Pregenerated sensors for ACSM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030972Ensembl transcript IDs: ENSMUST00000066465.3, ENSMUST00000207307.2, ENSMUST00000207381.2, ENSMUST00000207387.2, ENSMUST00000207440.2, ENSMUST00000207796.2, ENSMUST00000207813.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGACTCCAAGGAGGAGCTaGCCTGCCCCACTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQTPRRS*PAPLPS Trigger: AGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGT...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACAGCCGGAAGAGGGTTaGGACACAGCACAGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: RDSTPRRSWPAPLPSPSEQPEEG*DTAQGG Trigger: ACCACCCTGTGCTGTGTCCCAACCCTCTTCCGGCTG...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAAAAGGAGGAGCTGGCCTaGCCCACTTCCTTCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RDSTPRRSWPAPLPSPSEKEELA*PTSFSF Trigger: GAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTT...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAAACTCCAAGGAGGAGCTaGCCTGCCCCACTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RDSTPRRSWPAPLPSPSETPRRS*PAPLPS Trigger: AGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGT...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTAAGGAGGAGCTGGCCTaGCCCACTTCCTTCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLKEELA*PTSFSF Trigger: GAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTT...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTACTCCAAGGAGGAGCTaGCCTGCCCCACTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLTPRRS*PAPLPS Trigger: AGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGT...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATACCCTCACATCAGGGTTaGGGGCCTCTCCACCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: LMFPLPNPGRRLYLSSSIPSHQG*GPLHPS Trigger: TGACGGGTGGAGAGGCCCTCAACCCTGATGTGAGGG...TATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAAAAAGTCTCCTTGCTCTaGTGCTGCTGTCTTCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: RDSTPRRSWPAPLPSPSEKVSLL*CCCLLG Trigger: CCCGAGAAGACAGCAGCATCAGAGCAAGGAGACTTT...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCTGGACTGGGCAGTGTATGTGAGCTCTGGACCAGGGATGCTCTTACATTTACTCCAAGGAGGAGCTaGCCTGCCCCACTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FAGLGSVCELWTRDALTFTPRRS*PAPLPS Trigger: AGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGT...AAATGTAAGAGCATCCCTGGTCCAGAGCTCACATACACTGCCCAGTCCAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAAAGGAGGAGCTGGCCTaGCCCACTTCCTTCTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LMFPLPNPGRRLYLSSSIKEELA*PTSFSF Trigger: GAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTT...TATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACATAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAGTGTTTCCTCACAGCAGCTTCCCAGTGTAGCTTATGTTCCCCCTCCCCCCAAAATGCCCATTTaGAAGCTGACCATCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: VSSVSSQQLPSVAYVPPPPKMPI*KLTIFD Trigger: ATCAAAGATGGTCAGCTTTCAAATGGGCATTTTGGG...GGGAGGGGGAACATAAGCTACACTGGGAAGCTGCTGTGAGGAAACACTGGAGAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTACTGGGCAGTGTATGTaGGCTCTGGACCAGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: CADLSVPGKQSSLGKSNATGQCM*ALDQGC Trigger: GCATCCCTGGTCCAGAGCTCACATACACTGCCCAGT...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACTAAATGGAAGGGTATaGCAGTCAATGTTATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: RDSTPRRSWPAPLPSPSELNGRV*QSMLCP Trigger: GGGACATAACATTGACTGTCATACCCTTCCATTTAG...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTGGGCATTTGCTGGACTaGGCAGTGTATGTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: MFPLPNPGRRLYLSSSIVGHLLD*AVYVSS Trigger: AGAGCTCACATACACTGCCCAGTCCAGCAAATGCCC...AACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTAGGCTGGCTAGCCAGCAAGCTCTCGGGATCTTCTTGTCTTCCTCTCCCAAAGCTGACCATCTTTaGTATCTATTCTTTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LARLASQQALGIFLSSSPKADHL*YLFFEG Trigger: CCCTTCAAAGAATAGATATCAAAGATGGTCAGCTTT...GGGAGAGGAAGACAAGAAGATCCCGAGAGCTTGCTGGCTAGCCAGCCTAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGGTACTTACTGGGCAGTGTATGTaGGCTCTGGACCAGGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: IAIRDLNIGCSCITQEVLTGQCM*ALDQGC Trigger: GCATCCCTGGTCCAGAGCTCACATACACTGCCCAGT...AAGTACCTCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR CCA 90 bp | GACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGGGACACAGCACAGGGTaGTTATTGGGAACCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: DFIQRVTFIPTGIMRPRMGHSTG*LLGTCR Trigger: TCTGCAGGTTCCCAATAACCACCCTGTGCTGTGTCC...CATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTGCACAGGGTGGTTATTaGGAACCTGCAGAGAGTATT | + |
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Preference number: 2 (lower is better) Translates to: MFPLPNPGRRLYLSSSIVAQGGY*EPAESI Trigger: AATACTCTCTGCAGGTTCCCAATAACCACCCTGTGC...AACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTTCATGTTATGTCCCAGATaGTGTTGCCAAATGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: VHRSISLGLHFISPTLGFMLCPR*CCQMTS Trigger: TGAAGTCATTTGGCAACAGCATCTGGGACATAACAT...GAAACCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTACATTGTTGATTGTCTTCACATGCTCCTaGAGTTCCCTGGTCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PNPGRRLYLSSSIVTLLIVFTCS*SSLVRA Trigger: AGCCCTGACCAGGGAACTCCAGGAGCATGTGAAGAC...AATCAACAATGTAACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTGATATCTATTCTTTaGAGGGATAGTACTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: FSASQHLSWVAFHLPHSWLISIL*RDSTPR Trigger: CCTTGGAGTACTATCCCTTCAAAGAATAGATATCAA...CCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTTCTTGATATCTATTCTTTaGAGGGATAGTACTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VHRSISLGLHFISPTLGFLISIL*RDSTPR Trigger: CCTTGGAGTACTATCCCTTCAAAGAATAGATATCAA...GAAACCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTTCAAAGCTGACCATCTTTaGTATCTATTCTTTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VHRSISLGLHFISPTLGFKADHL*YLFFEG Trigger: CCCTTCAAAGAATAGATATCAAAGATGGTCAGCTTT...GAAACCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTCCCAAAATGCCCATTTaGAAGCTGACCATCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: MFPLPNPGRRLYLSSSIVPKMPI*KLTIFD Trigger: ATCAAAGATGGTCAGCTTTCAAATGGGCATTTTGGG...AACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATATGTCCCAGATGCTGTTaGCAAATGACTTCATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LMFPLPNPGRRLYLSSSICPRCC*QMTSSK Trigger: TTTGGATGAAGTCATTTGGCAACAGCATCTGGGACA...TATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATGTTCCCCCTCCCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATACACATTCATTCCCACTaGCATAATGAGACCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LMFPLPNPGRRLYLSSSIHIHSH*HNETKD Trigger: ATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTG...TATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGGGAGGGGGAACATAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR CAA 90 bp | TCTAAATGGAAGGGTATGACAGTCAATGTTATGTCCCAGATGCTGTaGCCAAATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: SKWKGMTVNVMSQML*PNDFIQRVTFIPTG Trigger: GCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATTTGGCAACAGCATCTGGGACATAACATTGACTGTCATACCCTTCCATTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATGAAGAGGGTCCAGGCTaGTTTCACCCATCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNEEGPG*FHPSSV Trigger: GACACTGGATGGGTGAAAGCAGCCTGGACCCTCTTC...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTTCAAAAGTGTGTCTAAATaGAAGGGTATGACAGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: VHRSISLGLHFISPTLGFKSVSK*KGMTVN Trigger: ATTGACTGTCATACCCTTCCATTTAGACACACTTTT...GAAACCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR TCA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGCCCAAAATGCCCATTTaGAAGCTGACCATCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRPKMPI*KLTIFD Trigger: ATCAAAGATGGTCAGCTTTCAAATGGGCATTTTGGG...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAAAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTTTGATATCTATTCTTTaGAGGGATAGTACTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LRKPGRWQVSNIMSPVFPLISIL*RDSTPR Trigger: CCTTGGAGTACTATCCCTTCAAAGAATAGATATCAA...AGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTTTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATTGTCCCAGATGCTGTTaGCAAATGACTTCATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNCPRCC*QMTSSK Trigger: TTTGGATGAAGTCATTTGGCAACAGCATCTGGGACA...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATCACATTCATTCCCACTaGCATAATGAGACCAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNHIHSH*HNETKD Trigger: ATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTG...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR GCA 72 bp | GGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTCAGTaGATCGCAGCATCTCTCTTGGGTTGCATTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: GLPHFLLLQNLQ*IAASLLGCISS Trigger: AGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
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| 3UTR-3UTR CAA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCGTCTGGCTCTTCCACTaGTCCCTCACATCAGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPVWLFH*SLTSGL Trigger: CAACCCTGATGTGAGGGACAAGTGGAAGAGCCAGAC...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR TCA 72 bp | CATTGGTTGTTCATGCATTACCCAGGAGGTACTTTATaGTTAGCACCATCTCTCAGGCCCAGGAGAAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: HWLFMHYPGGTL*LAPSLRPRRKD Trigger: GTCTTTTCTCCTGGGCCTGAGAGATGGTGCTAATCATAAAGTACCTCCTGGGTAATGCATGAACAACCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR GCA 72 bp | TGTCTTCCTCTCCCACTAAGGTTGAGGTTACAGATGTaGATAGCCACAGATGGCTTTTACATAGCTATCAGG | + |
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Preference number: 3 (lower is better) Translates to: CLPLPLRLRLQM*IATDGFYIAIR Trigger: CCTGATAGCTATGTAAAAGCCATCTGTGGCTATGCACATCTGTAACCTCAACCTTAGTGGGAGAGGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR CAA 90 bp | AAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTCACAGCATTGGAACTTGTACCTaGTCAGATCCTCTTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: KPGRWQVSNIMSPVFPHSIGTCT*SDPLVQ Trigger: TTGTACAAGAGGATCTGACAAGGTACAAGTTCCAAT...GCTGTGAGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR CAA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGGAAAACAGAGTTCTCTaGGTAAAAGCAATGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRENRVL*VKAMLR Trigger: CCTCAGCATTGCTTTTACCAAGAGAACTCTGTTTTC...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| 3UTR CCA 72 bp | ACTAAGGTTGAGGTTACAGATGTGCATAGCCACAGATaGCTTTTACATAGCTATCAGGGATCTGAACATTGG | + |
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Preference number: 3 (lower is better) Translates to: TKVEVTDVHSHR*LLHSYQGSEHW Trigger: CCAATGTTCAGATCCCTGATAGCTATGTAAAAGCCATCTGTGGCTATGCACATCTGTAACCTCAACCTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAGAAAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTGTCGAGTTTCTTGAATaGCCACAGATGACAACTGTT | + |
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Preference number: 3 (lower is better) Translates to: LRKPGRWQVSNIMSPVFPVEFLE*PQMTTV Trigger: AACAGTTGTCATCTGTGGCAATTCAAGAAACTCGAC...AGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTTACATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGAAAACAGAGTTCTCTaGGTAAAAGCAATGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LLHSYQGSEHWLFMHYPGENRVL*VKAMLR Trigger: CCTCAGCATTGCTTTTACCAAGAGAACTCTGTTTTC...TCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTATGTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR CAA 90 bp | CATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGGTACTTATTTCTCTATTGCTTaGGCAGTTGTGTGTGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: HSYQGSEHWLFMHYPGGTYFSIA*AVVCVF Trigger: GAAAACACACACAACTGCCAAAGCAATAGAGAAATA...AGTACCTCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR-3UTR CAA 90 bp | CTTTTACATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGACTATTGCTTTGGCAGTaGTGTGTGTTTTCAGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LLHSYQGSEHWLFMHYPGLLLWQ*CVFSVL Trigger: TAAAACTGAAAACACACACAACTGCCAAAGCAATAG...TCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTATGTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| 3UTR CCA 72 bp | CTTTTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATaGAAGGGTATGACAGTCAATGTTATGTCCCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LFFIVSPKSVSK*KGMTVNVMSQM Trigger: CATCTGGGACATAACATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| 3UTR CCA 72 bp | ATTAGATGTTTCTACTTCTTAAGAAAACCTGGGAGATaGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IRCFYFLRKPGR*QVSNIMSPVFP Trigger: AGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTTTCTTAAGAAGTAGAAACATCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
