Pregenerated sensors for ACSS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027605Ensembl transcript IDs: ENSMUST00000029135.15, ENSMUST00000065973.9, ENSMUST00000103142.12, ENSMUST00000133654.3, ENSMUST00000151781.2
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATTCGCCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTCTaGGACAGCCTCGTGTTCCACAAGTGCCGATTCCACCTCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: AFALHRMRVAHHSCL*DSLVFHKCRFHLCC Trigger: ACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGCGAATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | GTAGAGGCATTCGCCCTTCACAGGATGAGGGTGGCCCACCACAGCTaGCTCTGCGACAGCCTCGTGTTCCACAAGTGCCGATTCCACCTC | + |
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Preference number: 1 (lower is better) Translates to: VEAFALHRMRVAHHS*LCDSLVFHKCRFHL Trigger: GAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGCGAATGCCTCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | GTGGCGCCAGGGAGAGGGGTCAGCATATGGCCACCTGTTTCTGTTTaGCAGAAGGTGTCTACAATGGGGCAGCGCTGGGAACCTACTACC | + |
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Preference number: 1 (lower is better) Translates to: VAPGRGVSIWPPVSV*QKVSTMGQRWEPTT Trigger: GGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCCATATGCTGACCCCTCTCCCTGGCGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | GAGCCGGACTCTAATCCCACGGAGTTAGGCTCTCAAGGCAGGCTCTaGACATTCCCACCCTGCCGGTCTTTCTTGGGACACCCGATAGAA | + |
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Preference number: 1 (lower is better) Translates to: EPDSNPTELGSQGRL*TFPPCRSFLGHPIE Trigger: TTCTATCGGGTGTCCCAAGAAAGACCGGCAGGGTGGGAATGTGCAGAGCCTGCCTTGAGAGCCTAACTCCGTGGGATTAGAGTCCGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| 3UTR GCA 90 bp | GTGGCCCACCACAGCTGCCTCTGCGACAGCCTCGTGTTCCACAAGTaGCGATTCCACCTCTGCTGTACTCAGGAGATGTCCAGACACATT | + |
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Preference number: 1 (lower is better) Translates to: VAHHSCLCDSLVFHK*RFHLCCTQEMSRHI Trigger: AATGTGTCTGGACATCTCCTGAGTACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | GGGTCCTCAGCATCACACCACTCAGGCTCACACTCGTCTCCTGCCTaGTGCATGAGTTCATGCCACCATAAGTCAACCCCTTCGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: GSSASHHSGSHSSPA*CMSSCHHKSTPSFQ Trigger: CTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGCTGAGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | CCACCTGTTTCTGTTTGCCAGAAGGTGTCTACAATGGGGCAGCGCTaGGAACCTACTACCCGGTGGTACCATAGCCAGGCTTCAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: PPVSVCQKVSTMGQR*EPTTRWYHSQASGL Trigger: CAACCCTGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | CAGGCGCTACACCGAAGAATGGGAAAGAAGCAGAACCAGGTTTCATaGGTGTGGCGCCAGGGAGAGGGGTCAGCATATGGCCACCTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: QALHRRMGKKQNQVS*VWRQGEGSAYGHLF Trigger: AAACAGGTGGCCATATGCTGACCCCTCTCCCTGGCGCCACACCCATGAAACCTGGTTCTGCTTCTTTCCCATTCTTCGGTGTAGCGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | TCCTCAGCATCACACCACTCAGGCTCACACTCGTCTCCTGCCTGCTaGATGAGTTCATGCCACCATAAGTCAACCCCTTCGTTCCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SSASHHSGSHSSPAC*MSSCHHKSTPSFQQ Trigger: CTGCTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGCTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | ACCCTTAGGTTTGCCTGTGGAGCCACTGGTGTACAAGATGAAGAGTaGGTCCTCAGCATCACACCACTCAGGCTCACACTCGTCTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: TLRFACGATGVQDEE*VLSITPLRLTLVSC Trigger: GCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGCTGAGGACCCACTCTTCATCTTGTACACCAGTGGCTCCACAGGCAAACCTAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | TCAGCATATGGCCACCTGTTTCTGTTTGCCAGAAGGTGTCTACAATaGGGCAGCGCTGGGAACCTACTACCCGGTGGTACCATAGCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: SAYGHLFLFARRCLQ*GSAGNLLPGGTIAR Trigger: CCTGGCTATGGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCCATATGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | CTGGGTGGTCAGGCAGCGGTGACTGAAGAGATGGTTGATGACAGATaGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: LGGQAAVTEEMVDDR*VSHRRCIPQVMVIL Trigger: CAGAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAACCATCTCTTCAGTCACCGCTGCCTGACCACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | CCCACGGAGTTAGGCTCTCAAGGCAGGCTCTGCACATTCCCACCCTaGCGGTCTTTCTTGGGACACCCGATAGAAGTAGCGATTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: PTELGSQGRLCTFPP*RSFLGHPIEVAIHF Trigger: AAAATGAATCGCTACTTCTATCGGGTGTCCCAAGAAAGACCGGCAGGGTGGGAATGTGCAGAGCCTGCCTTGAGAGCCTAACTCCGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| 3UTR GCA 90 bp | ACCTTCAGCTTCCCCTTCCAGCTCCTCCCCGGACTCATTCAGGATTaGAGGCGCTACACCGAAGAATGGGAAAGAAGCAGAACCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TFSFPFQLLPGLIQD*RRYTEEWERSRTRF Trigger: AAACCTGGTTCTGCTTCTTTCCCATTCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCGGGGAGGAGCTGGAAGGGGAAGCTGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR TCA 90 bp | GATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCTaGGCAATCTTCCGGAGAACTCGCCTCATGATTTTCCCTGAGCGT | + |
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Preference number: 1 (lower is better) Translates to: DGSATVDVSPRSWSF*AIFRRTRLMIFPER Trigger: ACGCTCAGGGAAAATCATGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR TCA 90 bp | CACCCCCAAAGTACGGAGAGGGCAAAAATGTTCAAAGAATGCAGCTaGAAGGCAGGGCTGGTCAATGGGTGGACTCAGGTGAAGTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: HPQSTERAKMFKECS*KAGLVNGWTQVKSD Trigger: GTCTGACTTCACCTGAGTCCACCCATTGACCAGCCCTGCCTTTCAGCTGCATTCTTTGAACATTTTTGCCCTCTCCGTACTTTGGGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| 3UTR GCA 90 bp | CTGTTGGTGCCGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATaGTCCACAAGCGCCCTTCATCTGGGTATGTGGGGATCCCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: LLVPCRTWSPCICPQ*STSALHLGMWGSPQ Trigger: TTGAGGGGATCCCCACATACCCAGATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR GCA 90 bp | TGGCCCATAGGTGACATAGGAATGACCAGTGATCCAGCCGATGTCTaGTGTGCACCAGAACACATCTTCCGGGTGGAAATCAAACACATA | + |
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Preference number: 1 (lower is better) Translates to: WPIGDIGMTSDPADV*CAPEHIFRVEIKHI Trigger: TATGTGTTTGATTTCCACCCGGAAGATGTGTTCTGGTGCACAGCAGACATCGGCTGGATCACTGGTCATTCCTATGTCACCTATGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR TCA 90 bp | TGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACTCTGAAGAGCTaGCTTTGGTTAAGGACATGGTGTTCAAGTCTCTGTTCTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CCPASSQTLIYTLKS*LWLRTWCSSLCSGL Trigger: AAGCCCAGAACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTCTTCAGAGTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| 3UTR GCA 90 bp | GACAGGATCATCTCCAAACTTCATGAGCATCCGGATGGCTGTTGGTaGCGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: DRIISKLHEHPDGCW*RVELGHLVFVHNAP Trigger: TGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAGCCATCCGGATGCTCATGAAGTTTGGAGATGATCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CCA 90 bp | GGTGACAGGATCATCTCCAAACTTCATGAGCATCCGGATGGCTGTTaGTGCCGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATGCT | + |
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Preference number: 1 (lower is better) Translates to: GDRIISKLHEHPDGC*CRVELGHLVFVHNA Trigger: AGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAGCCATCCGGATGCTCATGAAGTTTGGAGATGATCCTGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CAA 90 bp | CGCTGGGAACCTACTACCCGGTGGTACCATAGCCAGGCTTCAGGGTaGATGGGTTCACCTACTGTGCCCAGCACCTGCAGGGATGCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: RWEPTTRWYHSQASG*MGSPTVPSTCRDAR Trigger: CCGGGCATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCATCAACCCTGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTCCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR GCA 90 bp | AAACCGTGTGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTACTGTGCCCAGCACCTaGAGGGATGCCCGGCTATGC | + |
