Pregenerated sensors for ACSM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033533Ensembl transcript IDs: ENSMUST00000047929.13, ENSMUST00000126367.8, ENSMUST00000135683.3
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTaGCCCCAACAGCCAAGGATTCAGGTCACAGGATGCTCTGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: STFTLPAFHRHPTPP*PQQPRIQVTGCSGL Trigger: CAACCCAGAGCATCCTGTGACCTGAATCCTTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAGTCTGAGAGTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGCATCCCACACCACCCTaGCCCCAACAGCCAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: TNSLRVHCGRGRRRYPGRHPTPP*PQQPRI Trigger: AATCCTTGGCTGTTGGGGTCAGGGTGGTGTGGGATG...CCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCACTCTCAGACTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGCACATTTACCCTTCCTaGATTCCATCGTCATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IQVSIFIVHKQSESALWKHIYPS*IPSSSH Trigger: GTGGGATGACGATGGAATGCAGGAAGGGTAAATGTG...CTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| 3UTR TCA 72 bp | ACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTaGCCCCAACAGCCAAGGATTCAGGTCACAGGATGC | + |
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Preference number: 3 (lower is better) Translates to: TLPAFHRHPTPP*PQQPRIQVTGC Trigger: GCATCCTGTGACCTGAATCCTTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | CCATCGTCATCCCACACCACCCTGACCCCAACAGCCAAGGATTCAGGTCACAGGAGAATCAAGGCCAGGTaGTCTCCTTGCTGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSSHTTLTPTAKDSGHRRIKAR*SPCCRP Trigger: TGGCCTGCAGCAAGGAGATCACCTGGCCTTGATTCT...CCTGTGACCTGAATCCTTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | TGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGCGCAGACTCTGCCACTaGTGGGTGCTCCGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: CTVEGEEEGIQEGDQLSLRRLCH*WVLRQG Trigger: GCCTTGGCGGAGCACCCAGCAGTGGCAGAGTCTGCG...CAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | CCATCGTCATCCCACACCACCCTGACCCCAACAGCCAAGGATTCAGGTCACAGGGACTTGGTCCTCTCTTaGCCTCCTCCTCCATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PSSSHTTLTPTAKDSGHRDLVLS*PPPPFE Trigger: CTCAAATGGAGGAGGAGGGCAAGAGAGGACCAAGTC...CCTGTGACCTGAATCCTTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | ACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGGGAGGGTGGCACTGCTaGTCCCCGTTTCTGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TVEGEEEGIQEGDQLSLKGGWHC*SPFLTV Trigger: GACAGTCAGAAACGGGGATCAGCAGTGCCACCCTCC...CTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | ACAAACAGTCTGAGAGTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGTCTGTGCAGCTGGGTaGGGCTTAGGGAGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TNSLRVHCGRGRRRYPGRVCAAG*GLGRSP Trigger: AGGGCTTCTCCCTAAGCCCCACCCAGCTGCACAGAC...CCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCACTCTCAGACTGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | TGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAACCGTCTGTGCAGCTaGGTGGGGCTTAGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CTVEGEEEGIQEGDQLSLNRLCS*VGLREK Trigger: CTTCTCCCTAAGCCCCACCCAGCTGCACAGACGGTT...CAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | TTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTGACCCCAACAGCCAATGGAGCTCCAACTCTTaGAAACAACCGTCTGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPFLHSIVIPHHPDPNSQWSSNS*KQPSVQ Trigger: CTGCACAGACGGTTGTTTTCAAGAGTTGGAGCTCCA...TTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | TTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTGACCCCAACAGCCAAGGTCCCTCAGCTTCCTaGAGCTCCACTTTATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LPFLHSIVIPHHPDPNSQGPSAS*SSTLFH Trigger: ATGAAATAAAGTGGAGCTTCAGGAAGCTGAGGGACC...TTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | TGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGCTGTTCCTGATCGTGTaGCAGGAACTCTGGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: CTVEGEEEGIQEGDQLSLLFLIV*QELWVE Trigger: CTCAACCCAGAGTTCCTGTCACACGATCAGGAACAG...CAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | GGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAAGACTCTGCCACTGCTaGGTGCTCCGCCAAGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GEEEGIQEGDQLSLKKAKRLCHC*VLRQGV Trigger: AACGCCTTGGCGGAGCACCCAGCAGTGGCAGAGTCT...TTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | GTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTAATCCATCCTGGGTCTaGCATGCACCACAAGATGTC | + |
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Preference number: 4 (lower is better) Translates to: VHCGRGRRRYPGRGPTEFNPSWV*HAPQDV Trigger: GACATCTTGTGGTGCATGTCAGACCCAGGATGGATT...AAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | ACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGACTTTGGGGTCGAATTaGGGGAGGTGGTGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVEGEEEGIQEGDQLSLKTLGSN*GRWWMK Trigger: CTTCATCCACCACCTCCCTCAATTCGACCCCAAAGT...CTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | TTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTGACCCCAACAGCCAAACAGTACCTCTACAATaGCTTTGGGGTCGAATTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPFLHSIVIPHHPDPNSQTVPLQ*LWGRIE Trigger: CTCAATTCGACCCCAAAGTCATTGTAGAGGTACTGT...TTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | TTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTCAAGGGTGGGGAACCTaGGGTTGGAGGTTTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FSLPHLPFLHSIVIPHHPQGWGT*GWRFSA Trigger: AGCAGAAAACCTCCAACCTCAGGTTCCCCACCCTTG...AGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | GGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAGGGGCAGCAAGGCACTaGGTGATGGGGTATTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GEEEGIQEGDQLSLKKAKGAARH*VMGYLN Trigger: GTTCAAATACCCCATCACTCAGTGCCTTGCTGCCCC...TTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | ACAAACAGTCTGAGAGTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGTGCAGGCCACAAATCTaGTCAAAGACGTTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: TNSLRVHCGRGRRRYPGRCRPQI*SKTLAV Trigger: CACTGCCAACGTCTTTGAGCAGATTTGTGGCCTGCA...CCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCACTCTCAGACTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | GGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAACCACCAGTAGTGCAATaGTCAAGGGTGGGGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: GEEEGIQEGDQLSLKKAKPPVVQ*SRVGNL Trigger: CAGGTTCCCCACCCTTGAGCATTGCACTACTGGTGG...TTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | GTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTCAGACACCACCAGCTTaGTTTTCAGATCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: VHCGRGRRRYPGRGPTEFQTPPA*FSDQDT Trigger: AGTGTCCTGATCTGAAAACCAAGCTGGTGGTGTCTG...AAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | TCTTGGTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACGTCCTTTGCTTCCACTaGTCATACTCCTCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SWFSLPHLPFLHSIVIPHVLCFH*SYSSGS Trigger: GCTGCCTGAGGAGTATGAGCAGTGGAAGCAAAGGAC...GTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | CAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGGGGGAGGGAGGTGGTGGATaGAGACTGTACATCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: QVSIFIVHKQSESALWKGEGGGG*RLYILM Trigger: CATCAGGATGTACAGTCTTCATCCACCACCTCCCTC...CCCCTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | GTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTTGGAGGTTTTCTGCTaGAGAACCATTCGATACACG | + |
