Pregenerated sensors for ACSM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030935Ensembl transcript IDs: ENSMUST00000063770.10, ENSMUST00000106526.2, ENSMUST00000106527.8, ENSMUST00000106528.8, ENSMUST00000106529.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGTTGGTCTGTATAGATGGCTGGTGACGTGTCTGGGAGCTGGCTaGCAAGTTTTCACCTGTGTAAATGCAAGCCGTATTCTCTCCCGT | + |
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Preference number: 1 (lower is better) Translates to: NVGLYRWLVTCLGAG*QVFTCVNASRILSR Trigger: ACGGGAGAGAATACGGCTTGCATTTACACAGGTGAAAACTTGTCAGCCAGCTCCCAGACACGTCACCAGCCATCTATACAGACCAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 90 bp | GAAGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTaGAGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: EESQDFGQKFGYRSS*RSSYLQHEYPGPQH Trigger: ATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR GCA 90 bp | TTGGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTaGAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LARNLGTDQVEEAAT*NMSIQGPSIYQKEL Trigger: GAGCTCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATTTCTGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 90 bp | GAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATaGGTATCCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: EIWVQIKLKKQLLAT*VSRAPAYIKRSSKV Trigger: TACTTTGGAGCTCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR GCA 90 bp | TCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTaGTTAATGAAAATTACCAGGTCCTTGAACAAGGTTAGTGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: SRNTALLAWKMIRDG*LMKITRSLNKVSGV Trigger: GACACCACTAACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CCA 90 bp | ATTTCCTCAGGCTTAGATGATTCTCGGAACACTGCTCTTCTTGCTTaGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACCAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: ISSGLDDSRNTALLA*KMIRDGCLMKITRS Trigger: GGACCTGGTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATCTAAGCCTGAGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CCA 90 bp | AAATACTTTCAATCCAGTTTCAAAGCAGTCTGCCCACATAATCTGTaGTTCCTGCAGACTTGTAGACACTGTGTTTATAGCTACACAGGT | + |
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Preference number: 1 (lower is better) Translates to: KYFQSSFKAVCPHNL*FLQTCRHCVYSYTG Trigger: ACCTGTGTAGCTATAAACACAGTGTCTACAAGTCTGCAGGAACCACAGATTATGTGGGCAGACTGCTTTGAAACTGGATTGAAAGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| 3UTR CCA 90 bp | TGTCTGTGGAATCATAGGTTCTCACTAAGAAGAATCCCAAGATTTTaGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTT | + |
|
Preference number: 1 (lower is better) Translates to: CLWNHRFSLRRIPRF*PEIWVQIKLKKQLL Trigger: AAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTTAGTGAGAACCTATGATTCCACAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACCAGCTACTTGCAACATaGGTATCCAGGGCCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HCSSCLENDQGWLLNENYQLLAT*VSRAPA Trigger: TGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTG...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGCCCACATAATCTGTaGTTCCTGCAGACTTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GDIHFMLADYRSIDMNAECPHNL*FLQTCR Trigger: TCTACAAGTCTGCAGGAACCACAGATTATGTGGGCA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCAAGAATCCCAAGATTTTaGCCAGAAATTTGGGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: AFIAPHRPIMMIKISRWSRIPRF*PEIWVQ Trigger: CTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCT...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CAA 90 bp | TGCTTAATGAAAATTACCAGGTCCTTGAACAAGGTTAGTGGTGTCTaGTCACTTTATTCTGTCATTTTGCGTCCTCGGGTAGTAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: CLMKITRSLNKVSGV*SLYSVILRPRVVVM Trigger: CATGACTACTACCCGAGGACGCAAAATGACAGAATAAAGTGACAAGACACCACTAACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAAGAAGAAGCAGCTACTTaGAACATGAGTATCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LQEVGIEFSGREHSGLYKEEAAT*NMSIQG Trigger: GCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTC...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGAAATGCAGAGGAAAATaGCCAGATGAATTCAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: NLGTDQVEEAATCNMSIQKCRGK*PDEFSL Trigger: CAGACTGAATTCATCTGGGCATTTTCCTCTGCATTT...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTAACTGCTCTTCTTGCTTaGAAAATGATCAGGGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: FMVVPRHSVFDTFISSGLTALLA*KMIRDG Trigger: ACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGT...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CAA 90 bp | TCCTTGAACAAGGTTAGTGGTGTCTTGTCACTTTATTCTGTCATTTaGCGTCCTCGGGTAGTAGTCATGTTCATTAAAATGTTGATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLNKVSGVLSLYSVI*RPRVVVMFIKMLIS Trigger: TGAAATCAACATTTTAATGAACATGACTACTACCCGAGGACGCAAAATGACAGAATAAAGTGACAAGACACCACTAACCTTGTTCAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTACCAAAGTACAGTAAATaGAGAGGAAAATGCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FMVVPRHSVFDTFISSGLPKYSK*RGKCPD Trigger: ATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGG...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAATTTTGGCCAGAAATTTaGGTACAGATCAAGTTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LQEVGIEFSGREHSGLYKFWPEI*VQIKLK Trigger: CTTCAACTTGATCTGTACCCAAATTTCTGGCCAAAA...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 72 bp | CTGTATAGATGGCTGGTGACGTGTCTGGGAGCTGGCTaGCAAGTTTTCACCTGTGTAAATGCAAGCCGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LYRWLVTCLGAG*QVFTCVNASRI Trigger: AATACGGCTTGCATTTACACAGGTGAAAACTTGTCAGCCAGCTCCCAGACACGTCACCAGCCATCTATACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CAA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTGGGTACAGATCAAGTaGAAGAAGCAGCTACTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DDSRNTALLAWKMIRDGCWVQIK*KKQLLA Trigger: TGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCA...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 72 bp | GTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATaGGTATCCAGGGCCCCAGCATATATCAAAAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VQIKLKKQLLAT*VSRAPAYIKRS Trigger: GCTCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 72 bp | AATTTTTCACAAATGTTGGTCTGTATAGATGGCTGGTaGCGTGTCTGGGAGCTGGCTGACAAGTTTTCACCT | + |
