Pregenerated sensors for ACSM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030945Ensembl transcript IDs: ENSMUST00000084647.13, ENSMUST00000098084.11, ENSMUST00000123638.2, ENSMUST00000129766.9, ENSMUST00000130583.2, ENSMUST00000167935.10, ENSMUST00000207977.2, ENSMUST00000208019.2
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGAGGGATGTGATCATCTGCTCCCGTGGAGGTGCCTGGAGGTCTaGCTGCATTCTTGGCCTCCCTGTTGCCAGCTATATCCCCATGAG | + |
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Preference number: 1 (lower is better) Translates to: GEGCDHLLPWRCLEV*LHSWPPCCQLYPHE Trigger: CTCATGGGGATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGATCACATCCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CCA 90 bp | GATCATCTGCTCCCGTGGAGGTGCCTGGAGGTCTGCCTGCATTCTTaGCCTCCCTGTTGCCAGCTATATCCCCATGAGTTCTGGATGACA | + |
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Preference number: 1 (lower is better) Translates to: DHLLPWRCLEVCLHS*PPCCQLYPHEFWMT Trigger: TGTCATCCAGAACTCATGGGGATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | ATTGAACTCAGGTCATCAGACTTGGCGACAGGTTCCTTCACCTGCTaGTCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IELRSSDLATGSFTC*SITRAGPFLLSVFF Trigger: GAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAGCAGGTGAAGGAACCTGTCGCCAAGTCTGATGACCTGAGTTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CCA 90 bp | CATCTGATCTCTGGTTTCCTCCTCTGTAAAACTGAGGACAGTAGCTaGAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: HLISGFLLCKTEDSS*SQRERERERERERE Trigger: CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCCAGCTACTGTCCTCAGTTTTACAGAGGAGGAAACCAGAGATCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CCA 90 bp | GAGGTCAGAGGACAACATGCAGGAGTTGGTTCTCTTTCAACCATATaGGTCTTGGGGATTGAACTCAGGTCATCAGACTTGGCGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: EVRGQHAGVGSLSTI*VLGIELRSSDLATG Trigger: ACCTGTCGCCAAGTCTGATGACCTGAGTTCAATCCCCAAGACCCATATGGTTGAAAGAGAACCAACTCCTGCATGTTGTCCTCTGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTaGGGAAGACAGAACCCCATCAAAAGCCTCAGGAGTCTCACTGGG | + |
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Preference number: 1 (lower is better) Translates to: SYISISGDEEVTGKD*GRQNPIKSLRSLTG Trigger: CCCAGTGAGACTCCTGAGGCTTTTGATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
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| 3UTR CCA 90 bp | TACAGGCTACTACGGGTATTTTATCTAAGCCATAGGCAGGAAGGATaGAGCAGAATGAAGGGAGTCAGGGTCATAACTGAGGGACAGCAT | + |
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Preference number: 1 (lower is better) Translates to: YRLLRVFYLSHRQEG*SRMKGVRVITEGQH Trigger: ATGCTGTCCCTCAGTTATGACCCTGACTCCCTTCATTCTGCTCCATCCTTCCTGCCTATGGCTTAGATAAAATACCCGTAGTAGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR GCA 90 bp | TACCAAGAAGATTCATTAACCCTTTCTAGGTTACAAGTGAGACTCTaGCCCCTCAGCAGCTCCTTGACACCTAGATCTGCTGATCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: YQEDSLTLSRLQVRL*PLSSSLTPRSADQV Trigger: AACCTGATCAGCAGATCTAGGTGTCAAGGAGCTGCTGAGGGGGCAGAGTCTCACTTGTAACCTAGAAAGGGTTAATGAATCTTCTTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR GCA 90 bp | AGGATATGCCAACCAGTGTGCAACTCAAGTAAATGCACGAGCTTGTaGTGTCTAAAATGTGCACAATGTGACACACACACACACCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: RICQPVCNSSKCTSL*CLKCAQCDTHTHLV Trigger: TACAAGGTGTGTGTGTGTGTCACATTGTGCACATTTTAGACAGCACAAGCTCGTGCATTTACTTGAGTTGCACACTGGTTGGCATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR GCA 90 bp | GACCATTCTTTCAGGATATGCCAACCAGTGTGCAACTCAAGTAAATaGACGAGCTTGTGCTGTCTAAAATGTGCACAATGTGACACACAC | + |
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Preference number: 1 (lower is better) Translates to: DHSFRICQPVCNSSK*TSLCCLKCAQCDTH Trigger: GTGTGTGTCACATTGTGCACATTTTAGACAGCACAAGCTCGTGCATTTACTTGAGTTGCACACTGGTTGGCATATCCTGAAAGAATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | GGGAGTTATATAGACAGACCTTGTCTCTGTGACTTGACTATTGTGTaGCCGTGGTGGATTATTTATCATCTGATCTCTGGTTTCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GSYIDRPCLCDLTIV*PWWIIYHLISGFLL Trigger: GAGGAGGAAACCAGAGATCAGATGATAAATAATCCACCACGGTCACACAATAGTCAAGTCACAGAGACAAGGTCTGTCTATATAACTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | GATGCACCAGCTAGTACTAGTCAGACTGCTGTTATTCTTGTTCCCTaGCCTCAAAAATCCTTCACTCGGTTATCAAACTTTCTAACGCCT | + |
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Preference number: 1 (lower is better) Translates to: DAPASTSQTAVILVP*PQKSFTRLSNFLTP Trigger: AGGCGTTAGAAAGTTTGATAACCGAGTGAAGGATTTTTGAGGTCAGGGAACAAGAATAACAGCAGTCTGACTAGTACTAGCTGGTGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR GCA 90 bp | TGTCACTGGGTGTTTTCCAAGAAGACCCTGGCTCTTGAGAACCTTTaGTTTCATTTCCTGATTGCCCAGTTCTACCAAGAAGATTCATTA | + |
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Preference number: 1 (lower is better) Translates to: CHWVFSKKTLALENL*FHFLIAQFYQEDSL Trigger: TAATGAATCTTCTTGGTAGAACTGGGCAATCAGGAAATGAAAGCAAAGGTTCTCAAGAGCCAGGGTCTTCTTGGAAAACACCCAGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | GATGCTAGAGAGAAGAGAGGCTTTGAAGTTGTCCAAACATACCTGTaGGCTTTTCAAGAGCTGGTCAATTTGTGTCCAAATATCAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: DAREKRGFEVVQTYL*AFQELVNLCPNIRL Trigger: TAGCCTGATATTTGGACACAAATTGACCAGCTCTTGAAAAGCTCACAGGTATGTTTGGACAACTTCAAAGCCTCTCTTCTCTCTAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | GAAAGATCAAGAACAACTATTGTAAATGCCAATGACACTGCCCTGTaGGGGTCTGGAAACCCTCTTAGAGTTTTCATACAGCTCATAGAT | + |
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Preference number: 1 (lower is better) Translates to: ERSRTTIVNANDTAL*GSGNPLRVFIQLID Trigger: ATCTATGAGCTGTATGAAAACTCTAAGAGGGTTTCCAGACCCTCACAGGGCAGTGTCATTGGCATTTACAATAGTTGTTCTTGATCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR TCA 90 bp | GCTGTGCATGTTGAGGGTGCATGCTGGTTGATGTGTGCTTACTTTTaGAAAGTCTTTGTCAGGGTATTATATGTAGAGAACCAAAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: AVHVEGACWLMCAYF*KVFVRVLYVENQKE Trigger: TTCTTTTTGGTTCTCTACATATAATACCCTGACAAAGACTTTTCAAAAGTAAGCACACATCAACCAGCATGCACCCTCAACATGCACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGACACCTTAGAAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTCTGCTCCCGTGGAGGTaGCTGGAGGTCTGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GRDTLEKEGGSIACHPSALLPWR*LEVCLH Trigger: ATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAG...AGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTTCTAAGGTGTCTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGTCCCGTGGAGGTGCCTaGAGGTCTGCCTGCATTCTT | + |
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Preference number: 2 (lower is better) Translates to: KRKVGALLVIPVLGRQRQSRGGA*RSACIL Trigger: AAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGA...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCATGTGCTGAAAAAGACAGGAGCTTTGACTTCTTCACAGTCACAGCATGTCTGCCTGCATTCTTaGCCTCCCTGTTGCCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LPHVLKKTGALTSSQSQHVCLHS*PPCCQL Trigger: TAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGAC...ATGCTGTGACTGTGAAGAAGTCAAAGCTCCTGTCTTTTTCAGCACATGAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | CTGATCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAACCAGACCTTGTCTCTGTaGCTTGACTATTGTGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LIDHTGWPLSSISFLLVNQTLSL*LDYCVT Trigger: GGTCACACAATAGTCAAGTCACAGAGACAAGGTCTG...GTTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGATGGCCACTTTAGTGTaGAAAATGAGCAGAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: KRKVGALLVIPVLGRQRQMATLV*KMSREK Trigger: TTTCTCTCTGCTCATTTTTCACACTAAAGTGGCCAT...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTACTTATGGAGGTCAGAGGACAACATGCAGGAGTaGGTTCTCTTTCAACCATATGGGTCTTGGGGATTGAACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: CVCVYLWRSEDNMQE*VLFQPYGSWGLNSG Trigger: ACCTGAGTTCAATCCCCAAGACCCATATGGTTGAAAGAGAACCAACTCCTGCATGTTGTCCTCTGACCTCCATAAGTACACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGATCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAACCTGCCCACTTGAATTaGCAATTTCTTTCCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: ADRSHGLAPFFYQFSSSEPAHLN*QFLSLA Trigger: AGCAAGGGAAAGAAATTGTCAATTCAAGTGGGCAGG...TTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGATCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAACATTCTCCCACTTCCTaGCCACTTGAATTGACAATT | + |