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Preference number: 2 (lower is better) Translates to: KPCVVPIDCAHDPWPGLLTVPST*RDARLC Trigger: GCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGT...AAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACACACGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCGACAGCCTCGTGTTCCACAAGTGCCGATTCCACCTCTGCTGTACTCAGGAACAATGGGGCAGCGCTaGGAACCTACTACCCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LRQPRVPQVPIPPLLYSGTMGQR*EPTTRW Trigger: CCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGT...TCCTGAGTACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CAA 90 bp | TGTGGCGCCAGGGAGAGGGGTCAGCATATGGCCACCTGTTTCTGTTaGCCAGAAGGTGTCTACAATGGGGCAGCGCTGGGAACCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: CGARERGQHMATCFC*PEGVYNGAALGTYY Trigger: GTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCCATATGCTGACCCCTCTCCCTGGCGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR GCA 90 bp | AAACCGTGTGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTTGGGTTCACCTACTGTaGCCAGCACCTGCAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: KPCVVPIDCAHDPWPGLLWVHLL*PAPAGM Trigger: CATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCA...AAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACACACGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | AAACCGTGTGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTCAAGCGCCCTTCATCTaGGTATGTGGGGATCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KPCVVPIDCAHDPWPGLLQAPFI*VCGDPL Trigger: GAGGGGATCCCCACATACCCAGATGAAGGGCGCTTG...AAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACACACGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGTACTCAGGAGATGTCCAGACACATTGAGCATGTCATCAATCCTGCCCGTGCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AVLRRCPDTLSMSSILPVHRLCA*SLARAA Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...CACGGGCAGGATTGATGACATGCTCAATGTGTCTGGACATCTCCTGAGTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CAA 90 bp | AACCTTCAGCTTCCCCTTCCAGCTCCTCCCCGGACTCATTCAGGATaGCAGGCGCTACACCGAAGAATGGGAAAGAAGCAGAACCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NLQLPLPAPPRTHSG*QALHRRMGKKQNQV Trigger: AACCTGGTTCTGCTTCTTTCCCATTCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCGGGGAGGAGCTGGAAGGGGAAGCTGAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCGACAGCCTCGTGTTCCACAAGTGCCGATTCCACCTCTGCTGTACTCAGGACATCTCCAAACTTCATaGGCATCCGGATGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LRQPRVPQVPIPPLLYSGHLQTS*ASGWLL Trigger: CAACAGCCATCCGGATGCTCATGAAGTTTGGAGATG...TCCTGAGTACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CAA 90 bp | GTCAATGGGTGGACTCAGGTGAAGTCAGACAGCCCATCTGACCTTTaGATTCTGGGCAGAGGGGACTGTGACCTTCACCCTGTAGATCGA | + |
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Preference number: 2 (lower is better) Translates to: VNGWTQVKSDSPSDL*ILGRGDCDLHPVDR Trigger: TCGATCTACAGGGTGAAGGTCACAGTCCCCTCTGCCCAGAATCAAAAGGTCAGATGGGCTGTCTGACTTCACCTGAGTCCACCCATTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCCATAGGAATGACCAGTaGTCCAGCCGATGTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: CFRQARCILDVVWCGNGAHRNDQ*SSRCLL Trigger: CAGCAGACATCGGCTGGATCACTGGTCATTCCTATG...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR GCA 90 bp | TTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCCCGGATGGCTGTTGGTaGCGTGTAGAACTTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LMTDGSATVDVSPRSWSFPDGCW*RVELGH Trigger: GTGACCAAGTTCTACACGGCACCAACAGCCATCCGG...GAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCAGAAGGTGTCTACAATaGGGCAGCGCTGGGAACCTA | + |
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Preference number: 2 (lower is better) Translates to: MVDDRWVSHRRCIPQVMVRRCLQ*GSAGNL Trigger: TAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCT...GACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR TCA 90 bp | TTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCCTCCTGCCTGCTGCATaGGTTCATGCCACCATAAGT | + |
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Preference number: 2 (lower is better) Translates to: LMTDGSATVDVSPRSWSFLLPAA*VHATIS Trigger: ACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAG...GAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCCACTGGTGTACAAGATaGAGAGTGGGTCCTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CFRQARCILDVVWCGNGAHWCTR*RVGPQH Trigger: ATGCTGAGGACCCACTCTTCATCTTGTACACCAGTG...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | TTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCCATCCGGATGGCTGTTaGTGCCGTGTAGAACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LMTDGSATVDVSPRSWSFHPDGC*CRVELG Trigger: ACCAAGTTCTACACGGCACCAACAGCCATCCGGATG...GAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCAGAGGGGTCAGCATATaGCCACCTGTTTCTGTTTGC | + |
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Preference number: 2 (lower is better) Translates to: MVDDRWVSHRRCIPQVMVRGVSI*PPVSVC Trigger: GCAAACAGAAACAGGTGGCCATATGCTGACCCCTCT...GACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | AACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGGGATGGGCAGAAATTTaGAGAGCCAAGCACAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: NWCFWRELEELQLLPCFQGWAEI*RAKHRE Trigger: TTCCCTGTGCTTGGCTCTCCAAATTTCTGCCCATCC...CTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAATCTGCTTCTTGAGTTCCTCTGTGAGTGTGGGGCTGAAGGTATGGCCAGAACCTACTACCCGGTaGTACCATAGCCAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLICFLSSSVSVGLKVWPEPTTR*YHSQAS Trigger: TGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTC...TGGCCATACCTTCAGCCCCACACTCACAGAGGAACTCAAGAAGCAGATTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGTGTGGGGCTGAAGGTATGGCCATCACACAAGGTAACAAAGCAGTAGAGCATCAATCCTGCCCGTaGTCCAGTAATAGCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: CECGAEGMAITQGNKAVEHQSCP*SSNSHP Trigger: AGGATGGCTATTACTGGATCACGGGCAGGATTGATG...CTCTACTGCTTTGTTACCTTGTGTGATGGCCATACCTTCAGCCCCACACTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCTGTATTTGTCCACAATaGTCCACAAGCGCCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: CFRQARCILDVVWCGNGACICPQ*STSALH Trigger: ATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACA...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTATCCCCCAGGTCATGGTCATTCTGAGCAATCTTCCGGAGAACTCGCCTCAGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: MYPPGHGHSEQSSGELASGCSLV*QWGQSF Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...TGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| 3UTR CAA 90 bp | CCCTGCTTCCAGTCAGACCCTCATTTACACTCTGAAGAGCTGACTTaGGTTAAGGACATGGTGTTCAAGTCTCTGTTCTGGGCTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PCFQSDPHLHSEELT*VKDMVFKSLFWAWR Trigger: TCTCCAAGCCCAGAACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTCTTCAGAGTGTAAATGAGGGTCTGACTGGAAGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| 3UTR-3UTR TCA 90 bp | CTTCTACCTGGTAGTCTAGGTAACTGTCTCCCTAGTTTCAACCAACTAGTACTGACTAGTACTACTGTGTaGGGGGCAGGATGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: LLPGSLGNCLPSFNQLVLTSTTV*GAGWMG Trigger: GCCCATCCATCCTGCCCCTCACACAGTAGTACTAGT...CAGTACTAGTTGGTTGAAACTAGGGAGACAGTTACCTAGACTACCAGGTAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| 3UTR-3UTR CCA 90 bp | TTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCGTGCCGTGTAGAACTTaGTCACCTTGTATTTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LMTDGSATVDVSPRSWSFVPCRT*SPCICP Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACGGCAC...GAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAATCTTCCGGAGAACTCGCCTCATGATTTTCCCTGAGCGTGTTTTAGGCAAGCCACCTGTTTCTGTTTaGCAGAAGGTGTCTACAATG | + |
|
Preference number: 2 (lower is better) Translates to: AIFRRTRLMIFPERVLGKPPVSV*QKVSTM Trigger: CATTGTAGACACCTTCTGGCAAACAGAAACAGGTGG...CTTGCCTAAAACACGCTCAGGGAAAATCATGAGGCGAGTTCTCCGGAAGATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGCCCATAGGTGACATAGGAATGACCAGTGATCCAGCCGATGTCTGCTGTAACACATCTTCCGGGTaGAAATCAAACACATACTTG | + |
|
Preference number: 2 (lower is better) Translates to: QWPIGDIGMTSDPADVCCNTSSG*KSNTYL Trigger: CAAGTATGTGTTTGATTTCCACCCGGAAGATGTGTT...ACAGCAGACATCGGCTGGATCACTGGTCATTCCTATGTCACCTATGGGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAATGGGTGGACTCAGGTaGAGTCAGACAGCCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: ITLELLTHLTFTATEMRKMGGLR*SQTAHL Trigger: CAGATGGGCTGTCTGACTTCACCTGAGTCCACCCAT...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR-3UTR GCA 90 bp | AGATGTATCCCCCAGGTCATGGTCATTCTGAGCAATCTTCCGGAGAACTCGCCTATCTTTTCTCTAATCTaGTTCTTGAGTTCCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RCIPQVMVILSNLPENSPIFSLI*FLSSSV Trigger: CACAGAGGAACTCAAGAAGCAGATTAGAGAAAAGAT...AGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAAAGAATTACAGCTGCTaGCCTGCTTCCAGTCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSKNYSC*PASSQT Trigger: GGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTT...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGTTCAAAGAATGCAGCTaGAAGGCAGGGCTGGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: IRGKMVNDRQTELKRQMGFKECS*KAGLVN Trigger: ATTGACCAGCCCTGCCTTTCAGCTGCATTCTTTGAA...