Pregenerated sensors for ACSS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027452Ensembl transcript IDs: ENSMUST00000028944.4
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACCTTGCTCAGGAGCACCAAGTGTCATCGTCATTGGACCACAGTaGGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGGCAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RPCSGAPSVIVIGPQ*VLAAPTTKERTGRV Trigger: GACTCTGCCTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTTGGTGCTCCTGAGCAAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR GCA 90 bp | AGGAGCACCAAGTGTCATCGTCATTGGACCACAGTGAGTTCTTGCTaGCCCAACCACAAAAGAAAGGACAGGCAGAGTCTTCAGGATCTC | + |
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Preference number: 1 (lower is better) Translates to: RSTKCHRHWTTVSSC*PNHKRKDRQSLQDL Trigger: GAGATCCTGAAGACTCTGCCTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTTGGTGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CCA 90 bp | CCACAAAAGAAAGGACAGGCAGAGTCTTCAGGATCTCAGTTCAGATaGGACCAGAGGCTTAGTAAAGACACCCGAGTTTTCACTGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: PQKKGQAESSGSQFR*DQRLSKDTRVFTGY Trigger: GTAGCCAGTGAAAACTCGGGTGTCTTTACTAAGCCTCTGGTCCCATCTGAACTGAGATCCTGAAGACTCTGCCTGTCCTTTCTTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAACCAGATGTATaGCAAAGGCCTTCCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RREILPTVCVCVCVCVCVWKPDV*QRPSPS Trigger: GCTGGGGGAAGGCCTTTGTCATACATCTGGTTTCCA...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR GCA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACGGTAGAGCGCTTGCTTaGCTAGTGTGCAGGAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NMISYYEAPWGKKLLPDHGRALA*LVCRRP Trigger: GGGCCTCCTGCACACTAGGCAAGCAAGCGCTCTACC...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGGTTAGAGGTGTGGTGTaGAGCTCAGAGGTAGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLVRGVV*SSEVER Trigger: GCGCTCTACCTCTGAGCTGCACACCACACCTCTAAC...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGAGCAGGAGAGTTATGTaGCAGAGGCACAAACATGTC | + |
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Preference number: 2 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLSRRVM*QRHKHV Trigger: GACATGTTTGTGCCTCTGGCACATAACTCTCCTGCT...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCCAATTATGACTTaGTTCTGGAAACCAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: RREILPTVCVCVCVCVCVVPIMT*FWKPDV Trigger: TACATCTGGTTTCCAGAATCAAGTCATAATTGGCAC...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCAGGAGTTGGACATGGTaGCTTGGATTAGCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GKETPSRSQLRETNPNDFRSWTW*LGLAGE Trigger: CTCTCCTGCTAATCCAAGTCACCATGTCCAACTCCT...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCGCAGGAGGCCCTGAGTaGAATTCCTACCATACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GKETPSRSQLRETNPNDFAGGPE*NSYHTK Trigger: TTTTGTATGGTAGGAATTGCACTCAGGGCCTCCTGC...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CAA 90 bp | ATTTGTGTTTTGTATCTAAACACATCTGGAGAAAGCATGACAGTTTaGGAGCTAAGACCTCTGGTCACCCTGTGCTGGCTTAGTGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: ICVLYLNTSGESMTV*ELRPLVTLCWLSAN Trigger: ATTGGCACTAAGCCAGCACAGGGTGACCAGAGGTCTTAGCTCCAAAACTGTCATGCTTTCTCCAGATGTGTTTAGATACAAAACACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR GCA 90 bp | GCCACGTCCATCACATGGCTCTTCACTGCTGATTGTAACAAAGGACTATTAAGACATGACTTCACTATTTaGATCACTCACCAATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ATSITWLFTADCNKGLLRHDFTI*ITHQCP Trigger: TGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG...TCTTAATAGTCCTTTGTTACAATCAGCAGTGAAGAGCCATGTGATGGACGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGGTATCTAAACACATCTaGAGAAAGCATGACAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLVSKHI*RKHDSF Trigger: AAAACTGTCATGCTTTCTCCAGATGTGTTTAGATAC...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CCA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACCAAACATGTCTGGTTTaGACTTTAAGCACATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: NMISYYEAPWGKKLLPDHQTCLV*TLSTLN Trigger: ATTCAATGTGCTTAAAGTCCAAACCAGACATGTTTG...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTAGAAACAAGCCACTTTaGAAGTTGCTTCCCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VDQTEQASFAPRGPAHRARNKPL*KLLPLR Trigger: CCTCAGGGGAAGCAACTTCAAAAGTGGCTTGTTTCT...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGCCACTTTTGAAGTaGCTTCCCCTGAGGACGTCC | + |
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Preference number: 3 (lower is better) Translates to: RREILPTVCVCVCVCVCVKPLLK*LPLRTS Trigger: GGACGTCCTCAGGGGAAGCAACTTCAAAAGTGGCTT...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACGGGTCCTGTGCAGCCTaGTCTGAACAACACAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: NMISYYEAPWGKKLLPDHGSCAA*SEQHRG Trigger: GCCTCTGTGTTGTTCAGACAAGGCTGCACAGGACCC...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR TCA 72 bp | TCAGGAGCACCAAGTGTCATCGTCATTGGACCACAGTaGGTTCTTGCTGCCCCAACCACAAAAGAAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: SGAPSVIVIGPQ*VLAAPTTKERT Trigger: TGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTTGGTGCTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR GCA 72 bp | ACCAAGTGTCATCGTCATTGGACCACAGTGAGTTCTTaGTGCCCCAACCACAAAAGAAAGGACAGGCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: TKCHRHWTTVSS*CPNHKRKDRQS Trigger: ACTCTGCCTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR GCA 72 bp | AAGTGTCATCGTCATTGGACCACAGTGAGTTCTTGCTaGCCCAACCACAAAAGAAAGGACAGGCAGAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: KCHRHWTTVSSC*PNHKRKDRQSL Trigger: AAGACTCTGCCTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR TCA 72 bp | GGCTACCATGAACAACCTCACACGTTTGAAGCAATATaGTCTCCTACTATGAGGCACCTTGGGGAAAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: GYHEQPHTFEAI*SPTMRHLGERN Trigger: GTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATTGCTTCAAACGTGTGAGGTTGTTCATGGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR TCA 72 bp | AACCTCACACGTTTGAAGCAATATGATCTCCTACTATaGGGCACCTTGGGGAAAGAAACTCCTTCCAGATCA | + |