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Preference number: 2 (lower is better) Translates to: ADRSHGLAPFFYQFSSSEHSPTS*PLELTI Trigger: AATTGTCAATTCAAGTGGGCAGGAAGTGGGAGAATG...TTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | TACAGGCTACTACGGGTATTTTATCTAAGCCATAGGCAGGAAGGATGGAGCAGAGTGTGTGTGTACTTATaGAGGTCAGAGGACAACATG | + |
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Preference number: 2 (lower is better) Translates to: YRLLRVFYLSHRQEGWSRVCVYL*RSEDNM Trigger: CATGTTGTCCTCTGACCTCCATAAGTACACACACAC...TCTGCTCCATCCTTCCTGCCTATGGCTTAGATAAAATACCCGTAGTAGCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCGAACTCCACCTTCCTaGGGTACTTGTAGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: TCHCSLSITKQRPKSHTCRTPPS*GTCRVL Trigger: CAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCG...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208019.2 |
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| 3UTR CAA 90 bp | TTCAGGATATGCCAACCAGTGTGCAACTCAAGTAAATGCACGAGCTaGTGCTGTCTAAAATGTGCACAATGTGACACACACACACACCTT | + |
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Preference number: 2 (lower is better) Translates to: FRICQPVCNSSKCTS*CCLKCAQCDTHTHL Trigger: AAGGTGTGTGTGTGTGTCACATTGTGCACATTTTAGACAGCACAAGCTCGTGCATTTACTTGAGTTGCACACTGGTTGGCATATCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGATCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAAGGATTATTTATCATCTaGTCTCTGGTTTCCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ADRSHGLAPFFYQFSSSEGLFII*SLVSSS Trigger: AGAGGAGGAAACCAGAGATCAGATGATAAATAATCC...TTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CAA 90 bp | CCTGGCAAGTGTTTGGTAAGTAGTGTTCTGTTATTGTCACTGTTATaGTCACTGTTATTGTCACTGGGTGTTTTCCAAGAAGACCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGKCLVSSVLLLSLL*SLLLSLGVFQEDPG Trigger: GCCAGGGTCTTCTTGGAAAACACCCAGTGACAATAACAGTGACAATAACAGTGACAATAACAGAACACTACTTACCAAACACTTGCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCATGTGCTGAAAAAGACAGGAGCTTTGACTTCTTCACAGTCACAGCATCAAATGACACAAAGATaGAGCAAGATGGCTCACAAC | + |
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Preference number: 2 (lower is better) Translates to: LPHVLKKTGALTSSQSQHQMTQR*SKMAHN Trigger: GTTGTGAGCCATCTTGCTTCATCTTTGTGTCATTTG...ATGCTGTGACTGTGAAGAAGTCAAAGCTCCTGTCTTTTTCAGCACATGAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SNVSLFFVNNQTETKITYVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208019.2 |
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| 3UTR CAA 90 bp | ACAGAGACAGAGAGACAGACAGACAGACTAGCTCCTGGCAAGTGTTaGGTAAGTAGTGTTCTGTTATTGTCACTGTTATTGTCACTGTTA | + |
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Preference number: 2 (lower is better) Translates to: TETERQTDRLAPGKC*VSSVLLLSLLLSLL Trigger: TAACAGTGACAATAACAGTGACAATAACAGAACACTACTTACCAAACACTTGCCAGGAGCTAGTCTGTCTGTCTGTCTCTCTGTCTCTGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | CATGGTTTTCCTTTGGTGTTCATACACAACGTTCATGTGCATGTAACCTTTCACGAAGACCCTGGCTCTTaGGAACCTTTGCTTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: HGFPLVFIHNVHVHVTFHEDPGS*EPLLSF Trigger: AAATGAAAGCAAAGGTTCTCAAGAGCCAGGGTCTTC...GTGAAAGGTTACATGCACATGAACGTTGTGTATGAACACCAAAGGAAAACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTTAAAAACAAATTATTCCCAAGAACCCACATGCATTCATAACCAAAGAACTTTACAAGTGAGACTCTaGCCCCTCAGCAGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: GLKTNYSQEPTCIHNQRTLQVRL*PLSSSL Trigger: CAAGGAGCTGCTGAGGGGGCAGAGTCTCACTTGTAA...AGTTCTTTGGTTATGAATGCATGTGGGTTCTTGGGAATAATTTGTTTTTAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTTGAAGTTGTCCAAACATACCTGTGAGCTTTTCAAGAGCTGGTCAATTCATTCTTTCAGGATATaGCAACCAGTGTGCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: EALKLSKHTCELFKSWSIHSFRI*QPVCNS Trigger: TGAGTTGCACACTGGTTGGCATATCCTGAAAGAATG...AATTGACCAGCTCTTGAAAAGCTCACAGGTATGTTTGGACAACTTCAAAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCATGTGCTGAAAAAGACAGGAGCTTTGACTTCTTCACAGTCACAGCATAACTCATTCTCAAGGTaGGAGAGACACCTTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LPHVLKKTGALTSSQSQHNSFSR*ERHLRK Trigger: TTTTCTAAGGTGTCTCTCCCACCTTGAGAATGAGTT...ATGCTGTGACTGTGAAGAAGTCAAAGCTCCTGTCTTTTTCAGCACATGAGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CAA 90 bp | GACAGACTAGCTCCTGGCAAGTGTTTGGTAAGTAGTGTTCTGTTATaGTCACTGTTATTGTCACTGTTATTGTCACTGGGTGTTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: DRLAPGKCLVSSVLL*SLLLSLLLSLGVFQ Trigger: TTGGAAAACACCCAGTGACAATAACAGTGACAATAACAGTGACAATAACAGAACACTACTTACCAAACACTTGCCAGGAGCTAGTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCATGTGCTGAAAAAGACAGGAGCTTTGACTTCTTCACAGTCACAGCATTGTTTGTGTTACATGTaGATCAGACTCCATGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: LPHVLKKTGALTSSQSQHCLCYM*IRLHVN Trigger: GTTTACATGGAGTCTGATCCACATGTAACACAAACA...ATGCTGTGACTGTGAAGAAGTCAAAGCTCCTGTCTTTTTCAGCACATGAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR TCA 90 bp | TGGACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTTGGTGTTCATACACAACTCACTCATGTACCTaGATATGCATGAACATGTAT | + |
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Preference number: 2 (lower is better) Translates to: WTVFMRTTLMVFLWCSYTTHSCT*ICMNMY Trigger: ATACATGTTCATGCATATTCAGGTACATGAGTGAGT...TGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR CCA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGATGTTTTCCATTCCTTaGCTCGAAGCTTTGCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: QTCHCSLSITKQRPKSHTMFSIP*LEALLA Trigger: AGCGAGCAAAGCTTCGAGCCAAGGAATGGAAAACAT...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208019.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTTAAAAACAAATTATTCCCAAGAACCCACATGCATTCATAACCAAAGAACTAAAAGACAGGAGCTTTaGCTTCTTCACAGTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: GLKTNYSQEPTCIHNQRTKRQEL*LLHSHS Trigger: GCTGTGACTGTGAAGAAGTCAAAGCTCCTGTCTTTT...AGTTCTTTGGTTATGAATGCATGTGGGTTCTTGGGAATAATTTGTTTTTAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | CATGGTTTTCCTTTGGTGTTCATACACAACGTTCATGTGCATGTAACCTTTCACGTCTTGCCCAAAGAATaGCTTTGGAGTTTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: HGFPLVFIHNVHVHVTFHVLPKE*LWSFDF Trigger: AAAATCAAAACTCCAAAGGCATTCTTTGGGCAAGAC...GTGAAAGGTTACATGCACATGAACGTTGTGTATGAACACCAAAGGAAAACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTTAAAAACAAATTATTCCCAAGAACCCACATGCATTCATAACCAAAGAACTTTTCAGTTCATAAGCTaGTGCACACATGCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GLKTNYSQEPTCIHNQRTFQFIS*CTHASP Trigger: AGGAGAGGCATGTGTGCAGCAGCTTATGAACTGAAA...AGTTCTTTGGTTATGAATGCATGTGGGTTCTTGGGAATAATTTGTTTTTAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | GGGTTAAAAACAAATTATTCCCAAGAACCCACATGCATTCATAACCAAAGAACTTTTTATGCCAAAGTGTaGAAACATGATAGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GLKTNYSQEPTCIHNQRTFYAKV*KHDRLC Trigger: GCACAGCCTATCATGTTTGCACACTTTGGCATAAAA...AGTTCTTTGGTTATGAATGCATGTGGGTTCTTGGGAATAATTTGTTTTTAACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR-3UTR GCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACCCAAAATCACATACGTaGCTCTGTGTGAATAATCTT | + |