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Preference number: 3 (lower is better) Translates to: NFSQMLVCIDGW*RVWELADKFSP Trigger: AGGTGAAAACTTGTCAGCCAGCTCCCAGACACGTCACCAGCCATCTATACAGACCAACATTTGTGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCAAAAATTACCAGGTCCTaGAACAAGGTTAGTGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AFIAPHRPIMMIKISRWSKITRS*NKVSGV Trigger: GACACCACTAACCTTGTTCAAGGACCTGGTAATTTT...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR TCA 72 bp | CAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTaGAGAAGCAGCTACTTGCAACATGAGTATCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QDFGQKFGYRSS*RSSYLQHEYPG Trigger: CCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCAATTTTGGCCAGAAATTaGGGTACAGATCAAGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: AFIAPHRPIMMIKISRWSILARN*GTDQVE Trigger: TTCAACTTGATCTGTACCCAAATTTCTGGCCAAAAT...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CCA 72 bp | GGCTTAGATGATTCTCGGAACACTGCTCTTCTTGCTTaGAAAATGATCAGGGATGGTTGCTTAATGAAAATT | + |
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Preference number: 3 (lower is better) Translates to: GLDDSRNTALLA*KMIRDGCLMKI Trigger: AATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATCTAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR CCA 72 bp | AATCATAGGTTCTCACTAAGAAGAATCCCAAGATTTTaGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NHRFSLRRIPRF*PEIWVQIKLKK Trigger: CTTCTTCAACTTGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTTAGTGAGAACCTATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTAAATGATCAGGGATGGTaGCTTAATGAAAATTACCAG | + |
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Preference number: 3 (lower is better) Translates to: FMVVPRHSVFDTFISSGLNDQGW*LNENYQ Trigger: CTGGTAATTTTCATTAAGCAACCATCCCTGATCATT...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR GCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGATGCCACGGCATCTACTaGTGGGGCCAAAGTATCATC | + |
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Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGCHGIY*WGQSII Trigger: GATGATACTTTGGCCCCAGCAGTAGATGCCGTGGCA...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR TCA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCGGGAGCAGGCTTCTGTaGGTATGTTGGCAAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: DDSRNTALLAWKMIRDGCGSRLL*VCWQIS Trigger: GGAAATTTGCCAACATACTCACAGAAGCCTGCTCCC...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGGGGTCTGGACTGCTaGCAACAGCTGACTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEWGLDC*QQLTLR Trigger: TCGCAGAGTCAGCTGTTGTCAGCAGTCCAGACCCCA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGACATCCGGTAGGCAGTTaGTGCAGAACAGAAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGHPVGS*CRTEDS Trigger: ACTGTCTTCTGTTCTGCACCAACTGCCTACCGGATG...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACAGAACAGAAGACAGTaGTGGGGAACTTGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEQNRRQ*WGTWRG Trigger: CCCTCTCCAAGTTCCCCATCACTGTCTTCTGTTCTG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR TCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGCAGAACAGAAGACAGTaGTGGGGAACTTGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQQNRRQ*WGTWRG Trigger: CCCTCTCCAAGTTCCCCATCACTGTCTTCTGTTCTG...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACTGCTGACAACAGCTaGCTCTGCGATGGAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETADNS*LCDGRM Trigger: CATCCTTCCATCGCAGAGTCAGCTGTTGTCAGCAGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR TCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTATGGGGTCTGGACTGCTaGCAACAGCTGACTCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: FMVVPRHSVFDTFISSGLWGLDC*QQLTLR Trigger: TCGCAGAGTCAGCTGTTGTCAGCAGTCCAGACCCCA...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACTCTGTCTCCTCTTTaGAGGGAGCAGGCTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETLSPL*REQASV Trigger: CACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACAGACAGGCCACATTTaGAAGCCACCACTCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEQTGHI*KPPLWD Trigger: ATCCCAGAGTGGTGGCTTGCAAATGTGGCCTGTCTG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGCCACGGCATCTACTaGTGGGGCCAAAGTATCATC | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAECHGIY*WGQSII Trigger: GATGATACTTTGGCCCCAGCAGTAGATGCCGTGGCA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR CCA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTCATGGACTCATAGTTaGAAAAGTTCTGAGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: DDSRNTALLAWKMIRDGCSWTHS*KSSEGS Trigger: CGACCCCTCAGAACTTTTCCAACTATGAGTCCATGA...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR CCA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCAACCAGAAGGCTGGATTaGAAAGTCTCTTTCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AFIAPHRPIMMIKISRWSTRRLD*KVSFQP Trigger: AGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGT...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGATCTGGGTCAGCTGAGTaGTTCCTGGAATTAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGSGSAE*FLELKL Trigger: CAGTTTTAATTCCAGGAACCACTCAGCTGACCCAGA...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGGGAGCAGGCTTCTGTaGGTATGTTGGCAAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEGSRLL*VCWQIS Trigger: GGAAATTTGCCAACATACTCACAGAAGCCTGCTCCC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAATTTCATCATCTCCTTaGGGTTCCCCCAGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEISSSP*GSPSLL Trigger: GAGAAGGCTGGGGGAACCTCAAGGAGATGATGAAAT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