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Preference number: 4 (lower is better) Translates to: VFSSTFTLPAFHRHPTPPLEVFC*RTIRYT Trigger: CGTGTATCGAATGGTTCTTCAGCAGAAAACCTCCAA...GGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | ACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGACTCCACTTCAGATGTaGTCTCTGGGCTATTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TVEGEEEGIQEGDQLSLKTPLQM*SLGYSH Trigger: ATGAGAATAGCCCAGAGAGCACATCTGAAGTGGAGT...CTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | TTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCTGACCCCAACAGCCAAGACTTAATACAAGTATaGTCTGGGGATGCTGATTTA | + |
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Preference number: 4 (lower is better) Translates to: LPFLHSIVIPHHPDPNSQDLIQV*SGDADL Trigger: TAAATCAGCATCCCCAGACCATACTTGTATTAAGTC...TTGGCTGTTGGGGTCAGGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | CAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGGGGCAAACTCCACCTTCCTaGGGTACTTGTATGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QVSIFIVHKQSESALWKGQTPPS*GTCMVP Trigger: CGGCACCATACAAGTACCCCAGGAAGGTGGAGTTTG...CCCCTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | AGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAATGTTCACCCTTCATGGCTGTaGTCAGACACCACCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RRRYPGRGPTEFEESKNVHPSWL*SDTTSL Trigger: CAAGCTGGTGGTGTCTGATCACAGCCATGAAGGGTG...AACATTTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | GTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCACCCAGTTTTGGGCAATTCTaGAACAAACTCCACCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VFSSTFTLPAFHRHPTPPSFGQF*NKLHLP Trigger: AGGAAGGTGGAGTTTGTTTCAGAATTGCCCAAAACT...GGGTGGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | AGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAATGTTGAAAACAACCGTCTGTaGAGCTGGGTGGGGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: RRRYPGRGPTEFEESKNVENNRL*SWVGLR Trigger: CCTAAGCCCCACCCAGCTGCACAGACGGTTGTTTTC...AACATTTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | CTTGGTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCGTCCAGGACATCACTTaGAAAGTTAAACTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGFLFHIYPSCIPSSSHTVQDIT*KVKLLR Trigger: CCTGAGGAGTTTAACTTTGCAAGTGATGTCCTGGAC...GGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | CTTGGTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCCACACCAAGACTTTGCAGATCTaGAAACTCTTCAGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: LGFLFHIYPSCIPSSSHTKTLQI*KLFSHC Trigger: GCAGTGGCTGAAGAGTTTCCAGATCTGCAAAGTCTT...GGTGTGGGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTTGGTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCTTTTCATCGATGATCTaGAAGTCAAAGGGTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: WGLGFLFHIYPSCIPSSSFSSMI*KSKGKM Trigger: CATCTTACCCTTTGACTTGCAGATCATCGATGAAAA...GGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAGACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | GGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAATGGTCACAATGGCTTTaGCTCGAGATATTTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: GEEEGIQEGDQLSLKKAKWSQWL*LEIFVF Trigger: GAATACAAATATCTCGAGCCAAAGCCATTGTGACCA...TTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CCA 90 bp | AGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAATGTTAGCCCTCTTCATCAATaGTCGCTCTATCCCCACTAT | + |