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTCAAGATAAGAACTGGTaGTTTTGGAGAGAGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KKNKKREFHLQVPLMGRVQDKNW*FWRELE Trigger: TTCCAGCTCTCTCCAAAAGCACCAGTTCTTATCTTG...AACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR CCA 90 bp | GCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGAAGAACTGGTGCTTTTaGAGAGAGCTGGAAGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: AQKEQEKRVSPTSASHGQKNWCF*RELEEL Trigger: TAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTCTT...CTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CAA 90 bp | CATTTATTGAACACTCATTGTGTGTCGGGCTTTATTCTAATTACTTaGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLLNTHCVSGFILIT*ELLTHLTFTATEMR Trigger: CCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAATTAGAATAAAGCCCGACACACAATGAGTGTTCAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR-3UTR CCA 90 bp | GACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACAACAAAGTTTCTTTGGTTAAGGACATaGTGTTCAAGTCTCTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: DNATICKEFRLRTETTKFLWLRT*CSSLCS Trigger: AGAACAGAGACTTGAACACCATGTCCTTAACCAAAG...AAACTTTGTTGTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR GCA 72 bp | TTCGCCCTTCACAGGATGAGGGTGGCCCACCACAGCTaGCTCTGCGACAGCCTCGTGTTCCACAAGTGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: FALHRMRVAHHS*LCDSLVFHKCR Trigger: TCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | CTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTCTaGGACAGCCTCGTGTTCCACAAGTGCCGATTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LHRMRVAHHSCL*DSLVFHKCRFH Trigger: GTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | TCAGGGTTGATGGGTTCACCTACTGTGCCCAGCACCTaGAGGGATGCCCGGCTATGCTTGGTGACAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLMGSPTVPST*RDARLCLVTGS Trigger: TGATCCTGTCACCAAGCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCATCAACCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | CACAGCTGCCTCTGCGACAGCCTCGTGTTCCACAAGTaGCGATTCCACCTCTGCTGTACTCAGGAGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HSCLCDSLVFHK*RFHLCCTQEMS Trigger: GGACATCTCCTGAGTACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | GGCCACCTGTTTCTGTTTGCCAGAAGGTGTCTACAATaGGGCAGCGCTGGGAACCTACTACCCGGTGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: GHLFLFARRCLQ*GSAGNLLPGGT Trigger: GGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | TCTAATCCCACGGAGTTAGGCTCTCAAGGCAGGCTCTaGACATTCCCACCCTGCCGGTCTTTCTTGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SNPTELGSQGRL*TFPPCRSFLGH Trigger: GTGTCCCAAGAAAGACCGGCAGGGTGGGAATGTGCAGAGCCTGCCTTGAGAGCCTAACTCCGTGGGATTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR GCA 72 bp | GATGGGTTCACCTACTGTGCCCAGCACCTGCAGGGATaGCCGGCTATGCTTGGTGACAGGATCATCTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DGFTYCAQHLQG*PAMLGDRIISK Trigger: TTTGGAGATGATCCTGTCACCAAGCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | GGGAGAGGGGTCAGCATATGGCCACCTGTTTCTGTTTaGCAGAAGGTGTCTACAATGGGGCAGCGCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRGVSIWPPVSV*QKVSTMGQRWE Trigger: TTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCCATATGCTGACCCCTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | TCTGTTTGCCAGAAGGTGTCTACAATGGGGCAGCGCTaGGAACCTACTACCCGGTGGTACCATAGCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVCQKVSTMGQR*EPTTRWYHSQA Trigger: AGCCTGGCTATGGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | CACCGAAGAATGGGAAAGAAGCAGAACCAGGTTTCATaGGTGTGGCGCCAGGGAGAGGGGTCAGCATATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HRRMGKKQNQVS*VWRQGEGSAYG Trigger: GCCATATGCTGACCCCTCTCCCTGGCGCCACACCCATGAAACCTGGTTCTGCTTCTTTCCCATTCTTCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | CCGTGTGTGGTTCCCATAGACTGTGCGCATGATCCCTaGCCAGGGCTGCTTGAACACCAGATAACCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCVVPIDCAHDP*PGLLEHQITFS Trigger: GCTGAAGGTTATCTGGTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACACACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR TCA 72 bp | ACCACTCAGGCTCACACTCGTCTCCTGCCTGCTGCATaGGTTCATGCCACCATAAGTCAACCCCTTCGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TTQAHTRLLPAA*VHATISQPLRS Trigger: GGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | TCACACCACTCAGGCTCACACTCGTCTCCTGCCTGCTaGATGAGTTCATGCCACCATAAGTCAACCCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: SHHSGSHSSPAC*MSSCHHKSTPS Trigger: CGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | GCATCACACCACTCAGGCTCACACTCGTCTCCTGCCTaGTGCATGAGTTCATGCCACCATAAGTCAACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASHHSGSHSSPA*CMSSCHHKSTP Trigger: AGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | CAGGCAGCGGTGACTGAAGAGATGGTTGATGACAGATaGGTCAGCCACCGTAGATGTATCCCCCAGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QAAVTEEMVDDR*VSHRRCIPQVM Trigger: CATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAACCATCTCTTCAGTCACCGCTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | TTTGCCTGTGGAGCCACTGGTGTACAAGATGAAGAGTaGGTCCTCAGCATCACACCACTCAGGCTCACACTC | + |
|
Preference number: 3 (lower is better) Translates to: FACGATGVQDEE*VLSITPLRLTL Trigger: GAGTGTGAGCCTGAGTGGTGTGATGCTGAGGACCCACTCTTCATCTTGTACACCAGTGGCTCCACAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGGTCTCTGTTCTGGGCTaGGAGACCTCTCTAGTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: NWCFWRELEELQLLPCFQVSVLG*ETSLVE Trigger: CTCGACTAGAGAGGTCTCCAAGCCCAGAACAGAGAC...CTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGCTTCTTGAGTTCCTCTGTGAGTGTGGGGCTGAAGGTATGGCCATCACAACCACACCCTTAGGTTaGCCTGTGGAGCCACTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NLLLEFLCECGAEGMAITTTPLG*PVEPLV Trigger: CACCAGTGGCTCCACAGGCAAACCTAAGGGTGTGGT...TGTGATGGCCATACCTTCAGCCCCACACTCACAGAGGAACTCAAGAAGCAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATCCCCCAGGTCATGGTCATTCTGAGCAATCTTCCGGAGAACTCGCCTCAAGCCAGGCTTCAGGGTaGATGGGTTCACCTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: MYPPGHGHSEQSSGELASSQASG*MGSPTV Trigger: CACAGTAGGTGAACCCATCAACCCTGAAGCCTGGCT...TGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGATGACAGATGGGTCAGCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCCGGACTCATTCAGGATaGCAGGCGCTACACCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LMTDGSATVDVSPRSWSFRTHSG*QALHRR Trigger: TCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCG...GAATGACCATGACCTGGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | GGTGACATAGGAATGACCAGTGATCCAGCCGATGTCTaGTGTGCACCAGAACACATCTTCCGGGTGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GDIGMTSDPADV*CAPEHIFRVEI Trigger: GATTTCCACCCGGAAGATGTGTTCTGGTGCACAGCAGACATCGGCTGGATCACTGGTCATTCCTATGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | AGCCTAGTGCAGGCCCAAGATAAGAACTGGTGCTTTTaGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SLVQAQDKNWCF*RELEELQLLPC Trigger: GCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTCTTATCTTGGGCCTGCACTAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGGTGTCTACAATGGGGCAGCGCTGGGAACCTACTACCCGGTGGTACCATTTGGTCACCTTGTATTaGTCCACAATGCTCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: QKVSTMGQRWEPTTRWYHLVTLY*STMLHK Trigger: CTTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...ATGGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR TCA 72 bp | TCTCTAGTCGAGGAGCATATCAGTGTGAGGTTGACCTaGCCCCTGTCCCTTCTACCTGGTAGTCTAGGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLVEEHISVRLT*PLSLLPGSLGN Trigger: GTTACCTAGACTACCAGGTAGAAGGGACAGGGGTCAGGTCAACCTCACACTGATATGCTCCTCGACTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR TCA 72 bp | GCCACCGTAGATGTATCCCCCAGGTCATGGTCATTCTaGGCAATCTTCCGGAGAACTCGCCTCATGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ATVDVSPRSWSF*AIFRRTRLMIF Trigger: GAAAATCATGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACATCTACGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | GGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTaGCCTGCTTCCAGTCAGACCCTCATTTACACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAFGESWKNYSC*PASSQTLIYTL Trigger: CAGAGTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR GCA 72 bp | CCGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATaGTCCACAAGCGCCCTTCATCTGGGTATGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PCRTWSPCICPQ*STSALHLGMWG Trigger: TCCCCACATACCCAGATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR CCA 72 bp | AGGCCCAAGATAAGAACTGGTGCTTTTGGAGAGAGCTaGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RPKIRTGAFGES*KNYSCCPASSQ Trigger: CTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTCTTATCTTGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR CAA 90 bp | TCGGCAGCCATCTCCGGTCACATAGTAGCCAGGGAACTTCTTAAAGTAGGTGGTGCCACCTGTTTCTGTTaGCCAGAAGGTGTCTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SAAISGHIVARELLKVGGATCFC*PEGVYN Trigger: ATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGC...ACCACCTACTTTAAGAAGTTCCCTGGCTACTATGTGACCGGAGATGGCTGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | ACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTaGTGCCCTGCTTCCAGTCAGACCCTCATTTACACT | + |
|