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Preference number: 2 (lower is better) Translates to: SNVSLFFVNNQTETKITYPKSHT*LCVNNL Trigger: AAGATTATTCACACAGAGGCACGTATGTGATTTTGG...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACACAATTTCTTTCCCTTaGTGTTTTAGCACTTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SNVSLFFVNNQTETKITYTISFP*CFSTFL Trigger: CAGAAAAGTGCTAAAACAGCAAGGGAAAGAAATTGT...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | AGGGGAGAGGGATGTGATCATCTGCTCCCGTGGAGGTaGCTGGAGGTCTGCCTGCATTCTTGGCCTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGEGCDHLLPWR*LEVCLHSWPPC Trigger: ACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGATCACATCCCTCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | ATCATCTGCTCCCGTGGAGGTGCCTGGAGGTCTGCCTaGATTCTTGGCCTCCCTGTTGCCAGCTATATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IICSRGGAWRSA*ILGLPVASYIP Trigger: GGGGATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | CTCCCGTGGAGGTGCCTGGAGGTCTGCCTGCATTCTTaGCCTCCCTGTTGCCAGCTATATCCCCATGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPWRCLEVCLHS*PPCCQLYPHEF Trigger: GAACTCATGGGGATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | TGTGATCATCTGCTCCCGTGGAGGTGCCTGGAGGTCTaGCTGCATTCTTGGCCTCCCTGTTGCCAGCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: CDHLLPWRCLEV*LHSWPPCCQLY Trigger: ATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGATCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | GATAAAAGGGGAGAGGGATGTGATCATCTGCTCCCGTaGAGGTGCCTGGAGGTCTGCCTGCATTCTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DKRGEGCDHLLP*RCLEVCLHSWP Trigger: AGGCCAAGAATGCAGGCAGACCTCCAGGCACCTCCACGGGAGCAGATGATCACATCCCTCTCCCCTTTTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | TGCCTGGAGGTCTGCCTGCATTCTTGGCCTCCCTGTTaGCAGCTATATCCCCATGAGTTCTGGATGACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CLEVCLHSWPPC*QLYPHEFWMTV Trigger: GACTGTCATCCAGAACTCATGGGGATATAGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACCTCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AAAGCCTCAGGAGTCTCACTGGGCCTAGGCTCGTCCTaGTGTTTTCCATTCCTTGGCTCGAAGCTTTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KASGVSLGLGSS*CFPFLGSKLCS Trigger: CGAGCAAAGCTTCGAGCCAAGGAATGGAAAACATCAGGACGAGCCTAGGCCCAGTGAGACTCCTGAGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208019.2 |
||
| 3UTR GCA 72 bp | GCATTGATTCCTCTTAAAGGTAAAGGGCTTCCGCTATaGACGACACCGAAAGCAGGGCTCATAGGCTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: ALIPLKGKGLPL*TTPKAGLIGWT Trigger: GGTCCAGCCTATGAGCCCTGCTTTCGGTGTCGTGCATAGCGGAAGCCCTTTACCTTTAAGAGGAATCAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAGACACCTTAGAAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTCATGCCTCTCCTGTCTaGCCCAAAGAATGCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRDTLEKEGGSIACHPSAHASPV*PKECLW Trigger: CCAAAGGCATTCTTTGGGCAAGACAGGAGAGGCATG...AGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTTCTAAGGTGTCTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTTGGTGTTCATACACAGGTCTGCCTGCATTCTaGGCCTCCCTGTTGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WTVFMRTTLMVFLWCSYTGLPAF*ASLLPA Trigger: AGCTGGCAACAGGGAGGCCAAGAATGCAGGCAGACC...TGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | GCATTCTTGGCCTCCCTGTTGCCAGCTATATCCCCATaGGTTCTGGATGACAGTCCACGAAATGTCTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AFLASLLPAISP*VLDDSPRNVSD Trigger: ATCTGAGACATTTCGTGGACTGTCATCCAGAACTCATGGGGATATAGCTGGCAACAGGGAGGCCAAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | GACAGGTTCCTTCACCTGCTGATCGATCACACGGGCTaGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: DRFLHLLIDHTG*PLSSISFLLVN Trigger: GTTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAGCAGGTGAAGGAACCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | TCTGGTTTCCTCCTCTGTAAAACTGAGGACAGTAGCTaGAGTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGFLLCKTEDSS*SQRERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCCAGCTACTGTCCTCAGTTTTACAGAGGAGGAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | TGGCCTCCCTGTTGCCAGCTATATCCCCATGAGTTCTaGATGACAGTCCACGAAATGTCTCAGATCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WPPCCQLYPHEF*MTVHEMSQILK Trigger: TTTCAAGATCTGAGACATTTCGTGGACTGTCATCCAGAACTCATGGGGATATAGCTGGCAACAGGGAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTATaGAGGTCAGAGGACAACATGCAGGAGTTGGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVYL*RSEDNMQELVL Trigger: GAGAACCAACTCCTGCATGTTGTCCTCTGACCTCCATAAGTACACACACACACACACACACACACACACACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTTGGTGTTCATACACACCCCTCAGCAGCTCCTaGACACCTAGATCTGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: WTVFMRTTLMVFLWCSYTPLSSS*TPRSAD Trigger: ATCAGCAGATCTAGGTGTCAAGGAGCTGCTGAGGGG...TGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGAGACACCTTAGAAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGTAAATGCACGAGCTaGTGCTGTCTAAAATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRDTLEKEGGSIACHPSASKCTS*CCLKCA Trigger: TGCACATTTTAGACAGCACAAGCTCGTGCATTTACT...AGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTTCTAAGGTGTCTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGATCGATCACACGGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAACAGAAGACCCTGGCTCTaGAGAACCTTTGCTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LIDHTGWPLSSISFLLVNRRPWL*RTFAFI Trigger: AATGAAAGCAAAGGTTCTCAAGAGCCAGGGTCTTCT...GTTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCCGTGTGATCGATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AGTTGGTTCTCTTTCAACCATATGGGTCTTGGGGATTaGACTCAGGTCATCAGACTTGGCGACAGGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWFSFNHMGLGD*TQVIRLGDRFL Trigger: AAGGAACCTGTCGCCAAGTCTGATGACCTGAGTTCAATCCCCAAGACCCATATGGTTGAAAGAGAACCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AGGATGGAGCAGAATGAAGGGAGTCAGGGTCATAACTaGGGGACAGCATTGATTCCTCTTAAAGGTAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RMEQNEGSQGHN*GTALIPLKGKG Trigger: CCCTTTACCTTTAAGAGGAATCAATGCTGTCCCTCAGTTATGACCCTGACTCCCTTCATTCTGCTCCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | TCTAAGGGTTTTTCAGTTCATAAGCTGCTGCACACATaGCTCTCCTGTCTTGCCCAAAGAATGCCTTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKGFSVHKLLHT*LSCLAQRMPLE Trigger: CTCCAAAGGCATTCTTTGGGCAAGACAGGAGAGGCATGTGTGCAGCAGCTTATGAACTGAAAAACCCTTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | GGTGAATGCCACCCTTATGACCATTCTTTCAGGATATaGCAACCAGTGTGCAACTCAAGTAAATGCACGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GECHPYDHSFRI*QPVCNSSKCTS Trigger: GCTCGTGCATTTACTTGAGTTGCACACTGGTTGGCATATCCTGAAAGAATGGTCATAAGGGTGGCATTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAGTCACAGGAAAGGATaGGGGAAGACAGAACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKSHRKG*GKTEPH Trigger: ATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACT...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR TCA 72 bp | AGCAAGATGGCTCACAACATGTGTAGGACATGGGCATaGCAACGTGGTATTTCCTCCTCCTTTGAACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SKMAHNMCRTWA*QRGISSSFEHD Trigger: ATCATGTTCAAAGGAGGAGGAAATACCACGTTGTCATGCCCATGTCCTACACATGTTGTGAGCCATCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | TTGTCACTGGGTGTTTTCCAAGAAGACCCTGGCTCTTaGGAACCTTTGCTTTCATTTCCTGATTGCCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLGVFQEDPGS*EPLLSFPDCPV Trigger: AACTGGGCAATCAGGAAATGAAAGCAAAGGTTCTCAAGAGCCAGGGTCTTCTTGGAAAACACCCAGTGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTACTTATGGAGGTCAGAGGACAACATaGAGGAGTTGGTTCTCTTTCAACCATATGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCTYGGQRTT*RSWFSFNHMGL Trigger: AAGACCCATATGGTTGAAAGAGAACCAACTCCTGCATGTTGTCCTCTGACCTCCATAAGTACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AAAGCCACTAATCCTATCATGAGGGATCCACCTTCATaGACTCCACTTATCCTGGATAAGAAGGCCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KATNPIMRDPPS*TPLILDKKASS Trigger: TGAACTGGCCTTCTTATCCAGGATAAGTGGAGTTCATGAAGGTGGATCCCTCATGATAGGATTAGTGGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | CAACCAGTGTGCAACTCAAGTAAATGCACGAGCTTGTaGTGTCTAAAATGTGCACAATGTGACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: QPVCNSSKCTSL*CLKCAQCDTHT Trigger: TGTGTGTGTGTCACATTGTGCACATTTTAGACAGCACAAGCTCGTGCATTTACTTGAGTTGCACACTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTAGTCACAGGAAAGGATaGGGGAAGACAGAACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: HCSLSITKQRPKSHTCLCSHRKG*GKTEPH Trigger: ATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACT...ACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCAGTCACAGGAAAGGATaGGGGAAGACAGAACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TCHCSLSITKQRPKSHTCSHRKG*GKTEPH Trigger: ATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACT...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCAGTCACAGGAAAGGATaGGGGAAGACAGAACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CHCSLSITKQRPKSHTCLSHRKG*GKTEPH Trigger: ATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACT...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTTTGAAGTTGTCCAAACATACCTGTGAGCTTTTCAAGAGCTGGTCAATTGCTCCTGGCAAGTGTTaGGTAAGTAGTGTTCTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: EALKLSKHTCELFKSWSIAPGKC*VSSVLL Trigger: TAACAGAACACTACTTACCAAACACTTGCCAGGAGC...AATTGACCAGCTCTTGAAAAGCTCACAGGTATGTTTGGACAACTTCAAAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AGAACAACTATTGTAAATGCCAATGACACTGCCCTGTaGGGGTCTGGAAACCCTCTTAGAGTTTTCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: RTTIVNANDTAL*GSGNPLRVFIQ Trigger: CTGTATGAAAACTCTAAGAGGGTTTCCAGACCCTCACAGGGCAGTGTCATTGGCATTTACAATAGTTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTAGTCACAGGAAAGGATaGGGGAAGACAGAACCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TKQRPKSHTCLCVNNLISSHRKG*GKTEPH Trigger: ATGGGGTTCTGTCTTCCCCAATCCTTTCCTGTGACT...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGCTACTACGGGTATTTTATCTAAGCCATAGGCAGGAAGGATGGAGCAGATTATTGTCACTGTTATaGTCACTGGGTGTTTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: YRLLRVFYLSHRQEGWSRLLSLL*SLGVFQ Trigger: TTGGAAAACACCCAGTGACAATAACAGTGACAATAA...TCTGCTCCATCCTTCCTGCCTATGGCTTAGATAAAATACCCGTAGTAGCCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | AAAGCACGGGAGTTATATAGACAGACCTTGTCTCTGTaGCTTGACTATTGTGTGACCGTGGTGGATTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: KARELYRQTLSL*LDYCVTVVDYL Trigger: TAAATAATCCACCACGGTCACACAATAGTCAAGTCACAGAGACAAGGTCTGTCTATATAACTCCCGTGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR TCA 72 bp | GAGAAGAGAGGCTTTGAAGTTGTCCAAACATACCTGTaGGCTTTTCAAGAGCTGGTCAATTTGTGTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: EKRGFEVVQTYL*AFQELVNLCPN Trigger: ATTTGGACACAAATTGACCAGCTCTTGAAAAGCTCACAGGTATGTTTGGACAACTTCAAAGCCTCTCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGAGTTGTGGGATTGTCTTaGGAGGGGTTTTCGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: WLLIQNKSKARTIFHALRVVGLS*EGFSSL Trigger: CAGTGACGAAAACCCCTCCAAAGACAATCCCACAAC...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACCCTTGGCTCGAAGCTTaGCTCGCTCAATTTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SNVSLFFVNNQTETKITYPWLEA*LAQFFL Trigger: CAGGAAAAATTGAGCGAGCAAAGCTTCGAGCCAAGG...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208019.2 |
||
| 3UTR TCA 72 bp | TATCAGTTTTCTTCTAGTGAACCATGTTGGAATACCTaGTGCCATGTTTGTGTTACATGTGGATCAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: YQFSSSEPCWNT*CHVCVTCGSDS Trigger: GGAGTCTGATCCACATGTAACACAAACATGGCATCAGGTATTCCAACATGGTTCACTAGAAGAAAACTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CCA 72 bp | ATGTTGGAATACCTGATGCCATGTTTGTGTTACATGTaGATCAGACTCCATGTAAACAACTCACATCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: MLEYLMPCLCYM*IRLHVNNSHQS Trigger: TGACTGATGTGAGTTGTTTACATGGAGTCTGATCCACATGTAACACAAACATGGCATCAGGTATTCCAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGACGTGTCATTGTTCTTaGTCAATAACCAAACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLFFVNNQTETKITYVPLTCHCS*SITKQR Trigger: TCTCTGTTTGGTTATTGACAAAGAACAATGACACGT...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGGTGTCAAACGTGTCATaGTTCTTTGTCAATAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLFFVNNQTETKITYVPLVSNVS*FFVNNQ Trigger: TTGGTTATTGACAAAGAACAATGACACGTTTGACAC...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| 3UTR TCA 72 bp | CTGGATAAGAAGGCCAGTTCAAGTACAGTCAACATATaGACTTGGGCACAATTTAATCCTATCCATCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: LDKKASSSTVNI*TWAQFNPIHQI Trigger: AATTTGATGGATAGGATTAAATTGTGCCCAAGTTCATATGTTGACTGTACTTGAACTGGCCTTCTTATCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR GCA 72 bp | TGTATTAGAGCTTGTATGTGTGTGTTTGTGTGTGTGTaGACGCATGTATTCCACTACTATTCTTTCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: CIRACMCVFVCV*THVFHYYSFKF Trigger: GAATTTGAAAGAATAGTAGTGGAATACATGCGTGCACACACACACAAACACACACATACAAGCTCTAATACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR-3UTR CAA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACACGTGTCATTGTTCTTaGTCAATAACCAAACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNVSLFFVNNQTETKITYTCHCS*SITKQR Trigger: TCTCTGTTTGGTTATTGACAAAGAACAATGACACGT...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000207977.2 ENSMUST00000208019.2 |
||
| 3UTR CAA 72 bp | AGGTTACAAGTGAGACTCTGCCCCCTCAGCAGCTCCTaGACACCTAGATCTGCTGATCAGGTTGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLQVRLCPLSSS*TPRSADQVALV Trigger: TACCAGGGCAACCTGATCAGCAGATCTAGGTGTCAAGGAGCTGCTGAGGGGGCAGAGTCTCACTTGTAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGGACCTGAAGATCTCTTaGCAGCCTTCTCTACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKVGALLVIPVLGRQRQDLKIS*QPSLRW Trigger: CCAGCGTAGAGAAGGCTGGCAAGAGATCTTCAGGTC...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGCTATGTCTCCTTCCTTaGCAGGGGGCAGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKVGALLVIPVLGRQRQLCLLP*QGAEHC Trigger: GCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAG...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGCCAGGTAGCCTGGTTTaGCTTTCATTGTCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKVGALLVIPVLGRQRQPGSLV*LSLSWK Trigger: TTTCCAGGACAATGAAAGTCAAACCAGGCTACCTGG...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTTGAAGTTGTCCAAACATACCTGTGAGCTTTTCAAGAGCTGGTCAATTCCACAGGGCTGGACCTaGAGATCTCTTGCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EALKLSKHTCELFKSWSIPQGWT*RSLASL Trigger: AAGGCTGGCAAGAGATCTTCAGGTCCAGCCCTGTGG...AATTGACCAGCTCTTGAAAAGCTCACAGGTATGTTTGGACAACTTCAAAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAACGTCCCCAGCCACAATaGCCCTGGCCTTGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCERPQPQ*PWPWMP Trigger: AGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACG...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | CATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTCGTCCCCAGCCACAATaGCCCTGGCCTTGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSLSITKQRPKSHTCLCRPQPQ*PWPWMP Trigger: AGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACG...ACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGTCAGGCCTGTCCAGCTaGCAGCATCCATCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKSGLSS*QHPSWP Trigger: AGGCCAAGATGGATGCTGCCAGCTGGACAGGCCTGA...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | GAGTTGGTTCTCTTTCAACCATATGGGTCTTGGGGATaGAACTCAGGTCATCAGACTTGGCGACAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ELVLFQPYGSWG*NSGHQTWRQVP Trigger: AGGAACCTGTCGCCAAGTCTGATGACCTGAGTTCAATCCCCAAGACCCATATGGTTGAAAGAGAACCAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CCA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGCGTCCCCAGCCACAATaGCCCTGGCCTTGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTCHCSLSITKQRPKSHTRPQPQ*PWPWMP Trigger: AGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACG...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTTGGTGTTCATACACACGAACTCCACCTTCCTaGGGTACTTGTAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WTVFMRTTLMVFLWCSYTRTPPS*GTCRVL Trigger: CAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCG...TGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGATCTACGCTGGCCCAGTaGTCTATCACATCACTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRSTLAQ*SITSLA Trigger: CGCTAGTGATGTGATAGATCACTGGGCCAGCGTAGA...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCACAGCATCCACTTCCTaGGCTACTTCGTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLTASTS*ATSSPA Trigger: GGCTGGGGACGAAGTAGCTCAGGAAGTGGATGCTGT...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAAGGGTCTGGGCTGCTaGTCACTGCTGTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKKGLGC*SLLFRL Trigger: TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTT...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCCCTTCATTCTCCCACTTCCTGCCCACTTGAATTGACAATTTCTTTCAAGGGTCTGGGCTGCTaGTCACTGCTGTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SFPLHSPTSCPLELTISFKGLGC*SLLFRL Trigger: TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTT...GAAAGAAATTGTCAATTCAAGTGGGCAGGAAGTGGGAGAATGAAGGGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGAATGGGGCATGGGTGGTaGCAGCCTCACCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLIQNKSKARTIFHALRMGHGW*QPHLPG Trigger: CCCAGGAAGGTGAGGCTGTCACCACCCATGCCCCAT...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCGGCCCTGGCCTTGGATaGCTGCAGCCTGTAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLGPGLG*LQPVEY Trigger: ATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCC...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGACTATGTCTCCTTCCTTaGCAGGGGGCAGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRLCLLP*QGAEHC Trigger: GCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAG...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGCCCCTTTCTTCTATCAGTTTTCTTCTAGTGAACCATGTTGGAATACCTCTGAGGATCTCATCTaGATGGTCCCAGGCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLAPFFYQFSSSEPCWNTSEDLI*MVPGMK Trigger: TTTCATGCCTGGGACCATCCAGATGAGATCCTCAGA...GGTATTCCAACATGGTTCACTAGAAGAAAACTGATAGAAGAAAGGGGCCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCCAATGGCCCTGGCCTTaGATGCCTGCAGCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLQWPWP*MPAACR Trigger: TCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTG...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | CATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTTCAGGCCTGTCCAGCTaGCAGCATCCATCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HCSLSITKQRPKSHTCLCSGLSS*QHPSWP Trigger: AGGCCAAGATGGATGCTGCCAGCTGGACAGGCCTGA...ACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGGTGGAAATTTGTAACTaGAAAGATCCTGTTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKVGALLVIPVLGRQRQVEICN*KDPVVA Trigger: TGCTACAACAGGATCTTTCCAGTTACAAATTTCCAC...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | GTGTACTTATGGAGGTCAGAGGACAACATGCAGGAGTaGGTTCTCTTTCAACCATATGGGTCTTGGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLWRSEDNMQE*VLFQPYGSWGL Trigger: CAATCCCCAAGACCCATATGGTTGAAAGAGAACCAACTCCTGCATGTTGTCCTCTGACCTCCATAAGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCCACAGGGCTGGACCTaGAGATCTCTTGCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISPQGWT*RSLASL Trigger: AAGGCTGGCAAGAGATCTTCAGGTCCAGCCCTGTGG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR TCA 90 bp | CATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCSLSITKQRPKSHTCLCVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...ACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR GCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGGGCCCTGGCCTTGGATaGCTGCAGCCTGTAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVGPGLG*LQPVEY Trigger: ATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCC...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTGGCCCTGGCCTTGGATaGCTGCAGCCTGTAGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISGPGLG*LQPVEY Trigger: ATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCC...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCAATGGCCCTGGCCTTaGATGCCTGCAGCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISQWPWP*MPAACR Trigger: TCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCCGAACTCCACCTTCCTaGGGTACTTGTAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLRTPPS*GTCRVL Trigger: CAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCG...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAACGAACTCCACCTTCCTaGGGTACTTGTAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCERTPPS*GTCRVL Trigger: CAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCG...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTCTACGCTGGCCCAGTaGTCTATCACATCACTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLSTLAQ*SITSLA Trigger: CGCTAGTGATGTGATAGATCACTGGGCCAGCGTAGA...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTAGTGTCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCACAGCATCCACTTCCTaGGCTACTTCGTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLVSNVSLFFVNNQTETTASTS*ATSSPA Trigger: GGCTGGGGACGAAGTAGCTCAGGAAGTGGATGCTGT...GGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGACACTAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084647.13 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACACAGCATCCACTTCCTaGGCTACTTCGTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SNVSLFFVNNQTETKITYTASTS*ATSSPA Trigger: GGCTGGGGACGAAGTAGCTCAGGAAGTGGATGCTGT...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTAAGGGTCTGGGCTGCTaGTCACTGCTGTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPKGLGC*SLLFRL Trigger: TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTT...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTATGTCTCCTTCCTTaGCAGGGGGCAGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCLCLLP*QGAEHC Trigger: GCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAG...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGATGGCCGTTTGTTTACTaGCTTCACTCAGTTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRWPFVY*LHSVLG Trigger: TCCGAGAACTGAGTGAAGCCAGTAAACAAACGGCCA...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGACTCCCGAGAGAACATTaGCCGTTTGTTTACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRLPREH*PFVYWL Trigger: AAGCCAGTAAACAAACGGCCAATGTTCTCTCGGGAG...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATACAATGGCCCTGGCCTTaGATGCCTGCAGCCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITKQRPKSHTCLCVNNLIQWPWP*MPAACR Trigger: TCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTG...TATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTAGTGTCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCTCAGGCCTGTCCAGCTaGCAGCATCCATCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLVSNVSLFFVNNQTETSGLSS*QHPSWP Trigger: AGGCCAAGATGGATGCTGCCAGCTGGACAGGCCTGA...GGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGACACTAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084647.13 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGCATTCCCCCAGAGAGTaGAAAGTCTTGGAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKHSPRE*KVLEFS Trigger: GGAAAATTCCAAGACTTTTCACTCTCTGGGGGAATG...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGAAGGGTCTGGGCTGCTaGTCACTGCTGTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVKGLGC*SLLFRL Trigger: TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTT...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGAGTAGGGTGCTGTCACTaGCTTCACGTGCTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLLIQNKSKARTIFHALRVGCCH*LHVLLK Trigger: CTTCAGGAGCACGTGAAGTCAGTGACAGCACCCTAC...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
||
| CDS-3UTR GCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGGACCTGAAGATCTCTTaGCAGCCTTCTCTACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVDLKIS*QPSLRW Trigger: CCAGCGTAGAGAAGGCTGGCAAGAGATCTTCAGGTC...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTGACCTGAAGATCTCTTaGCAGCCTTCTCTACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISDLKIS*QPSLRW Trigger: CCAGCGTAGAGAAGGCTGGCAAGAGATCTTCAGGTC...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGTTATTTCTTTCCCACTaGCATTCATCCACCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKLFLSH*HSSTTG Trigger: CCCTGTGGTGGATGAATGGCAGTGGGAAAGAAATAA...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | CATGGTTTTCCTTTGGTGTTCATACACAACGTTCATGTGCATGTAACCTTTCACGGCAGAACATTGCCCTaGTCATCTATGACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HGFPLVFIHNVHVHVTFHGRTLP*SSMTCT Trigger: TGTACAGGTCATAGATGAGCAGGGCAATGTTCTGCC...GTGAAAGGTTACATGCACATGAACGTTGTGTATGAACACCAAAGGAAAACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCTATGTCTCCTTCCTTaGCAGGGGGCAGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISLCLLP*QGAEHC Trigger: GCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGTGTTCCCAGGTAGCCTaGTTTGACTTTCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKCSQVA*FDFHCP Trigger: AGGACAATGAAAGTCAAACCAGGCTACCTGGGAACA...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACCGAACTCCACCTTCCTaGGGTACTTGTAGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNVSLFFVNNQTETKITYRTPPS*GTCRVL Trigger: CAGCACCCTACAAGTACCCCAGGAAGGTGGAGTTCG...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAATGTTTTCCATTCCTTaGCTCGAAGCTTTGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRMFSIP*LEALLA Trigger: AGCGAGCAAAGCTTCGAGCCAAGGAATGGAAAACAT...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGAAAAGCACATGGGGCATaGGTGGTGACAGCCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WLLIQNKSKARTIFHALRKAHGA*VVTASP Trigger: AGGTGAGGCTGTCACCACCCATGCCCCATGTGCTTT...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