||
| CDS-3UTR TCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCCTCACATCAGGGTTaGGGGCCTCTCCACCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDSTPRRSWPAPLPSPSEPSHQG*GPLHPS Trigger: TGACGGGTGGAGAGGCCCTCAACCCTGATGTGAGGG...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCCCTCACATCAGGGTTaGGGGCCTCTCCACCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTPSHQG*GPLHPS Trigger: TGACGGGTGGAGAGGCCCTCAACCCTGATGTGAGGG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTGAACTCCTCAGAGCCTaGCAGGCCAGGCCTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSTPRRSWPAPLPSPSEPELLRA*QARPLS Trigger: GCTAAGAGGCCTGGCCTGCCAGGCTCTGAGGAGTTC...AGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGGATCGGGGGAGGTGGTaGCTGTGTGTGAATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQDRGRW*LCVNPA Trigger: TGCAGGATTCACACACAGCCACCACCTCCCCCGATC...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGAACTCCTCAGAGCCTaGCAGGCCAGGCCTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTELLRA*QARPLS Trigger: GCTAAGAGGCCTGGCCTGCCAGGCTCTGAGGAGTTC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGTCCTTCGCTGTCAGCTaGGAGACTCCTGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQSFAVS*ETPGIM Trigger: CATGATCCCAGGAGTCTCCCAGCTGACAGCGAAGGA...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCAGCCGGAAGAGGGTTaGGACACAGCACAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTQPEEG*DTAQGG Trigger: ACCACCCTGTGCTGTGTCCCAACCCTCTTCCGGCTG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAAAGTCTCCTTGCTCTaGTGCTGCTGTCTTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQKVSLL*CCCLLG Trigger: CCCGAGAAGACAGCAGCATCAGAGCAAGGAGACTTT...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTTTGGCCCTGGCAGCCTaGAGCCGATACTTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLALAA*SRYLRS Trigger: GGATCTCAAGTATCGGCTGCAGGCTGCCAGGGCCAA...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTTCGAACTCCTCAGAGCCTaGCAGGCCAGGCCTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRSISLGLHFISPTLGFELLRA*QARPLS Trigger: GCTAAGAGGCCTGGCCTGCCAGGCTCTGAGGAGTTC...GAAACCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000207307.2 ENSMUST00000207381.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGCACCCTCTAAGACATTaGCTGCCTTCCTCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQHPLRH*LPSSTA Trigger: AGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTG...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGGGACACAGCACAGGGTaGTTATTGGGAACCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQGHSTG*LLGTCR Trigger: TCTGCAGGTTCCCAATAACCACCCTGTGCTGTGTCC...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTAGCTCCAGGCCTGTCTaGCTCTTCCACTTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTSSRPV*LFHLSL Trigger: GAGGGACAAGTGGAAGAGCCAGACAGGCCTGGAGCT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTGTCTTCACATGCTCCTaGAGTTCCCTGGTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTPRRSWPAPLPSPSEPVFTCS*SSLVRA Trigger: AGCCCTGACCAGGGAACTCCAGGAGCATGTGAAGAC...AGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTTTGGCCCTGGCAGCCTaGAGCCGATACTTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLLALAA*SRYLRS Trigger: GGATCTCAAGTATCGGCTGCAGGCTGCCAGGGCCAA...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGAAGAGGGTCCAGGCTaGTTTCACCCATCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTEEGPG*FHPSSV Trigger: GACACTGGATGGGTGAAAGCAGCCTGGACCCTCTTC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCCAGTGTTTCCTCACAGCAGCTTCCCAGTGTAGCTTATGTTCCCCCTCCCCACCCTCTAAGACATTaGCTGCCTTCCTCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSVSSQQLPSVAYVPPPHPLRH*LPSSTA Trigger: AGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTG...GGGAGGGGGAACATAAGCTACACTGGGAAGCTGCTGTGAGGAAACACTGGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTTCCTTCGCTGTCAGCTaGGAGACTCCTGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTSFAVS*ETPGIM Trigger: CATGATCCCAGGAGTCTCCCAGCTGACAGCGAAGGA...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCACACAGTTGTGCTCTaGAGAAGCCGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTHTVVL*RSRSQE Trigger: CTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGTG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTAATGTTCCACCATCTTaGGGGCCCCTGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTNVPPS*GPLWFH Trigger: GTGGAACCACAGGGGCCCCCAAGATGGTGGAACATT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTAAAGTCTCCTTGCTCTaGTGCTGCTGTCTTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTKVSLL*CCCLLG Trigger: CCCGAGAAGACAGCAGCATCAGAGCAAGGAGACTTT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTTCCAGGACAGCTGGATaGTCAGCAAGTGCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTSRTAG*SASALS Trigger: AGAGAGTGCACTTGCTGAGCATCCAGCTGTCCTGGA...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCGAACTCCTCAGAGCCTaGCAGGCCAGGCCTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPELLRA*QARPLS Trigger: GCTAAGAGGCCTGGCCTGCCAGGCTCTGAGGAGTTC...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCACCCTCTAAGACATTaGCTGCCTTCCTCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTHPLRH*LPSSTA Trigger: AGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTACCAGAAGCTTGGTTTaGAGGGAGGGACAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTTRSLV*REGQSA Trigger: TGCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTCAGACACCAGAAGCTTaGTTTGGAGGGAGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLQTPEA*FGGRDS Trigger: ACTGTCCCTCCCTCCAAACCAAGCTTCTGGTGTCTG...