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| CDS-3UTR TCA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATACTGCTGACAACAGCTaGCTCTGCGATGGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YQKELQSTVNAEENAQMNTADNS*LCDGRM Trigger: CATCCTTCCATCGCAGAGTCAGCTGTTGTCAGCAGT...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACACTCTGTCTCCTCTTTaGAGGGAGCAGGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYTLSPL*REQASV Trigger: CACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGT...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACCGGTAGGCAGTTGGTaGAGAACAGAAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEPVGSW*RTEDSD Trigger: ATCACTGTCTTCTGTTCTGCACCAACTGCCTACCGG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGACCAGCACTGACACAGTaGTTCAAACTGTTGAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGPALTQ*FKLLNL Trigger: TAAGTTCAACAGTTTGAAGCACTGTGTCAGTGCTGG...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGAGCATATCTGAGCACTaGAGCTACACCGGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQSISEH*SYTGAV Trigger: AACTGCTCCGGTGTAGCTGCAGTGCTCAGATATGCT...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGAAAGTGTGGCTGTCACTaGCATATTTCATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGKCGCH*HISSSP Trigger: AGGAGATGATGAAATATGCCAGTGACAGCCACACTT...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACATCCGGTAGGCAGTTaGTGCAGAACAGAAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEHPVGS*CRTEDS Trigger: ACTGTCTTCTGTTCTGCACCAACTGCCTACCGGATG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGCCCAGCCTGTATCTaGAGTATTCCACATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAECPACI*SIPHHI Trigger: GATGTGATGTGGAATACTTCAGATACAGGCTGGGCA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCAGTGCTTCAAACTGTTaGACTTATAGCTGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: DDSRNTALLAWKMIRDGCSASNC*TYSCSC Trigger: ACATGAGCAGCTATAAGTTCAACAGTTTGAAGCACT...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACGCTCAGGAAGAACTTaGAGAGCAATATCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAERSGRT*RAISPS Trigger: AGAAGGGGATATTGCTCTTCAAGTTCTTCCTGAGCG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGCGCTCAGGAAGAACTTaGAGAGCAATATCCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQRSGRT*RAISPS Trigger: AGAAGGGGATATTGCTCTTCAAGTTCTTCCTGAGCG...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGTGTGCAAAAACACATaGTCCTTGGGTCCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEVCKNT*SLGPWR Trigger: TCTCCATGGACCCAAGGAGCATGTGTTTTTGCACAC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACCAGAAGGCTGGATTaGAAAGTCTCTTTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETRRLD*KVSFQP Trigger: AGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACCACTCTGGGATCTTaGGCAGTATCACCATTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETTLGS*AVSPLL Trigger: GAGTAATGGTGATACTGCCCAAGATCCCAGAGTGGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGTGTCCACACAAGTGTaGCTGTCACTGGCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEVSTQV*LSLAYF Trigger: GAAATATGCCAGTGACAGCCACACTTGTGTGGACAC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCTTTCTGGGTCAGCTaGGTGGTTCCTGGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESFWVS*VVPGIK Trigger: TTTAATTCCAGGAACCACTCAGCTGACCCAGAAAGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGTCTTTCTGGGTCAGCTaGGTGGTTCCTGGAATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQSFWVS*VVPGIK Trigger: TTTAATTCCAGGAACCACTCAGCTGACCCAGAAAGA...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGCCAGAACCTTCCATTaGCAGACAATCCTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEARTFH*QTILNQ Trigger: TTGGTTTAGGATTGTCTGTCAATGGAAGGTTCTGGC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTGCCCAGCCTGTATCTaGAGTATTCCACATCACATC | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYCPACI*SIPHHI Trigger: GATGTGATGTGGAATACTTCAGATACAGGCTGGGCA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAGAAGGCTTTCCCATTaGGCCGGGCTTAATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAERRLSH*AGLNFH Trigger: ATGAAAATTAAGCCCGGCTCAATGGGAAAGCCTTCT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGGAAGGATGTTCTATaGGGGCACTTTCTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEWKDVL*GHFLPQ Trigger: TTGAGGTAGAAAGTGCCCTCATAGAACATCCTTCCA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAATCCTAAACCAAAGCTaGTGTGGGTGTGTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEILNQS*CGCVQS Trigger: TGATTGGACACACCCACAGCAGCTTTGGTTTAGGAT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATGTGTGCAAAAACACATaGTCCTTGGGTCCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQKELQSTVNAEENAQMNVCKNT*SLGPWR Trigger: TCTCCATGGACCCAAGGAGCATGTGTTTTTGCACAC...