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Preference number: 3 (lower is better) Translates to: NLTRLKQYDLLL*GTLGKETPSRS Trigger: TGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATTGCTTCAAACGTGTGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | AAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACAAGTAGAAAGCATGACAGTTTaGGAGCTAAGACCTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: KLLPDHSLEKRTQMISQVESMTV*ELRPLV Trigger: GACCAGAGGTCTTAGCTCCAAAACTGTCATGCTTTC...TACTTGTGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCAGTGCCAATTATGACTaGATTCTGGAAACCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: HDFTICITHQCPENLRHISANYD*ILETRC Trigger: ACATCTGGTTTCCAGAATCAAGTCATAATTGGCACT...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR-3UTR CAA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACACAAACATGTCTGGTTaGGACTTTAAGCACATTGAA | + |
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Preference number: 3 (lower is better) Translates to: NMISYYEAPWGKKLLPDHTNMSG*DFKHIE Trigger: TTCAATGTGCTTAAAGTCCAAACCAGACATGTTTGT...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CCA 72 bp | GAGAGTTATGTGCCAGAGGCACAAACATGTCTGGTTTaGACTTTAAGCACATTGAATGGTAATAAAATTTTT | + |
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Preference number: 3 (lower is better) Translates to: ESYVPEAQTCLV*TLSTLNGNKIF Trigger: AAAAATTTTATTACCATTCAATGTGCTTAAAGTCCAAACCAGACATGTTTGTGCCTCTGGCACATAACTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGGGCCGGCTCCTGGGCTaGCTGAGCGCTCAACGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLGRLLG*LSAQRG Trigger: CCCGCGTTGAGCGCTCAGGCAGCCCAGGAGCCGGCC...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | AAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCCGGGAGGATCTCTaGCCCATCTTCCGAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KGDSSHGVCVCVCVCVCVAREDL*PIFRGP Trigger: CGGCCCTCGGAAGATGGGGCAGAGATCCTCCCGGGC...CACACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTACCATAGATGGTCCTTaGCATGCCTGGCCAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VDQTEQASFAPRGPAHRATIDGP*HAWPSL Trigger: CAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGT...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTTTCACCACCAGGATCTaGTCAGGCACAGCATACTTG | + |
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Preference number: 4 (lower is better) Translates to: VDQTEQASFAPRGPAHRAFTTRI*SGTAYL Trigger: CAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAA...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGGGGTACGAGCCTGGTTaGGCTGCTGCAGGAACGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQGYEPG*AAAGTQ Trigger: CTGCGTTCCTGCAGCAGCGCAACCAGGCTCGTACCC...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | AAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCACCAGGACATGCTaGACTGTTGGGCAGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KGDSSHGVCVCVCVCVCVATRTC*TVGQLF Trigger: GAAGAGCTGCCCAACAGTCCAGCATGTCCTGGTGGC...CACACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | AAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGGTCACCATAGATaGTCCTTGCCATGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGDSSHGVCVCVCVCVCVGGHHR*SLPCLA Trigger: GGCCAGGCATGGCAAGGACCATCTATGGTGACCACC...CACACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCGATCTTGCCCGTCCTaGAGTCACAGTCCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQRSCPS*SHSPRQ Trigger: CTGTCTGGGACTGTGACTTCAGGACGGGCAAGATCG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCATCCATGCGCCCCGTaGTCTGGTAATAGCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQHPCAP*SGNSHP Trigger: AGGGTGGCTATTACCAGATCACGGGGCGCATGGATG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCAGGCACAGCATACTTaGCGATCTTGGTGGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQQAQHT*RSWWPP Trigger: CGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CAA 72 bp | AGAGACCTTGCTCAGGAGCACCAAGTGTCATCGTCATaGGACCACAGTGAGTTCTTGCTGCCCCAACCACAA | + |
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Preference number: 4 (lower is better) Translates to: RDLAQEHQVSSS*DHSEFLLPQPQ Trigger: TTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGATGACACTTGGTGCTCCTGAGCAAGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACGGCCTCATGGCCATaGCCGGGAGGATCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKETPSRSQLRETNPNDFTASWP*PGGSLP Trigger: GGGCAGAGATCCTCCCGGGCATGGCCATGAGGCCGT...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGTGCTGCCACAGCCAGTaGGGACACAGGCATGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQCCHSQ*GHRHVD Trigger: ATCTACATGCCTGTGTCCCCACTGGCTGTGGCAGCA...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGTGTCCCGGTGCTCCCTaGGGTGTAGAGCATAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLCPGAP*GVEHKE Trigger: CTCTTTATGCTCTACACCTCAGGGAGCACCGGGACA...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCATAGCTGTGTCCTGTaGTCCAACCGATGTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQHSCVL*SNRCQP Trigger: TGGCTGACATCGGTTGGATCACAGGACACAGCTATG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCTTCTCATCCATaGGTACAGGAACGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RREILPTVCVCVCVCVCVCPSHP*VQERCQ Trigger: TTGGCATCGTTCCTGTACTCATGGATGAGAAGGGCA...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCGGCACAGGCCAGCATTaGTGCCACAGCCAGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GKETPSRSQLRETNPNDFGTGQH*CHSQWG Trigger: TCCCCACTGGCTGTGGCAGCAATGCTGGCCTGTGCC...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCCTCCAGTTTCCGTTTaGCACCAAGTGTCCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQPPVSV*HQVSTS Trigger: ACTGGTGGACACTTGGTGGCAAACGGAAACTGGAGG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGACAGACACATTCAACTaGCCTCCCAGGAACCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLTDTFN*PPRNQP Trigger: CGGCTGGTTCCTGGGAGGCCAGTTGAATGTGTCTGT...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GCCACGTCCATCACATGGCTCTTCACTGCTGATTGTAACAAAGGACTATTAAGATGGCCAGGCGGCATGTaGTCTCCAGAAGCTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ATSITWLFTADCNKGLLRWPGGM*SPEAPC Trigger: ACAGGGAGCTTCTGGAGACCACATGCCGCCTGGCCA...TCTTAATAGTCCTTTGTTACAATCAGCAGTGAAGAGCCATGTGATGGACGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGGGTCCTTGCCATGCCTaGCCAAGCTTGGGAAATACA | + |
