCTCATTTTAGGCCTCTTTG...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGACTACAGCTCACATCTaGGTTGATAAGGGATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LAIQVNVWGSLENKRLLQTTAHI*VDKGFC Trigger: ACAAAATCCCTTATCAACTCAGATGTGAGCTGTAGT...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCGCCTTATGTAAGATATaGATAGCTTTTATGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: FSLRENNPCLLADVSPQIALCKI*IAFMTS Trigger: ACTGGTCATAAAAGCTATGCATATCTTACATAAGGC...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCTCTGCAGCCCAAAGTTaGCTAAAAATGAGTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: CLYLQERWLSSLKHKKNSSAAQS*LKMSLY Trigger: ATAAAGACTCATTTTTAGGCAACTTTGGGCTGCAGA...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGAAAGTTAAGACCAAGTaGTTGAACGTAGGAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LAIQVNVWGSLENKRLLQKVKTK*LNVGSK Trigger: TTTGCTTCCTACGTTCAACCACTTGGTCTTAACTTT...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTCGTGCCTTTCCAATTaGAGGACATCCCTTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSSCLSN*RTSLDS Trigger: AGAATCAAGGGATGTCCTCCAATTGGAAAGGCACGA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTTGGGTTCAACCCTTATaGGAGGAAAAAGTGCTAATT | + |
|
Preference number: 2 (lower is better) Translates to: MGKYENDKLKVPGSCRESWVQPL*EEKVLI Trigger: AATTAGCACTTTTTCCTCTCATAAGGGTTGAACCCA...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTTCACTTGTTGGATTATaGACCACAAGAACCACTATA | + |
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Preference number: 2 (lower is better) Translates to: MGKYENDKLKVPGSCRESSLVGL*TTRTTI Trigger: TATAGTGGTTCTTGTGGTGCATAATCCAACAAGTGA...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CCA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCAGCATCTCCCACAATTaGCAACCACTAAAAGTATCT | + |
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Preference number: 2 (lower is better) Translates to: PCFADYEFIIRENQSKFISISHN*QPLKVS Trigger: AGATACTTTTAGTGGTTGCCAATTGTGGGAGATGCT...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| 3UTR-3UTR TCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTGCCATGAAAATGTATTaGCATTTAGCAGATGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSAMKMY*HLADGE Trigger: TTCACCATCTGCTAAATGTCAATACATTTTCATGGC...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTATTTTGATCAAAGTGTaGTTGATTCCTATCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: MGKYENDKLKVPGSCRESILIKV*LIPISR Trigger: TCTGGAGATAGGAATCAACCACACTTTGATCAAAAT...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCCCTGGGGTCCTGTGTaGCTAAGCAACCTACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: CLYLQERWLSSLKHKKNSPWGPV*LSNLLC Trigger: ACAGAGTAGGTTGCTTAGCAACACAGGACCCCAGGG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR GCA 72 bp | CTCATTGAGCACCAGTGGTACAGCTCAGTAGAAGAGTaGTTATCTAACATGCACAGAACTCTGGGTTCAACC | + |
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Preference number: 3 (lower is better) Translates to: LIEHQWYSSVEE*LSNMHRTLGST Trigger: GGTTGAACCCAGAGTTCTGTGCATGTTAGATAAGCACTCTTCTACTGAGCTGTACCACTGGTGCTCAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR CCA 72 bp | CACAGCCGTGATAACTGCCTCTATCTGCAGGAGAGATaGCTTTCCTCATTGAAACATAAGAAAAACAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: HSRDNCLYLQER*LSSLKHKKNSS Trigger: GGAGCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCAGTTATCACGGCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCCTCTGCAGCCCAAAGTaGCCTAAAAATGAGTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: FSLRENNPCLLADVSPQILCSPK*PKNESL Trigger: TAAAGACTCATTTTTAGGCAACTTTGGGCTGCAGAG...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR CCA 72 bp | AACCCATGCTTACTTGCTGATGTATCCCCTCAGATCTaGGAAAGAGGAAAATCTACATATGATCCAAAGATG | + |
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Preference number: 3 (lower is better) Translates to: NPCLLADVSPQI*ERGKSTYDPKM Trigger: CATCTTTGGATCATATGTAGATTTTCCTCTTTCCCAGATCTGAGGGGATACATCAGCAAGTAAGCATGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTATGTTTGGGGTTCTCTaGAAAACAAGAGGCTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: MGKYENDKLKVPGSCRESMFGVL*KTRGSC Trigger: GCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACAT...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR GCA 72 bp | AAAATGTTTCAATTTCTTATAGCATCCTTCTCGTCGTaGCTTTCCAATTGGAGGACATCCCTTGATTCTATC | + |
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Preference number: 3 (lower is better) Translates to: KMFQFLIASFSS*LSNWRTSLDSI Trigger: GATAGAATCAAGGGATGTCCTCCAATTGGAAAGGCACGACGAGAAGGATGCTATAAGAAATTGAAACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR CCA 72 bp | TGCCATCTGTTAGTTCTCACCTATATTTCTTGTATTTaGATTTATCTGTTAGGACACAGACCAAAGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: CHLLVLTYISCI*IYLLGHRPKRP Trigger: AGGCCTCTTTGGTCTGTGTCCTAACAGATAAATCCAAATACAAGAAATATAGGTGAGAACTAACAGATGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CAA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCACAACCACTGTTCAGTaGAGGGATTCATCAGATATG | + |
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Preference number: 3 (lower is better) Translates to: PCFADYEFIIRENQSKFITTTVQ*RDSSDM Trigger: CATATCTGATGAATCCCTCAACTGAACAGTGGTTGT...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| 3UTR-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTGGAAAAAGTGCTAATTaGGAAGTAAACCCAGCAACT | + |
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Preference number: 3 (lower is better) Translates to: MGKYENDKLKVPGSCRESGKSAN*EVNPAT Trigger: AGTTGCTGGGTTTACTTCCAAATTAGCACTTTTTCC...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR-3UTR CAA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCAGCTCACATCTGAGTaGATAAGGGATTTTGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSQLTSE*IRDFVS Trigger: TGAAACAAAATCCCTTATCAACTCAGATGTGAGCTG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR TCA 72 bp | TTACAGAAAAGAGGTAATTGTGCAAACTGGCTCACATaGAACAATATATATAGTCTCTTTCAGGGGCTACTA | + |