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACGGGGCAAATAGTGTaGAAAAACACATGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETGQIV*KNTCSL Trigger: CAAGGAGCATGTGTTTTTGCACACTATTTGCCCCGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGACGGGGCAAATAGTGTaGAAAAACACATGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQTGQIV*KNTCSL Trigger: CAAGGAGCATGTGTTTTTGCACACTATTTGCCCCGT...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAACCGGTAGGCAGTTGGTaGAGAACAGAAGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQEVGIEFSGREHSGLYKPVGSW*RTEDSD Trigger: ATCACTGTCTTCTGTTCTGCACCAACTGCCTACCGG...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGTAGTCTTCTTCACGTaGTCCTGGATCTCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEVVFFT*SWISFF Trigger: GAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTAC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGTAGTCTTCTTCACGTaGTCCTGGATCTCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQVVFFT*SWISFF Trigger: GAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTAC...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACCATGGCGTGCACTCTTaGCAAGTAGTCTATCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYHGVHS*QVVYQL Trigger: CAGTTGATAGACTACTTGGCAAGAGTGCACGCCATG...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCATGGACTCATAGTTaGAAAAGTTCTGAGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESWTHS*KSSEGS Trigger: CGACCCCTCAGAACTTTTCCAACTATGAGTCCATGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACAGCCTTTTCCATATTaGTCCATTGGTCCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEQPFPY*SIGPGH Trigger: ATGTCCTGGACCAATGGACCAATATGGAAAAGGCTG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATATCCACCAGAAGGCTaGATTGGAAAGTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEYPPEG*IGKSLS Trigger: GGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATACCACTCTGGGATCTTaGGCAGTATCACCATTACTC | + |
|
Preference number: 4 (lower is better) Translates to: YQKELQSTVNAEENAQMNTTLGS*AVSPLL Trigger: GAGTAATGGTGATACTGCCCAAGATCCCAGAGTGGT...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCTGGGTCAGCTGAGTaGTTCCTGGAATTAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESGSAE*FLELKL Trigger: CAGTTTTAATTCCAGGAACCACTCAGCTGACCCAGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATTCTTCACGTGCTCCTaGATCTCCTTTTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEFFTCS*ISFFSC Trigger: GCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| 3UTR CAA 72 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTaGCTTAATGAAAATTACCAGGTCCTTGAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGW*LNENYQVLEQG Trigger: ACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTGGAAGGATGTTCTATaGGGGCACTTTCTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYWKDVL*GHFLPQ Trigger: TTGAGGTAGAAAGTGCCCTCATAGAACATCCTTCCA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACCAGCACTGACACAGTaGTTCAAACTGTTGAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEPALTQ*FKLLNL Trigger: TAAGTTCAACAGTTTGAAGCACTGTGTCAGTGCTGG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCCATATTGGTCCATTaGTCCAGGACATCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESILVH*SRTSFA Trigger: TGCAAAAGATGTCCTGGACCAATGGACCAATATGGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGTCCATATTGGTCCATTaGTCCAGGACATCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQSILVH*SRTSFA Trigger: TGCAAAAGATGTCCTGGACCAATGGACCAATATGGA...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAAGTGTGGCTGTCACTaGCATATTTCATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEKCGCH*HISSSP Trigger: AGGAGATGATGAAATATGCCAGTGACAGCCACACTT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAAGTGTCCACACAAGTGTaGCTGTCACTGGCATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQEVGIEFSGREHSGLYKVSTQV*LSLAYF Trigger: GAAATATGCCAGTGACAGCCACACTTGTGTGGACAC...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAAACCAAAGCTGCTGTaGGTGTGTCCAATCATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEKPKLL*VCPIIL Trigger: TAAGATGATTGGACACACCCACAGCAGCTTTGGTTT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAGAGGGTTTGCAAGATaGAAGTTGATTCAAAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAERGFAR*KLIQNG Trigger: CCCGTTTTGAATCAACTTCCATCTTGCAAACCCTCT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGTCCAGGAGGAAGAGTaGCACCATTTTCATCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEVQEEE*HHFHLK Trigger: TTTTAGATGAAAATGGTGCCACTCTTCCTCCTGGAC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAGTAAAAAGGCCAAATaGTCGCTCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESKKAK*SLRKNL Trigger: CAAGTTCTTCCTGAGCGACCATTTGGCCTTTTTACT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGAGTAAAAAGGCCAAATaGTCGCTCAGGAAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQSKKAK*SLRKNL Trigger: CAAGTTCTTCCTGAGCGACCATTTGGCCTTTTTACT...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGAGTTGAAGCCGTTTTaGAAGGATTATCTACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSYLQHEYPGPQHISKGELKPF*KDYLHN Trigger: ATTATGTAGATAATCCTTCCAAAACGGCTTCAACTC...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTAGCCAGAACCTTCCATTaGCAGACAATCCTAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FMVVPRHSVFDTFISSGLARTFH*QTILNQ Trigger: TTGGTTTAGGATTGTCTGTCAATGGAAGGTTCTGGC...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATTGCAAGATGGAAGTTaGTTCAAAACGGGGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAELQDGS*FKTGQI Trigger: TATTTGCCCCGTTTTGAATCAACTTCCATCTTGCAA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAGTGCTTCAAACTGTTaGACTTATAGCTGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAESASNC*TYSCSC Trigger: ACATGAGCAGCTATAAGTTCAACAGTTTGAAGCACT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTAAGAAGGCTTTCCCATTaGGCCGGGCTTAATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMVVPRHSVFDTFISSGLRRLSH*AGLNFH Trigger: ATGAAAATTAAGCCCGGCTCAATGGGAAAGCCTTCT...