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Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQGPCHA*PSLGNT Trigger: TGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACC...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCTTGGTGTCCGTCCTGTaGGCCACCAGGACATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDFTICITHQCPENLRHILVSVL*ATRTCW Trigger: CCAGCATGTCCTGGTGGCTCACAGGACGGACACCAA...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACAGGGCCGTGGTGCAATaGAGATGCCTCCAGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: NMISYYEAPWGKKLLPDHRAVVQ*RCLQFP Trigger: CGGAAACTGGAGGCATCTGCATTGCACCACGGCCCT...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | AAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACAAGTACCACCCTCTGTCCGGTaGGCTCCGTCTCCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPDHSLEKRTQMISQVPPSVR*APSPVK Trigger: CTTCACTGGAGACGGAGCTCACCGGACAGAGGGTGG...TACTTGTGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACCTTGGGTGTCCCGGTaGTCCCTGAGGTGTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISPWVSR*SLRCRA Trigger: TGCTCTACACCTCAGGGAGCACCGGGACACCCAAGG...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGCCCAGATCAAAGCTATaGTCTCAGGAGACTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQPRSKL*SQETSA Trigger: TGCAGAAGTCTCCTGAGACCATAGCTTTGATCTGGG...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGGCAAATACCACTGTGTaGATAGCTCCAATCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQANTTV*IAPILA Trigger: TGCCAGGATTGGAGCTATCCACACAGTGGTATTTGC...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCTCCCCATGGGAACCTTaGTGTCCGTCCTGTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HDFTICITHQCPENLRHISPWEP*CPSCEP Trigger: TGGCTCACAGGACGGACACCAAGGTTCCCATGGGGA...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CAA 72 bp | TTCACAAGTAAAGGAGAGGACATTCACTCCGTCTTCTaGGGAGTTAGAGGTGTGGTGTGCAGCTCAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FTSKGEDIHSVF*GVRGVVCSSEV Trigger: TACCTCTGAGCTGCACACCACACCTCTAACTCCCAAGAAGACGGAGTGAATGTCCTCTCCTTTACTTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACGCTGATCCAGGCAGTTaGCAGACACATTCAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NMISYYEAPWGKKLLPDHADPGS*QTHSTG Trigger: GCCAGTTGAATGTGTCTGTCAACTGCCTGGATCAGC...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCATTCCGAGGGCCGTGGTaGAATGCAGATGCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISFRGPW*NADASS Trigger: ACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAA...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | AATATGATCTCCTACTATGAGGCACCTTGGGGAAAGAAACTCCTTCCAGATCACCCTCCCCTGAGTCCTTaGTTGAAGGTGATAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NMISYYEAPWGKKLLPDHPPLSP*LKVITA Trigger: GGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGG...GTGATCTGGAAGGAGTTTCTTTCCCCAAGGTGCCTCATAGTAGGAGATCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGAGCATCAGGGTAAACTaGGGTGCTCTCAAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLSIRVN*GALKKD Trigger: GTCCTTTTTGAGAGCACCCCAGTTTACCCTGATGCT...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCCACTCCCAGGCTTCGTaGTTGATAGGCTCTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: HDFTICITHQCPENLRHIHSQAS*LIGSPT Trigger: AGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTG...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCAATCTTCCGAGGGCCGTaGTGCAATGCAGATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISIFRGP*CNADAS Trigger: GGAGGCATCTGCATTGCACCACGGCCCTCGGAAGAT...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GAGAAAGAAAAAGGGGCTTCAGCTTCAAATAGGGCAGTAGATGGGTCATGTGTTATGCCTGGCCAAGCTTaGGAAATACACAAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKEKGASASNRAVDGSCVMPGQA*EIHKAP Trigger: TGGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCAT...AACACATGACCCATCTACTGCCCTATTTGAAGCTGAAGCCCCTTTTTCTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCGAGCTCCGTCTCCAGTaGAGTAATAACCTGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: HDFTICITHQCPENLRHIELRLQ*SNNLGT Trigger: CGTACCCAGGTTATTACTTCACTGGAGACGGAGCTC...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GCCACGTCCATCACATGGCTCTTCACTGCTGATTGTAACAAAGGACTATTAAGACCCAGCCAAGGACTCTaGACTAAAGCCAGCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ATSITWLFTADCNKGLLRPSQGL*TKASKY Trigger: GTATTTGCTGGCTTTAGTGCAGAGTCCTTGGCTGGG...TCTTAATAGTCCTTTGTTACAATCAGCAGTGAAGAGCCATGTGATGGACGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | CATGACTTCACTATTTGCATCACTCACCAATGTCCAGAGAACTTAAGGCACATCGTCTCTTCAGTGTATTaGCCAGGCGGCATGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HDFTICITHQCPENLRHIVSSVY*PGGMWS Trigger: AGACCACATGCCGCCTGGCCAATACACTGAAGAGAC...GATGTGCCTTAAGTTCTCTGGACATTGGTGAGTGATGCAAATAGTGAAGTCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCAAAACAGGGGCCTCCTTaGCCATCTCCTGTTCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISKQGPP*PSPVQG Trigger: CCCTTGAACAGGAGATGGCCAAGGAGGCCCCTGTTT...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | AAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTTCATACTTCTaGAAGGCACTCAAGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGDSSHGVCVCVCVCVCVCSSYF*KALKIS Trigger: AGAAATCTTGAGTGCCTTCCAGAAGTATGAAGAGCA...CACACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| 3UTR CAA 72 bp | CTGGTCACCCTGTGCTGGCTTAGTGCCAATTATGACTaGATTCTGGAAACCAGATGTATGACAAAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVTLCWLSANYD*ILETRCMTKAF Trigger: GAAGGCCTTTGTCATACATCTGGTTTCCAGAATCAAGTCATAATTGGCACTAAGCCAGCACAGGGTGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCGAAGCTCCCTGTAAGTaGTTCTCACTTCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKETPSRSQLRETNPNDFEAPCK*FSLLSQ Trigger: CTGGGACAGAAGTGAGAATCACTTACAGGGAGCTTC...