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| 3UTR CAA 72 bp | CAGTTCATAAGCTGCTGCACACATGCCTCTCCTGTCTaGCCCAAAGAATGCCTTTGGAGTTTTGATTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QFISCCTHASPV*PKECLWSFDFK Trigger: TTTAAAATCAAAACTCCAAAGGCATTCTTTGGGCAAGACAGGAGAGGCATGTGTGCAGCAGCTTATGAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | GAGAGACAGACAGACAGACTAGCTCCTGGCAAGTGTTaGGTAAGTAGTGTTCTGTTATTGTCACTGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: ERQTDRLAPGKC*VSSVLLLSLLL Trigger: CAATAACAGTGACAATAACAGAACACTACTTACCAAACACTTGCCAGGAGCTAGTCTGTCTGTCTGTCTCTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CAA 72 bp | GACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTaGGTGTTCATACACAACGTTCATGTGCATGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: DSVHENDTHGFP*VFIHNVHVHVT Trigger: GGTTACATGCACATGAACGTTGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGCTTTTAGCAATGCCTTaGAGTTTAGCCATCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKLLAMP*SLAILL Trigger: GAGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAG...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAACCAGGTAGCCTGGTTTaGCTTTCATTGTCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCEPGSLV*LSLSWK Trigger: TTTCCAGGACAATGAAAGTCAAACCAGGCTACCTGG...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGAAAGGGTCTGGGCTGCTaGTCACTGCTGTTTCGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WLLIQNKSKARTIFHALRKGLGC*SLLFRL Trigger: TAAGCGAAACAGCAGTGATCAGCAGCCCAGACCCTT...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
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| CDS-3UTR GCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCGGCAGAACATTGCCCTaGTCATCTATGACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLGRTLP*SSMTCT Trigger: TGTACAGGTCATAGATGAGCAGGGCAATGTTCTGCC...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTGGCAGAACATTGCCCTaGTCATCTATGACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPGRTLP*SSMTCT Trigger: TGTACAGGTCATAGATGAGCAGGGCAATGTTCTGCC...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR GCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACCTATGTCTCCTTCCTTaGCAGGGGGCAGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNVSLFFVNNQTETKITYLCLLP*QGAEHC Trigger: GCAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAG...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000208019.2 |
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| CDS-3UTR GCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGTTCACCACGGCAGGATaGTCCATCAGTGCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVFTTAG*SISAFS Trigger: GGAAAATGCACTGATGGAGCATCCTGCCGTGGTGAA...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207977.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAACTCCCGAGAGAACATTaGCCGTTTGTTTACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCELPREH*PFVYWL Trigger: AAGCCAGTAAACAAACGGCCAATGTTCTCTCGGGAG...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS-3UTR CCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTTCTGAGGATCTCATCTaGATGGTCCCAGGCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPSEDLI*MVPGMK Trigger: TTTCATGCCTGGGACCATCCAGATGAGATCCTCAGA...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS-3UTR CCA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGATCTTCTGAAAGCACATaGGGCATGGGTGGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLIQNKSKARTIFHALRSSEST*GMGGDS Trigger: GCTGTCACCACCCATGCCCCATGTGCTTTCAGAAGA...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
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| 3UTR CAA 72 bp | TTTCCCCTTCATTCTCCCACTTCCTGCCCACTTGAATaGACAATTTCTTTCCCTTGCTGTTTTAGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLHSPTSCPLE*TISFPCCFSTF Trigger: AAAAGTGCTAAAACAGCAAGGGAAAGAAATTGTCAATTCAAGTGGGCAGGAAGTGGGAGAATGAAGGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| 3UTR CAA 72 bp | GCTCCTGGCAAGTGTTTGGTAAGTAGTGTTCTGTTATaGTCACTGTTATTGTCACTGTTATTGTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: APGKCLVSSVLL*SLLLSLLLSLG Trigger: ACCCAGTGACAATAACAGTGACAATAACAGTGACAATAACAGAACACTACTTACCAAACACTTGCCAGGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | ACATTCCATGAGTTCTTAAGCAGTTTGCTGTTCCGCTaGCATGGGCGTCAACAGAATGAATTCTTTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFHEFLSSLLFR*HGRQQNEFFLN Trigger: ATTGAGAAAGAATTCATTCTGTTGACGCCCATGCAAGCGGAACAGCAAACTGCTTAAGAACTCATGGAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCCATTCCCCCAGAGAGTaGAAAGTCTTGGAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLHSPRE*KVLEFS Trigger: GGAAAATTCCAAGACTTTTCACTCTCTGGGGGAATG...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGCATTCCCCCAGAGAGTaGAAAGTCTTGGAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLFFVNNQTETKITYVPLHSPRE*KVLEFS Trigger: GGAAAATTCCAAGACTTTTCACTCTCTGGGGGAATG...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCCAGGTAGCCTGGTTTaGCTTTCATTGTCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISPGSLV*LSLSWK Trigger: TTTCCAGGACAATGAAAGTCAAACCAGGCTACCTGG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAAAAGATGGACAAATATaGATGCTCCCAATACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRKDGQI*MLPIPK Trigger: CTTGGGTATTGGGAGCATGCATATTTGTCCATCTTT...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTGGCAGAACATTGCCCTaGTCATCTATGACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISGRTLP*SSMTCT Trigger: TGTACAGGTCATAGATGAGCAGGGCAATGTTCTGCC...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR GCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGGGCAGAACATTGCCCTaGTCATCTATGACCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVGRTLP*SSMTCT Trigger: TGTACAGGTCATAGATGAGCAGGGCAATGTTCTGCC...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR GCA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGAGTACCTGCAAAAGTATaGCCCACTGGAATTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYISISGDEEVTGKDWGRVPAKV*PTGIND Trigger: ATCATTAATTCCAGTGGGGCATACTTTTGCAGGTAC...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084647.13 |
||
| CDS-3UTR CCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGTGGCCGTTTGTTTACTaGCTTCACTCAGTTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVWPFVY*LHSVLG Trigger: TCCGAGAACTGAGTGAAGCCAGTAAACAAACGGCCA...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTCTGAGGATCTCATCTaGATGGTCCCAGGCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QTCHCSLSITKQRPKSHTSEDLI*MVPGMK Trigger: TTTCATGCCTGGGACCATCCAGATGAGATCCTCAGA...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTGTTCATGAGAACGACACTCATGGTTTTCCTTTGGTGTTCATACACAGCAGCTATGCAGATGTaGAAATTTGTAACTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WTVFMRTTLMVFLWCSYTAAMQM*KFVTGK Trigger: CTTTCCAGTTACAAATTTCCACATCTGCATAGCTGC...TGTGTATGAACACCAAAGGAAAACCATGAGTGTCGTTCTCATGAACACTGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATGTTCCCAGGTAGCCTaGTTTGACTTTCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCECSQVA*FDFHCP Trigger: AGGACAATGAAAGTCAAACCAGGCTACCTGGGAACA...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCTGTTCCCAGGTAGCCTaGTTTGACTTTCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCCSQVA*FDFHCP Trigger: AGGACAATGAAAGTCAAACCAGGCTACCTGGGAACA...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTATGTTTTCCATTCCTTaGCTCGAAGCTTTGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPMFSIP*LEALLA Trigger: AGCGAGCAAAGCTTCGAGCCAAGGAATGGAAAACAT...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTGTGGAAATACCCTTCTaGATCCCTGATAGCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPVEIPF*IPDSYV Trigger: GACATAGCTATCAGGGATCCAGAAGGGTATTTCCAC...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129766.9 |