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Preference number: 3 (lower is better) Translates to: LQKRGNCANWLT*NNIYSLFQGLL Trigger: TAGTAGCCCCTGAAAGAGACTATATATATTGTTTCATGTGAGCCAGTTTGCACAATTACCTCTTTTCTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| 3UTR CCA 72 bp | CACCATCAAGGTGAATTTAAGTGTGGTCACATTTCTTaGATTGTATCATTGCGATCAAAGACACATTCAATT | + |
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Preference number: 3 (lower is better) Translates to: HHQGEFKCGHIS*IVSLRSKTHSI Trigger: AATTGAATGTGTCTTTGATCGCAATGATACAATCCAAGAAATGTGACCACACTTAAATTCACCTTGATGGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCGGTGGTCAGAGCCCTaGAGCCCCTGCCCCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSRWSEP*SPCPQT Trigger: GGTTTGGGGGCAGGGGCTGCAGGGCTCTGACCACCG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATACGGTGGTCAGAGCCCTaGAGCCCCTGCCCCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIRWSEP*SPCPQT Trigger: GGTTTGGGGGCAGGGGCTGCAGGGCTCTGACCACCG...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCGCCCCAGGGTCCTGTTaGCGGATGGCTCTAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: FSLRENNPCLLADVSPQIAPGSC*RMALIA Trigger: TGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGC...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR TCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCAGTGCTAAGGGGACGTaGCCTTTCAAGGGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSSAKGT*PFKGSS Trigger: GGAAGACCCCTTGAAAGGTCACGTCCCCTTAGCACT...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCACTCTGTCTGGCCTGTaGTGTCCTATCCTCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSLRENNPCLLADVSPQITLSGL*CPILRA Trigger: AGCTCTGAGGATAGGACAGCACAGGCCAGACAGAGT...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCCTTTCTTGACACCCTaGTTGACCAAGACACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSPFLTP*LTKTPA Trigger: GGCTGGTGTCTTGGTCAAGCAGGGTGTCAAGAAAGG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCAAGGCAGCCACTCCATaGTCTGCAAGCACACGGAAA | + |
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Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSKAATP*SASTRK Trigger: TTTCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTT...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAACTGCTTCCCCAAGGCTaGCCCAGGGTCCTGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKLLPQG*PRVLLT Trigger: CGTCAACAGGACCCTGGGGCAGCCTTGGGGAAGCAG...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| CDS-3UTR GCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCTGCTTCCCCAAGGCTaGCCCAGGGTCCTGTTGACG | + |
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Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSLLPQG*PRVLLT Trigger: CGTCAACAGGACCCTGGGGCAGCCTTGGGGAAGCAG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR TCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGTTGTCCAGTTCAACATaGCAGCATAGCCCCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LAIQVNVWGSLENKRLLQLSSST*QHSPQW Trigger: CCACTGGGGGCTATGCTGTCATGTTGAACTGGACAA...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS-3UTR GCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATACCTTTCTTGACACCCTaGTTGACCAAGACACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIPFLTP*LTKTPA Trigger: GGCTGGTGTCTTGGTCAAGCAGGGTGTCAAGAAAGG...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
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| CDS-3UTR GCA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAACTTGTCAGAGAGTACTaGTTCCCCAAGGCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: HILGENVFSISHNWQPLKLVREY*FPKAAP Trigger: TGGGGCAGCCTTGGGGAAGCAGTACTCTCTGACAAG...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGAGGGCTTGTACCAACTaGTCTGCTCAGCAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAIQVNVWGSLENKRLLQRACTN*SAQQLY Trigger: GTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCT...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCGCCCCAGGGTCCTGTTaGCGGATGGCTCTAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCFADYEFIIRENQSKFIAPGSC*RMALIA Trigger: TGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGC...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAACGGCGCCTGTTACTTTaGGACATTGCAACCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HILGENVFSISHNWQPLKRRLLL*DIATRM Trigger: CATCCTGGTTGCAATGTCGCAAAGTAACAGGCGCCG...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCTATGAGACTGTGGATTaGTCCTATCCTTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSYETVD*SYPCTR Trigger: GCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATA...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGACTCTGTCTGGCCTGTaGTGTCCTATCCTCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLTLSGL*CPILRA Trigger: AGCTCTGAGGATAGGACAGCACAGGCCAGACAGAGT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGAAGGCAGCCACTCCATaGTCTGCAAGCACACGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLKAATP*SASTRK Trigger: TTTCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCTTGTCAGAGAGTACTaGTTCCCCAAGGCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESLVREY*FPKAAP Trigger: TGGGGCAGCCTTGGGGAAGCAGTACTCTCTGACAAG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCGATCCAGTCTCTGTTTaGCACCAATGGTCTAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSDPVSV*HQWSRT Trigger: CGTTCTAGACCATTGGTGGCAAACAGAGACTGGATC...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCGCAGTCAGCCACAGTaGCGTGTGAGAGGACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSRSQPQ*RVRGLT Trigger: AGTCAGTCCTCTCACACGGCACTGTGGCTGACTGCG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCGGCTCTAATTGCAGTTaGTGCTGTAAACAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLQERWLSSLKHKKNSGSNCS*CCKQGS Trigger: GCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCC...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATATCTGTTTGCCACCAATaGTCTAGAACGGGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFISVCHQ*SRTGTR Trigger: CCGAGTTCCCGTTCTAGACCATTGGTGGCAAACAGA...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAAAGGGCTTGTACCAACTaGTCTGCTCAGCAGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HILGENVFSISHNWQPLKRACTN*SAQQLY Trigger: GTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCT...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCGGCGCCTGTTACTTTaGGACATTGCAACCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESRRLLL*DIATRM Trigger: CATCCTGGTTGCAATGTCGCAAAGTAACAGGCGCCG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAGTCAGCCACAGAGGCTaGGAAGTGGGTCTTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKVSHRG*EVGLVL Trigger: GAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGAC...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATATTGTACCAACTGATCTaGTCAGCAGCTTTACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFILYQLI*SAALPQ Trigger: CTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAA...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGTTGTACCAACTGATCTaGTCAGCAGCTTTACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAIQVNVWGSLENKRLLQLYQLI*SAALPQ Trigger: CTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAA...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAATGGAAGGCGGGTATCTaGTCTCTAGAGTTTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HILGENVFSISHNWQPLKWKAGI*SLEFWS Trigger: GGACCAAAACTCTAGAGAGCAGATACCCGCCTTCCA...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGAGCCACTCCATGCTCTaGAAGCACACGGAAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLSHSML*KHTEIS Trigger: GCTTATTTCCGTGTGCTTGCAGAGCATGGAGTGGCT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATATGGAACACATTTTCCTaGTTGTCCTGGTGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIWNTFS*LSWWRC Trigger: ACACCTCCACCAGGACAAGCAGGAAAATGTGTTCCA...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| 3UTR CAA 72 bp | CTGGGTTCAACCCTTATGAGAGGAAAAAGTGCTAATTaGGAAGTAAACCCAGCAACTATGAGTAAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSTLMRGKSAN*EVNPATMSKRQ Trigger: CTGCCTCTTACTCATAGTTGCTGGGTTTACTTCCAAATTAGCACTTTTTCCTCTCATAAGGGTTGAACCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| 3UTR CAA 72 bp | ATAGATTCTCTCTACGGGAAAATAACCCATGCTTACTaGCTGATGTATCCCCTCAGATCTGGGAAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IDSLYGKITHAY*LMYPLRSGKEE Trigger: TTCCTCTTTCCCAGATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAATTGTCCAGTTCAACATaGCAGCATAGCCCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKLSSST*QHSPQW Trigger: CCACTGGGGGCTATGCTGTCATGTTGAACTGGACAA...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTGGCCTGCAACGTTTATaGCATCATCCACTCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSGLQRL*HHPLGT Trigger: TGTCCCGAGTGGATGATGTCATAAACGTTGCAGGCC...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTTGGAAGGCGGGTATCTaGTCTCTAGAGTTTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESWKAGI*SLEFWS Trigger: GGACCAAAACTCTAGAGAGCAGATACCCGCCTTCCA...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATATCTAATTGCAGTTGGTaGTGTAAACAAGGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFISNCSW*CKQGSH Trigger: GTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGA...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGTCTAATTGCAGTTGGTaGTGTAAACAAGGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAIQVNVWGSLENKRLLQSNCSW*CKQGSH Trigger: GTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGA...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGTGCTCTCTAGAGTTTTaGTCCAGGGCTTGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLCSLEF*SRACTN Trigger: GTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCA...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATAGCAATCTTATCCCCTTaGCCATTTTCAATGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIAILSP*PFSMCR Trigger: TCGGCACATTGAAAATGGCCAAGGGGATAAGATTGC...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATACAAATCCTCCAAATATaGGACTGTGGATTGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIQILQI*DCGLLL Trigger: TAGGAGCAATCCACAGTCTCATATTTGGAGGATTTG...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATAATCAAGATCACGACCTaGCATCAAAGGAACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIIKITT*HQRNFL Trigger: GAGAAAGTTCCTTTGATGTCAGGTCGTGATCTTGAT...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTAGCACTTCTTCAATGTaGCCAAAAATGCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESSTSSM*PKMLGS Trigger: GGACCCCAGCATTTTTGGTCACATTGAAGAAGTGCT...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTAGCCACTCCATGCTCTaGAAGCACACGGAAATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSSHSML*KHTEIS Trigger: GCTTATTTCCGTGTGCTTGCAGAGCATGGAGTGGCT...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGACGGATGGCTCTAATTaGAGTTGGTGCTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LAIQVNVWGSLENKRLLQTDGSN*SWCCKQ Trigger: TTGTTTACAGCACCAACTGCAATTAGAGCCATCCGT...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGAGGAGTCAGAGACTCTaGAGAATGATGAAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLRSQRL*RMMKQV Trigger: TACCTGCTTCATCATTCTGCAGAGTCTCTGACTCCT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTCTGTTTGCCACCAATaGTCTAGAACGGGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSSVCHQ*SRTGTR Trigger: CCGAGTTCCCGTTCTAGACCATTGGTGGCAAACAGA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCTATGAGACTGTGGATTaGTCCTATCCTTGCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: PCFADYEFIIRENQSKFIYETVD*SYPCTR Trigger: GCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATA...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGACGGATGGCTCTAATTaGAGTTGGTGCTGTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLTDGSN*SWCCKQ Trigger: TTGTTTACAGCACCAACTGCAATTAGAGCCATCCGT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAGATCCAGTCTCTGTTTaGCACCAATGGTCTAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKDPVSV*HQWSRT Trigger: CGTTCTAGACCATTGGTGGCAAACAGAGACTGGATC...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTGGAACACATTTTCCTaGTTGTCCTGGTGGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSWNTFS*LSWWRC Trigger: ACACCTCCACCAGGACAAGCAGGAAAATGTGTTCCA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTGCTCTCTAGAGTTTTaGTCCAGGGCTTGTACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSCSLEF*SRACTN Trigger: GTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTGCAATCTTATCCCCTTaGCCATTTTCAATGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESAILSP*PFSMCR Trigger: TCGGCACATTGAAAATGGCCAAGGGGATAAGATTGC...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGCCAAATATGAGACTGTaGATTGCTCCTATCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLPNMRL*IAPILA Trigger: TGCAAGGATAGGAGCAATCCACAGTCTCATATTTGG...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAGGCTCTAATTGCAGTTaGTGCTGTAAACAAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKGSNCS*CCKQGS Trigger: GCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCC...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAATCGTCCATTGTATCCTaGAACACATTTTCCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HILGENVFSISHNWQPLKSSIVS*NTFSCL Trigger: CAAGCAGGAAAATGTGTTCCAGGATACAATGGACGA...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCCTGCAGAAATCCTGTaGCCTGCAACGTTTATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSPAEIL*PATFMT Trigger: TGTCATAAACGTTGCAGGCCACAGGATTTCTGCAGG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCAAATCCTCCAAATATaGGACTGTGGATTGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESQILQI*DCGLLL Trigger: TAGGAGCAATCCACAGTCTCATATTTGGAGGATTTG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAATGGTTCAATGCCAAATaGTGCCGTAACAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKWFNAK*CRNNHL Trigger: AAGGTGGTTGTTACGGCATCATTTGGCATTGAACCA...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCAGCATGGTATATATTaGTTGTGGGATCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESQHGIY*LWDHGH Trigger: ATGCCCATGATCCCACAAGCAATATATACCATGCTG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTACAGGGCCAATGCTCTaGCTAACATGTTTCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSTGPML*LTCFTI Trigger: GATTGTGAAACATGTTAGGCAGAGCATTGGCCCTGT...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCCAAATATGAGACTGTaGATTGCTCCTATCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MGKYENDKLKVPGSCRESPNMRL*IAPILA Trigger: TGCAAGGATAGGAGCAATCCACAGTCTCATATTTGG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAATTTTCCTGCTTGTCCTaGTGGAGGTGTTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKFSCLS*WRCFGV Trigger: AACTCCAAAACACCTCCACCAGGACAAGCAGGAAAA...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTTTTCCTGCTTGTCCTaGTGGAGGTGTTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSFSCLS*WRCFGV Trigger: AACTCCAAAACACCTCCACCAGGACAAGCAGGAAAA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTATCAAGATCACGACCTaGCATCAAAGGAACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSIKITT*HQRNFL Trigger: GAGAAAGTTCCTTTGATGTCAGGTCGTGATCTTGAT...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR TCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAATACCTCTCCAGGTTTaGGTCCATATATGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKIPLQV*VHIWKT Trigger: TGTCTTCCATATATGGACTCAAACCTGGAGAGGTAT...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR TCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTATACCTCTCCAGGTTTaGGTCCATATATGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSIPLQV*VHIWKT Trigger: TGTCTTCCATATATGGACTCAAACCTGGAGAGGTAT...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR GCA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCCAGCATGGTATATATTaGTTGTGGGATCATGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCFADYEFIIRENQSKFIQHGIY*LWDHGH Trigger: ATGCCCATGATCCCACAAGCAATATATACCATGCTG...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAACTGGTGGAGGTGTTTTaGAGTTACCTAATCCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TDIKLITFPCVSRGHYWKLVEVF*SYLIQY Trigger: GTATTGGATTAGGTAACTCCAAAACACCTCCACCAG...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CCA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCTGGTGGAGGTGTTTTaGAGTTACCTAATCCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSLVEVF*SYLIQY Trigger: GTATTGGATTAGGTAACTCCAAAACACCTCCACCAG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| 3UTR CAA 72 bp | CAGGGGATTCCAGAAGTCTTCATCTCTTCAAAATATTaGGTGAATGCATTGGAAATTCTCTACCAGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGIPEVFISSKY*VNALEILYQIH Trigger: ATGTATCTGGTAGAGAATTTCCAATGCATTCACCAAATATTTTGAAGAGATGAAGACTTCTGGAATCCCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CCA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCGGTATATATTGCTTGTaGGATCATGGGCATATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCFADYEFIIRENQSKFIGIYCL*DHGHID Trigger: ATCTATATGCCCATGATCCCACAAGCAATATATACC...