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Preference number: 4 (lower is better) Translates to: RRRYPGRGPTEFEESKNVSPLHQ*SLYPHY Trigger: ATAGTGGGGATAGAGCGACCATTGATGAAGAGGGCT...AACATTTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR GCA 90 bp | TGGGGTCTTGGTTTTCTCTTCCACATTTACCCTTCCTGCATTCCATCGTCATCCGCTTCAATAATTTTCTaGATGAAGGGATATATGACC | + |
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Preference number: 4 (lower is better) Translates to: WGLGFLFHIYPSCIPSSSASIIF*MKGYMT Trigger: GGTCATATATCCCTTCATGCAGAAAATTATTGAAGC...GGATGACGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAGACCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGGGGATCCTTCATCTTTaGCTTAATACAAGTATGGTC | + |
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Preference number: 4 (lower is better) Translates to: IQVSIFIVHKQSESALWKGILHL*LNTSMV Trigger: GACCATACTTGTATTAAGTCAAAGATGAAGGATCCC...CTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS TCA 90 bp | TTTGGGGTCGAATTGAGGGAGGTGGTGGATGAAGACTGTACATCCTaGTGTCCATGGCTCGATCAGGCACCCCACGGTAGCCAGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: FGVELREVVDEDCTS*CPWLDQAPHGSQNP Trigger: TGGATTCTGGCTACCGTGGGGTGCCTGATCGAGCCATGGACATCAGGATGTACAGTCTTCATCCACCACCTCCCTCAATTCGACCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS-3UTR CAA 90 bp | TGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGGCAAGTCCCTGGTaGTGCTTTGCCATCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: CTVEGEEEGIQEGDQLSLKASPW*CFAILG Trigger: CCCCAAGATGGCAAAGCACAACCAGGGACTTGCCTT...CAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS TCA 90 bp | CTTGATCTTCATTTCCCGGAGGGTGGCACTGCTGATCCCCGTTTCTaGCTGTCCATAGACCTCGTGGATGGAAAGACCTGTCCTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LDLHFPEGGTADPRF*LSIDLVDGKTCPLL Trigger: AAGCAAAGGACAGGTCTTTCCATCCACGAGGTCTATGGACAGTCAGAAACGGGGATCAGCAGTGCCACCCTCCGGGAAATGAAGATCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS GCA 90 bp | CCTTCAGTGTTGGGTGGGAGGATGTTGCCCTTTTCATCGATGATCTaGAAGTCAAAGGGTAAGATGGCCTTCCCTATGGAGCCTCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PSVLGGRMLPFSSMI*KSKGKMAFPMEPRL Trigger: CAAGCGAGGCTCCATAGGGAAGGCCATCTTACCCTTTGACTTGCAGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS CCA 90 bp | TTCCATCTTGGAGCTCCAACTCTTGAAAACAACCGTCTGTGCAGCTaGGTGGGGCTTAGGGAGAAGCCCTGTAAGACTTTGCAGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: FHLGAPTLENNRLCS*VGLREKPCKTLQIW Trigger: CCAGATCTGCAAAGTCTTACAGGGCTTCTCCCTAAGCCCCACCCAGCTGCACAGACGGTTGTTTTCAAGAGTTGGAGCTCCAAGATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS-3UTR CAA 90 bp | GTGCACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTTTGGGTGGGAGGATGTaGCCCTTTTCATCGATGATC | + |