Preference number: 3 (lower is better) Translates to: TGAFGESWKNYS*CPASSQTLIYT Trigger: AGTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CCA 72 bp | CCCCTCAAACAAAACACTAGTGGCACCATTAGCCAGTaGCCCATAGGTGACATAGGAATGACCAGTGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLKQNTSGTISQ*PIGDIGMTSDP Trigger: TGGATCACTGGTCATTCCTATGTCACCTATGGGCCACTGGCTAATGGTGCCACTAGTGTTTTGTTTGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR GCA 72 bp | TTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTaGTTCCAGTCAGACCCTCATTTACACTCTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FWRELEELQLLP*FQSDPHLHSEE Trigger: CTCTTCAGAGTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR GCA 72 bp | ATCTCCAAACTTCATGAGCATCCGGATGGCTGTTGGTaGCGTGTAGAACTTGGTCACCTTGTATTTGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ISKLHEHPDGCW*RVELGHLVFVH Trigger: GTGGACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAGCCATCCGGATGCTCATGAAGTTTGGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR TCA 72 bp | TTCAACCAACTAGTACTGTCAACTAGTACTACTGTGTaGGGGGCAGGATGGATGGGCAGAAATTTGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FNQLVLSTSTTV*GAGWMGRNLES Trigger: GCTCTCCAAATTTCTGCCCATCCATCCTGCCCCTCACACAGTAGTACTAGTTGACAGTACTAGTTGGTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CCA 72 bp | ATCATCTCCAAACTTCATGAGCATCCGGATGGCTGTTaGTGCCGTGTAGAACTTGGTCACCTTGTATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IISKLHEHPDGC*CRVELGHLVFV Trigger: GACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAGCCATCCGGATGCTCATGAAGTTTGGAGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| 3UTR TCA 72 bp | GCTTCCAGTCAGACCCTCATTTACACTCTGAAGAGCTaGCTTTGGTTAAGGACATGGTGTTCAAGTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ASSQTLIYTLKS*LWLRTWCSSLC Trigger: ACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTCTTCAGAGTGTAAATGAGGGTCTGACTGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR-3UTR CAA 90 bp | GCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGTCTGAAGAGCTGACTTaGGTTAAGGACATGGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: AQKEQEKRVSPTSASHGQSEELT*VKDMVF Trigger: GAACACCATGTCCTTAACCAAAGTCAGCTCTTCAGA...CTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CCA 72 bp | TATTCTTTCAATGTAGCAGATGATATGAAAGTCCTATaGAGACTGAACCAACTGGTAGACAATGCTACCATC | + |
|
Preference number: 3 (lower is better) Translates to: YSFNVADDMKVL*RLNQLVDNATI Trigger: GATGGTAGCATTGTCTACCAGTTGGTTCAGTCTCCATAGGACTTTCATATCATCTGCTACATTGAAAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CAA 72 bp | CCTACTACCCGGTGGTACCATAGCCAGGCTTCAGGGTaGATGGGTTCACCTACTGTGCCCAGCACCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTRWYHSQASG*MGSPTVPSTCR Trigger: CCTGCAGGTGCTGGGCACAGTAGGTGAACCCATCAACCCTGAAGCCTGGCTATGGTACCACCGGGTAGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACTCGCCCTTCACAGGATaGGGGTGGCCCACCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELEELQLLPCFQSDPHLHSPFTG*GWPTTA Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGCGA...GTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTTCGCCCTTCACAGGATaGGGGTGGCCCACCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVSPFTG*GWPTTA Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGCGA...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR CAA 72 bp | AGTAACCCGACTGAGGTCACTGAGGTCGTGGGAAGATaGGCAGAGCCGGACTCTAATCCCACGGAGTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNPTEVTEVVGR*AEPDSNPTELG Trigger: GCCTAACTCCGTGGGATTAGAGTCCGGCTCTGCCAATCTTCCCACGACCTCAGTGACCTCAGTCGGGTTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR CAA 72 bp | AGGGAGAGGGGTCAGCATATGGCCACCTGTTTCTGTTaGCCAGAAGGTGTCTACAATGGGGCAGCGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RERGQHMATCFC*PEGVYNGAALG Trigger: TCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGCCATATGCTGACCCCTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| CDS-3UTR GCA 90 bp | GAGCTGACTTTGGTTAAGGACATGGTGTTCAAGTCTCTGTTCTGGGCTTGGAGAGTGGCCCACCACAGCTaGCTCTGCGACAGCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELTLVKDMVFKSLFWAWRVAHHS*LCDSLV Trigger: CACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCAC...TCTCCAAGCCCAGAACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACCTGGTGGGGACTGGCTaGGGGAGTCATTCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELEELQLLPCFQSDPHLHLVGTG*GSHSCP Trigger: TGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAG...GTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCACTGTGCCCAGCACCTaGAGGGATGCCCGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFTVPST*RDARLC Trigger: GCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGT...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GAACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCATGGGTTCACCTACTGTaGCCAGCACCTGCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELVLLERAGRITAAALLPWVHLL*PAPAGM Trigger: CATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCA...TGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVTWPLN*WGLAGG Trigger: TCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGT...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTACCCTGGCTCACTTGTaGTCTTTCTGCAGTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVTLAHL*SFCSAV Trigger: CACCGCACTGCAGAAAGAGCACAAGTGAGCCAGGGT...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCTGGCCTCTTAACTGGTaGGGACTGGCTGGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFWPLNW*GLAGGV Trigger: GACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCA...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| 3UTR CAA 72 bp | GGCAGGCTCTGCACATTCCCACCCTGCCGGTCTTTCTaGGGACACCCGATAGAAGTAGCGATTCATTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRLCTFPPCRSF*GHPIEVAIHFD Trigger: ATCAAAATGAATCGCTACTTCTATCGGGTGTCCCAAGAAAGACCGGCAGGGTGGGAATGTGCAGAGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACAATTCATGCCCAGCTCTaGCCGCCCCAGATGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAGRITAAALLPVRPSFTIHAQL*PPQMFD Trigger: GTCAAACATCTGGGGCGGGCAGAGCTGGGCATGAAT...TGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCTGGGTTCACCTACTGTaGCCAGCACCTGCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFWVHLL*PAPAGM Trigger: CATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCA...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGTGTGAGGTTGCTCGTGTTCCACAAGTaGCGATTCCACCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLGLETSLVEEHISVRLLVFHK*RFHLCC Trigger: ACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAG...CAACCTCACACTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGTGTGAGGTTGGTTGTACTGGAGGAATaGGCCAGGGCATGCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLGLETSLVEEHISVRLVVLEE*ARACGF Trigger: AAAACCGCATGCCCTGGCCCATTCCTCCAGTACAAC...CAACCTCACACTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATGTATCCCCCAGGTCATGGTCATTCTGAGCAATCTTCCGGAGAACTCGCCTCAGTTGTACTGGAGGAATaGGCCAGGGCATGCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MYPPGHGHSEQSSGELASVVLEE*ARACGF Trigger: AAAACCGCATGCCCTGGCCCATTCCTCCAGTACAAC...TGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCTGGGGGATACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCCTTGGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFLGGLP*LIALPV Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACCAAG...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTCTGGACATCTGGACATaGCCTCTTAACTGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVLDIWT*PLNWWG Trigger: TCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAG...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GAACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGGCACCATTAGCCAGTaGCCCATAGGTGACATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELVLLERAGRITAAALLPGTISQ*PIGDIG Trigger: TCCTATGTCACCTATGGGCCACTGGCTAATGGTGCC...TGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GAACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGAACCTACTACCCGGTaGTACCATAGCCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELVLLERAGRITAAALLPEPTTR*YHSQAS Trigger: TGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTC...TGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GAACTGGTGCTTTTGGAGAGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAAGAAGGTGTCTACAATaGGGCAGCGCTGGGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: ELVLLERAGRITAAALLPRRCLQ*GSAGNL Trigger: TAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCT...TGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCTCTCCAAAAGCACCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCCCCGCCCCAGATGTTTaGCCACAATGCAGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFPAPDV*PQCSIS Trigger: TGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGG...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACTCCTGCCTGCTGCATaGGTTCATGCCACCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGRITAAALLPVRPSFTLLPAA*VHATIS Trigger: ACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAG...TGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | TGTTCAAGTCTCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGCATAGGAATGACCAGTaGTCCAGCCGATGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSSLCSGLGDLSSRGAYQHRNDQ*SSRCLL Trigger: CAGCAGACATCGGCTGGATCACTGGTCATTCCTATG...CTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGAGACTTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | GAGCTGACTTTGGTTAAGGACATGGTGTTCAAGTCTCTGTTCTGGGCTTGGAGAGTGGTCAGGCAGCGGTaGCTGAAGAGATGGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELTLVKDMVFKSLFWAWRVVRQR*LKRWLM Trigger: CATCAACCATCTCTTCAGTCACCGCTGCCTGACCAC...TCTCCAAGCCCAGAACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR GCA 90 bp | TCACACTCGTCTCCTGCCTGCTGCATGAGTTCATGCCACCATAAGTCAACCCCTGAATGGGCCAGGGCATaGGGTTTTCCAGTAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSPACCMSSCHHKSTPEWARA*GFPVKF Trigger: GAATTTTACTGGAAAACCGCATGCCCTGGCCCATTC...AGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTGGACTCATTCAGGATTaGAGGCGCTACACCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVGLIQD*RRYTEE Trigger: TTCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCC...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTGGCCTCTTAACTGGTaGGGACTGGCTGGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRTRKESFTYKCLSWAGWPLNW*GLAGGV Trigger: GACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCA...CCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACTGGACATCTGGACATaGCCTCTTAACTGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAGRITAAALLPVRPSFTLDIWT*PLNWWG Trigger: TCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAG...TGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTGCAGATCTGGACATCTaGACATGGCCTCTTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVADLDI*TWPLNW Trigger: CCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGC...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTACCTGGTAGTCTAGGTAACTGTCTCCCTAGTTTCAACCAACTAGTACTGACAATGGGGCAGCGCTaGGAACCTACTACCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPGSLGNCLPSFNQLVLTMGQR*EPTTRW Trigger: CCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGT...CAGTACTAGTTGGTTGAAACTAGGGAGACAGTTACCTAGACTACCAGGTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKNKKREFHLQVPLMGRVHRLCA*SLARAA Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...AACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGTGTGAGGTTGGATGTCCAGACACATTaGGCATGTCATCAATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLGLETSLVEEHISVRLDVQTH*ACHQSC Trigger: GCAGGATTGATGACATGCTCAATGTGTCTGGACATC...CAACCTCACACTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTGATGTCCAGACACATTaGGCATGTCATCAATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVDVQTH*ACHQSC Trigger: GCAGGATTGATGACATGCTCAATGTGTCTGGACATC...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACAGGTCATGGTCATTCTaGGCAATCTTCCGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ELEELQLLPCFQSDPHLHRSWSF*AIFRRT Trigger: AGTTCTCCGGAAGATTGCTCAGAATGACCATGACCT...GTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTGGTCACCCTTCTGAATaGCCTGTTTACGGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVGHPSE*PVYGEH Trigger: ATGTTCTCCGTAAACAGGGCATTCAGAAGGGTGACC...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGTCCAAGGCGAGCGCATaGCAGCATAGCCACCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVESKASA*QHSHHK Trigger: CTTGTGGTGGCTATGCTGGCATGCGCTCGCCTTGGA...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | CCAACTGGTAGACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACCCGGATGGCTGTTGGTaGCGTGTAGAACTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTGRQCYHLQGIQTQNRDPDGCW*RVELGH Trigger: GTGACCAAGTTCTACACGGCACCAACAGCCATCCGG...GTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTCTACCAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGGAAGAATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACAGGACTCATTCAGGATTaGAGGCGCTACACCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAGRITAAALLPVRPSFTGLIQD*RRYTEE Trigger: TTCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCC...TGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATTCTTCCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGGTGGCCCACCACAGCTaGCTCTGCGACAGCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGVAHHS*LCDSLV Trigger: CACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCAC...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCCTTGGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EHKKNKKREFHLQVPLMGLGGLP*LIALPV Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACCAAG...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKRTRKESFTYKCLSWAGTWPLN*WGLAGG Trigger: TCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGT...CCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTGTACAAGATGAAGAGTaGGTCCTCAGCATCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVVQDEE*VLSITP Trigger: TGGTGTGATGCTGAGGACCCACTCTTCATCTTGTAC...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTCAAGCGCCCTTCATCTaGGTATGTGGGGATCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKEQEKRVSPTSASHGQGQAPFI*VCGDPL Trigger: GAGGGGATCCCCACATACCCAGATGAAGGGCGCTTG...ACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCCATCCGGATGGCTGTTaGTGCCGTGTAGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFHPDGC*CRVELG Trigger: ACCAAGTTCTACACGGCACCAACAGCCATCCGGATG...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCAGAAGGTGTCTACAATaGGGCAGCGCTGGGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFRRCLQ*GSAGNL Trigger: TAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCT...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGTCTCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGAGAGGGGTCAGCATATaGCCACCTGTTTCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSSLCSGLGDLSSRGAYQRGVSI*PPVSVC Trigger: GCAAACAGAAACAGGTGGCCATATGCTGACCCCTCT...CTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGAGACTTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVILDVV*CGNGAN Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGCCCGCCCCAGATGTTTaGCCACAATGCAGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRTRKESFTYKCLSWAGPAPDV*PQCSIS Trigger: TGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGG...CCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCCACTGGTGTACAAGATaGAGAGTGGGTCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFHWCTR*RVGPQH Trigger: ATGCTGAGGACCCACTCTTCATCTTGTACACCAGTG...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKHRLCA*SLARAA Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCCATCAATCCTGCCCGTaGTCCAGTAATAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFHQSCP*SSNSHP Trigger: AGGATGGCTATTACTGGATCACGGGCAGGATTGATG...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTTCCAAGGCGAGCGCATaGCAGCATAGCCACCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKNKKREFHLQVPLMGRVSKASA*QHSHHK Trigger: CTTGTGGTGGCTATGCTGGCATGCGCTCGCCTTGGA...AACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGCCGGATGGCTGTTGGTaGCGTGTAGAACTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEPDGCW*RVELGH Trigger: GTGACCAAGTTCTACACGGCACCAACAGCCATCCGG...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAACTGTGCCCAGCACCTaGAGGGATGCCCGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSTVPST*RDARLC Trigger: GCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGT...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACTGGTGGGGACTGGCTaGGGGAGTCATTCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKLVGTG*GSHSCP Trigger: TGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGTCTCTGTTCTGGGCTTGGAGACCTCTCTAGTCGAGGAGCATATCAGGTACAAGATGAAGAGTaGGTCCTCAGCATCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSLCSGLGDLSSRGAYQVQDEE*VLSITP Trigger: TGGTGTGATGCTGAGGACCCACTCTTCATCTTGTAC...CTGATATGCTCCTCGACTAGAGAGGTCTCCAAGCCCAGAACAGAGACTTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAACAATGGGGCAGCGCTaGGAACCTACTACCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKTMGQR*EPTTRW Trigger: CCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGT...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCGTGGGGCTGAAGGTATaGCCATCACACAAGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFVGLKV*PSHKVT Trigger: TGTTACCTTGTGTGATGGCCATACCTTCAGCCCCAC...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAGTAGGAAGCTCTCTCTaGAGGAGCAGCAGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKVGSSL*RSSRKG Trigger: GCCCTTCCTGCTGCTCCTTCAGAGAGAGCTTCCTAC...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCGAATGGGCCAGGGCATaGGGTTTTCCAGTAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFEWARA*GFPVKF Trigger: GAATTTTACTGGAAAACCGCATGCCCTGGCCCATTC...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAATGCAGCATCTCACTaGGAAGCCCTTCTCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHKKNKKREFHLQVPLMGNAASH*EALLSA Trigger: TGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATT...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGGGCACCATTAGCCAGTaGCCCATAGGTGACATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEGTISQ*PIGDIG Trigger: TCCTATGTCACCTATGGGCCACTGGCTAATGGTGCC...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACAAGCGCCCTTCATCTaGGTATGTGGGGATCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKQAPFI*VCGDPL Trigger: GAGGGGATCCCCACATACCCAGATGAAGGGCGCTTG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCCATCCGGATGGCTGTTaGTGCCGTGTAGAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EHKKNKKREFHLQVPLMGHPDGC*CRVELG Trigger: ACCAAGTTCTACACGGCACCAACAGCCATCCGGATG...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTACGGAGAACATTGCTaGACTGACACACCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRTRKESFTYKCLSWAGYGEHC*TDTPGP Trigger: TGGTCCAGGTGTGTCAGTTCAGCAATGTTCTCCGTA...CCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGTTATATCTGTCCTCTTaGCTCTCTGAGGCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVELYLSS*LSEAGW Trigger: CCAGCCTGCCTCAGAGAGTCAAGAGGACAGATATAA...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAATTCATGCCCAGCTCTaGCCGCCCCAGATGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKIHAQL*PPQMFD Trigger: GTCAAACATCTGGGGCGGGCAGAGCTGGGCATGAAT...