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCAGACACCAGAAGCTTaGTTTGGAGGGAGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTQTPEA*FGGRDS Trigger: ACTGTCCCTCCCTCCAAACCAAGCTTCTGGTGTCTG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | AGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAATCCACCTCCTTCCACTaGCCACAAAACCCAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RDSTPRRSWPAPLPSPSESTSFH*PQNPIH Trigger: ATGGATTGGGTTTTGTGGCCAGTGGAAGGAGGTGGA...TTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGGACACAGCACAGGGTaGTTATTGGGAACCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTGHSTG*LLGTCR Trigger: TCTGCAGGTTCCCAATAACCACCCTGTGCTGTGTCC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GGATGTCTTCAGAGAGGGAAATTAAGCTGTAGGGCATTTGCTGGACTGGGCAGTAGCTCCAGGCCTGTCTaGCTCTTCCACTTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLQRGKLSCRAFAGLGSSSRPV*LFHLSL Trigger: GAGGGACAAGTGGAAGAGCCAGACAGGCCTGGAGCT...ACTGCCCAGTCCAGCAAATGCCCTACAGCTTAATTTCCCTCTCTGAAGACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCCTGTCTTTTCCAGCTaGCTCCACACATCCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTPVFSS*LHTSNT Trigger: TGTGTTGGATGTGTGGAGTCAGCTGGAAAAGACAGG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGTGGTTCCACTGGTaGAGTAGATGGCCACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLWFHW*SRWPLN Trigger: ATTCAGTGGCCATCTACTTCACCAGTGGAACCACAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCTTCAGAGAGGGAAATTAAGCTGTAGGGCATTTGCTGGACTGGGCAGTCTGATGGCATCCACTTaGGGAGCTAGGGCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLQRGKLSCRAFAGLGSLMAST*GARASL Trigger: CAGTGATGCCCTAGCTCCGCAAGTGGATGCCATCAG...ACTGCCCAGTCCAGCAAATGCCCTACAGCTTAATTTCCCTCTCTGAAGACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTACCAGAAGCTTGGTTTaGAGGGAGGGACAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLTRSLV*REGQSA Trigger: TGCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGT...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGCAGACACCAGAAGCTTaGTTTGGAGGGAGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSASQHLSWVAFHLPHSWQTPEA*FGGRDS Trigger: ACTGTCCCTCCCTCCAAACCAAGCTTCTGGTGTCTG...CCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGGACTGGGCAGTGTATGTGAGCTCTGGACCAGGGATGCTCTTACATTTAATGTTCCACCATCTTaGGGGCCCCTGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FAGLGSVCELWTRDALTFNVPPS*GPLWFH Trigger: GTGGAACCACAGGGGCCCCCAAGATGGTGGAACATT...AAATGTAAGAGCATCCCTGGTCCAGAGCTCACATACACTGCCCAGTCCAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTTCCACCTCCTTCCACTaGCCACAAAACCCAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTSTSFH*PQNPIH Trigger: ATGGATTGGGTTTTGTGGCCAGTGGAAGGAGGTGGA...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCAGCCGGAAGAGGGTTaGGACACAGCACAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DFIQRVTFIPTGIMRPRMQPEEG*DTAQGG Trigger: ACCACCCTGTGCTGTGTCCCAACCCTCTTCCGGCTG...CATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTCTGCACATCGTAAGGTaGGCTTGCTTTCCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLLHIVR*ACFPHR Trigger: TCTATGGGGAAAGCAAGCCCACCTTACGATGTGCAG...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207381.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGCACATCGTAAGGTaGGCTTGCTTTCCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLHIVR*ACFPHR Trigger: TCTATGGGGAAAGCAAGCCCACCTTACGATGTGCAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCCTGTCTTTTCCAGCTaGCTCCACACATCCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLPVFSS*LHTSNT Trigger: TGTGTTGGATGTGTGGAGTCAGCTGGAAAAGACAGG...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTGTGGTTCCACTGGTaGAGTAGATGGCCACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLLWFHW*SRWPLN Trigger: ATTCAGTGGCCATCTACTTCACCAGTGGAACCACAG...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCGAAGAGGGTCCAGGCTaGTTTCACCCATCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPEEGPG*FHPSSV Trigger: GACACTGGATGGGTGAAAGCAGCCTGGACCCTCTTC...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTATCCTCGTCCATATGTaGTCTGTCCCCAGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLILVHM*SVPSDV Trigger: TACATCACTGGGGACAGAGCACATATGGACGAGGAT...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTATCCTCGTCCATATGTaGTCTGTCCCCAGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTILVHM*SVPSDV Trigger: TACATCACTGGGGACAGAGCACATATGGACGAGGAT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR GCA 90 bp | GGATGTCTTCAGAGAGGGAAATTAAGCTGTAGGGCATTTGCTGGACTGGGCAGTGTCACTGTCTTCACATaGTCCTGGAGTTCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLQRGKLSCRAFAGLGSVTVFT*SWSSLV Trigger: GACCAGGGAACTCCAGGAGCATGTGAAGACAGTGAC...ACTGCCCAGTCCAGCAAATGCCCTACAGCTTAATTTCCCTCTCTGAAGACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCTCCTTCGCTGTCAGCTaGGAGACTCCTGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPSFAVS*ETPGIM Trigger: CATGATCCCAGGAGTCTCCCAGCTGACAGCGAAGGA...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | ATTGCCCTCCTCATCTACAATCTGCACATCGTAAGGTGGGCTTGCTTTCCCCATACCAGAAGCTTGGTTTaGAGGGAGGGACAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IALLIYNLHIVRWACFPHTRSLV*REGQSA Trigger: TGCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGT...ATGGGGAAAGCAAGCCCACCTTACGATGTGCAGATTGTAGATGAGGAGGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCCACACAGTTGTGCTCTaGAGAAGCCGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPHTVVL*RSRSQE Trigger: CTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGTG...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGCACAGGGTGGTTATTaGGAACCTGCAGAGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTAQGGY*EPAESI Trigger: AATACTCTCTGCAGGTTCCCAATAACCACCCTGTGC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGCAGCCGGAAGAGGGTTaGGACACAGCACAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRQPEEG*DTAQGG Trigger: ACCACCCTGTGCTGTGTCCCAACCCTCTTCCGGCTG...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCTAGGCTGGCTAGCCAGCAAGCTCTCGGGATCTTCTTGTCTTCCTCTCCCTTGAATTGCCACAGATaGCAACTGTTTCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LARLASQQALGIFLSSSPLNCHR*QLFLIV Trigger: GACAATCAGAAACAGTTGTCATCTGTGGCAATTCAA...GGGAGAGGAAGACAAGAAGATCCCGAGAGCTTGCTGGCTAGCCAGCCTAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| CDS-3UTR TCA 90 bp | GATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTTGTCCATAGCATCATaGGCAAAGTTGAAGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSTPRRSWPAPLPSPSEPLSIAS*AKLKYS Trigger: CGAGTACTTCAACTTTGCTCATGATGCTATGGACAA...AGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207381.2 |