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | GGGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCTGCATTTGGCATCATTaGTCCTCCCAGCCAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GKETPSRSQLRETNPNDFCIWHH*SSQPRT Trigger: AGTCCTTGGCTGGGAGGATCAATGATGCCAAATGCA...GAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | AAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACAAGTAACACGGTCCCCTCGGTaGACTCCATGTCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLPDHSLEKRTQMISQVTRSPR*TPCLFS Trigger: ACTGAAGAGACATGGAGTGCACCGAGGGGACCGTGT...TACTTGTGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCAAGAGCATGTCTTCACTaGTCATGCTCTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISRACLH*SCSQGC Trigger: GCACCCCTGAGAGCATGAGCAGTGAAGACATGCTCT...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCAAATGACAGCAGTCTCTaGAACAGCGGGATGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISNDSSL*NSGMVS Trigger: GCTGACCATCCCGCTGTTCCAGAGACTGCTGTCATT...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR TCA 90 bp | GCCACGTCCATCACATGGCTCTTCACTGCTGATTGTAACAAAGGACTATTAAGATCTCCTTTGATATCATaGGGGTACCCAATGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATSITWLFTADCNKGLLRSPLIS*GYPMTA Trigger: TGCTGTCATTGGGTACCCTCATGATATCAAAGGAGA...TCTTAATAGTCCTTTGTTACAATCAGCAGTGAAGAGCCATGTGATGGACGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCACACAATGAAGGCAAATaGAGCTTCTCCTTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: GKKLLPDHSLEKRTQMISHNEGK*SFSFDI Trigger: GATATCAAAGGAGAAGCTGCATTTGCCTTCATTGTG...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 90 bp | TCACGGGCCAGCGGCCCCCAGAAGGCGGCCGGCTCCTGGGCTGCCTaGGCGCTCAACGCGGGGTACGAGCCTGGTTGCGCTGCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRASGPQKAAGSWAA*ALNAGYEPGCAAAG Trigger: TCCTGCAGCAGCGCAACCAGGCTCGTACCCCGCGTTGAGCGCTCAGGCAGCCCAGGAGCCGGCCGCCTTCTGGGGGCCGCTGGCCCGTGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 90 bp | GGCCATGCCCGGGAGGATCTCTGCCCCATCTTCCGAGGGCCGTGGTaGAATGCAGATGCCTCCAGTTTCCGTTTGCCACCAAGTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHAREDLCPIFRGPW*NADASSFRLPPSVH Trigger: GTGGACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCCTCCCGGGCATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 90 bp | TGCCCGGGAGGATCTCTGCCCCATCTTCCGAGGGCCGTGGTGCAATaGAGATGCCTCCAGTTTCCGTTTGCCACCAAGTGTCCACCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPGGSLPHLPRAVVQ*RCLQFPFATKCPPV Trigger: CACTGGTGGACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCCTCCCGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | CATGGCCATGCCCGGGAGGATCTCTGCCCCATCTTCCGAGGGCCGTaGTGCAATGCAGATGCCTCCAGTTTCCGTTTGCCACCAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HGHAREDLCPIFRGP*CNADASSFRLPPSV Trigger: GACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCCTCCCGGGCATGGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | CATCTGCCATCACCCACGACTTTGTGGAGCCACTCCCAGGCTTCGTaGTTGATAGGCTCTCCCACTGACCCCAGTGTGCGCAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLPSPTTLWSHSQAS*LIGSPTDPSVRREE Trigger: CTCTTCCCTGCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CAA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTGGACATGCTGGACTGTaGGGCAGCTCTTCACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDQTEQASFAPRGPAHRAGHAGL*GSSSQL Trigger: AAGCTGTGAAGAGCTGCCCAACAGTCCAGCATGTCC...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CAA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTCACCATAGATGGTCCTaGCCATGCCTGGCCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDQTEQASFAPRGPAHRAHHRWS*PCLAKL Trigger: AAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTG...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CAA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTCGGGATGGTCAGCCATaGCATCCTCAATCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VDQTEQASFAPRGPAHRARDGQP*HPQSLQ Trigger: CTGCAGAGATTGAGGATGCAATGGCTGACCATCCCG...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 90 bp | AGGGGGATATCCAGACTCCCCATGGGAACCTTGGTGTCCGTCCTGTaGGCCACCAGGACATGCTGGACTGTTGGGCAGCTCTTCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RGISRLPMGTLVSVL*ATRTCWTVGQLFTA Trigger: AGCTGTGAAGAGCTGCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGATATCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | CCATCTCCTGTTCAAGGGGGATATCCAGACTCCCCATGGGAACCTTaGTGTCCGTCCTGTGAGCCACCAGGACATGCTGGACTGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPVQGGYPDSPWEP*CPSCEPPGHAGLLG Trigger: GCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGATATCCCCCTTGAACAGGAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | CCTCCTTGGCCATCTCCTGTTCAAGGGGGATATCCAGACTCCCCATaGGAACCTTGGTGTCCGTCCTGTGAGCCACCAGGACATGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPWPSPVQGGYPDSP*EPWCPSCEPPGHAG Trigger: TCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGATATCCCCCTTGAACAGGAGATGGCCAAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS-3UTR CAA 90 bp | GTGGACCAGACAGAACAGGCTTCCTTTGCCCCCAGGGGCCCTGCTCACAGAGCTCCCCTGAGTCCTTGGTaGAAGGTGATAACAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDQTEQASFAPRGPAHRAPLSPW*KVITAL Trigger: CAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGG...AGCTCTGTGAGCAGGGCCCCTGGGGGCAAAGGAAGCCTGTTCTGTCTGGTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 90 bp | GGAGGATCTCTGCCCCATCTTCCGAGGGCCGTGGTGCAATGCAGATaGCTCCAGTTTCCGTTTGCCACCAAGTGTCCACCAGTGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: GGSLPHLPRAVVQCR*LQFPFATKCPPVYI Trigger: GATGTACACTGGTGGACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 90 bp | TTTGTGGAGCCACTCCCAGGCTTCGTGGTTGATAGGCTCTCCCACTaGCCCCAGTGTGCGCAGGGAAGAGCGGTCATACTTTTTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: FVEPLPGFVVDRLSH*PQCAQGRAVILFHP Trigger: TGGGTGAAAAAGTATGACCGCTCTTCCCTGCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 90 bp | TGCCTCCAGTTTCCGTTTGCCACCAAGTGTCCACCAGTGTACATCTaGCATCACCCACGACTTTGTGGAGCCACTCCCAGGCTTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLQFPFATKCPPVYI*HHPRLCGATPRLRG Trigger: ACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGACACTTGGTGGCAAACGGAAACTGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | CACCAAGTGTCCACCAGTGTACATCTGCCATCACCCACGACTTTGTaGAGCCACTCCCAGGCTTCGTGGTTGATAGGCTCTCCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HQVSTSVHLPSPTTL*SHSQASWLIGSPTD Trigger: GTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGACACTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 90 bp | GCCACCCTCTGTCCGGTGAGCTCCGTCTCCAGTGAAGTAATAACCTaGGTACGCTCTGAAGTAGGCATCTACGAACCTCTGGTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ATLCPVSSVSSEVIT*VRSEVGIYEPLVVT Trigger: GGTGACCACCAGAGGTTCGTAGATGCCTACTTCAGAGCGTACCCAGGTTATTACTTCACTGGAGACGGAGCTCACCGGACAGAGGGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 90 bp | GCCTGCCTGTGTATGAACGAGTCCCTTGGGTGTCCCGGTGCTCCCTaGGGTGTAGAGCATAAAGAGCATGTCTTCACTGCTCATGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ACLCMNESLGCPGAP*GVEHKEHVFTAHAL Trigger: GAGAGCATGAGCAGTGAAGACATGCTCTTTATGCTCTACACCTCAGGGAGCACCGGGACACCCAAGGGACTCGTTCATACACAGGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 90 bp | ACTTCAGCAGCAGCCGGACAGCTGTCGGGGCACCATAGAACTGGTTaGTCTTTAGCCTCTGCACTGTCTCCCAGTAACGACCAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSAAAGQLSGHHRTG*SLASALSPSNDQHQ Trigger: CTGATGCTGGTCGTTACTGGGAGACAGTGCAGAGGCTAAAGATCAACCAGTTCTATGGTGCCCCGACAGCTGTCCGGCTGCTGCTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 90 bp | GGATGGTCAGCCATTGCATCCTCAATCTCTGCAGTCCCCAGGCGATaGCCACTGATATTGATGACATCATCCATGCGCCCCGTGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWSAIASSISAVPRR*PLILMTSSMRPVIW Trigger: CCAGATCACGGGGCGCATGGATGATGTCATCAATATCAGTGGTCATCGCCTGGGGACTGCAGAGATTGAGGATGCAATGGCTGACCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS GCA 90 bp | GAAGTAGGCATCTACGAACCTCTGGTGGTCACCATAGATGGTCCTTaGCATGCCTGGCCAAGCTTGGGAAATACACAAGGCCCCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EVGIYEPLVVTIDGP*HAWPSLGNTQGPRD Trigger: GTCTCTGGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGGTTCGTAGATGCCTACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 90 bp | ATCTACGAACCTCTGGTGGTCACCATAGATGGTCCTTGCCATGCCTaGCCAAGCTTGGGAAATACACAAGGCCCCAGAGACATCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: IYEPLVVTIDGPCHA*PSLGNTQGPRDIST Trigger: GGTGGAGATGTCTCTGGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGGTTCGTAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 90 bp | ACTTTCCCAGATCTGGTTTTGGGGAGACGCTTCACCACCAGGATCTaGTCAGGCACAGCATACTTGGCGATCTTGGTGGCCACCGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFPDLVLGRRFTTRI*SGTAYLAILVATDN Trigger: ATTGTCGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAAGCGTCTCCCCAAAACCAGATCTGGGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAACAGGGGCCTCCTaGGCCATCTCCTGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGDSSHGVCVCVCVCVCVQTGAS*AISCSR Trigger: CCTTGAACAGGAGATGGCCAAGGAGGCCCCTGTTTG...CACACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 90 bp | ACACATTCAACTGGCCTCCCAGGAACCAGCCGATCTTGCCCGTCCTaGAGTCACAGTCCCAGACAGTATGGTAAGGAGTGTCCCAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: THSTGLPGTSRSCPS*SHSPRQYGKECPKL Trigger: TAGTTTGGGACACTCCTTACCATACTGTCTGGGACTGTGACTTCAGGACGGGCAAGATCGGCTGGTTCCTGGGAGGCCAGTTGAATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 90 bp | AAGCTATGGTCTCAGGAGACTTCTGCACATGCTGATCCAGGCAGTTaGCAGACACATTCAACTGGCCTCCCAGGAACCAGCCGATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KLWSQETSAHADPGS*QTHSTGLPGTSRSC Trigger: GCAAGATCGGCTGGTTCCTGGGAGGCCAGTTGAATGTGTCTGTCAACTGCCTGGATCAGCATGTGCAGAAGTCTCCTGAGACCATAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 90 bp | AACCTTGGTGTCCGTCCTGTGAGCCACCAGGACATGCTGGACTGTTaGGCAGCTCTTCACAGCTTCATCCACTATTTTCTTCAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLGVRPVSHQDMLDC*AALHSFIHYFLQLH Trigger: GTGGAGCTGAAGAAAATAGTGGATGAAGCTGTGAAGAGCTGCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | TCGTCATTGGACCACAGTGAGTTCTTGCTGCCCCAACCACAAAAGAAAGGACAGAGGAACCAGCCGATCTaGCCCGTCCTGAAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLDHSEFLLPQPQKKGQRNQPI*PVLKSQ Trigger: CTGTGACTTCAGGACGGGCAAGATCGGCTGGTTCCT...CTGTCCTTTCTTTTGTGGTTGGGGCAGCAAGAACTCACTGTGGTCCAATGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCTTCAGTGTATaGGCCAGGCGGCATGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RREILPTVCVCVCVCVCVCLFSV*ARRHVV Trigger: GACCACATGCCGCCTGGCCAATACACTGAAGAGACA...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGAAAAAGGGGCTTCAGCTTCAAATAGGGCAGTAGATGGGTCATGTGTTTGGCACAGGCCAGCATaGCTGCCACAGCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EKEKGASASNRAVDGSCVWHRPA*LPQPVG Trigger: CCCCACTGGCTGTGGCAGCAATGCTGGCCTGTGCCA...AACACATGACCCATCTACTGCCCTATTTGAAGCTGAAGCCCCTTTTTCTTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGTCAGGCACAGCATACTaGGCGATCTTGGTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLSGTAY*AILVAT Trigger: GGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGA...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGAGATTCTTCCCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCATTTGGCATCATaGATCCTCCCAGCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RREILPTVCVCVCVCVCVLHLAS*ILPAKD Trigger: GTCCTTGGCTGGGAGGATCAATGATGCCAAATGCAA...CACACACACACACACACACACACACACACACACCGTGGGAAGAATCTCCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 90 bp | TCCACTATTTTCTTCAGCTCCACCACACGCCCTCCCCTGAGTCCTTaGTTGAAGGTGATAACAGCCTTGCATTTGGCATCATTGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STIFFSSTTRPPLSP*LKVITALHLASLIL Trigger: GAGGATCAATGATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAAGAAAATAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 90 bp | AGCTTCTCCTTTGATATCATGAGGGTACCCAATGACAGCAGTCTCTaGAACAGCGGGATGGTCAGCCATTGCATCCTCAATCTCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFSFDIMRVPNDSSL*NSGMVSHCILNLCS Trigger: ACTGCAGAGATTGAGGATGCAATGGCTGACCATCCCGCTGTTCCAGAGACTGCTGTCATTGGGTACCCTCATGATATCAAAGGAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGAAAAAGGGGCTTCAGCTTCAAATAGGGCAGTAGATGGGTCATGTGTTCATGCCTGGCCAAGCTaGGGAAATACACAAGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: EKEKGASASNRAVDGSCVHAWPS*GNTQGP Trigger: GGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCATG...AACACATGACCCATCTACTGCCCTATTTGAAGCTGAAGCCCCTTTTTCTTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS GCA 90 bp | AACAGCCTTGCATTTGGCATCATTGATCCTCCCAGCCAAGGACTCTaGACTAAAGCCAGCAAATACCACTGTGTGGATAGCTCCAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLAFGIIDPPSQGL*TKASKYHCVDSSNP Trigger: AGGATTGGAGCTATCCACACAGTGGTATTTGCTGGCTTTAGTGCAGAGTCCTTGGCTGGGAGGATCAATGATGCCAAATGCAAGGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | GCCACGTCCATCACATGGCTCTTCACTGCTGATTGTAACAAAGGACTATTAAGACCCTCCCCTGAGTCCTaGGTTGAAGGTGATAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATSITWLFTADCNKGLLRPSPES*VEGDNS Trigger: GCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGG...TCTTAATAGTCCTTTGTTACAATCAGCAGTGAAGAGCCATGTGATGGACGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | GGAAAGAAACTCCTTCCAGATCACAGCTTAGAGAAACGAACCCAAATGATTTCATCCCAGGCTTCGTGGTaGATAGGCTCTCCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GKKLLPDHSLEKRTQMISSQASW*IGSPTD Trigger: GTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGA...TGAAATCATTTGGGTTCGTTTCTCTAAGCTGTGATCTGGAAGGAGTTTCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS-3UTR CAA 90 bp | TTCAAAGGGCACAGTAACTATACTCAGCCACGTCCATCACATGGCTCTTCACTGAAGGTGATAACAGCCTaGCATTTGGCATCATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: FKGHSNYTQPRPSHGSSLKVITA*HLASLI Trigger: GATCAATGATGCCAAATGCAAGGCTGTTATCACCTT...CAGTGAAGAGCCATGTGATGGACGTGGCTGAGTATAGTTACTGTGCCCTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 90 bp | CATGTTCTCATCACTGATGTTATCTTTCAGCACAATGAAGGCAAATaGAGCTTCTCCTTTGATATCATGAGGGTACCCAATGACAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HVLITDVIFQHNEGK*SFSFDIMRVPNDSS Trigger: ACTGCTGTCATTGGGTACCCTCATGATATCAAAGGAGAAGCTGCATTTGCCTTCATTGTGCTGAAAGATAACATCAGTGATGAGAACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 72 bp | AGCGGCCCCCAGAAGGCGGCCGGCTCCTGGGCTGCCTaGGCGCTCAACGCGGGGTACGAGCCTGGTTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPQKAAGSWAA*ALNAGYEPGCA Trigger: AGCGCAACCAGGCTCGTACCCCGCGTTGAGCGCTCAGGCAGCCCAGGAGCCGGCCGCCTTCTGGGGGCCGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | CTGCCATCACCCACGACTTTGTGGAGCCACTCCCAGGCTTCGTGGTaGATAGGCTCTCCCACTGACCCCAGTGTGCGCAGGGAAGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSPTTLWSHSQASW*IGSPTDPSVRREER Trigger: CCGCTCTTCCCTGCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | GCCCGGGAGGATCTCTGCCCCATCTTCCGAGGGCCGTaGTGCAATGCAGATGCCTCCAGTTTCCGTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AREDLCPIFRGP*CNADASSFRLP Trigger: TGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCCTCCCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | CCCACGACTTTGTGGAGCCACTCCCAGGCTTCGTGGTaGATAGGCTCTCCCACTGACCCCAGTGTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTLWSHSQASW*IGSPTDPSVRR Trigger: CCTGCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | TCCAGACTCCCCATGGGAACCTTGGTGTCCGTCCTGTaGGCCACCAGGACATGCTGGACTGTTGGGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRLPMGTLVSVL*ATRTCWTVGQL Trigger: GAGCTGCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | TCACCCACGACTTTGTGGAGCCACTCCCAGGCTTCGTaGTTGATAGGCTCTCCCACTGACCCCAGTGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPTTLWSHSQAS*LIGSPTDPSVR Trigger: GCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | CGGTCCCCTCGGTGCACTCCATGTCTCTTCAGTGTATaGGCCAGGCGGCATGTGGTCTCCAGAAGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPRCTPCLFSV*ARRHVVSRSSL Trigger: CAGGGAGCTTCTGGAGACCACATGCCGCCTGGCCAATACACTGAAGAGACATGGAGTGCACCGAGGGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | CCACTCCCAGGCTTCGTGGTTGATAGGCTCTCCCACTaGCCCCAGTGTGCGCAGGGAAGAGCGGTCATACTT | + |
|
Preference number: 6 (lower is better) Translates to: PLPGFVVDRLSH*PQCAQGRAVIL Trigger: AAGTATGACCGCTCTTCCCTGCGCACACTGGGGTCAGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | CTGCCCCATCTTCCGAGGGCCGTGGTGCAATGCAGATaGCTCCAGTTTCCGTTTGCCACCAAGTGTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPHLPRAVVQCR*LQFPFATKCPP Trigger: TGGTGGACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | GGTCCCCTCGGTGCACTCCATGTCTCTTCAGTGTATTaGCCAGGCGGCATGTGGTCTCCAGAAGCTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPLGALHVSSVY*PGGMWSPEAPC Trigger: ACAGGGAGCTTCTGGAGACCACATGCCGCCTGGCCAATACACTGAAGAGACATGGAGTGCACCGAGGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | GGATCTCTGCCCCATCTTCCGAGGGCCGTGGTGCAATaGAGATGCCTCCAGTTTCCGTTTGCCACCAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLPHLPRAVVQ*RCLQFPFATKC Trigger: ACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCCCTCGGAAGATGGGGCAGAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | GACAGCAGTCTCTGGAACAGCGGGATGGTCAGCCATTaGATCCTCAATCTCTGCAGTCCCCAGGCGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: DSSLWNSGMVSH*ILNLCSPQAMT Trigger: GGTCATCGCCTGGGGACTGCAGAGATTGAGGATGCAATGGCTGACCATCCCGCTGTTCCAGAGACTGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | GTTCAAGGGGGATATCCAGACTCCCCATGGGAACCTTaGTGTCCGTCCTGTGAGCCACCAGGACATGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VQGGYPDSPWEP*CPSCEPPGHAG Trigger: TCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGATATCCCCCTTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | CCATCTCCTGTTCAAGGGGGATATCCAGACTCCCCATaGGAACCTTGGTGTCCGTCCTGTGAGCCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSPVQGGYPDSP*EPWCPSCEPPG Trigger: TCCTGGTGGCTCACAGGACGGACACCAAGGTTCCCATGGGGAGTCTGGATATCCCCCTTGAACAGGAGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | TGCCACCAAGTGTCCACCAGTGTACATCTGCCATCACCCACGACTTaGTGGAGCCACTCCCAGGCTTCGTGGTTGATAGGCTCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: CHQVSTSVHLPSPTT*WSHSQASWLIGSPT Trigger: AGTGGGAGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGACACTTGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | ACTGGCCTCCCAGGAACCAGCCGATCTTGCCCGTCCTaGAGTCACAGTCCCAGACAGTATGGTAAGGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGLPGTSRSCPS*SHSPRQYGKEC Trigger: ACACTCCTTACCATACTGTCTGGGACTGTGACTTCAGGACGGGCAAGATCGGCTGGTTCCTGGGAGGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS TCA 72 bp | GCAGCCGGACAGCTGTCGGGGCACCATAGAACTGGTTaGTCTTTAGCCTCTGCACTGTCTCCCAGTAACGAC | + |