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS TCA 90 bp | AAACCCGGCCACCAAAGCCCTTCGGGTCACAGCGGCTCCTCTTACTaGAGGGGATCCTGGCAGAGGTGCCCCAAGCGTCCCGGCGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KPGHQSPSGHSGSSY*RGSWQRCPKRPGAC Trigger: ACAGGCGCCGGGACGCTTGGGGCACCTCTGCCAGGATCCCCTTCAGTAAGAGGAGCCGCTGTGACCCGAAGGGCTTTGGTGGCCGGGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 90 bp | GCTTTACCCCAGAATCTTTCGGGGTCAGCCACAGAGGCTGCGAAGTaGGTCTTGTACTCACCACCACTGCCGGTGGTCAGAGCCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPQNLSGSATEAAK*VLYSPPLPVVRALQ Trigger: CTGCAGGGCTCTGACCACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAGATTCTGGGGTAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | CTCAGCAGCTTTACCCCAGAATCTTTCGGGGTCAGCCACAGAGGCTaGGAAGTGGGTCTTGTACTCACCACCACTGCCGGTGGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSFTPESFGVSHRG*EVGLVLTTTAGGQS Trigger: GCTCTGACCACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAGATTCTGGGGTAAAGCTGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | ACACGCAGAGTGCTAAGGGGACGTGACCTTTCAAGGGGTCTTCCTTaGCAACCACAGCGCAGTCAGCCACAGTGCCGTGTGAGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: TRRVLRGRDLSRGLP*QPQRSQPQCRVRGL Trigger: CAGTCCTCTCACACGGCACTGTGGCTGACTGCGCTGTGGTTGGCAAGGAAGACCCCTTGAAAGGTCACGTCCCCTTAGCACTCTGCGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | GGCTGCCCCAGGGTCCTGTTGACGGATGGCTCTAATTGCAGTTGGTaGTGTAAACAAGGCAGCCACTCCATGCTCTGCAAGCACACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCPRVLLTDGSNCSW*CKQGSHSMLCKHTE Trigger: TTCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 90 bp | CAAGGCTGCCCCAGGGTCCTGTTGACGGATGGCTCTAATTGCAGTTaGTGCTGTAAACAAGGCAGCCACTCCATGCTCTGCAAGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: QGCPRVLLTDGSNCS*CCKQGSHSMLCKHT Trigger: CGTGTGCTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCAGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS TCA 90 bp | GATGCATTTACGTCTTTCTTCAACACGCAGAGTGCTAAGGGGACGTaGCCTTTCAAGGGGTCTTCCTTGCCAACCACAGCGCAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DAFTSFFNTQSAKGT*PFKGSSLPTTAQSA Trigger: GGCTGACTGCGCTGTGGTTGGCAAGGAAGACCCCTTGAAAGGTCACGTCCCCTTAGCACTCTGCGTGTTGAAGAAAGACGTAAATGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | TCTAATTGCAGTTGGTGCTGTAAACAAGGCAGCCACTCCATGCTCTaGAAGCACACGGAAATAAGCGCCAGCATCCGGTGTTCCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SNCSWCCKQGSHSML*KHTEISASIRCSHR Trigger: CCTGTGGGAACACCGGATGCTGGCGCTTATTTCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | AAACAGTGTCTTGAACCTTGTCAGAGAGTACTGCTTCCCCAAGGCTaGCCCAGGGTCCTGTTGACGGATGGCTCTAATTGCAGTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQCLEPCQRVLLPQG*PRVLLTDGSNCSWC Trigger: GCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCAGCCTTGGGGAAGCAGTACTCTCTGACAAGGTTCAAGACACTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 90 bp | CCGTGTGAGAGGACTGACTCCTCAATAGCGCCTGCAGAAATCCTGTaGCCTGCAACGTTTATGACATCATCCACTCGGGACATCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: PCERTDSSIAPAEIL*PATFMTSSTRDITY Trigger: ATATGTGATGTCCCGAGTGGATGATGTCATAAACGTTGCAGGCCACAGGATTTCTGCAGGCGCTATTGAGGAGTCAGTCCTCTCACACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCTGCCCCAGGGTCCTGTaGACGGATGGCTCTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSLRENNPCLLADVSPQICPRVL*TDGSNC Trigger: GCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCA...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS TCA 90 bp | CAGCCCAGTTGTTCCAGATGTGTAGAGAATGTACAATGGATGCTCTaGGAGAACAGGCACGCAGTCATGAGACTGGGCTTTTGCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPSCSRCVENVQWML*ENRHAVMRLGFCHF Trigger: GAAATGGCAAAAGCCCAGTCTCATGACTGCGTGCCTGTTCTCTCAGAGCATCCATTGTACATTCTCTACACATCTGGAACAACTGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS TCA 90 bp | CTGGTGGAGGTGTTTTGGAGTTACCTAATCCAATACATGATGCTGTaGTGGGGGATCCAGTCTCTGTTTGCCACCAATGGTCTAGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LVEVFWSYLIQYMML*WGIQSLFATNGLER Trigger: CCGTTCTAGACCATTGGTGGCAAACAGAGACTGGATCCCCCATCACAGCATCATGTATTGGATTAGGTAACTCCAAAACACCTCCACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTACGGGAAAATAACCCATGCTTACTTGCTGATGTATCCCCTCAGATCTTCTTGACACCCTGCTaGACCAAGACACCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSLRENNPCLLADVSPQIFLTPC*TKTPAS Trigger: GCTGGCTGGTGTCTTGGTCAAGCAGGGTGTCAAGAA...GATCTGAGGGGATACATCAGCAAGTAAGCATGGGTTATTTTCCCGTAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATATGCCCCAGGGTCCTGTaGACGGATGGCTCTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHAPGHVVLYPSGFLFICPRVL*TDGSNC Trigger: GCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCA...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS GCA 90 bp | ACTGTGGATTGCTCCTATCCTTGCACACGCCAGCATGGTATATATTaGTTGTGGGATCATGGGCATATAGATGACCACTGTATCGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVDCSYPCTRQHGIY*LWDHGHIDDHCIAF Trigger: AAAGGCGATACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 90 bp | GGATGCAAATCCTCCAAATATGAGACTGTGGATTGCTCCTATCCTTaGACACGCCAGCATGGTATATATTGCTTGTGGGATCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCKSSKYETVDCSYP*TRQHGIYCLWDHGH Trigger: ATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATATTTGGAGGATTTGCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 90 bp | GATTGCTCCTATCCTTGCACACGCCAGCATGGTATATATTGCTTGTaGGATCATGGGCATATAGATGACCACTGTATCGCCTTTCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DCSYPCTRQHGIYCL*DHGHIDDHCIAFLD Trigger: GTCAAGAAAGGCGATACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTGCTGCGAAGTGGGTCTaGTACTCACCACCACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MGKYENDKLKVPGSCRESAAKWV*YSPPLP Trigger: CGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGC...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAGCTGCGAAGTGGGTCTaGTACTCACCACCACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TDIKLITFPCVSRGHYWKAAKWV*YSPPLP Trigger: CGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGC...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCGTAGACCGTGGAATTTaGCCAGACCTGGTTTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLYLQERWLSSLKHKKNSVDRGI*PDLVLG Trigger: ACCCAAAACCAGGTCTGGCAAAATTCCACGGTCTAC...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCACTCGGAAGACTTTTTaGGACCATTCTAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLYLQERWLSSLKHKKNSTRKTF*DHSRVS Trigger: GGAGACCCTAGAATGGTCCAAAAAAGTCTTCCGAGT...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCTTCTTGACACCCTGCTaGACCAAGACACCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCFADYEFIIRENQSKFIFLTPC*TKTPAS Trigger: GCTGGCTGGTGTCTTGGTCAAGCAGGGTGTCAAGAA...