||
| CDS-3UTR GCA 90 bp | CATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGGTACTTTGGCCCTGGCAGCCTaGAGCCGATACTTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HSYQGSEHWLFMHYPGGTLALAA*SRYLRS Trigger: GGATCTCAAGTATCGGCTGCAGGCTGCCAGGGCCAA...AGTACCTCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| CDS-3UTR GCA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTATCCTCGTCCATATGTaGTCTGTCCCCAGTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLILVHM*SVPSDV Trigger: TACATCACTGGGGACAGAGCACATATGGACGAGGAT...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCTCCAGGACAGCTGGATaGTCAGCAAGTGCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPSRTAG*SASALS Trigger: AGAGAGTGCACTTGCTGAGCATCCAGCTGTCCTGGA...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGAATCTCCACTTCTaGTTCTCACACAGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLNLHF*FSHSCA Trigger: AGCACAACTGTGTGAGAACCAGAAGTGGAGATTCAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCGGACACAGCACAGGGTaGTTATTGGGAACCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPGHSTG*LLGTCR Trigger: TCTGCAGGTTCCCAATAACCACCCTGTGCTGTGTCC...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGGTCTTCACATGCTCCTaGAGTTCCCTGGTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFIQRVTFIPTGIMRPRMVFTCS*SSLVRA Trigger: AGCCCTGACCAGGGAACTCCAGGAGCATGTGAAGAC...CATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCCCTCCTCATCTACAATCTGCACATCGTAAGGTGGGCTTGCTTTCCCCATGAAGTAGATGGCCACTaGATCTCCACTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IALLIYNLHIVRWACFPHEVDGH*ISTSGS Trigger: AGAACCAGAAGTGGAGATTCAGTGGCCATCTACTTC...ATGGGGAAAGCAAGCCCACCTTACGATGTGCAGATTGTAGATGAGGAGGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTCACAGCCTGTGGTTCCACTGGTaGAGTAGATGGCCACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPGRWQVSNIMSPVFPHSLWFHW*SRWPLN Trigger: ATTCAGTGGCCATCTACTTCACCAGTGGAACCACAG...GCTGTGAGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGATGACAACTGTTTCTaGTTGTCCATAGCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTDDNCF*LSIAFM Trigger: CATGAAGGCTATGGACAATCAGAAACAGTTGTCATC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | GATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTTGAATTGCCACAGATaGCAACTGTTTCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSTPRRSWPAPLPSPSEPLNCHR*QLFLIV Trigger: GACAATCAGAAACAGTTGTCATCTGTGGCAATTCAA...AGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207381.2 ENSMUST00000207440.2 |
||
| CDS-3UTR GCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGATTCCCATAAGATaGAAAGACACTGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLIPIR*KDTGGS Trigger: ACTTCCTCCAGTGTCTTTGCATCTTATGGGAATCAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCACCCTCTAAGACATTaGCTGCCTTCCTCGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFIQRVTFIPTGIMRPRMHPLRH*LPSSTA Trigger: AGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTG...CATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGTCCTTCGCTGTCAGCTaGGAGACTCCTGGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRSFAVS*ETPGIM Trigger: CATGATCCCAGGAGTCTCCCAGCTGACAGCGAAGGA...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTCACACAGTTGTGCTCTaGAGAAGCCGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CADLSVPGKQSSLGKSNAHTVVL*RSRSQE Trigger: CTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGTG...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTAATGTTCCACCATCTTaGGGGCCCCTGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CADLSVPGKQSSLGKSNANVPPS*GPLWFH Trigger: GTGGAACCACAGGGGCCCCCAAGATGGTGGAACATT...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGAGGTTACAGATGTGCATAGCCACAGATGGCTTTTACATAGCTATCAGAGCTCCAGGCCTGTCTaGCTCTTCCACTTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVEVTDVHSHRWLLHSYQSSRPV*LFHLSL Trigger: GAGGGACAAGTGGAAGAGCCAGACAGGCCTGGAGCT...CTGATAGCTATGTAAAAGCCATCTGTGGCTATGCACATCTGTAACCTCAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| CDS-3UTR CCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTAAGATGCAAAGACACTaGAGGAAGTACCTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTKMQRH*RKYLPN Trigger: ATTGGGAAGGTACTTCCTCCAGTGTCTTTGCATCTT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATCCCTCACATCAGGGTTaGGGGCCTCTCCACCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNPSHQG*GPLHPS Trigger: TGACGGGTGGAGAGGCCCTCAACCCTGATGTGAGGG...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTTTGAATTGCCACAGATaGCAACTGTTTCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLNCHR*QLFLIV Trigger: GACAATCAGAAACAGTTGTCATCTGTGGCAATTCAA...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTGTCACTGTCTTCACATaGTCCTGGAGTTCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CADLSVPGKQSSLGKSNAVTVFT*SWSSLV Trigger: GACCAGGGAACTCCAGGAGCATGTGAAGACAGTGAC...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGACCAGAAGCTTGGTTTaGAGGGAGGGACAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRTRSLV*REGQSA Trigger: TGCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGT...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTCTGTGGTTCCACTGGTaGAGTAGATGGCCACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CADLSVPGKQSSLGKSNALWFHW*SRWPLN Trigger: ATTCAGTGGCCATCTACTTCACCAGTGGAACCACAG...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTGGTTGAATTGCCACAGATaGCAACTGTTTCTGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSASQHLSWVAFHLPHSWLNCHR*QLFLIV Trigger: GACAATCAGAAACAGTTGTCATCTGTGGCAATTCAA...CCAAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207381.2 |
||