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCTGTATTTGTCCACAATaGTCCACAAGCGCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFCICPQ*STSALH Trigger: ATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACA...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCCGCTACACCGAAGAATaGGAAAGAAGCAGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHKKNKKREFHLQVPLMGRYTEE*ERSRTR Trigger: CCTGGTTCTGCTTCTTTCCCATTCTTCGGTGTAGCG...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATGGAGACTGAACCAACTGGTAGACAATGCTACCATCTGCAAGGAATTCAGACTGTGGGGCTGAAGGTATaGCCATCACACAAGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: METEPTGRQCYHLQGIQTVGLKV*PSHKVT Trigger: TGTTACCTTGTGTGATGGCCATACCTTCAGCCCCAC...AGTCTGAATTCCTTGCAGATGGTAGCATTGTCTACCAGTTGGTTCAGTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGGAATGGGCCAGGGCATaGGGTTTTCCAGTAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRTRKESFTYKCLSWAGEWARA*GFPVKF Trigger: GAATTTTACTGGAAAACCGCATGCCCTGGCCCATTC...CCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAGATCCAGCCGATGTCTaGTGTGCACCAGAACACATC | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKDPADV*CAPEHI Trigger: GATGTGTTCTGGTGCACAGCAGACATCGGCTGGATC...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACTCGTGTTCCACAAGTaGCGATTCCACCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKLVFHK*RFHLCC Trigger: ACAGCAGAGGTGGAATCGGCACTTGTGGAACACGAG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKEQEKRVSPTSASHGQGFRQAR*ILDVVW Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...ACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGTTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEFRQAR*ILDVVW Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAGTTGTACTGGAGGAATaGGCCAGGGCATGCGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKVVLEE*ARACGF Trigger: AAAACCGCATGCCCTGGCCCATTCCTCCAGTACAAC...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAAATGCAGCATCTCACTaGGAAGCCCTTCTCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKNAASH*EALLSA Trigger: TGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATT...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAGAACCTACTACCCGGTaGTACCATAGCCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKEPTTR*YHSQAS Trigger: TGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTC...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATGGAGACTGAACCAACTGGTAGACAATGCTACCATCTGCAAGGAATTCAGACTGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: METEPTGRQCYHLQGIQTGCSLV*QWGQSF Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...AGTCTGAATTCCTTGCAGATGGTAGCATTGTCTACCAGTTGGTTCAGTCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEGCSLV*QWGQSF Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQKEQEKRVSPTSASHGQILDVV*CGNGAN Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...CTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAATACGGAGAACATTGCTaGACTGACACACCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKYGEHC*TDTPGP Trigger: TGGTCCAGGTGTGTCAGTTCAGCAATGTTCTCCGTA...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | GACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACAACAAAGTTTCACTGGTGTACAAGATaGAGAGTGGGTCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNATICKEFRLRTETTKFHWCTR*RVGPQH Trigger: ATGCTGAGGACCCACTCTTCATCTTGTACACCAGTG...AAACTTTGTTGTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGCATAGGAATGACCAGTaGTCCAGCCGATGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGHRNDQ*SSRCLL Trigger: CAGCAGACATCGGCTGGATCACTGGTCATTCCTATG...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACATCTCCAAACTTCATaGGCATCCGGATGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKHLQTS*ASGWLL Trigger: CAACAGCCATCCGGATGCTCATGAAGTTTGGAGATG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAATCTCCCCTGGCTCATTaGCCTCCCAGTAAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKSPLAH*PPSKKQ Trigger: TTGCTTTTTACTGGGAGGGCAATGAGCCAGGGGAGA...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGCCACCTGTTTCTGTTTaGCAGAAGGTGTCTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQKEQEKRVSPTSASHGQPPVSV*QKVSTM Trigger: CATTGTAGACACCTTCTGGCAAACAGAAACAGGTGG...CTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | GACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACAACAAAGTTTGCAGATCTGGACATCTaGACATGGCCTCTTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DNATICKEFRLRTETTKFADLDI*TWPLNW Trigger: CCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGC...AAACTTTGTTGTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCAACACATCTTCCGGGTaGAAATCAAACACATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSEASHLYIFVSVVFNTSSG*KSNTYL Trigger: CAAGTATGTGTTTGATTTCCACCCGGAAGATGTGTT...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTACCTGGTAGTCTAGGTAACTGTCTCCCTAGTTTCAACCAACTAGTACTGGTGCCGTGTAGAACTTaGTCACCTTGTATTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPGSLGNCLPSFNQLVLVPCRT*SPCICP Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACGGCAC...CAGTACTAGTTGGTTGAAACTAGGGAGACAGTTACCTAGACTACCAGGTAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACGCTACACCGAAGAATaGGAAAGAAGCAGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKRYTEE*ERSRTR Trigger: CCTGGTTCTGCTTCTTTCCCATTCTTCGGTGTAGCG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCACATCTCCAAACTTCATaGGCATCCGGATGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSHLQTS*ASGWLL Trigger: CAACAGCCATCCGGATGCTCATGAAGTTTGGAGATG...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCACATCAATCCTGCCCGTaGTCCAGTAATAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSHQSCP*SSNSHP Trigger: AGGATGGCTATTACTGGATCACGGGCAGGATTGATG...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTGCAGATGTTTGTAGTTaGTCCTTTCATCCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKEQEKRVSPTSASHGQGADVCS*SFHPLS Trigger: ACTGAGTGGATGAAAGGAGCAACTACAAACATCTGC...ACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGGCAGATGTTTGTAGTTaGTCCTTTCATCCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEADVCS*SFHPLS Trigger: ACTGAGTGGATGAAAGGAGCAACTACAAACATCTGC...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCATCTCCCCTGGCTCATTaGCCTCCCAGTAAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSSPLAH*PPSKKQ Trigger: TTGCTTTTTACTGGGAGGGCAATGAGCCAGGGGAGA...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | GACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACAACAAAGTTTGGTCACCCTTCTGAATaGCCTGTTTACGGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: DNATICKEFRLRTETTKFGHPSE*PVYGEH Trigger: ATGTTCTCCGTAAACAGGGCATTCAGAAGGGTGACC...AAACTTTGTTGTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAATTCACAGAGAGACTCTaGAGAGAAGCCTGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ITLELLTHLTFTATEMRKFTERL*REACKH Trigger: GTGTTTGCAGGCTTCTCTGCAGAGTCTCTCTGTGAA...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GAGCTGACTTTGGTTAAGGACATGGTGTTCAAGTCTCTGTTCTGGGCTTGGAGAATCTTTTCTCTAATCTaGTTCTTGAGTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELTLVKDMVFKSLFWAWRIFSLI*FLSSSV Trigger: CACAGAGGAACTCAAGAAGCAGATTAGAGAAAAGAT...TCTCCAAGCCCAGAACAGAGACTTGAACACCATGTCCTTAACCAAAGTCAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGAGAGGGGTCAGCATATaGCCACCTGTTTCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGRGVSI*PPVSVC Trigger: GCAAACAGAAACAGGTGGCCATATGCTGACCCCTCT...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GACAATGCTACCATCTGCAAGGAATTCAGACTCAGAACAGAGACAACAAAGTTTATGGTTGATGACAGATaGGTCAGCCACCGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DNATICKEFRLRTETTKFMVDDR*VSHRRC Trigger: ACATCTACGGTGGCTGACCCATCTGTCATCAACCAT...AAACTTTGTTGTCTCTGTTCTGAGTCTGAATTCCTTGCAGATGGTAGCATTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGCTCTCTGAGGCAGGCTaGAAGAGTATTCAGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGLSEAG*KSIQPS Trigger: ACTTGGCTGAATACTCTTCCAGCCTGCCTCAGAGAG...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATGATCCAGCCGATGTCTaGTGTGCACCAGAACACATC | + |
|