|
Preference number: 6 (lower is better) Translates to: AAGQLSGHHRTG*SLASALSPSND Trigger: GTCGTTACTGGGAGACAGTGCAGAGGCTAAAGATCAACCAGTTCTATGGTGCCCCGACAGCTGTCCGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | CCTCTGGTGGTCACCATAGATGGTCCTTGCCATGCCTaGCCAAGCTTGGGAAATACACAAGGCCCCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLVVTIDGPCHA*PSLGNTQGPRD Trigger: GTCTCTGGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | GGGTACCCAATGACAGCAGTCTCTGGAACAGCGGGATaGTCAGCCATTGCATCCTCAATCTCTGCAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GYPMTAVSGTAG*SAIASSISAVP Trigger: GGGGACTGCAGAGATTGAGGATGCAATGGCTGACCATCCCGCTGTTCCAGAGACTGCTGTCATTGGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | GATCTGGTTTTGGGGAGACGCTTCACCACCAGGATCTaGTCAGGCACAGCATACTTGGCGATCTTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLVLGRRFTTRI*SGTAYLAILVA Trigger: GGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAAGCGTCTCCCCAAAACCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CAA 72 bp | GACACATTCAACTGGCCTCCCAGGAACCAGCCGATCTaGCCCGTCCTGAAGTCACAGTCCCAGACAGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: DTFNWPPRNQPI*PVLKSQSQTVW Trigger: CCATACTGTCTGGGACTGTGACTTCAGGACGGGCAAGATCGGCTGGTTCCTGGGAGGCCAGTTGAATGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CAA 72 bp | GTGTCCACCAGTGTACATCTGCCATCACCCACGACTTaGTGGAGCCACTCCCAGGCTTCGTGGTTGATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTSVHLPSPTT*WSHSQASWLIG Trigger: GCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS GCA 72 bp | TTTCCGTTTGCCACCAAGTGTCCACCAGTGTACATCTaGCATCACCCACGACTTTGTGGAGCCACTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FPFATKCPPVYI*HHPRLCGATPR Trigger: CCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGACACTTGGTGGCAAACGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS GCA 72 bp | GGCCGTGGTGCAATGCAGATGCCTCCAGTTTCCGTTTaGCACCAAGTGTCCACCAGTGTACATCTGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GRGAMQMPPVSV*HQVSTSVHLPS Trigger: TGATGGCAGATGTACACTGGTGGACACTTGGTGGCAAACGGAAACTGGAGGCATCTGCATTGCACCACGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | CCAACCGATGTCAGCCACACAGCCAAAGACATCACCTaGCTGGTAGTCAAACACGAGCTTGTGCGTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PTDVSHTAKDIT*LVVKHELVRHG Trigger: GCCATGACGCACAAGCTCGTGTTTGACTACCAGCCAGGTGATGTCTTTGGCTGTGTGGCTGACATCGGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CCA 72 bp | TCCACCAGTGTACATCTGCCATCACCCACGACTTTGTaGAGCCACTCCCAGGCTTCGTGGTTGATAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STSVHLPSPTTL*SHSQASWLIGS Trigger: AGAGCCTATCAACCACGAAGCCTGGGAGTGGCTCCACAAAGTCGTGGGTGATGGCAGATGTACACTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
||
| CDS CAA 72 bp | GTCACCATAGATGGTCCTTGCCATGCCTGGCCAAGCTaGGGAAATACACAAGGCCCCAGAGACATCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VTIDGPCHAWPS*GNTQGPRDIST Trigger: GGTGGAGATGTCTCTGGGGCCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | TCTCAGGAGACTTCTGCACATGCTGATCCAGGCAGTTaGCAGACACATTCAACTGGCCTCCCAGGAACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SQETSAHADPGS*QTHSTGLPGTS Trigger: GCTGGTTCCTGGGAGGCCAGTTGAATGTGTCTGTCAACTGCCTGGATCAGCATGTGCAGAAGTCTCCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | GCCATTGCATCCTCAATCTCTGCAGTCCCCAGGCGATaGCCACTGATATTGATGACATCATCCATGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: AIASSISAVPRR*PLILMTSSMRP Trigger: GGGGCGCATGGATGATGTCATCAATATCAGTGGTCATCGCCTGGGGACTGCAGAGATTGAGGATGCAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | CGCTTCACCACCAGGATCTGGTCAGGCACAGCATACTaGGCGATCTTGGTGGCCACCGACAATTTGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RFTTRIWSGTAY*AILVATDNLSS Trigger: TGAACTCAAATTGTCGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | CTCAGTAGTCTCCTCATCACTTTCCCAGATCTGGTTTaGGGGAGACGCTTCACCACCAGGATCTGGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSSLLITFPDLV*GRRFTTRIWSG Trigger: GCCTGACCAGATCCTGGTGGTGAAGCGTCTCCCCAAAACCAGATCTGGGAAAGTGATGAGGAGACTACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | GAACCTTGGTGTCCGTCCTGTGAGCCACCAGGACATGCTGGACTGTaGGGCAGCTCTTCACAGCTTCATCCACTATTTTCTTCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EPWCPSCEPPGHAGL*GSSSQLHPLFSSAP Trigger: TGGAGCTGAAGAAAATAGTGGATGAAGCTGTGAAGAGCTGCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGACACCAAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | TTGGGGAGACGCTTCACCACCAGGATCTGGTCAGGCACAGCATACTaGGCGATCTTGGTGGCCACCGACAATTTGAGTTCATTCACTACC | + |