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Preference number: 5 (lower is better) Translates to: VHCGRGRRRYPGRGPTEFLGGRM*PFSSMI Trigger: GATCATCGATGAAAAGGGCAACATCCTCCCACCCAA...AAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CAA 90 bp | ACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGATGTATCCTTCAGTGTaGGGTGGGAGGATGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: TVEGEEEGIQEGDQLSLKMYPSV*GGRMLP Trigger: GGGCAACATCCTCCCACCCAACACTGAAGGATACAT...CTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS TCA 90 bp | TGTATCCTTCAGTGTTGGGTGGGAGGATGTTGCCCTTTTCATCGATaGTCTGCAAGTCAAAGGGTAAGATGGCCTTCCCTATGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CILQCWVGGCCPFHR*SASQRVRWPSLWSL Trigger: GAGGCTCCATAGGGAAGGCCATCTTACCCTTTGACTTGCAGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS CCA 90 bp | CTTGGTTTTCAGATCAGGACACTCAGAAGCCACAGATTCCACCTCTaGGACAAGGCTAGCTGTGGTCACAATGGCTTTGGCTCGAGATAT | + |
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Preference number: 5 (lower is better) Translates to: LGFQIRTLRSHRFHL*DKASCGHNGFGSRY Trigger: ATATCTCGAGCCAAAGCCATTGTGACCACAGCTAGCCTTGTCCCAGAGGTGGAATCTGTGGCTTCTGAGTGTCCTGATCTGAAAACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CCA 90 bp | AGAAATCAAGCCACCCTTCATGGCTGTGATCAGACACCACCAGCTTaGTTTTCAGATCAGGACACTCAGAAGCCACAGATTCCACCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RNQATLHGCDQTPPA*FSDQDTQKPQIPPL Trigger: CAGAGGTGGAATCTGTGGCTTCTGAGTGTCCTGATCTGAAAACCAAGCTGGTGGTGTCTGATCACAGCCATGAAGGGTGGCTTGATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS TCA 90 bp | TGTATCCTTCAGTGTTGGGTGGGAGGATGTTGCCCTTTTCATCGATaGTCGTTTCTGACTGTCCATAGACCTCGTGGATGGAAAGACCTG | + |
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Preference number: 5 (lower is better) Translates to: CILQCWVGGCCPFHR*SFLTVHRPRGWKDL Trigger: CAGGTCTTTCCATCCACGAGGTCTATGGACAGTCAGAAACGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135683.3 |
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| CDS-3UTR CAA 90 bp | AGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAAGAAAGCAAAAATGTTGCCCTCCTCCTCCATTaGAGCCCAGTAGTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RRRYPGRGPTEFEESKNVALLLH*SPVVQD Trigger: GTCCTGGACTACTGGGCTCAAATGGAGGAGGAGGGC...AACATTTTTGCTTTCTTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CAA 90 bp | CAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGGGGACCAAAAGGCTGGACTaGGTCCTCTCTTGCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QVSIFIVHKQSESALWKGTKRLD*VLSCPP Trigger: AGGAGGGCAAGAGAGGACCAAGTCCAGCCTTTTGGT...CCCCTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CAA 90 bp | CACTGTGGAAGGGGAAGAAGAAGGTATCCAGGAAGGGGACCAACTGAGTTTGAACATGGTCATTCCATCTaGGAGCTCCAACTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: HCGRGRRRYPGRGPTEFEHGHSI*ELQLLK Trigger: TTTCAAGAGTTGGAGCTCCAAGATGGAATGACCATG...TTCAAACTCAGTTGGTCCCCTTCCTGGATACCTTCTTCTTCCCCTTCCACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS-3UTR CAA 90 bp | ATTCAAGTCAGTATTTTTATTGTCCACAAACAGTCTGAGAGTGCACTGTGGAAGGGCCAGGTGATCTCCTaGCTGCAGGCCACAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: IQVSIFIVHKQSESALWKGQVIS*LQATNL Trigger: CAGATTTGTGGCCTGCAGCAAGGAGATCACCTGGCC...CTTCCACAGTGCACTCTCAGACTGTTTGTGGACAATAAAAATACTGACTTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS GCA 90 bp | ACATGCACCACAAGATGTCAGATGTCTTCAGCTTCAATAATTTTCTaGATGAAGGGATATATGACCGGAAGGCAAGTCCCTGGTTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TCTTRCQMSSASIIF*MKGYMTGRQVPGCA Trigger: AGCACAACCAGGGACTTGCCTTCCGGTCATATATCCCTTCATGCAGAAAATTATTGAAGCTGAAGACATCTGACATCTTGTGGTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CCA 90 bp | AAGAAGATGGCCATGGGATCCTTCATCTTTGACTTAATACAAGTATaGTCTGGGGATGCTGATTTAATCAGTGAACAGAAATCAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: KKMAMGSFIFDLIQV*SGDADLISEQKSSH Trigger: GTGGCTTGATTTCTGTTCACTGATTAAATCAGCATCCCCAGACCATACTTGTATTAAGTCAAAGATGAAGGATCCCATGGCCATCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CCA 72 bp | GTCCGGGCTGCTCACCACCGCAGACTCTGCCACTGCTaGGTGCTCCGCCAAGGCGTTCTCCACCTCTACAGG | + |