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAAATCCTAAACCAAAGCTaGTGTGGGTGTGTCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQEVGIEFSGREHSGLYKILNQS*CGCVQS Trigger: TGATTGGACACACCCACAGCAGCTTTGGTTTAGGAT...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAACTTGGAGAGGGTTTaGAAGATGGAAGTTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAENLERV*KMEVDS Trigger: TGAATCAACTTCCATCTTGCAAACCCTCTCCAAGTT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAATATCCACCAGAAGGCTaGATTGGAAAGTCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQEVGIEFSGREHSGLYKYPPEG*IGKSLS Trigger: GGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATA...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATAGAGGGTTTGCAAGATaGAAGTTGATTCAAAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: YQKELQSTVNAEENAQMNRGFAR*KLIQNG Trigger: CCCGTTTTGAATCAACTTCCATCTTGCAAACCCTCT...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACGTCCAGGAGGAAGAGTaGCACCATTTTCATCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYVQEEE*HHFHLK Trigger: TTTTAGATGAAAATGGTGCCACTCTTCCTCCTGGAC...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACTTTCTACCTCAAATaGTCCAATTCGGTAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAETFYLK*SNSVTR Trigger: TCTGGTTACCGAATTGGACCATTTGAGGTAGAAAGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTATTCTTCACGTGCTCCTaGATCTCCTTTTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FMVVPRHSVFDTFISSGLFFTCS*ISFFSC Trigger: GCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAA...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTTGCAAGATGGAAGTTaGTTCAAAACGGGGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYLQDGS*FKTGQI Trigger: TATTTGCCCCGTTTTGAATCAACTTCCATCTTGCAA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGTCCAGGACATCTTTTaGAAAATTGAAATACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEVQDIF*KIEILW Trigger: CCAGAGTATTTCAATTTTGCAAAAGATGTCCTGGAC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGTCCAGGACATCTTTTaGAAAATTGAAATACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLGTDQVEEAATCNMSIQVQDIF*KIEILW Trigger: CCAGAGTATTTCAATTTTGCAAAAGATGTCCTGGAC...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR GCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACAACTTGGAGAGGGTTTaGAAGATGGAAGTTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYNLERV*KMEVDS Trigger: TGAATCAACTTCCATCTTGCAAACCCTCTCCAAGTT...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATGTTGGCAAATTTCCTaGATAACAACCCAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAECWQIS*ITTQVL Trigger: AAGAACTTGGGTTGTTATCCAGGAAATTTGCCAACA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTAAAACCAAAGCTGCTGTaGGTGTGTCCAATCATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FMVVPRHSVFDTFISSGLKPKLL*VCPIIL Trigger: TAAGATGATTGGACACACCCACAGCAGCTTTGGTTT...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| 3UTR CAA 72 bp | AAGGTTAGTGGTGTCTTGTCACTTTATTCTGTCATTTaGCGTCCTCGGGTAGTAGTCATGTTCATTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KVSGVLSLYSVI*RPRVVVMFIKM Trigger: CATTTTAATGAACATGACTACTACCCGAGGACGCAAAATGACAGAATAAAGTGACAAGACACCACTAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| 3UTR CAA 72 bp | ATCAGGGATGGTTGCTTAATGAAAATTACCAGGTCCTaGAACAAGGTTAGTGGTGTCTTGTCACTTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRDGCLMKITRS*NKVSGVLSLYS Trigger: AGAATAAAGTGACAAGACACCACTAACCTTGTTCAAGGACCTGGTAATTTTCATTAAGCAACCATCCCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTGTTGGCAAATTTCCTaGATAACAACCCAAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCSSCLENDQGWLLNENYCWQIS*ITTQVL Trigger: AAGAACTTGGGTTGTTATCCAGGAAATTTGCCAACA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CCA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGAGTTGAAGCCGTTTTaGAAGGATTATCTACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GDIHFMLADYRSIDMNAEELKPF*KDYLHN Trigger: ATTATGTAGATAATCCTTCCAAAACGGCTTCAACTC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAAACTTTCTACCTCAAATaGTCCAATTCGGTAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQEVGIEFSGREHSGLYKTFYLK*SNSVTR Trigger: TCTGGTTACCGAATTGGACCATTTGAGGTAGAAAGT...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCGCAGACAGGCCACATTaGCAAGCCACCACTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DDSRNTALLAWKMIRDGCADRPH*QATTLG Trigger: TCCCAGAGTGGTGGCTTGCAAATGTGGCCTGTCTGC...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS CCA 90 bp | CTTATAGCTGCTCATGTCATTCTGAACAAGCATCCGGTAGGCAGTTaGTGCAGAACAGAAGACAGTGATGGGGAACTTGGAGAGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIAAHVILNKHPVGS*CRTEDSDGELGEGL Trigger: CAAACCCTCTCCAAGTTCCCCATCACTGTCTTCTGTTCTGCACCAACTGCCTACCGGATGCTTGTTCAGAATGACATGAGCAGCTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GATGATTCTCGGAACACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCCACCAGAAGGCTGGATaGGAAAGTCTCTTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DDSRNTALLAWKMIRDGCHQKAG*ESLFPA Trigger: GGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTG...GCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTGTTCCGAGAATCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS TCA 90 bp | TGTCCACACAAGTGTGGCTGTCACTGGCATATTTCATCATCTCCTTaGGGTTCCCCCAGCCTTCTCTGGAGTGCTGAGACACAATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: CPHKCGCHWHISSSP*GSPSLLWSAETQLI