| CDS-3UTR CCA 90 bp | CATAGCTATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGGTACTCTGCACATCGTAAGGTaGGCTTGCTTTCCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSYQGSEHWLFMHYPGGTLHIVR*ACFPHR Trigger: TCTATGGGGAAAGCAAGCCCACCTTACGATGTGCAG...AGTACCTCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGATAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTCTGCACATCGTAAGGTaGGCTTGCTTTCCCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CADLSVPGKQSSLGKSNALHIVR*ACFPHR Trigger: TCTATGGGGAAAGCAAGCCCACCTTACGATGTGCAG...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR TCA 90 bp | ACTAAGGTTGAGGTTACAGATGTGCATAGCCACAGATGGCTTTTACATAGCTATAAAGTCTCCTTGCTCTaGTGCTGCTGTCTTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKVEVTDVHSHRWLLHSYKVSLL*CCCLLG Trigger: CCCGAGAAGACAGCAGCATCAGAGCAAGGAGACTTT...ATAGCTATGTAAAAGCCATCTGTGGCTATGCACATCTGTAACCTCAACCTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| CDS-3UTR TCA 90 bp | CCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTACATTGTTGATTCCTGTCTTTTCCAGCTaGCTCCACACATCCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PNPGRRLYLSSSIVTLLIPVFSS*LHTSNT Trigger: TGTGTTGGATGTGTGGAGTCAGCTGGAAAAGACAGG...AATCAACAATGTAACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTGGCAGTTGTGTGTGTTTTCAGTTTTAAGCACTATCTCACTGAATATCTTCTGATGGCATCCACTTaGGGAGCTAGGGCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALAVVCVFSFKHYLTEYLLMAST*GARASL Trigger: CAGTGATGCCCTAGCTCCGCAAGTGGATGCCATCAG...AAGATATTCAGTGAGATAGTGCTTAAAACTGAAAACACACACAACTGCCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATCACACAGTTGTGCTCTaGAGAAGCCGCTCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNHTVVL*RSRSQE Trigger: CTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGTG...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | AATGACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGCTGAATCTCCACTTCTaGTTCTCACACAGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDFIQRVTFIPTGIMRPRLNLHF*FSHSCA Trigger: AGCACAACTGTGTGAGAACCAGAAGTGGAGATTCAG...CCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATAATGTTCCACCATCTTaGGGGCCCCTGTGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNNVPPS*GPLWFH Trigger: GTGGAACCACAGGGGCCCCCAAGATGGTGGAACATT...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGGGATCTGAACATTGGTTGTTCATGCATTACCCAGGAGGTACTTTATGATTCCACCTCCTTCCACTaGCCACAAAACCCAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRDLNIGCSCITQEVLYDSTSFH*PQNPIH Trigger: ATGGATTGGGTTTTGTGGCCAGTGGAAGGAGGTGGA...ATCATAAAGTACCTCCTGGGTAATGCATGAACAACCAATGTTCAGATCCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| CDS-3UTR TCA 90 bp | CCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTACATTGTTGATTGAAGTAGATGGCCACTaGATCTCCACTTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNPGRRLYLSSSIVTLLIEVDGH*ISTSGS Trigger: AGAACCAGAAGTGGAGATTCAGTGGCCATCTACTTC...AATCAACAATGTAACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| CDS-3UTR GCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATTCCAGGACAGCTGGATaGTCAGCAAGTGCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNSRTAG*SASALS Trigger: AGAGAGTGCACTTGCTGAGCATCCAGCTGTCCTGGA...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | GCTTTGGCAGTTGTGTGTGTTTTCAGTTTTAAGCACTATCTCACTGAATATCTTCAGACACCAGAAGCTTaGTTTGGAGGGAGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALAVVCVFSFKHYLTEYLQTPEA*FGGRDS Trigger: ACTGTCCCTCCCTCCAAACCAAGCTTCTGGTGTCTG...AAGATATTCAGTGAGATAGTGCTTAAAACTGAAAACACACACAACTGCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| CDS-3UTR CCA 90 bp | CCCAACCCAGGACGTAGGCTATACCTAAGTTCTTCAATAGTTACATTGTTGATTGCACAGGGTGGTTATTaGGAACCTGCAGAGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PNPGRRLYLSSSIVTLLIAQGGY*EPAESI Trigger: AATACTCTCTGCAGGTTCCCAATAACCACCCTGTGC...AATCAACAATGTAACTATTGAAGAACTTAGGTATAGCCTACGTCCTGGGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| CDS-3UTR TCA 90 bp | TTAAGAAAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTGATGACAACTGTTTCTaGTTGTCCATAGCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRKPGRWQVSNIMSPVFPDDNCF*LSIAFM Trigger: CATGAAGGCTATGGACAATCAGAAACAGTTGTCATC...AGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTTTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| 3UTR CAA 72 bp | AAGGGTATGACAGTCAATGTTATGTCCCAGATGCTGTaGCCAAATGACTTCATCCAAAGGGTCACATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KGMTVNVMSQML*PNDFIQRVTFI Trigger: AATGAATGTGACCCTTTGGATGAAGTCATTTGGCAACAGCATCTGGGACATAACATTGACTGTCATACCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATGCACAGGGTGGTTATTaGGAACCTGCAGAGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNAQGGY*EPAESI Trigger: AATACTCTCTGCAGGTTCCCAATAACCACCCTGTGC...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
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| CDS-3UTR CCA 90 bp | GCTTTGGCAGTTGTGTGTGTTTTCAGTTTTAAGCACTATCTCACTGAATATCTTCTGAATCTCCACTTCTaGTTCTCACACAGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALAVVCVFSFKHYLTEYLLNLHF*FSHSCA Trigger: AGCACAACTGTGTGAGAACCAGAAGTGGAGATTCAG...AAGATATTCAGTGAGATAGTGCTTAAAACTGAAAACACACACAACTGCCAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| CDS-3UTR TCA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATGATGACAACTGTTTCTaGTTGTCCATAGCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNDDNCF*LSIAFM Trigger: CATGAAGGCTATGGACAATCAGAAACAGTTGTCATC...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGCTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQLVTID*ALAACS Trigger: GCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAG...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCAGTGTTTCCTCACAGCAGCTTCCCAGTGTAGCTTATGTTCCCCCTCCCCTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSSVSSQQLPSVAYVPPPLVTID*ALAACS Trigger: GCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAG...GGGAGGGGGAACATAAGCTACACTGGGAAGCTGCTGTGAGGAAACACTGGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| CDS-3UTR CAA 90 bp | GATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTCTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSTPRRSWPAPLPSPSEPLVTID*ALAACS Trigger: GCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAG...AGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLVTID*ALAACS Trigger: GCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGCACCAGAAGCTTGGTTaGGAGGGAGGGACAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQHQKLG*EGGTVS Trigger: GCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGTG...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS CCA 90 bp | GACCACACCTGTTCGCATACAAGCCACGCTGATCAGCCACCAATCTaGGAGTCTCGGAAGCACCAGCATCATTCTGTCTCCAGGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DHTCSHTSHADQPPI*ESRKHQHHSVSRLQ Trigger: CTGCAACCTGGAGACAGAATGATGCTGGTGCTTCCGAGACTCCCAGATTGGTGGCTGATCAGCGTGGCTTGTATGCGAACAGGTGTGGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCACCAGAAGCTTGGTTaGGAGGGAGGGACAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTHQKLG*EGGTVS Trigger: GCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGTG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS TCA 90 bp | CACAGTTGTGCTCTGGAGAAGCCGCTCTCAGGAGTTCTCGGAAATTaGTCCAGCCTGGACGGCTGGTGTCAGACACCAGAAGCTTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSCALEKPLSGVLGN*SSLDGWCQTPEAWF Trigger: AAACCAAGCTTCTGGTGTCTGACACCAGCCGTCCAGGCTGGATCAATTTCCGAGAACTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS GCA 90 bp | TGCAGGCCACACACACCCTCTAAGACATTGGCTGCCTTCCTCGACTaGTTCCCCAGCTCCTCAAATGTCCACTTGACTTCTGTTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRPHTPSKTLAAFLD*FPSSSNVHLTSVPE Trigger: CTCAGGAACAGAAGTCAAGTGGACATTTGAGGAGCTGGGGAAGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGTGTGTGGCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CCA 90 bp | TCATTCTGTCTCCAGGTTGCAGGCCACACACACCCTCTAAGACATTaGCTGCCTTCCTCGACTGCTTCCCCAGCTCCTCAAATGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SFCLQVAGHTHPLRH*LPSSTASPAPQMST Trigger: AGTGGACATTTGAGGAGCTGGGGAAGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGTGTGTGGCCTGCAACCTGGAGACAGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTACACCCTCTAAGACATaGGCTGCCTTCCTCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTTPSKT*AAFLDC Trigger: GCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTGCCTGCAGCCGATACTaGAGATCCTTCGCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLACSRY*RSFAVS Trigger: GCTGACAGCGAAGGATCTCAAGTATCGGCTGCAGGC...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | ATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGAACCTTCTGGTTCTCACACAGTaGTGCTCTGGAGAAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: IVLQGGAGLPHFLLLQNLLVLTQ*CSGEAA Trigger: AGCGGCTTCTCCAGAGCACAACTGTGTGAGAACCAG...AAGGTTCTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTCTGGTTCTCACACAGTaGTGCTCTGGAGAAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTLVLTQ*CSGEAA Trigger: AGCGGCTTCTCCAGAGCACAACTGTGTGAGAACCAG...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGTCTGGCTCTTCCACTaGTCCCTCACATCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTVWLFH*SLTSGL Trigger: CAACCCTGATGTGAGGGACAAGTGGAAGAGCCAGAC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTACACCCTCTAAGACATaGGCTGCCTTCCTCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSVHRSISLGLHFISPTLTPSKT*AAFLDC Trigger: GCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGT...AAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| CDS-3UTR CAA 90 bp | CCTTCAGTGCATCGCAGCATCTCTCTTGGGTTGCATTTCATCTCCCCCACTCTTCTGGTTCTCACACAGTaGTGCTCTGGAGAAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSVHRSISLGLHFISPTLLVLTQ*CSGEAA Trigger: AGCGGCTTCTCCAGAGCACAACTGTGTGAGAACCAG...AAGAGTGGGGGAGATGAAATGCAACCCAAGAGAGATGCTGCGATGCACTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| CDS-3UTR CAA 90 bp | TTTGCTGGACTGGGCAGTGTATGTGAGCTCTGGACCAGGGATGCTCTTACATTTACACCCTCTAAGACATaGGCTGCCTTCCTCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FAGLGSVCELWTRDALTFTPSKT*AAFLDC Trigger: GCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGT...AAATGTAAGAGCATCCCTGGTCCAGAGCTCACATACACTGCCCAGTCCAGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GACTTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCACCAGAAGCTTGGTTaGGAGGGAGGGACAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFIQRVTFIPTGIMRPRMHQKLG*EGGTVS Trigger: GCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGTG...CATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTCTCCTTCAGGTCGAGTTTCTTGAATaGCCACAGATGACAACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGIVLQGGAGLPHFLLLQVEFLE*PQMTTV Trigger: AACAGTTGTCATCTGTGGCAATTCAAGAAACTCGAC...CTGAAGGAGAAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCAGGCCATCCACCTCCTaGTTTTCAGACCTCCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPRPSTS*FSDLRD Trigger: GTCTCGGAGGTCTGAAAACAAGGAGGTGGATGGCCT...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207307.2 |
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| CDS-3UTR CAA 90 bp | TGTGCCGATTTGTCTGTCCCAGGAAAACAGAGTTCTCTTGGTAAAAGCAATGCTCTGGTTCTCACACAGTaGTGCTCTGGAGAAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CADLSVPGKQSSLGKSNALVLTQ*CSGEAA Trigger: AGCGGCTTCTCCAGAGCACAACTGTGTGAGAACCAG...AGCATTGCTTTTACCAAGAGAACTCTGTTTTCCTGGGACAGACAAATCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTGTCGAGTTTCTTGAATaGCCACAGATGACAACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTVEFLE*PQMTTV Trigger: AACAGTTGTCATCTGTGGCAATTCAAGAAACTCGAC...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAAAACCTGGGAGATGGCAAGTGTCTAACATCATGTCTCCAGTGTTTCCTACACCCTCTAAGACATaGGCTGCCTTCCTCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRKPGRWQVSNIMSPVFPTPSKT*AAFLDC Trigger: GCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGT...AGGAAACACTGGAGACATGATGTTAGACACTTGCCATCTCCCAGGTTTTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 |
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| CDS-3UTR CAA 90 bp | GCATCCAAATGCCCTTGTGTAGCAGGAAGTGACAGGTGTCCTTCCTGGGGTACTATTGGAACTTGTACCTaGTCAGATCCTCTTGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: ASKCPCVAGSDRCPSWGTIGTCT*SDPLVQ Trigger: TTGTACAAGAGGATCTGACAAGGTACAAGTTCCAAT...AGTACCCCAGGAAGGACACCTGTCACTTCCTGCTACACAAGGGCATTTGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGAGGTTACAGATGTGCATAGCCACAGATGGCTTTTACATAGCTATCAGGTCTGGCTCTTCCACTaGTCCCTCACATCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVEVTDVHSHRWLLHSYQVWLFH*SLTSGL Trigger: CAACCCTGATGTGAGGGACAAGTGGAAGAGCCAGAC...CTGATAGCTATGTAAAAGCCATCTGTGGCTATGCACATCTGTAACCTCAACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