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Preference number: 6 (lower is better) Translates to: VRAAHHRRLCHC*VLRQGVLHLYR Trigger: CCTGTAGAGGTGGAGAACGCCTTGGCGGAGCACCCAGCAGTGGCAGAGTCTGCGGTGGTGAGCAGCCCGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS GCA 72 bp | CTTGTCCGGGCTGCTCACCACCGCAGACTCTGCCACTaGTGGGTGCTCCGCCAAGGCGTTCTCCACCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LVRAAHHRRLCH*WVLRQGVLHLY Trigger: GTAGAGGTGGAGAACGCCTTGGCGGAGCACCCAGCAGTGGCAGAGTCTGCGGTGGTGAGCAGCCCGGACAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CAA 72 bp | AGGACAATAAACGCCTTCACCACCTCTCCTCGATCCTaGTCCGGGCTGCTCACCACCGCAGACTCTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RTINAFTTSPRS*SGLLTTADSAT Trigger: AGTGGCAGAGTCTGCGGTGGTGAGCAGCCCGGACAAGGATCGAGGAGAGGTGGTGAAGGCGTTTATTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CAA 72 bp | TCTCCTTGCTGCAGGCCACAAATCTGCTCAAAGACGTaGGCAGTGCGACAGGTGAGGTCCCTCAGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPCCRPQICSKT*AVRQVRSLSFL Trigger: CAGGAAGCTGAGGGACCTCACCTGTCGCACTGCCAACGTCTTTGAGCAGATTTGTGGCCTGCAGCAAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS TCA 72 bp | CATTTCCCGGAGGGTGGCACTGCTGATCCCCGTTTCTaGCTGTCCATAGACCTCGTGGATGGAAAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: HFPEGGTADPRF*LSIDLVDGKTC Trigger: ACAGGTCTTTCCATCCACGAGGTCTATGGACAGTCAGAAACGGGGATCAGCAGTGCCACCCTCCGGGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS CAA 72 bp | TCCACCTCTACAGGCCCGATGCGATACCCGGAAGCATaGATGACATCATCGCCCCTTCCCAAGAACCAGATG | + |
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Preference number: 6 (lower is better) Translates to: STSTGPMRYPEA*MTSSPLPKNQM Trigger: CATCTGGTTCTTGGGAAGGGGCGATGATGTCATCAATGCTTCCGGGTATCGCATCGGGCCTGTAGAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS TCA 72 bp | CAGGCACCCCACGGTAGCCAGAATCCATCCTGGGTCTaGCATGCACCACAAGATGTCAGATGTCTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QAPHGSQNPSWV*HAPQDVRCLQL Trigger: AAGCTGAAGACATCTGACATCTTGTGGTGCATGTCAGACCCAGGATGGATTCTGGCTACCGTGGGGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CCA 72 bp | GGAGCTCCAACTCTTGAAAACAACCGTCTGTGCAGCTaGGTGGGGCTTAGGGAGAAGCCCTGTAAGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GAPTLENNRLCS*VGLREKPCKTL Trigger: CAAAGTCTTACAGGGCTTCTCCCTAAGCCCCACCCAGCTGCACAGACGGTTGTTTTCAAGAGTTGGAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS CCA 72 bp | CAGATCAGGACACTCAGAAGCCACAGATTCCACCTCTaGGACAAGGCTAGCTGTGGTCACAATGGCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: QIRTLRSHRFHL*DKASCGHNGFG Trigger: GCCAAAGCCATTGTGACCACAGCTAGCCTTGTCCCAGAGGTGGAATCTGTGGCTTCTGAGTGTCCTGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS CCA 72 bp | CTCCAACTCTTGAAAACAACCGTCTGTGCAGCTGGGTaGGGCTTAGGGAGAAGCCCTGTAAGACTTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LQLLKTTVCAAG*GLGRSPVRLCR Trigger: TCTGCAAAGTCTTACAGGGCTTCTCCCTAAGCCCCACCCAGCTGCACAGACGGTTGTTTTCAAGAGTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS CAA 90 bp | ACTCCTCAGGTGAATCATGGTCATTCCATCTTGGAGCTCCAACTCTaGAAAACAACCGTCTGTGCAGCTGGGTGGGGCTTAGGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TPQVNHGHSILELQL*KTTVCAAGWGLGRS Trigger: GCTTCTCCCTAAGCCCCACCCAGCTGCACAGACGGTTGTTTTCAAGAGTTGGAGCTCCAAGATGGAATGACCATGATTCACCTGAGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS TCA 72 bp | CAGTGTTGGGTGGGAGGATGTTGCCCTTTTCATCGATaGTCGTTTCTGACTGTCCATAGACCTCGTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: QCWVGGCCPFHR*SFLTVHRPRGW Trigger: CCATCCACGAGGTCTATGGACAGTCAGAAACGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135683.3 |