Trigger: AATTAATTGTGTCTCAGCACTCCAGAGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATATGCCAGTGACAGCCACACTTGTGTGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGCAGACAGGCCACATTaGCAAGCCACCACTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEADRPH*QATTLG Trigger: TCCCAGAGTGGTGGCTTGCAAATGTGGCCTGTCTGC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS CCA 90 bp | ATCTCAGCTCTTCTCCATTCCCATCTATCCACCAGAAGGCTGGATTaGAAAGTCTCTTTCCAGCCTTTTCCATATTGGTCCATTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISALLHSHLSTRRLD*KVSFQPFPYWSIGP Trigger: TGGACCAATGGACCAATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGAGCTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CCA 90 bp | ACTCCATCTCAGCTCTTCTCCATTCCCATCTATCCACCAGAAGGCTaGATTGGAAAGTCTCTTTCCAGCCTTTTCCATATTGGTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSQLFSIPIYPPEG*IGKSLSSLFHIGPL Trigger: CAATGGACCAATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGAGCTGAGATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACACCAGAAGGCTGGATaGGAAAGTCTCTTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEHQKAG*ESLFPA Trigger: GGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATACTCTGTCTCCTCTTaGCAGGGAGCAGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEYSVSS*QGAGFC Trigger: ACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGTA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS TCA 90 bp | TATTTCATCATCTCCTTGAGGTTCCCCCAGCCTTCTCTGGAGTGCTaGGACACAATTAATTTGGAGTGGAGATTTTCACATTTAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YFIISLRFPQPSLEC*DTINLEWRFSHLAA Trigger: GGCAGCTAAATGTGAAAATCTCCACTCCAAATTAATTGTGTCTCAGCACTCCAGAGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACCAGCCTTTTCCATATaGGTCCATTGGTCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEPAFSI*VHWSRT Trigger: TGTCCTGGACCAATGGACCAATATGGAAAAGGCTGG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTACTCTGTCTCCTCTTaGCAGGGAGCAGGCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HCSSCLENDQGWLLNENYYSVSS*QGAGFC Trigger: ACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGTA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACACCACTCTGGGATCTaGGGCAGTATCACCATTACT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEHHSGI*GSITIT Trigger: AGTAATGGTGATACTGCCCAAGATCCCAGAGTGGTG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGCACCACTCTGGGATCTaGGGCAGTATCACCATTACT | + |
|
Preference number: 5 (lower is better) Translates to: NLGTDQVEEAATCNMSIQHHSGI*GSITIT Trigger: AGTAATGGTGATACTGCCCAAGATCCCAGAGTGGTG...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCATCTCGTCGTGTTTaGTGTCCACACAAGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAESSRRV*CPHKCG Trigger: GCCACACTTGTGTGGACACAAAACACGACGAGATGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAACAGTGATGGGGAACTaGGAGAGGGTTTGCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAETVMGN*ERVCKM Trigger: CATCTTGCAAACCCTCTCCAAGTTCCCCATCACTGT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATATTTCATCATCTCCTaGAGGTTCCCCCAGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEYFIIS*RFPQPS Trigger: AGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGTATTTCATCATCTCCTaGAGGTTCCCCCAGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLGTDQVEEAATCNMSIQYFIIS*RFPQPS Trigger: AGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATA...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTCATCTCGTCGTGTTTaGTGTCCACACAAGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HCSSCLENDQGWLLNENYSSRRV*CPHKCG Trigger: GCCACACTTGTGTGGACACAAAACACGACGAGATGA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATACAGTGATGGGGAACTaGGAGAGGGTTTGCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: YQKELQSTVNAEENAQMNTVMGN*ERVCKM Trigger: CATCTTGCAAACCCTCTCCAAGTTCCCCATCACTGT...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCGCTCAGGAAGAACTaGAAGAGCAATATCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAESLRKN*KSNIPF Trigger: GAAGGGGATATTGCTCTTCAAGTTCTTCCTGAGCGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAACTCCCTCGTAGAGTaGAAGCCGTTTTGGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAENSLVE*KPFWKD Trigger: ATCCTTCCAAAACGGCTTCAACTCTACGAGGGAGTT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGACTTTTTCAGTTGCTCTaGATCATGGGACTTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: RSSYLQHEYPGPQHISKGLFQLL*IMGLVI Trigger: GATTACAAGTCCCATGATCAAGAGCAACTGAAAAAG...TCCTTTTGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCAGATCTCCTTTTTCAGTaGCTCTTGATCATGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: AFIAPHRPIMMIKISRWSDLLFQ*LLIMGL Trigger: AAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATC...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS GCA 90 bp | AGTTCATACAAACAGAAGGGACATGTCTTTCATGGCGTGCACTCTTaGCAAGTAGTCTATCAACTGTCATCTGTTCATGAAGCAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYKQKGHVFHGVHS*QVVYQLSSVHEAIL Trigger: AAGGATTGCTTCATGAACAGATGACAGTTGATAGACTACTTGGCAAGAGTGCACGCCATGAAAGACATGTCCCTTCTGTTTGTATGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATTCCATATTGGTCCATaGGTCCAGGACATCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEFHIGP*VQDIFC Trigger: GCAAAAGATGTCCTGGACCAATGGACCAATATGGAA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAAGCCAGAACCTTCCATaGACAGACAATCCTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAESQNLP*TDNPKP Trigger: TGGTTTAGGATTGTCTGTCAATGGAAGGTTCTGGCT...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACTCAGTTCATTTCTTTaGACCTTCCCACTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAELSSFL*TFPLTV Trigger: GACTGTCAGTGGGAAGGTCAAAAGAAATGAACTGAG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATTCATGGCGTGCACTCTaGCCAAGTAGTCTATCAACT | + |