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCATACCTCTCCAGGTTaGAGTCCATATATGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLYLQERWLSSLKHKKNSHTSPG*SPYMED Trigger: GTCTTCCATATATGGACTCAAACCTGGAGAGGTATG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCCTGGTGGAGGTGTTTaGGAGTTACCTAATCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: CLYLQERWLSSLKHKKNSPGGGV*ELPNPI Trigger: TATTGGATTAGGTAACTCCAAAACACCTCCACCAGG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTTCAAGGGGTCTTCCTaGCCAACCACAGCGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSFKGSS*PTTAQS Trigger: TGACTGCGCTGTGGTTGGCAAGGAAGACCCCTTGAA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | CTTGCAATACAAGTAAATGTTTGGGGTTCTCTTGAAAACAAGAGGCTCTTGCAGCATGAGACTGGGCTTTaGCCATTTCTTCTTCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LAIQVNVWGSLENKRLLQHETGL*PFLLPN Trigger: ATTGGGAAGAAGAAATGGCAAAAGCCCAGTCTCATG...CTGCAAGAGCCTCTTGTTTTCAAGAGAACCCCAAACATTTACTTGTATTGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TTACTACATGCCCCAGGCCATGTTGTTTTATACCCTTCTGGTTTCCTCTTTATACATACCTCTCCAGGTTaGAGTCCATATATGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLHAPGHVVLYPSGFLFIHTSPG*SPYMED Trigger: GTCTTCCATATATGGACTCAAACCTGGAGAGGTATG...TATAAAGAGGAAACCAGAAGGGTATAAAACAACATGGCCTGGGGCATGTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGACTCGGAAGACTTTTTaGGACCATTCTAGGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLTRKTF*DHSRVS Trigger: GGAGACCCTAGAATGGTCCAAAAAAGTCTTCCGAGT...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAGTTTTGGTCCAGGGCTaGTACCAACTGATCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TDIKLITFPCVSRGHYWKVLVQG*YQLICS Trigger: TGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAAC...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTGTTTTGGTCCAGGGCTaGTACCAACTGATCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSVLVQG*YQLICS Trigger: TGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAAC...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | TTAACACAAAGCAAGTTTTCTGATCAAAGAGTGAGGACAACCACTGTTCAGTTGCATGAGACTGGGCTTTaGCCATTTCTTCTTCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LTQSKFSDQRVRTTTVQLHETGL*PFLLPN Trigger: ATTGGGAAGAAGAAATGGCAAAAGCCCAGTCTCATG...CAACTGAACAGTGGTTGTCCTCACTCTTTGATCAGAAAACTTGCTTTGTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | TGCCTCTATCTGCAGGAGAGATGGCTTTCCTCATTGAAACATAAGAAAAACAGCCCTCATATAAAACTGTaGTGTTTCCATGGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLYLQERWLSSLKHKKNSPHIKL*CFHGEE Trigger: CTCTTCTCCATGGAAACACAACAGTTTTATATGAGG...GCTGTTTTTCTTATGTTTCAATGAGGAAAGCCATCTCTCCTGCAGATAGAGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAACCTGGTGGAGGTGTTTaGGAGTTACCTAATCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: HILGENVFSISHNWQPLKPGGGV*ELPNPI Trigger: TATTGGATTAGGTAACTCCAAAACACCTCCACCAGG...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAAAGCAATCTTATCCCCTaGGCCATTTTCAATGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TDIKLITFPCVSRGHYWKSNLIP*AIFNVP Trigger: CGGCACATTGAAAATGGCCAAGGGGATAAGATTGCT...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTAACACATTTTCCTGCTaGTCCTGGTGGAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MGKYENDKLKVPGSCRESNTFSC*SWWRCF Trigger: AAAACACCTCCACCAGGACAAGCAGGAAAATGTGTT...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAACATGGTATATATTGCTaGTGGGATCATGGGCATATA | + |
|
Preference number: 5 (lower is better) Translates to: HILGENVFSISHNWQPLKHGIYC*WDHGHI Trigger: TATATGCCCATGATCCCACAAGCAATATATACCATG...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | CATATACTAGGGGAAAATGTGTTTAGCATCTCCCACAATTGGCAACCACTAAAACGCGTACTTAATTCTTaGGATGCAAATCCTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HILGENVFSISHNWQPLKRVLNS*DANPPN Trigger: ATTTGGAGGATTTGCATCCAAAGAATTAAGTACGCG...TTTTAGTGGTTGCCAATTGTGGGAGATGCTAAACACATTTTCCCCTAGTATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCAACACATTTTCCTGCTaGTCCTGGTGGAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCFADYEFIIRENQSKFINTFSC*SWWRCF Trigger: AAAACACCTCCACCAGGACAAGCAGGAAAATGTGTT...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTCATGGTATATATTGCTaGTGGGATCATGGGCATATA | + |
|
Preference number: 5 (lower is better) Translates to: MGKYENDKLKVPGSCRESHGIYC*WDHGHI Trigger: TATATGCCCATGATCCCACAAGCAATATATACCATG...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | CCGTGTTTTGCTGATTATGAGTTCATTATAAGAGAAAACCAGTCCAAATTCATCAGCAGGTATCGTCCATaGTATCCTGGAACACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCFADYEFIIRENQSKFISRYRP*YPGTHF Trigger: AAAATGTGTTCCAGGATACAATGGACGATACCTGCT...GATGAATTTGGACTGGTTTTCTCTTATAATGAACTCATAATCAGCAAAACACGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTCGCGTACTTAATTCTTaGGATGCAAATCCTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSRVLNS*DANPPN Trigger: ATTTGGAGGATTTGCATCCAAAGAATTAAGTACGCG...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | ACCGATATTAAATTAATCACTTTCCCTTGTGTTTCTAGAGGGCACTATTGGAAACCTCATATAAAACTGTaGTGTTTCCATGGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TDIKLITFPCVSRGHYWKPHIKL*CFHGEE Trigger: CTCTTCTCCATGGAAACACAACAGTTTTATATGAGG...TTTCCAATAGTGCCCTCTAGAAACACAAGGGAAAGTGATTAATTTAATATCGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044668.