||
| CDS-3UTR TCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTTTTAGCAATGCCTTaGAGTTTAGCCATCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPLLAMP*SLAILL Trigger: GAGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAG...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGTTATTTCTTTCCCACTaGCATTCATCCACCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVLFLSH*HSSTTG Trigger: CCCTGTGGTGGATGAATGGCAGTGGGAAAGAAATAA...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTAGTGTCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCCTCCCGAGAGAACATTaGCCGTTTGTTTACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLVSNVSLFFVNNQTETLPREH*PFVYWL Trigger: AAGCCAGTAAACAAACGGCCAATGTTCTCTCGGGAG...GGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGACACTAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084647.13 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | AACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGATGTTTTCCATTCCTTaGCTCGAAGCTTTGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVSLFFVNNQTETKITYVMFSIP*LEALLA Trigger: AGCGAGCAAAGCTTCGAGCCAAGGAATGGAAAACAT...CACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCAGACACCAGCAACTTaGTTTTCAGAAAAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISQTPAT*FSEKSS Trigger: ACTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCAAAGATGGACAAATATaGATGCTCCCAATACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLKDGQI*MLPIPK Trigger: CTTGGGTATTGGGAGCATGCATATTTGTCCATCTTT...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR GCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCAAAGATGGACAAATATaGATGCTCCCAATACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCKDGQI*MLPIPK Trigger: CTTGGGTATTGGGAGCATGCATATTTGTCCATCTTT...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCGCAGCTATGCAGATGTaGAAATTTGTAACTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCAAMQM*KFVTGK Trigger: CTTTCCAGTTACAAATTTCCACATCTGCATAGCTGC...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | CATCAGTCAATCAGATTTTGTCTTTTTAGAATTAAGTaGGTGACCCTGAAGGTGGAAGGTAACAGTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQSIRFCLFRIK*VTLKVEGNSVR Trigger: TCTGACACTGTTACCTTCCACCTTCAGGGTCACCAACTTAATTCTAAAAAGACAAAATCTGATTGACTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | CACTCGGTTATCAAACTTTCTAACGCCTTTCTAAACTaGACATTGCTCCTCAAGATTTGCTACATCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HSVIKLSNAFLN*TLLLKICYIKT Trigger: GGTTTTGATGTAGCAAATCTTGAGGAGCAATGTCAAGTTTAGAAAGGCGTTAGAAAGTTTGATAACCGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATACAGACACCAGCAACTTaGTTTTCAGAAAAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITKQRPKSHTCLCVNNLIQTPAT*FSEKSS Trigger: ACTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTG...TATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR TCA 90 bp | ATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATACTTTTAGCAATGCCTTaGAGTTTAGCCATCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITKQRPKSHTCLCVNNLILLAMP*SLAILL Trigger: GAGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAG...TATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGGTGGAAATTTGTAACTaGAAAGATCCTGTTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFFVNNQTETKITYVPLVEICN*KDPVVA Trigger: TGCTACAACAGGATCTTTCCAGTTACAAATTTCCAC...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTGCAGCTATGCAGATGTaGAAATTTGTAACTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQRPKSHTCLCVNNLISAAMQM*KFVTGK Trigger: CTTTCCAGTTACAAATTTCCACATCTGCATAGCTGC...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| 3UTR CAA 72 bp | GTTATCAAACTTTCTAACGCCTTTCTAAACTTGACATaGCTCCTCAAGATTTGCTACATCAAAACCACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIKLSNAFLNLT*LLKICYIKTTS Trigger: GCTAGTGGTTTTGATGTAGCAAATCTTGAGGAGCAATGTCAAGTTTAGAAAGGCGTTAGAAAGTTTGATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTTTCTTGATATTCATATaGAAAGTACGGCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFFVNNQTETKITYVPFLIFI*KVRQEI Trigger: GATTTCCTGCCGTACTTTCCATATGAATATCAAGAA...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATTCTTGATATTCATATaGAAAGTACGGCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FFVNNQTETKITYVPLCEFLIFI*KVRQEI Trigger: GATTTCCTGCCGTACTTTCCATATGAATATCAAGAA...TTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCTTCTTGATATTCATATaGAAAGTACGGCAGGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TCHCSLSITKQRPKSHTCFLIFI*KVRQEI Trigger: GATTTCCTGCCGTACTTTCCATATGAATATCAAGAA...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CCA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCGCAGCTATGCAGATGTaGAAATTTGTAACTAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHCSLSITKQRPKSHTCLAAMQM*KFVTKE Trigger: TTCTTTAGTTACAAATTTCCACATCTGCATAGCTGC...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129766.9 |
||
| CDS-3UTR CCA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGGAAATTTGTAACTaGAAAGATCCTGTTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNVSLFFVNNQTETKITYVEICN*KDPVVA Trigger: TGCTACAACAGGATCTTTCCAGTTACAAATTTCCAC...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| 3UTR CAA 72 bp | TGTTTGGTAAGTAGTGTTCTGTTATTGTCACTGTTATaGTCACTGTTATTGTCACTGGGTGTTTTCCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLVSSVLLLSLL*SLLLSLGVFQE Trigger: TTCTTGGAAAACACCCAGTGACAATAACAGTGACAATAACAGTGACAATAACAGAACACTACTTACCAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| CDS-3UTR CAA 90 bp | AAAAGGAAGGTGGGAGCATTGCTTGTCATCCCAGTGCTAGGGAGGCAGAGACAGGCTATGTCTCCTTCCTaGCCAGGGGGCAGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: KRKVGALLVIPVLGRQRQAMSPS*PGGRTL Trigger: CAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGC...CTGTCTCTGCCTCCCTAGCACTGGGATGACAAGCAATGCTCCCACCTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| CDS-3UTR CAA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGACCAGGGGGCAGAACATaGCCCTGCTCATCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SYISISGDEEVTGKDWGRPGGRT*PCSSMT Trigger: GGTCATAGATGAGCAGGGCAATGTTCTGCCCCCTGG...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
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| CDS-3UTR CAA 90 bp | ATCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGGCTATGTCTCCTTCCTaGCCAGGGGGCAGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: ILYLHKWRRRSHRKGLGKAMSPS*PGGRTL Trigger: CAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGC...CTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | TACAGGCTACTACGGGTATTTTATCTAAGCCATAGGCAGGAAGGATGGAGCAGACCTTGGCTCGAAGCTTaGCTCGCTCAATTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YRLLRVFYLSHRQEGWSRPWLEA*LAQFFL Trigger: CAGGAAAAATTGAGCGAGCAAAGCTTCGAGCCAAGG...TCTGCTCCATCCTTCCTGCCTATGGCTTAGATAAAATACCCGTAGTAGCCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
||
| CDS-3UTR CAA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCCAGGGGGCAGAACATaGCCCTGCTCATCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: VSLFFVNNQTETKITYVPPGGRT*PCSSMT Trigger: GGTCATAGATGAGCAGGGCAATGTTCTGCCCCCTGG...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