|
Preference number: 5 (lower is better) Translates to: YQKELQSTVNAEENAQMNSWRAL*PSSLST Trigger: AGTTGATAGACTACTTGGCAAGAGTGCACGCCATGA...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCATCTGGAATCTCTATTTaGAAGTCTTGTTTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFIAPHRPIMMIKISRWSSGISI*KSCFMD Trigger: GTCCATGAAACAAGACTTCAAAATAGAGATTCCAGA...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATTTCCATATTGGTCCATaGGTCCAGGACATCTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: YQKELQSTVNAEENAQMNFHIGP*VQDIFC Trigger: GCAAAAGATGTCCTGGACCAATGGACCAATATGGAA...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGCTTCTGTGAGTATGTaGGCAAATTTCCTGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEASVSM*ANFLDN Trigger: GTTATCCAGGAAATTTGCCAACATACTCACAGAAGC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | AATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGCTTCTGTGAGTATGTaGGCAAATTTCCTGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: NLGTDQVEEAATCNMSIQASVSM*ANFLDN Trigger: GTTATCCAGGAAATTTGCCAACATACTCACAGAAGC...CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTGATCTGTACCCAAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATAGCCAGAACCTTCCATaGACAGACAATCCTAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: YQKELQSTVNAEENAQMNSQNLP*TDNPKP Trigger: TGGTTTAGGATTGTCTGTCAATGGAAGGTTCTGGCT...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTCATAGCTCCTCACAGGCCAATCATGATGATTAAAATCAGCAGGTGGTCATTAATTTTCATCCCCTaGAAATTTCCACAGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AFIAPHRPIMMIKISRWSLIFIP*KFPQIS Trigger: GCTGATCTGTGGAAATTTCAAGGGGATGAAAATTAA...TGACCACCTGCTGATTTTAATCATCATGATTGGCCTGTGAGGAGCTATGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAATCGCTCAGGAAGAACTaGAAGAGCAATATCCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQEVGIEFSGREHSGLYKSLRKN*KSNIPF Trigger: GAAGGGGATATTGCTCTTCAAGTTCTTCCTGAGCGA...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGTTTGTATAAAAACTCCCTCGTAGAGTaGAAGCCGTTTTGGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQEVGIEFSGREHSGLYKNSLVE*KPFWKD Trigger: ATCCTTCCAAAACGGCTTCAACTCTACGAGGGAGTT...TTTATACAAACCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAAGATCTCCTTTTTCAGTaGCTCTTGATCATGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEDLLFQ*LLIMGL Trigger: AAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATC...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | TATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATCTCAGTTCATTTCTTTaGACCTTCCCACTGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YQKELQSTVNAEENAQMNLSSFL*TFPLTV Trigger: GACTGTCAGTGGGAAGGTCAAAAGAAATGAACTGAG...ATTCATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATTTGCAAGATGGAAGTaGATTCAAAACGGGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAEFARWK*IQNGAN Trigger: ATTTGCCCCGTTTTGAATCAACTTCCATCTTGCAAA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAACTTTTTCAGTTGCTCTaGATCATGGGACTTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAELFQLL*IMGLVI Trigger: GATTACAAGTCCCATGATCAAGAGCAACTGAAAAAG...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATCTGGAATCTCTATTTaGAAGTCTTGTTTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAESGISI*KSCFMD Trigger: GTCCATGAAACAAGACTTCAAAATAGAGATTCCAGA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCTTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAATGAAAATTACTTTGCAAGATGGAAGTaGATTCAAAACGGGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HCSSCLENDQGWLLNENYFARWK*IQNGAN Trigger: ATTTGCCCCGTTTTGAATCAACTTCCATCTTGCAAA...GTAATTTTCATTAAGCAACCATCCCTGATCATTTTCCAAGCAAGAAGAGCAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS-3UTR CAA 90 bp | GGCGACATTCATTTTATGTTGGCAGATTACAGGAGCATTGACATGAATGCAGAATTAATTTTCATCCCCTaGAAATTTCCACAGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDIHFMLADYRSIDMNAELIFIP*KFPQIS Trigger: GCTGATCTGTGGAAATTTCAAGGGGATGAAAATTAA...TTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAACATAAAATGAATGTCGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGGTAGTACCACGGCATTCAGTGTTTGATACTTTTATTTCCTCAGGCTTATTCATGAAGCAATCCTaGTTCCCATTCCTTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FMVVPRHSVFDTFISSGLFMKQS*FPFLFP Trigger: AGGAAAAAGGAATGGGAACAAGGATTGCTTCATGAA...TAAGCCTGAGGAAATAAAAGTATCAAACACTGAATGCCGTGGTACTACCATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
||
| CDS TCA 72 bp | AAGTGTGGCTGTCACTGGCATATTTCATCATCTCCTTaGGGTTCCCCCAGCCTTCTCTGGAGTGCTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KCGCHWHISSSP*GSPSLLWSAET Trigger: TGTCTCAGCACTCCAGAGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATATGCCAGTGACAGCCACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CCA 72 bp | GCCATCATCTCGTCGTGTTTTGTGTCCACACAAGTGTaGCTGTCACTGGCATATTTCATCATCTCCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AIISSCFVSTQV*LSLAYFIISLR Trigger: CCTCAAGGAGATGATGAAATATGCCAGTGACAGCCACACTTGTGTGGACACAAAACACGACGAGATGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CCA 72 bp | CTTCCATTGACAGACAATCCTAAACCAAAGCTGCTGTaGGTGTGTCCAATCATCTTAGGAGGCCCAGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPLTDNPKPKLL*VCPIILGGPVV Trigger: GACAACTGGGCCTCCTAAGATGATTGGACACACCCACAGCAGCTTTGGTTTAGGATTGTCTGTCAATGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CAA 90 bp | CATCTCAGCTCTTCTCCATTCCCATCTATCCACCAGAAGGCTGGATaGGAAAGTCTCTTTCCAGCCTTTTCCATATTGGTCCATTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLSSSPFPSIHQKAG*ESLFPAFSILVHWS