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGCAAATACGAAAATGACAAACTTAAAGTACCTGGTTCATGTCGAGAAAGTTCAAAGTATAAATGCTaGAATGCTTCCTGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: MGKYENDKLKVPGSCRESSKYKC*NASWFF Trigger: GAAGAACCAGGAAGCATTCAAGCATTTATACTTTGA...ACTTTCTCGACATGAACCAGGTACTTTAAGTTTGTCATTTTCGTATTTGCCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS-3UTR CAA 90 bp | GTTACTTATCCATTTTTCATCTATTTGGACTATTCTGTGAGGACATCATGCTCTTCTAGCCTTCAGTTTTaGCATGTTGTCATCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VTYPFFIYLDYSVRTSCSSSLQF*HVVIQN Trigger: ATTTTGGATGACAACATGCAAAAACTGAAGGCTAGA...AGAGCATGATGTCCTCACAGAATAGTCCAAATAGATGAAAAATGGATAAGTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS GCA 72 bp | TCTTGTACTCACCACCACTGCCGGTGGTCAGAGCCCTaGAGCCCCTGCCCCCAAACCCGGCCACCAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SCTHHHCRWSEP*SPCPQTRPPKP Trigger: GGGCTTTGGTGGCCGGGTTTGGGGGCAGGGGCTGCAGGGCTCTGACCACCGGCAGTGGTGGTGAGTACAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS TCA 72 bp | CACCAAAGCCCTTCGGGTCACAGCGGCTCCTCTTACTaGAGGGGATCCTGGCAGAGGTGCCCCAAGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: HQSPSGHSGSSY*RGSWQRCPKRP Trigger: GGGACGCTTGGGGCACCTCTGCCAGGATCCCCTTCAGTAAGAGGAGCCGCTGTGACCCGAAGGGCTTTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 72 bp | CTTTCGGGGTCAGCCACAGAGGCTGCGAAGTGGGTCTaGTACTCACCACCACTGCCGGTGGTCAGAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSGSATEAAKWV*YSPPLPVVRAL Trigger: CAGGGCTCTGACCACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CCA 72 bp | CAGAATCTTTCGGGGTCAGCCACAGAGGCTGCGAAGTaGGTCTTGTACTCACCACCACTGCCGGTGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QNLSGSATEAAK*VLYSPPLPVVR Trigger: TCTGACCACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAGATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 72 bp | TTTACCCCAGAATCTTTCGGGGTCAGCCACAGAGGCTaGGAAGTGGGTCTTGTACTCACCACCACTGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: FTPESFGVSHRG*EVGLVLTTTAG Trigger: ACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAGATTCTGGGGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | GGCTGCCCCAGGGTCCTGTTGACGGATGGCTCTAATTaGAGTTGGTGCTGTAAACAAGGCAGCCACTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GCPRVLLTDGSN*SWCCKQGSHSM Trigger: CATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 72 bp | CTTGAACCTTGTCAGAGAGTACTGCTTCCCCAAGGCTaGCCCAGGGTCCTGTTGACGGATGGCTCTAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEPCQRVLLPQG*PRVLLTDGSNC Trigger: GCAATTAGAGCCATCCGTCAACAGGACCCTGGGGCAGCCTTGGGGAAGCAGTACTCTCTGACAAGGTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 72 bp | CCCAGGGTCCTGTTGACGGATGGCTCTAATTGCAGTTaGTGCTGTAAACAAGGCAGCCACTCCATGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRVLLTDGSNCS*CCKQGSHSMLC Trigger: GCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS TCA 72 bp | ACGTCTTTCTTCAACACGCAGAGTGCTAAGGGGACGTaGCCTTTCAAGGGGTCTTCCTTGCCAACCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TSFFNTQSAKGT*PFKGSSLPTTA Trigger: CGCTGTGGTTGGCAAGGAAGACCCCTTGAAAGGTCACGTCCCCTTAGCACTCTGCGTGTTGAAGAAAGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS GCA 72 bp | AGTTGGTGCTGTAAACAAGGCAGCCACTCCATGCTCTaGAAGCACACGGAAATAAGCGCCAGCATCCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SWCCKQGSHSML*KHTEISASIRC Trigger: ACACCGGATGCTGGCGCTTATTTCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 72 bp | GGCGGGTATCTGCTCTCTAGAGTTTTGGTCCAGGGCTaGTACCAACTGATCTGCTCAGCAGCTTTACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GGYLLSRVLVQG*YQLICSAALPQ Trigger: CTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCAGATACCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | AGGGTCCTGTTGACGGATGGCTCTAATTGCAGTTGGTaGTGTAAACAAGGCAGCCACTCCATGCTCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVLLTDGSNCSW*CKQGSHSMLCK Trigger: CTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCAACAGGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CCA 72 bp | AGGACTGACTCCTCAATAGCGCCTGCAGAAATCCTGTaGCCTGCAACGTTTATGACATCATCCACTCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RTDSSIAPAEIL*PATFMTSSTRD Trigger: GTCCCGAGTGGATGATGTCATAAACGTTGCAGGCCACAGGATTTCTGCAGGCGCTATTGAGGAGTCAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS CAA 90 bp | CTTGTGGAAGGCGGGTATCTGCTCTCTAGAGTTTTGGTCCAGGGCTaGTACCAACTGATCTGCTCAGCAGCTTTACCCCAGAATCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LVEGGYLLSRVLVQG*YQLICSAALPQNLS Trigger: CGAAAGATTCTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCAGATACCCGCCTTCCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | TCCCTTCCACAAACCAACTTGTGGAAGGCGGGTATCTaGTCTCTAGAGTTTTGGTCCAGGGCTTGTACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLPQTNLWKAGI*SLEFWSRACTN Trigger: GTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCAGATACCCGCCTTCCACAAGTTGGTTTGTGGAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS TCA 72 bp | TGCTCTCTAGAGTTTTGGTCCAGGGCTTGTACCAACTaGTCTGCTCAGCAGCTTTACCCCAGAATCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLEFWSRACTN*SAQQLYPRIFR Trigger: CCGAAAGATTCTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | ATACATGATGCTGTGATGGGGGATCCAGTCTCTGTTTaGCACCAATGGTCTAGAACGGGAACTCGGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: IHDAVMGDPVSV*HQWSRTGTRKT Trigger: AGTCTTCCGAGTTCCCGTTCTAGACCATTGGTGGCAAACAGAGACTGGATCCCCCATCACAGCATCATGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS TCA 72 bp | GATGTACTCCACCTTCCTTCCTGGTTCAATGCCAAATaGTGCCGTAACAACCACCTTAGGCTTCGCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: DVLHLPSWFNAK*CRNNHLRLRMI Trigger: GATCATGCGAAGCCTAAGGTGGTTGTTACGGCATCATTTGGCATTGAACCAGGAAGGAAGGTGGAGTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 72 bp | TCCACATCACATCTTTCCCCAGCTACAAACAGTGTCTaGAACCTTGTCAGAGAGTACTGCTTCCCCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: STSHLSPATNSV*NLVREYCFPKA Trigger: AGCCTTGGGGAAGCAGTACTCTCTGACAAGGTTCAAGACACTGTTTGTAGCTGGGGAAAGATGTGATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 90 bp | TCTGTTTGCCACCAATGGTCTAGAACGGGAACTCGGAAGACTTTTTaGGACCATTCTAGGGTCTCCACATCACATCTTTCCCCAGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SVCHQWSRTGTRKTF*DHSRVSTSHLSPAT Trigger: TGTAGCTGGGGAAAGATGTGATGTGGAGACCCTAGAATGGTCCAAAAAAGTCTTCCGAGTTCCCGTTCTAGACCATTGGTGGCAAACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 90 bp | GTGGATTGCTCCTATCCTTGCACACGCCAGCATGGTATATATTGCTaGTGGGATCATGGGCATATAGATGACCACTGTATCGCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VDCSYPCTRQHGIYC*WDHGHIDDHCIAFL Trigger: AAGAAAGGCGATACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS TCA 72 bp | TGTTCCAGATGTGTAGAGAATGTACAATGGATGCTCTaGGAGAACAGGCACGCAGTCATGAGACTGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSRCVENVQWML*ENRHAVMRLGF Trigger: AAAGCCCAGTCTCATGACTGCGTGCCTGTTCTCTCAGAGCATCCATTGTACATTCTCTACACATCTGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | TGCTCCTATCCTTGCACACGCCAGCATGGTATATATTaGTTGTGGGATCATGGGCATATAGATGACCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSYPCTRQHGIY*LWDHGHIDDHC Trigger: ACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CCA 72 bp | GACTGTGGATTGCTCCTATCCTTGCACACGCCAGCATaGTATATATTGCTTGTGGGATCATGGGCATATAGA | + |