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| CDS CCA 72 bp | GCCACCCTTCATGGCTGTGATCAGACACCACCAGCTTaGTTTTCAGATCAGGACACTCAGAAGCCACAGATT | + |
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Preference number: 6 (lower is better) Translates to: ATLHGCDQTPPA*FSDQDTQKPQI Trigger: AATCTGTGGCTTCTGAGTGTCCTGATCTGAAAACCAAGCTGGTGGTGTCTGATCACAGCCATGAAGGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS TCA 72 bp | CAGTGTTGGGTGGGAGGATGTTGCCCTTTTCATCGATaGTCTGCAAGTCAAAGGGTAAGATGGCCTTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: QCWVGGCCPFHR*SASQRVRWPSL Trigger: TAGGGAAGGCCATCTTACCCTTTGACTTGCAGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS CAA 72 bp | GTGAATCATGGTCATTCCATCTTGGAGCTCCAACTCTaGAAAACAACCGTCTGTGCAGCTGGGTGGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: VNHGHSILELQL*KTTVCAAGWGL Trigger: TAAGCCCCACCCAGCTGCACAGACGGTTGTTTTCAAGAGTTGGAGCTCCAAGATGGAATGACCATGATTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS CAA 90 bp | TGGGACAAGGCTAGCTGTGGTCACAATGGCTTTGGCTCGAGATATTaGTATTCGGTAGAGAATGTCCTTGGCTTTCAGTTGGGTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: WDKASCGHNGFGSRY*YSVENVLGFQLGSP Trigger: GGGACTACCCAACTGAAAGCCAAGGACATTCTCTACCGAATACAAATATCTCGAGCCAAAGCCATTGTGACCACAGCTAGCCTTGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047929.13 ENSMUST00000126367.8 ENSMUST00000135683.3 |
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| CDS TCA 72 bp | TGGGAGGATGTTGCCCTTTTCATCGATGATCGTTTCTaGCTGTCCATAGACCTCGTGGATGGAAAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WEDVALFIDDRF*LSIDLVDGKTC Trigger: ACAGGTCTTTCCATCCACGAGGTCTATGGACAGTCAGAAACGATCATCGATGAAAAGGGCAACATCCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135683.3 |
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| CDS CAA 72 bp | ATGCCAATGTATCCTTCAGTGTTGGGTGGGAGGATGTaGCCCTTTTCATCGATGATCTGCAAGTCAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: MPMYPSVLGGRM*PFSSMICKSKG Trigger: ACCCTTTGACTTGCAGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGGATACATTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047929.13 |
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| CDS CAA 72 bp | ATGCCAATGTATCCTTCAGTGTTGGGTGGGAGGATGTaGCCCTTTTCATCGATGATCGTTTCTGACTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: MPMYPSVLGGRM*PFSSMIVSDCP Trigger: TGGACAGTCAGAAACGATCATCGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGGATACATTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135683.3 |
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| CDS TCA 72 bp | TTGAACAGTACCTCTACAATGACTTTGGGGTCGAATTaGGGGAGGTGGTGGATGAAGACTGTACATCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LNSTSTMTLGSN*GRWWMKTVHPD Trigger: ATCAGGATGTACAGTCTTCATCCACCACCTCCCTCAATTCGACCCCAAAGTCATTGTAGAGGTACTGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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| CDS GCA 72 bp | ACAAGATGTCAGATGTCTTCAGCTTCAATAATTTTCTaGATGAAGGGATATATGACCGGAAGGCAAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: TRCQMSSASIIF*MKGYMTGRQVP Trigger: AGGGACTTGCCTTCCGGTCATATATCCCTTCATGCAGAAAATTATTGAAGCTGAAGACATCTGACATCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047929.13 ENSMUST00000135683.3 |
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