Trigger: GGACCAATGGACCAATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGAGCTGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CAA 90 bp | GCAGGAGAAGGCTTTCCCATTGAGCCGGGCTTAATTTTCATCCCCTaGAAATTTCCACAGATCAGCACCGTTTCTGTCTGTCCATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGEGFPIEPGLIFIP*KFPQISTVSVCPYP Trigger: AGGATATGGACAGACAGAAACGGTGCTGATCTGTGGAAATTTCAAGGGGATGAAAATTAAGCCCGGCTCAATGGGAAAGCCTTCTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS GCA 72 bp | ATCTTGGGCAGTATCACCATTACTCTGTCTCCTCTTTaGAGGGAGCAGGCTTCTGTGAGTATGTTGGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ILGSITITLSPL*REQASVSMLAN Trigger: ATTTGCCAACATACTCACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGTAATGGTGATACTGCCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CCA 72 bp | CTTCTCCATTCCCATCTATCCACCAGAAGGCTGGATTaGAAAGTCTCTTTCCAGCCTTTTCCATATTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLHSHLSTRRLD*KVSFQPFPYWS Trigger: GGACCAATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS CAA 72 bp | GGCTTTCCCATTGAGCCGGGCTTAATTTTCATCCCCTaGAAATTTCCACAGATCAGCACCGTTTCTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GFPIEPGLIFIP*KFPQISTVSVC Trigger: ACAGACAGAAACGGTGCTGATCTGTGGAAATTTCAAGGGGATGAAAATTAAGCCCGGCTCAATGGGAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
||
| CDS TCA 72 bp | TTACTCTGTCTCCTCTTTGCAGGGAGCAGGCTTCTGTaGGTATGTTGGCAAATTTCCTGGATAACAACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLCLLFAGSRLL*VCWQISWITTQ Trigger: TTGGGTTGTTATCCAGGAAATTTGCCAACATACTCACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS TCA 72 bp | ATCTCCTTGAGGTTCCCCCAGCCTTCTCTGGAGTGCTaGGACACAATTAATTTGGAGTGGAGATTTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: ISLRFPQPSLEC*DTINLEWRFSH Trigger: ATGTGAAAATCTCCACTCCAAATTAATTGTGTCTCAGCACTCCAGAGAAGGCTGGGGGAACCTCAAGGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS TCA 72 bp | AACACTACTCCATGCAGACTTTGCCCAGCCTGTATCTaGAGTATTCCACATCACATCGGAGGCTATCAAATC | + |
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Preference number: 6 (lower is better) Translates to: NTTPCRLCPACI*SIPHHIGGYQI Trigger: GATTTGATAGCCTCCGATGTGATGTGGAATACTTCAGATACAGGCTGGGCAAAGTCTGCATGGAGTAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CCA 72 bp | CAGCTCTTCTCCATTCCCATCTATCCACCAGAAGGCTaGATTGGAAAGTCTCTTTCCAGCCTTTTCCATATT | + |
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Preference number: 6 (lower is better) Translates to: QLFSIPIYPPEG*IGKSLSSLFHI Trigger: AATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CCA 72 bp | GAGATTTTCACATTTAGCTGCCACGGCATCTACTGCTaGGGCCAAAGTATCATCGGTAATAATGCACTTAGC | + |
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Preference number: 6 (lower is better) Translates to: EIFTFSCHGIYC*GQSIIGNNALS Trigger: GCTAAGTGCATTATTACCGATGATACTTTGGCCCCAGCAGTAGATGCCGTGGCAGCTAAATGTGAAAATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 72 bp | TCTTCTCCATTCCCATCTATCCACCAGAAGGCTGGATaGGAAAGTCTCTTTCCAGCCTTTTCCATATTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSPFPSIHQKAG*ESLFPAFSILV Trigger: GACCAATATGGAAAAGGCTGGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 72 bp | TCTCCTCTTTGCAGGGAGCAGGCTTCTGTGAGTATGTaGGCAAATTTCCTGGATAACAACCCAAGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SPLCREQASVSM*ANFLDNNPSSS Trigger: TGAAGAACTTGGGTTGTTATCCAGGAAATTTGCCAACATACTCACAGAAGCCTGCTCCCTGCAAAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 90 bp | AGGCGCTGTAGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTaGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA | + |
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Preference number: 6 (lower is better) Translates to: RRCSLLHVLLDLLFQ*LLIMGLVIRIQDNK Trigger: TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTACAGCGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 72 bp | CTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTaGATCATGGGACTTGTAATCAGGATTCAGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: LHVLLDLLFQLL*IMGLVIRIQDN Trigger: ATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 72 bp | AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTaGCTCTTGATCATGGGACTTGTAATCAGGATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLLHVLLDLLFQ*LLIMGLVIRIQ Trigger: CTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS CAA 90 bp | ATTACTCTGTCTCCTCTTTGCAGGGAGCAGGCTTCTGTGAGTATGTaGGCAAATTTCCTGGATAACAACCCAAGTTCTTCAAAACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ITLSPLCREQASVSM*ANFLDNNPSSSKLH Trigger: ATGGAGTTTTGAAGAACTTGGGTTGTTATCCAGGAAATTTGCCAACATACTCACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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| CDS GCA 72 bp | AAACAGAAGGGACATGTCTTTCATGGCGTGCACTCTTaGCAAGTAGTCTATCAACTGTCATCTGTTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: KQKGHVFHGVHS*QVVYQLSSVHE Trigger: TTCATGAACAGATGACAGTTGATAGACTACTTGGCAAGAGTGCACGCCATGAAAGACATGTCCCTTCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106529.8 |
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| CDS CCA 72 bp | GGAAGGATTATCTACATAATGAGTAAAAAGGCCAAATaGTCGCTCAGGAAGAACTTGAAGAGCAATATCCCC | + |
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Preference number: 6 (lower is better) Translates to: GRIIYIMSKKAK*SLRKNLKSNIP Trigger: GGGGATATTGCTCTTCAAGTTCTTCCTGAGCGACCATTTGGCCTTTTTACTCATTATGTAGATAATCCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000063770.10 ENSMUST00000106526.2 ENSMUST00000106527.8 ENSMUST00000106528.8 ENSMUST00000106529.8 |
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