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Preference number: 6 (lower is better) Translates to: LGRRFTTRIWSGTAY*AILVATDNLSSFTT Trigger: GGTAGTGAATGAACTCAAATTGTCGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAAGCGTCTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | TGCAGAGGGGTCCATACACCACATAGCTGTGTCCTGTaGTCCAACCGATGTCAGCCACACAGCCAAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: CRGVHTPHSCVL*SNRCQPHSQRH Trigger: ATGTCTTTGGCTGTGTGGCTGACATCGGTTGGATCACAGGACACAGCTATGTGGTGTATGGACCCCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | ATCTACGAACCTCTGGTGGTCACCATAGATGGTCCTTaGCATGCCTGGCCAAGCTTGGGAAATACACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: IYEPLVVTIDGP*HAWPSLGNTQG Trigger: GCCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGGTTCGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | CTGTCCCAGGTTCATCTCTCTCCCAGATCAAAGCTATaGTCTCAGGAGACTTCTGCACATGCTGATCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSQVHLSPRSKL*SQETSAHADPG Trigger: GCCTGGATCAGCATGTGCAGAAGTCTCCTGAGACCATAGCTTTGATCTGGGAGAGAGATGAACCTGGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | TTCTTCAGCTCCACCACACGCCCTCCCCTGAGTCCTTaGTTGAAGGTGATAACAGCCTTGCATTTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: FFSSTTRPPLSP*LKVITALHLAS Trigger: TGATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | GTCCGTCCTGTGAGCCACCAGGACATGCTGGACTGTTaGGCAGCTCTTCACAGCTTCATCCACTATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VRPVSHQDMLDC*AALHSFIHYFL Trigger: AAGAAAATAGTGGATGAAGCTGTGAAGAGCTGCCCAACAGTCCAGCATGTCCTGGTGGCTCACAGGACGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | AGTAGGCATCTACGAACCTCTGGTGGTCACCATAGATaGTCCTTGCCATGCCTGGCCAAGCTTGGGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: SRHLRTSGGHHR*SLPCLAKLGKY Trigger: GTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGGTTCGTAGATGCCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | TGTCCGGTGAGCTCCGTCTCCAGTGAAGTAATAACCTaGGTACGCTCTGAAGTAGGCATCTACGAACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CPVSSVSSEVIT*VRSEVGIYEPL Trigger: CAGAGGTTCGTAGATGCCTACTTCAGAGCGTACCCAGGTTATTACTTCACTGGAGACGGAGCTCACCGGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | TCAGTAGTCTCCTCATCACTTTCCCAGATCTGGTTTTaGGGAGACGCTTCACCACCAGGATCTGGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SVVSSSLSQIWF*GDASPPGSGQA Trigger: TGCCTGACCAGATCCTGGTGGTGAAGCGTCTCCCCAAAACCAGATCTGGGAAAGTGATGAGGAGACTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | TTCAGCTCCACCACACGCCCTCCCCTGAGTCCTTGGTaGAAGGTGATAACAGCCTTGCATTTGGCATCATTG | + |
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Preference number: 6 (lower is better) Translates to: FSSTTRPPLSPW*KVITALHLASL Trigger: CAATGATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | TTTCTTCAGCTCCACCACACGCCCTCCCCTGAGTCCTaGGTTGAAGGTGATAACAGCCTTGCATTTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: FLQLHHTPSPES*VEGDNSLAFGI Trigger: GATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | CATCTACGAACCTCTGGTGGTCACCATAGATGGTCCTaGCCATGCCTGGCCAAGCTTGGGAAATACACAAGG | + |
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Preference number: 6 (lower is better) Translates to: HLRTSGGHHRWS*PCLAKLGKYTR Trigger: CCTTGTGTATTTCCCAAGCTTGGCCAGGCATGGCAAGGACCATCTATGGTGACCACCAGAGGTTCGTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | CGCTTCACCACCAGGATCTGGTCAGGCACAGCATACTTGGCGATCTaGGTGGCCACCGACAATTTGAGTTCATTCACTACCATGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RFTTRIWSGTAYLAI*VATDNLSSFTTMFS Trigger: TGAGAACATGGTAGTGAATGAACTCAAATTGTCGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGTGGTGAAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | AAGGACTCTGCACTAAAGCCAGCAAATACCACTGTGTaGATAGCTCCAATCCTGGCACAGGCCAGCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: KDSALKPANTTV*IAPILAQASIA Trigger: AGCAATGCTGGCCTGTGCCAGGATTGGAGCTATCCACACAGTGGTATTTGCTGGCTTTAGTGCAGAGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | CACTGTCTCCCAGTAACGACCAGCATCAGGGTAAACTaGGGTGCTCTCAAAAAGGACTGTGGTAGCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: HCLPVTTSIRVN*GALKKDCGSSI Trigger: AATGGAGCTACCACAGTCCTTTTTGAGAGCACCCCAGTTTACCCTGATGCTGGTCGTTACTGGGAGACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 72 bp | ACCAGGATCTGGTCAGGCACAGCATACTTGGCGATCTaGGTGGCCACCGACAATTTGAGTTCATTCACTACC | + |
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Preference number: 6 (lower is better) Translates to: TRIWSGTAYLAI*VATDNLSSFTT Trigger: GGTAGTGAATGAACTCAAATTGTCGGTGGCCACCAAGATCGCCAAGTATGCTGTGCCTGACCAGATCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | ACTATTTTCTTCAGCTCCACCACACGCCCTCCCCTGAGTCCTTGGTaGAAGGTGATAACAGCCTTGCATTTGGCATCATTGATCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TIFFSSTTRPPLSPW*KVITALHLASLILP Trigger: TGGGAGGATCAATGATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAAGAAAATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | GCATTTGGCATCATTGATCCTCCCAGCCAAGGACTCTaGACTAAAGCCAGCAAATACCACTGTGTGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: AFGIIDPPSQGL*TKASKYHCVDS Trigger: GCTATCCACACAGTGGTATTTGCTGGCTTTAGTGCAGAGTCCTTGGCTGGGAGGATCAATGATGCCAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CAA 90 bp | ATCCACTATTTTCTTCAGCTCCACCACACGCCCTCCCCTGAGTCCTaGGTTGAAGGTGATAACAGCCTTGCATTTGGCATCATTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: IHYFLQLHHTPSPES*VEGDNSLAFGIIDP Trigger: AGGATCAATGATGCCAAATGCAAGGCTGTTATCACCTTCAACCAAGGACTCAGGGGAGGGCGTGTGGTGGAGCTGAAGAAAATAGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS TCA 72 bp | ATCAAAGCTATGGTCTCAGGAGACTTCTGCACATGCTaGTCCAGGCAGTTGACAGACACATTCAACTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: IKAMVSGDFCTC*SRQLTDTFNWP Trigger: AGGCCAGTTGAATGTGTCTGTCAACTGCCTGGATCAGCATGTGCAGAAGTCTCCTGAGACCATAGCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS CCA 72 bp | TTTGATATCATGAGGGTACCCAATGACAGCAGTCTCTaGAACAGCGGGATGGTCAGCCATTGCATCCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FDIMRVPNDSSL*NSGMVSHCILN Trigger: ATTGAGGATGCAATGGCTGACCATCCCGCTGTTCCAGAGACTGCTGTCATTGGGTACCCTCATGATATCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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| CDS GCA 72 bp | ATCACTGATGTTATCTTTCAGCACAATGAAGGCAAATaGAGCTTCTCCTTTGATATCATGAGGGTACCCAAT | + |
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Preference number: 6 (lower is better) Translates to: ITDVIFQHNEGK*SFSFDIMRVPN Trigger: ATTGGGTACCCTCATGATATCAAAGGAGAAGCTGCATTTGCCTTCATTGTGCTGAAAGATAACATCAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028944.4 |
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