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| CDS-3UTR CAA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTCCAGGGGGCAGAACATaGCCCTGCTCATCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: TKQRPKSHTCLCVNNLISPGGRT*PCSSMT Trigger: GGTCATAGATGAGCAGGGCAATGTTCTGCCCCCTGG...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGCCAGGGGGCAGAACATaGCCCTGCTCATCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: QTCHCSLSITKQRPKSHTPGGRT*PCSSMT Trigger: GGTCATAGATGAGCAGGGCAATGTTCTGCCCCCTGG...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCGCTATGTCTCCTTCCTaGCCAGGGGGCAGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: CHCSLSITKQRPKSHTCLAMSPS*PGGRTL Trigger: CAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGC...GAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | ACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCGCTATGTCTCCTTCCTaGCCAGGGGGCAGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TCHCSLSITKQRPKSHTCAMSPS*PGGRTL Trigger: CAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGC...GCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | TCTTATATCTCCATAAGTGGAGACGAAGAAGTCACAGGAAAGGATTGGGGAAGACCTTGGCTCGAAGCTTaGCTCGCTCAATTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SYISISGDEEVTGKDWGRPWLEA*LAQFFL Trigger: CAGGAAAAATTGAGCGAGCAAAGCTTCGAGCCAAGG...TCTTCCCCAATCCTTTCCTGTGACTTCTTCGTCTCCACTTATGGAGATATAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CAA 90 bp | ATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATACCAGGGGGCAGAACATaGCCCTGCTCATCTATGACC | + |
|
Preference number: 5 (lower is better) Translates to: ITKQRPKSHTCLCVNNLIPGGRT*PCSSMT Trigger: GGTCATAGATGAGCAGGGCAATGTTCTGCCCCCTGG...TATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGAATAATCTTATATCTGCTATGTCTCCTTCCTaGCCAGGGGGCAGAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TKQRPKSHTCLCVNNLISAMSPS*PGGRTL Trigger: CAATGTTCTGCCCCCTGGCAAGGAAGGAGACATAGC...AGATATAAGATTATTCACACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGCCTTGGCTCGAAGCTTaGCTCGCTCAATTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLFFVNNQTETKITYVPLPWLEA*LAQFFL Trigger: CAGGAAAAATTGAGCGAGCAAAGCTTCGAGCCAAGG...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000129766.9 ENSMUST00000167935.10 ENSMUST00000207977.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTTGTGTCTTCTTGGGATaGTCCACATATCCAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSLFFVNNQTETKITYVPCVFLG*STYPEN Trigger: GTTCTCTGGATATGTGGACAATCCCAAGAAGACACA...AGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTGTGTCTTCTTGGGATaGTCCACATATCCAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLFFVNNQTETKITYVPLCVFLG*STYPEN Trigger: GTTCTCTGGATATGTGGACAATCCCAAGAAGACACA...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | CATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTTCAGACACCAGCAACTaGATTTTCAGAAAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HCSLSITKQRPKSHTCLCSDTSN*IFRKEQ Trigger: CTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTGA...ACAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CAA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGTGTCTTCTTGGGATaGTCCACATATCCAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QTCHCSLSITKQRPKSHTCVFLG*STYPEN Trigger: GTTCTCTGGATATGTGGACAATCCCAAGAAGACACA...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 ENSMUST00000208019.2 |
||
| CDS-3UTR CAA 90 bp | CAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTCAGACACCAGCAACTaGATTTTCAGAAAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTCHCSLSITKQRPKSHTSDTSN*IFRKEQ Trigger: CTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTGA...CGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
||
| CDS-3UTR CAA 90 bp | TCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACGTGCCTCTGTCTTTTAGCAATGCCTaGAAGTTTAGCCATCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SLFFVNNQTETKITYVPLSFSNA*KFSHPS Trigger: AGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAGA...CAGAGGCACGTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS-3UTR CAA 90 bp | TGGCTTTTAATTCAGAATAAATCAAAGGCTAGGACCATTTTTCATGCACTGAGATGTGTCTTCTTGGGATaGTCCACATATCCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: WLLIQNKSKARTIFHALRCVFLG*STYPEN Trigger: GTTCTCTGGATATGTGGACAATCCCAAGAAGACACA...TCTCAGTGCATGAAAAATGGTCCTAGCCTTTGATTTATTCTGAATTAAAAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123638.2 |
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| CDS-3UTR CAA 90 bp | GGGTTAAAAACAAATTATTCCCAAGAACCCACATGCATTCATAACCAAAGAACTTGTGTCTTCTTGGGATaGTCCACATATCCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: GLKTNYSQEPTCIHNQRTCVFLG*STYPEN Trigger: GTTCTCTGGATATGTGGACAATCCCAAGAAGACACA...AGTTCTTTGGTTATGAATGCATGTGGGTTCTTGGGAATAATTTGTTTTTAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167935.10 |
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| CDS-3UTR CAA 90 bp | TTTCTTTTAGTGTCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCTCAGACACCAGCAACTaGATTTTCAGAAAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FLLVSNVSLFFVNNQTETSDTSN*IFRKEQ Trigger: CTGCTCTTTTCTGAAAATCAAGTTGCTGGTGTCTGA...GGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGACACTAAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084647.13 ENSMUST00000167935.10 |
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| CDS-3UTR CAA 90 bp | TCAAACGTGTCATTGTTCTTTGTCAATAACCAAACAGAGACCAAAATCACATACTCTTTTAGCAATGCCTaGAAGTTTAGCCATCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SNVSLFFVNNQTETKITYSFSNA*KFSHPS Trigger: AGAAGGATGGCTAAACTTCAAGGCATTGCTAAAAGA...GTATGTGATTTTGGTCTCTGTTTGGTTATTGACAAAGAACAATGACACGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS CCA 72 bp | GAGCTACTTCGTCCCCAGCCACAATGGCCCTGGCCTTaGATGCCTGCAGCCTGTAGAGTATGTCTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: ELLRPQPQWPWP*MPAACRVCLRI Trigger: GATCCTCAGACATACTCTACAGGCTGCAGGCATCCAAGGCCAGGGCCATTGTGGCTGGGGACGAAGTAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS TCA 72 bp | TCTCCAGAGTCTCTGGGAGAAGGGTCTCTCCTCCACTaGAGCAGCTATGCAGATGTGGAAATTTGTAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SPESLGEGSLLH*SSYADVEICNW Trigger: CCAGTTACAAATTTCCACATCTGCATAGCTGCTTCAGTGGAGGAGAGACCCTTCTCCCAGAGACTCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS CCA 72 bp | ATAGTCAGAGAAGCTGTGGTCCATTTAATCCAACGATaGCTGCCTACGAATGGAAGGTCCAAGGATCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: IVREAVVHLIQR*LPTNGRSKDPV Trigger: TACTGGATCCTTGGACCTTCCATTCGTAGGCAGCCATCGTTGGATTAAATGGACCACAGCTTCTCTGACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098084.11 |
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| CDS CAA 72 bp | AAGTCTCCTCGAATATTATCCTGTGTCTTCTTGGGATaGTCCACATATCCAGAGAACATGCCGATAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KSPRILSCVFLG*STYPENMPIGQ Trigger: CTGGCCTATCGGCATGTTCTCTGGATATGTGGACAATCCCAAGAAGACACAGGATAATATTCGAGGAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000123638.2 ENSMUST00000167935.10 ENSMUST00000208019.2 |
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| CDS CCA 72 bp | CCCCACTGTATGGGTATTAGTTTCTTGATATTCATATaGAAAGTACGGCAGGAAATCTCATTCCCCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PHCMGISFLIFI*KVRQEISFPQR Trigger: TCTCTGGGGGAATGAGATTTCCTGCCGTACTTTCCATATGAATATCAAGAAACTAATACCCATACAGTGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000130583.2 ENSMUST00000167935.10 |
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| CDS CAA 90 bp | TGGGATAGCTGGAAAGCACCTTTAGAACAGTTTGTGAATCAAACTTaGGCAAAAGATGGACAAATATGCATGCTCCCAATACCCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: WDSWKAPLEQFVNQT*AKDGQICMLPIPKV Trigger: AACCTTGGGTATTGGGAGCATGCATATTTGTCCATCTTTTGCCAAAGTTTGATTCACAAACTGTTCTAAAGGTGCTTTCCAGCTATCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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| CDS CAA 72 bp | TGGAAAGCACCTTTAGAACAGTTTGTGAATCAAACTTaGGCAAAAGATGGACAAATATGCATGCTCCCAATA | + |
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Preference number: 6 (lower is better) Translates to: WKAPLEQFVNQT*AKDGQICMLPI Trigger: TATTGGGAGCATGCATATTTGTCCATCTTTTGCCAAAGTTTGATTCACAAACTGTTCTAAAGGTGCTTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084647.13 ENSMUST00000098084.11 ENSMUST00000167935.10 |
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