|
Preference number: 6 (lower is better) Translates to: DCGLLLSLHTPA*YILLVGSWAYR Trigger: TCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CAA 72 bp | CCATTAACCAGGGCAGACAGTGTAGACCGTGGAATTTaGCCAGACCTGGTTTTGGGTAACTGTTTGACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PLTRADSVDRGI*PDLVLGNCLTK Trigger: TTTCGTCAAACAGTTACCCAAAACCAGGTCTGGCAAAATTCCACGGTCTACACTGTCTGCCCTGGTTAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS CAA 90 bp | TTGTATCCTGGAACACATTTTCCTGCTTGTCCTGGTGGAGGTGTTTaGGAGTTACCTAATCCAATACATGATGCTGTGATGGGGGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYPGTHFPACPGGGV*ELPNPIHDAVMGDP Trigger: TGGATCCCCCATCACAGCATCATGTATTGGATTAGGTAACTCCAAAACACCTCCACCAGGACAAGCAGGAAAATGTGTTCCAGGATACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS TCA 72 bp | GTGTTTTGGAGTTACCTAATCCAATACATGATGCTGTaGTGGGGGATCCAGTCTCTGTTTGCCACCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFWSYLIQYMML*WGIQSLFATNG Trigger: ACCATTGGTGGCAAACAGAGACTGGATCCCCCATCACAGCATCATGTATTGGATTAGGTAACTCCAAAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 72 bp | TCCTCCAAATATGAGACTGTGGATTGCTCCTATCCTTaGACACGCCAGCATGGTATATATTGCTTGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SSKYETVDCSYP*TRQHGIYCLWD Trigger: ATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATATTTGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS GCA 72 bp | ACCGCATTTCGAAAAGCAGCCACAGGGCCAATGCTCTaGCTAACATGTTTCACAATCTCTTCCAAAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TAFRKAATGPML*LTCFTISSKTC Trigger: ACAAGTTTTGGAAGAGATTGTGAAACATGTTAGGCAGAGCATTGGCCCTGTGGCTGCTTTTCGAAATGCGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
||
| CDS CAA 72 bp | TGTAACAAATGTTCAGCATCCCTTCCACAAACCAACTaGTGGAAGGCGGGTATCTGCTCTCTAGAGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CNKCSASLPQTN*WKAGICSLEFW Trigger: CCAAAACTCTAGAGAGCAGATACCCGCCTTCCACAAGTTGGTTTGTGGAAGGGATGCTGAACATTTGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CAA 72 bp | TCCTATCCTTGCACACGCCAGCATGGTATATATTGCTaGTGGGATCATGGGCATATAGATGACCACTGTATC | + |
|
Preference number: 6 (lower is better) Translates to: SYPCTRQHGIYC*WDHGHIDDHCI Trigger: GATACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CAA 72 bp | CCGGTGTTCCCACAGGCTTTCCCTCATATAAAACTGTaGTGTTTCCATGGAGAAGAGGCCCATAGCAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: PVFPQAFPHIKL*CFHGEEAHSKY Trigger: ATATTTGCTATGGGCCTCTTCTCCATGGAAACACAACAGTTTTATATGAGGGAAAGCCTGTGGGAACACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CCA 72 bp | AATTCTTTGGATGCAAATCCTCCAAATATGAGACTGTaGATTGCTCCTATCCTTGCACACGCCAGCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: NSLDANPPNMRL*IAPILAHASMV Trigger: TACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATATTTGGAGGATTTGCATCCAAAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
||
| CDS CAA 72 bp | GGAACACATTTTCCTGCTTGTCCTGGTGGAGGTGTTTaGGAGTTACCTAATCCAATACATGATGCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GTHFPACPGGGV*ELPNPIHDAVM Trigger: CATCACAGCATCATGTATTGGATTAGGTAACTCCAAAACACCTCCACCAGGACAAGCAGGAAAATGTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 72 bp | GACAGTGTAGACCGTGGAATTTTGCCAGACCTGGTTTaGGGTAACTGTTTGACGAAAACCGCATTTCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: DSVDRGILPDLV*GNCLTKTAFRK Trigger: TTTTCGAAATGCGGTTTTCGTCAAACAGTTACCCAAAACCAGGTCTGGCAAAATTCCACGGTCTACACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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| CDS TCA 72 bp | CCAAATGATGCCGTAACAACCACCTTAGGCTTCGCATaGTCAATGCGCGTACTTAATTCTTTGGATGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PNDAVTTTLGFA*SMRVLNSLDAN Trigger: ATTTGCATCCAAAGAATTAAGTACGCGCATTGATCATGCGAAGCCTAAGGTGGTTGTTACGGCATCATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS GCA 72 bp | TTTGGATGCAAATCCTCCAAATATGAGACTGTGGATTaGTCCTATCCTTGCACACGCCAGCATGGTATATAT | + |
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Preference number: 6 (lower is better) Translates to: FGCKSSKYETVD*SYPCTRQHGIY Trigger: ATATATACCATGCTGGCGTGTGCAAGGATAGGAGCAATCCACAGTCTCATATTTGGAGGATTTGCATCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 72 bp | AACGGGACTGTCATAGATGATAGCAATCTTATCCCCTaGGCCATTTTCAATGTGCCGATCAATAGCATTGTA | + |
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Preference number: 6 (lower is better) Translates to: NGTVIDDSNLIP*AIFNVPINSIV Trigger: TACAATGCTATTGATCGGCACATTGAAAATGGCCAAGGGGATAAGATTGCTATCATCTATGACAGTCCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS CAA 90 bp | GGTGTCTGTAACGGGACTGTCATAGATGATAGCAATCTTATCCCCTaGGCCATTTTCAATGTGCCGATCAATAGCATTGTAACAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: GVCNGTVIDDSNLIP*AIFNVPINSIVTNV Trigger: AACATTTGTTACAATGCTATTGATCGGCACATTGAAAATGGCCAAGGGGATAAGATTGCTATCATCTATGACAGTCCCGTTACAGACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044668.5 ENSMUST00000165067.9 |
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| CDS TCA 72 bp | AACATGTTTCACAATCTCTTCCAAAACTTGTTCTTCTaGTGCATTTACGTCTTTCTTCAACACGCAGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: NMFHNLFQNLFF*CIYVFLQHAEC Trigger: GCACTCTGCGTGTTGAAGAAAGACGTAAATGCATCAGAAGAACAAGTTTTGGAAGAGATTGTGAAACATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165067.9 |
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