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| CDS-3UTR CAA 90 bp | CTATTCTTTGAAGGGATAGTACTCCAAGGAGGAGCTGGCCTGCCCCACTTCCTTGTCGAGTTTCTTGAATaGCCACAGATGACAACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFFEGIVLQGGAGLPHFLVEFLE*PQMTTV Trigger: AACAGTTGTCATCTGTGGCAATTCAAGAAACTCGAC...AAGGAAGTGGGGCAGGCCAGCTCCTCCTTGGAGTACTATCCCTTCAAAGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207381.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATCACCAGAAGCTTGGTTaGGAGGGAGGGACAGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNHQKLG*EGGTVS Trigger: GCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGGTG...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207440.2 |
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| CDS-3UTR CAA 90 bp | TTCATCCAAAGGGTCACATTCATTCCCACTGGCATAATGAGACCAAGGATGCCCATTGGAACTTGTACCTaGTCAGATCCTCTTGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: FIQRVTFIPTGIMRPRMPIGTCT*SDPLVQ Trigger: TTGTACAAGAGGATCTGACAAGGTACAAGTTCCAAT...GGGCATCCTTGGTCTCATTATGCCAGTGGGAATGAATGTGACCCTTTGGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTTATAGTGAGTCCCAAAAGTGTGTCTAAATGGAAGGGTATGACAGTCAATGTCTGGCTCTTCCACTaGTCCCTCACATCAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFIVSPKSVSKWKGMTVNVWLFH*SLTSGL Trigger: CAACCCTGATGTGAGGGACAAGTGGAAGAGCCAGAC...ATTGACTGTCATACCCTTCCATTTAGACACACTTTTGGGACTCACTATAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066465.3 ENSMUST00000207440.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTGGCAGTTGTGTGTGTTTTCAGTTTTAAGCACTATCTCACTGAATATCTTATTGGAACTTGTACCTaGTCAGATCCTCTTGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: ALAVVCVFSFKHYLTEYLIGTCT*SDPLVQ Trigger: TTGTACAAGAGGATCTGACAAGGTACAAGTTCCAAT...AAGATATTCAGTGAGATAGTGCTTAAAACTGAAAACACACACAACTGCCAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066465.3 |
||
| CDS GCA 72 bp | CAGGGATCGGGGGAGGTGGTGGCTGTGTGTGAATCCTaGAGACTCCCCAGGAACTCCTCAGAGCCTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSGEVVAVCES*RLPRNSSEPGR Trigger: CCTGCCAGGCTCTGAGGAGTTCCTGGGGAGTCTGCAGGATTCACACACAGCCACCACCTCCCCCGATCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS TCA 72 bp | ACCACCTCAGGGATCGGGGGAGGTGGTGGCTGTGTGTaGATCCTGCAGACTCCCCAGGAACTCCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TTSGIGGGGGCV*ILQTPQELLRA Trigger: GGCTCTGAGGAGTTCCTGGGGAGTCTGCAGGATTCACACACAGCCACCACCTCCCCCGATCCCTGAGGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207381.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CAA 72 bp | CTGTTCCTGAGCCGTTCACCCACCAGAATGCAGGATTaGGGGGCCGGTGCCCTGTCTTTTCCAGCTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: LFLSRSPTRMQD*GAGALSFPADS Trigger: GGAGTCAGCTGGAAAAGACAGGGCACCGGCCCCCAAATCCTGCATTCTGGTGGGTGAACGGCTCAGGAACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CAA 90 bp | ATGGCATCCACTTGCGGAGCTAGGGCATCACTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGCCGATACTTGAGATCCTTCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: MASTCGARASLVTID*ALAACSRYLRSFAV Trigger: GACAGCGAAGGATCTCAAGTATCGGCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAGTGATGCCCTAGCTCCGCAAGTGGATGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS TCA 72 bp | CCAGAAGCTTGGTTTGGAGGGAGGGACAGTCAGCACTaGTGGCATCCACTTGCGGAGCTAGGGCATCACTGG | + |
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Preference number: 6 (lower is better) Translates to: PEAWFGGRDSQH*WHPLAELGHHW Trigger: CCAGTGATGCCCTAGCTCCGCAAGTGGATGCCATCAGTGCTGACTGTCCCTCCCTCCAAACCAAGCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CAA 72 bp | ACTTGCGGAGCTAGGGCATCACTGGTGACGATAGACTaGGCCCTGGCAGCCTGCAGCCGATACTTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: TCGARASLVTID*ALAACSRYLRS Trigger: GGATCTCAAGTATCGGCTGCAGGCTGCCAGGGCCAAGTCTATCGTCACCAGTGATGCCCTAGCTCCGCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CCA 72 bp | AGCCGCTCTCAGGAGTTCTCGGAAATTGATCCAGCCTaGACGGCTGGTGTCAGACACCAGAAGCTTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSQEFSEIDPA*TAGVRHQKLGL Trigger: CAAACCAAGCTTCTGGTGTCTGACACCAGCCGTCCAGGCTGGATCAATTTCCGAGAACTCCTGAGAGCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CAA 90 bp | ACACAGTTGTGCTCTGGAGAAGCCGCTCTCAGGAGTTCTCGGAAATaGATCCAGCCTGGACGGCTGGTGTCAGACACCAGAAGCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TQLCSGEAALRSSRK*IQPGRLVSDTRSLV Trigger: AACCAAGCTTCTGGTGTCTGACACCAGCCGTCCAGGCTGGATCAATTTCCGAGAACTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS TCA 72 bp | TCCTCGACTGCTTCCCCAGCTCCTCAAATGTCCACTTaGCTTCTGTTCCTGAGCCGTTCACCCACCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: SSTASPAPQMST*LLFLSRSPTRM Trigger: CATTCTGGTGGGTGAACGGCTCAGGAACAGAAGTCAAGTGGACATTTGAGGAGCTGGGGAAGCAGTCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CCA 72 bp | TGTTCGCATACAAGCCACGCTGATCAGCCACCAATCTaGGAGTCTCGGAAGCACCAGCATCATTCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSHTSHADQPPI*ESRKHQHHSVS Trigger: GGAGACAGAATGATGCTGGTGCTTCCGAGACTCCCAGATTGGTGGCTGATCAGCGTGGCTTGTATGCGAACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CAA 72 bp | ATGGCCACTGAATCTCCACTTCTGGTTCTCACACAGTaGTGCTCTGGAGAAGCCGCTCTCAGGAGTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: MATESPLLVLTQ*CSGEAALRSSR Trigger: CCGAGAACTCCTGAGAGCGGCTTCTCCAGAGCACAACTGTGTGAGAACCAGAAGTGGAGATTCAGTGGCCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS GCA 72 bp | CACACACCCTCTAAGACATTGGCTGCCTTCCTCGACTaGTTCCCCAGCTCCTCAAATGTCCACTTGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: HTPSKTLAAFLD*FPSSSNVHLTS Trigger: AGAAGTCAAGTGGACATTTGAGGAGCTGGGGAAGCAGTCGAGGAAGGCAGCCAATGTCTTAGAGGGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066465.3 ENSMUST00000207307.2 ENSMUST00000207387.2 ENSMUST00000207440.2 ENSMUST00000207796.2 ENSMUST00000207813.2 |
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| CDS CCA 72 bp | GAAGCCCACACTGATTCCCATAAGATGCAAAGACACTaGAGGAAGTACCTTCCCAATGACAATAGCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: EAHTDSHKMQRH*RKYLPNDNSHL Trigger: TAAATGGCTATTGTCATTGGGAAGGTACTTCCTCCAGTGTCTTTGCATCTTATGGGAATCAGTGTGGGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207796.2 |
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