Preference number: 4 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYDPADV*CAPEHI Trigger: GATGTGTTCTGGTGCACAGCAGACATCGGCTGGATC...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCATGTATTTGTCCACAATaGTCCACAAGCGCCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSAGLGMLIPLVLGSCICPQ*STSALH Trigger: ATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACA...TGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAACAGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR GCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGCCACCTGTTTCTGTTTaGCAGAAGGTGTCTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGPPVSV*QKVSTM Trigger: CATTGTAGACACCTTCTGGCAAACAGAAACAGGTGG...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGATCTTTTCTCTAATCTaGTTCTTGAGTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ELLTHELGELSKSISSVEIFSLI*FLSSSV Trigger: CACAGAGGAACTCAAGAAGCAGATTAGAGAAAAGAT...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGGTGCCGTGTAGAACTTaGTCACCTTGTATTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRGKMVNDRQTELKRQMGVPCRT*SPCICP Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACGGCAC...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATTTCACAGAGAGACTCTaGAGAGAAGCCTGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYFTERL*REACKH Trigger: GTGTTTGCAGGCTTCTCTGCAGAGTCTCTCTGTGAA...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| 3UTR CAA 72 bp | AACACTCATTGTGTGTCGGGCTTTATTCTAATTACTTaGGAACTGCTGACTCATTTAACCTTCACAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NTHCVSGFILIT*ELLTHLTFTAT Trigger: TGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAATTAGAATAAAGCCCGACACACAATGAGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATAACACATCTTCCGGGTaGAAATCAAACACATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYNTSSG*KSNTYL Trigger: CAAGTATGTGTTTGATTTCCACCCGGAAGATGTGTT...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS CCA 90 bp | CTCTCTCAGCTTACCCTGGACATCTGGACATGGCCTCTTAACTGGTaGGGACTGGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQLTLDIWTWPLNW*GLAGGVIHAQLCPP Trigger: GGGCGGGCAGAGCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS TCA 90 bp | GGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCGCCCCAGATGTTTaGCCACAATGCAGCATCTCACTGGGAAGCCCTTCTCTCGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GWGSHSCPALPAPDV*PQCSISLGSPSLGT Trigger: AGTGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGGCAGAGCTGGGCATGAATGACTCCCCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
||
| CDS TCA 90 bp | CTGAGGCAGGCTGGAAGAGTATTCAGCCAAGTAGGAAGCTCTCTCTaGAGGAGCAGCAGGAAGGGCGAGGTCTGCGGCGACCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRQAGRVFSQVGSSL*RSSRKGEVCGDPGS Trigger: TGAGCCAGGGTCGCCGCAGACCTCGCCCTTCCTGCTGCTCCTTCAGAGAGAGCTTCCTACTTGGCTGAATACTCTTCCAGCCTGCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS CCA 90 bp | TTCGTTCCAGCAGATCTGGACATCTGGACATGGCCTCTTAACTGGTaGGGACTGGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FVPADLDIWTWPLNW*GLAGGVIHAQLCPP Trigger: GGGCGGGCAGAGCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGCTGGAACGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000151781.2 |
||
| CDS CCA 90 bp | CCCTTCGTTCCAGCAGATCTGGACATCTGGACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PFVPADLDIWTWPLN*WGLAGGVIHAQLCP Trigger: CGGGCAGAGCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGCTGGAACGAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000151781.2 |
||
| CDS GCA 90 bp | CACCACTCAGGCTCACACTCGTCTCCTGCCTGCTGCATGAGTTCATaGCACCATAAGTCAACCCCTTCGTTCCAGCAGATCTGGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HHSGSHSSPACCMSS*HHKSTPSFQQIWGR Trigger: CCGACCCCAGATCTGCTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS CCA 90 bp | CAGCTCTGCCCGCCCCAGATGTTTGACCACAATGCAGCATCTCACTaGGAAGCCCTTCTCTCGGCACTTCTCCAAGGACTCATCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLCPPQMFDHNAASH*EALLSALLQGLISQ Trigger: CTGGCTGATGAGTCCTTGGAGAAGTGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGGCAGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
||
| CDS CCA 90 bp | TTTCTCTCTCAGCTTACCCTGGACATCTGGACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLSQLTLDIWTWPLN*WGLAGGVIHAQLCP Trigger: CGGGCAGAGCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS CCA 90 bp | CAGATCTGGGGTCGGATGCACTTGGATTTCTCTCTCAGCTTACCCTaGACATCTGGACATGGCCTCTTAACTGGTGGGGACTGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QIWGRMHLDFSLSLP*TSGHGLLTGGDWLG Trigger: CCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS-3UTR CAA 90 bp | AGTCGAGGAGCATATCAGTGTGAGGTTGACCTGACCCCTGTCCCTTCTACCTGGAGCCAGGCTTCAGGGTaGATGGGTTCACCTACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRGAYQCEVDLTPVPSTWSQASG*MGSPTV Trigger: CACAGTAGGTGAACCCATCAACCCTGAAGCCTGGCT...CCAGGTAGAAGGGACAGGGGTCAGGTCAACCTCACACTGATATGCTCCTCGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS TCA 90 bp | CAGCATCACACCACTCAGGCTCACACTCGTCTCCTGCCTGCTGCATaGGTTCATGCCACCATAAGTCAACCCCTTCGTTCCAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: QHHTTQAHTRLLPAA*VHATISQPLRSSRS Trigger: AGATCTGCTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
||
| CDS GCA 90 bp | CACCACTCAGGCTCACACTCGTCTCCTGCCTGCTGCATGAGTTCATaGCACCATAAGTCAACCCCTTCGTTCCAGCAGATCTGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: HHSGSHSSPACCMSS*HHKSTPSFQQIWTS Trigger: AGATGTCCAGATCTGCTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000151781.2 |
||
| CDS GCA 90 bp | GCCACCATAAGTCAACCCCTTCGTTCCAGCAGATCTGGGGTCGGATaGACTTGGATTTCTCTCTCAGCTTACCCTGGACATCTGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: ATISQPLRSSRSGVG*TWISLSAYPGHLDM Trigger: CATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTGCTGGAACGAAGGGGTTGACTTATGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS CCA 90 bp | AAACTTAGGTTTGCCTGTGGAGCCACTGGTGTACAAGATGAAGAGTaGGTCCTCAGCATCACACCACTCAGGCTCACACTCGTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLRFACGATGVQDEE*VLSITPLRLTLVSC Trigger: GCAGGAGACGAGTGTGAGCCTGAGTGGTGTGATGCTGAGGACCCACTCTTCATCTTGTACACCAGTGGCTCCACAGGCAAACCTAAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151781.2 |
||
| CDS CCA 90 bp | GGTCACCTTGTATTTGTCCACAATGCTCCACAAGCGCCCTTCATCTaGGTATGTGGGGATCCCCTCAAACTTAGGTTTGCCTGTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLVFVHNAPQAPFI*VCGDPLKLRFACGA Trigger: GGCTCCACAGGCAAACCTAAGTTTGAGGGGATCCCCACATACCCAGATGAAGGGCGCTTGTGGAGCATTGTGGACAAATACAAGGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151781.2 |
||
| CDS-3UTR CAA 90 bp | AATTACAGCTGCTGCCCTGCTTCCAGTCAGACCCTCATTTACACTCTGAAGAGCGCATCCGGATGGCTGTaGGTGCCGTGTAGAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NYSCCPASSQTLIYTLKSASGWL*VPCRTW Trigger: CCAAGTTCTACACGGCACCAACAGCCATCCGGATGC...GCTCTTCAGAGTGTAAATGAGGGTCTGACTGGAAGCAGGGCAGCAGCTGTAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS CCA 90 bp | ATAAGTCAACCCCTTCGTTCCAGCAGATCTGGGGTCGGATGCACTTaGATTTCTCTCTCAGCTTACCCTGGACATCTGGACATGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISQPLRSSRSGVGCT*ISLSAYPGHLDMAS Trigger: AGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTGCTGGAACGAAGGGGTTGACTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
||
| CDS GCA 90 bp | GAAGCCTGCAAACACAATGGAGTGCAAAGCTCCAAGGCGAGCGCATaGCAGCATAGCCACCACAAGTTCCAAGATCATAGGCATGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EACKHNGVQSSKASA*QHSHHKFQDHRHVD Trigger: ATCTACATGCCTATGATCTTGGAACTTGTGGTGGCTATGCTGGCATGCGCTCGCCTTGGAGCTTTGCACTCCATTGTGTTTGCAGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
||
| CDS-3UTR CAA 90 bp | CCGCCGTTTCCCTCGGAGGCAAGCCATCTTTACATTTTTGTTAGTGTTGTCTTCTCACGGTATGTGATCTaGGTGGTCTCCCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PPFPSEASHLYIFVSVVFSRYVI*VVSPGS Trigger: TGAGCCAGGGGAGACCACCAAGATCACATACCGTGA...GAAGACAACACTAACAAAAATGTAAAGATGGCTTGCCTCCGAGGGAAACGGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CAA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCACCACACCCTTAGGTTaGCCTGTGGAGCCACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EHKKNKKREFHLQVPLMGTTPLG*PVEPLV Trigger: CACCAGTGGCTCCACAGGCAAACCTAAGGGTGTGGT...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCAAAAGCATATCCAGTGTAGAGTAAGACTCCTTCCCCCAGCCGCCGTTTTGGTCACCTTGTATTaGTCCACAATGCTCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVQKHIQCRVRLLPPAAVLVTLY*STMLHK Trigger: CTTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...AACGGCGGCTGGGGGAAGGAGTCTTACTCTACACTGGATATGCTTTTGGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CAA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGAGCCAGGCTTCAGGGTaGATGGGTTCACCTACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ELLTHELGELSKSISSVESQASG*MGSPTV Trigger: CACAGTAGGTGAACCCATCAACCCTGAAGCCTGGCT...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTTCACGGTATGTGATCTaGGTGGTCTCCCCTGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KKNKKREFHLQVPLMGRVSRYVI*VVSPGS Trigger: TGAGCCAGGGGAGACCACCAAGATCACATACCGTGA...AACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
||
| CDS-3UTR CAA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAAGCATCCGGATGGCTGTaGGTGCCGTGTAGAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ITLELLTHLTFTATEMRKASGWL*VPCRTW Trigger: CCAAGTTCTACACGGCACCAACAGCCATCCGGATGC...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGGGTTCGGACTCATTCAGGATaGCAGGCGCTACACCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKNKKREFHLQVPLMGRVRTHSG*QALHRR Trigger: TCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCG...AACCCTGCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CAA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGACCACACCCTTAGGTTaGCCTGTGGAGCCACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IRGKMVNDRQTELKRQMGTTPLG*PVEPLV Trigger: CACCAGTGGCTCCACAGGCAAACCTAAGGGTGTGGT...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS-3UTR CAA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAACGGACTCATTCAGGATaGCAGGCGCTACACCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: ITLELLTHLTFTATEMRKRTHSG*QALHRR Trigger: TCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCG...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS-3UTR CAA 90 bp | ATGTCTGCTGTGCACCAGAACACATCTTCCGGGTGGAAATCAAACACATACTTGTTAGTCACATCAAAGTaGTACTGGAGGAATGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: MSAVHQNTSSGWKSNTYLLVTSK*YWRNGP Trigger: TGGCCCATTCCTCCAGTACAACTTTGATGTGACTAA...CAAGTATGTGTTTGATTTCCACCCGGAAGATGTGTTCTGGTGCACAGCAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133654.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGACTGAACCAACTGGTAGACAATGCTACCATCTGCAAGGAATTCAGACTTTAGTCACATCAAAGTaGTACTGGAGGAATGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: METEPTGRQCYHLQGIQTLVTSK*YWRNGP Trigger: TGGCCCATTCCTCCAGTACAACTTTGATGTGACTAA...AGTCTGAATTCCTTGCAGATGGTAGCATTGTCTACCAGTTGGTTCAGTCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CAA 90 bp | GAGCACAAAAAGAACAAGAAAAGAGAGTTTCACCTACAAGTGCCTCTCATGGGCAGATGTCCAGACACATaGAGCATGTCATCAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: EHKKNKKREFHLQVPLMGRCPDT*SMSSIL Trigger: CAGGATTGATGACATGCTCAATGTGTCTGGACATCT...GCCCATGAGAGGCACTTGTAGGTGAAACTCTCTTTTCTTGTTCTTTTTGTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CAA 90 bp | GAACTGCTAACACATGAGCTAGGTGAACTGTCCAAAAGCATATCCAGTGTAGAGAGATGTCCAGACACATaGAGCATGTCATCAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: ELLTHELGELSKSISSVERCPDT*SMSSIL Trigger: CAGGATTGATGACATGCTCAATGTGTCTGGACATCT...CTCTACACTGGATATGCTTTTGGACAGTTCACCTAGCTCATGTGTTAGCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS GCA 90 bp | CTCATGGACATTTCGATCCAGCACGTTGTAGCAGATGTTTGTAGTTaGTCCTTTCATCCACTCAGTGAATATTTTCCCTTTAGTCACATC | + |
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Preference number: 5 (lower is better) Translates to: LMDISIQHVVADVCS*SFHPLSEYFPFSHI Trigger: GATGTGACTAAAGGGAAAATATTCACTGAGTGGATGAAAGGAGCAACTACAAACATCTGCTACAACGTGCTGGATCGAAATGTCCATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000133654.3 |
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| CDS-3UTR CAA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGGCCACCTGTTTCTGTTaGCCAGAAGGTGTCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: IRGKMVNDRQTELKRQMGATCFC*PEGVYN Trigger: ATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGC...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS-3UTR CAA 90 bp | ATTACTTTGGAACTGCTGACTCATTTAACCTTCACAGCCACAGAGATGAGGAAATCTCTAATCTGCTTCTaGAGTTCCTCTGTGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: ITLELLTHLTFTATEMRKSLICF*SSSVSV Trigger: CACACTCACAGAGGAACTCAAGAAGCAGATTAGAGA...TTTCCTCATCTCTGTGGCTGTGAAGGTTAAATGAGTCAGCAGTTCCAAAGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS-3UTR CAA 90 bp | ATCAGAGGTAAAATGGTGAATGATAGACAGACTGAGCTAAAAAGACAAATGGGGTTAGTCACATCAAAGTaGTACTGGAGGAATGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: IRGKMVNDRQTELKRQMGLVTSK*YWRNGP Trigger: TGGCCCATTCCTCCAGTACAACTTTGATGTGACTAA...CCCCATTTGTCTTTTTAGCTCAGTCTGTCTATCATTCACCATTTTACCTCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS-3UTR CAA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATGCCACCTGTTTCTGTTaGCCAGAAGGTGTCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYATCFC*PEGVYN Trigger: ATTGTAGACACCTTCTGGCAAACAGAAACAGGTGGC...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CAA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATTTGGTCACCTTGTATTaGTCCACAATGCTCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYLVTLY*STMLHK Trigger: CTTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS-3UTR CAA 90 bp | GTTCATAGTGCAGGATTAGGAATGTTAATTCCCTTGGTTTTAGGATCAGTATATTCTCTAATCTGCTTCTaGAGTTCCTCTGTGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: VHSAGLGMLIPLVLGSVYSLICF*SSSVSV Trigger: CACACTCACAGAGGAACTCAAGAAGCAGATTAGAGA...ATATACTGATCCTAAAACCAAGGGAATTAACATTCCTAATCCTGCACTATGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029135.15 |
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| CDS CAA 72 bp | GCAGGAAGGGCGAGGTCTGCGGCGACCCTGGCTCACTaGTGCTCTTTCTGCAGTGCGGTGGTGCTACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGRARSAATLAH*CSFCSAVVLLS Trigger: GCTCAGTAGCACCACCGCACTGCAGAAAGAGCACAAGTGAGCCAGGGTCGCCGCAGACCTCGCCCTTCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065973.9 |
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| CDS CCA 72 bp | TGGACATCTGGACATGGCCTCTTAACTGGTGGGGACTaGCTGGGGGAGTCATTCATGCCCAGCTCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: WTSGHGLLTGGD*LGESFMPSSAR Trigger: GCGGGCAGAGCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
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| CDS CCA 72 bp | CCAGCAGATCTGGACATCTGGACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGAGTCATTCATGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PADLDIWTWPLN*WGLAGGVIHAQ Trigger: CTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000151781.2 |
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| CDS CCA 72 bp | CAGCTTACCCTGGACATCTGGACATGGCCTCTTAACTaGTGGGGACTGGCTGGGGGAGTCATTCATGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QLTLDIWTWPLN*WGLAGGVIHAQ Trigger: CTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS CCA 72 bp | CCGCCCCAGATGTTTGACCACAATGCAGCATCTCACTaGGAAGCCCTTCTCTCGGCACTTCTCCAAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: PPQMFDHNAASH*EALLSALLQGL Trigger: GAGTCCTTGGAGAAGTGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATTGTGGTCAAACATCTGGGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
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| CDS CCA 72 bp | GGATTTCTCTCTCAGCTTACCCTGGACATCTGGACATaGCCTCTTAACTGGTGGGGACTGGCTGGGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GFLSQLTLDIWT*PLNWWGLAGGV Trigger: GACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS TCA 72 bp | AGTCATTCATGCCCAGCTCTGCCCGCCCCAGATGTTTaGCCACAATGCAGCATCTCACTGGGAAGCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SHSCPALPAPDV*PQCSISLGSPS Trigger: AGAAGGGCTTCCCAGTGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGGCAGAGCTGGGCATGAATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
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| CDS GCA 72 bp | GGCTCACACTCGTCTCCTGCCTGCTGCATGAGTTCATaGCACCATAAGTCAACCCCTTCGTTCCAGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: GSHSSPACCMSS*HHKSTPSFQQI Trigger: GATCTGCTGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
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| CDS CCA 72 bp | CCCCTTCGTTCCAGCAGATCTGGGGTCGGATGCACTTaGATTTCTCTCTCAGCTTACCCTGGACATCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PLRSSRSGVGCT*ISLSAYPGHLD Trigger: GTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTGCTGGAACGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS CCA 72 bp | GGTCGGATGCACTTGGATTTCTCTCTCAGCTTACCCTaGACATCTGGACATGGCCTCTTAACTGGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GRMHLDFSLSLP*TSGHGLLTGGD Trigger: GTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS CAA 72 bp | ACCCCTTCGTTCCAGCAGATCTGGGGTCGGATGCACTaGGATTTCTCTCTCAGCTTACCCTGGACATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TPSFQQIWGRMH*DFSLSLPWTSG Trigger: TCCAGATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTGCTGGAACGAAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS CAA 90 bp | AAGCGCCCTTCATCTGGGTATGTGGGGATCCCCTCAAACTTAGGTTaGCCTGTGGAGCCACTGGTGTACAAGATGAAGAGTGGGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KRPSSGYVGIPSNLG*PVEPLVYKMKSGSS Trigger: TGAGGACCCACTCTTCATCTTGTACACCAGTGGCTCCACAGGCAAACCTAAGTTTGAGGGGATCCCCACATACCCAGATGAAGGGCGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151781.2 |
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| CDS GCA 72 bp | AGTCAACCCCTTCGTTCCAGCAGATCTGGGGTCGGATaGACTTGGATTTCTCTCTCAGCTTACCCTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: SQPLRSSRSGVG*TWISLSAYPGH Trigger: ATGTCCAGGGTAAGCTGAGAGAGAAATCCAAGTGCATCCGACCCCAGATCTGCTGGAACGAAGGGGTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103142.12 |
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| CDS GCA 72 bp | AAACACAATGGAGTGCAAAGCTCCAAGGCGAGCGCATaGCAGCATAGCCACCACAAGTTCCAAGATCATAGG | + |
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Preference number: 6 (lower is better) Translates to: KHNGVQSSKASA*QHSHHKFQDHR Trigger: CCTATGATCTTGGAACTTGTGGTGGCTATGCTGGCATGCGCTCGCCTTGGAGCTTTGCACTCCATTGTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000151781.2 |
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| CDS CCA 72 bp | GTATTTGTCCACAATGCTCCACAAGCGCCCTTCATCTaGGTATGTGGGGATCCCCTCAAACTTAGGTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VFVHNAPQAPFI*VCGDPLKLRFA Trigger: GGCAAACCTAAGTTTGAGGGGATCCCCACATACCCAGATGAAGGGCGCTTGTGGAGCATTGTGGACAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151781.2 |
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| CDS GCA 72 bp | ATTTCGATCCAGCACGTTGTAGCAGATGTTTGTAGTTaGTCCTTTCATCCACTCAGTGAATATTTTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ISIQHVVADVCS*SFHPLSEYFPF Trigger: AAAGGGAAAATATTCACTGAGTGGATGAAAGGAGCAACTACAAACATCTGCTACAACGTGCTGGATCGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029135.15 ENSMUST00000065973.9 ENSMUST00000103142.12 ENSMUST00000133654.3 |
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