Pregenerated sensors for ACSL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024981Ensembl transcript IDs: ENSMUST00000043150.6, ENSMUST00000224337.2, ENSMUST00000224414.2, ENSMUST00000225454.2, ENSMUST00000225551.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAAGTATCTATATTTTAGACAAAAACAGCAAGCATCCACACTGTaGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: GKYLYFRQKQQASTL*YSLACFKTREAAIE Trigger: CTCAATGGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTGCTGTTTTTGTCTAAAATATAGATACTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR CCA 90 bp | TTTGTTCCCAACTCAGGACAGTACTTTAGTGCTTGCTTCATTTACTaGAAAAGTTCACTGGACATAGTTTCCACTTCTTCCCCCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: FVPNSGQYFSACFIY*KSSLDIVSTSSPTA Trigger: AGCTGTGGGGGAAGAAGTGGAAACTATGTCCAGTGAACTTTTCCAGTAAATGAAGCAAGCACTAAAGTACTGTCCTGAGTTGGGAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR TCA 90 bp | GCCTCATCATTTTCAAATCAAATAATTCTAGCATGCAGACAACATTaGAAAATCCAGCTGATTGGTCACATGGTTCTTTCTTCTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: ASSFSNQIILACRQH*KIQLIGHMVLSSSC Trigger: ACAAGAAGAAGAAAGAACCATGTGACCAATCAGCTGGATTTTTCAATGTTGTCTGCATGCTAGAATTATTTGATTTGAAAATGATGAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR GCA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCAGATCCTCCTGCATCTaGCTCCTGACTGTTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: QASTLWYSLACFKTREAARSSCI*LLTVRI Trigger: AATCCTAACAGTCAGGAGGCAGATGCAGGAGGATCT...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCTCTTTTGGACCAGAAGAATTAGCATTTGTGGAATCTTTACATGGCTTCAGCAAGGGTCAGAATaGTGTATTGGGGGACATCAG | + |
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Preference number: 2 (lower is better) Translates to: AQLFWTRRISICGIFTWLQQGSE*CIGGHQ Trigger: CTGATGTCCCCCAATACAGCATTCTGACCCTTGCTG...AAGCCATGTAAAGATTCCACAAATGCTAATTCTTCTGGTCCAAAAGAGCTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGATTGAAAAATCCAGCTaGTTGGTCACATGGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AARKEYKLKLEYHSHAWWIEKSS*LVTWFF Trigger: AAAGAACCATGTGACCAATCAGCTGGATTTTTCAAT...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGGCTTGCTTCATTTACTaGAAAAGTTCACTGGACATA | + |
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Preference number: 2 (lower is better) Translates to: AARKEYKLKLEYHSHAWWACFIY*KSSLDI Trigger: TATGTCCAGTGAACTTTTCCAGTAAATGAAGCAAGC...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAGATTTAAGGAGGCTCGGAAGCCCAGCTCTTTTGGACCAGAAGAATTAGTCAGAATGCTGTATTaGGGGACATCAGTTTATATA | + |
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Preference number: 2 (lower is better) Translates to: QQRFKEARKPSSFGPEELVRMLY*GTSVYI Trigger: TATATAAACTGATGTCCCCCAATACAGCATTCTGAC...TAATTCTTCTGGTCCAAAAGAGCTGGGCTTCCGAGCCTCCTTAAATCTCTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
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| 3UTR CAA 90 bp | CGCCTCATCATTTTCAAATCAAATAATTCTAGCATGCAGACAACATaGAAAAATCCAGCTGATTGGTCACATGGTTCTTTCTTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RLIIFKSNNSSMQTT*KNPADWSHGSFFFL Trigger: CAAGAAGAAGAAAGAACCATGTGACCAATCAGCTGGATTTTTCAATGTTGTCTGCATGCTAGAATTATTTGATTTGAAAATGATGAGGCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTAAAAATCCAGCTGATTaGTCACATGGTTCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPKNPAD*SHGSFF Trigger: GAAGAAAGAACCATGTGACCAATCAGCTGGATTTTT...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATCAGTACTTTAGTGCTTaGTTCATTTACTGGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SHHSSQDCRHNIISVIVYQYFSA*FIYWKS Trigger: ACTTTTCCAGTAAATGAAGCAAGCACTAAAGTACTG...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR GCA 72 bp | TCATTGTGTAACCCAGCCTCAAACCTGCAGTGCTCTTaGCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATG | + |
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Preference number: 3 (lower is better) Translates to: SLCNPASNLQCS*PGLLSVVVVGM Trigger: CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAGGCTGGGTTACACAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR GCA 72 bp | AGGTTCTCATTGTGTAACCCAGCCTCAAACCTGCAGTaGTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: RFSLCNPASNLQ*SCPGLLSVVVV Trigger: CACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAGGCTGGGTTACACAATGAGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR TCA 72 bp | ACCACATGCTATCTGACAGTAAAATACTGCAGGGACTaGAGGCCAAGGAGAGAGATCCACAGAAGACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TTCYLTVKYCRD*RPRREIHRRQA Trigger: GGCCTGTCTTCTGTGGATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCAGAGATTTAAGGAGGCTCGGAAGCCCAGCTCTTTTGGACCAGAAGAATGGTCAGAATGCTGTATaGGGGGACATCAGTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: LSRDLRRLGSPALLDQKNGQNAV*GDISLY Trigger: ATATAAACTGATGTCCCCCAATACAGCATTCTGACC...ATTCTTCTGGTCCAAAAGAGCTGGGCTTCCGAGCCTCCTTAAATCTCTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGAGCATGCAGACAACATaGAAAAATCCAGCTGATTGG | + |
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Preference number: 3 (lower is better) Translates to: AARKEYKLKLEYHSHAWWSMQTT*KNPADW Trigger: CCAATCAGCTGGATTTTTCAATGTTGTCTGCATGCT...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR-3UTR CAA 90 bp | GTCCAACCACATAGACTAGAGCATCAGACACTCAGCAGAGATTTAAGGAGGCTCGAATCTTTACATGGCTaGGGTAAAATCATCAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: VQPHRLEHQTLSRDLRRLESLHG*GKIISK Trigger: CTTGCTGATGATTTTACCCAAGCCATGTAAAGATTC...GAGCCTCCTTAAATCTCTGCTGAGTGTCTGATGCTCTAGTCTATGTGGTTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
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| CDS-3UTR GCA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGGAAAGCGCCCCTCCGTaGTCCTCCCTCAATCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMESAPP*SSLNPH Trigger: GTGGGGATTGAGGGAGGAGCACGGAGGGGCGCTTTC...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR GCA 90 bp | AAAGATGATGGCTTCTGTACCCAGCGTGTCATACAGGGGGACAGCTACCATGGAGAAAGCGCCCCTCCGTaGTCCTCCCTCAATCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KDDGFCTQRVIQGDSYHGESAPP*SSLNPH Trigger: GTGGGGATTGAGGGAGGAGCACGGAGGGGCGCTTTC...TCCATGGTAGCTGTCCCCCTGTATGACACGCTGGGTACAGAAGCCATCATCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS-3UTR CCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATATGTCAAGACTGGAGTaGAGATGGGGGCGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYMSRLE*RWGRLQ Trigger: CTGGAGCCGCCCCCATCTCCACTCCAGTCTTGACAT...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR TCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATCTGGCTGAGGTCTGTTaGTCAGCCACAGGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYLAEVC*SATGRW Trigger: CCATCTTCCTGTGGCTGATCAACAGACCTCAGCCAG...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGATCGTCTTCAGGCCTaGTGTGAGGCCCTTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYDRLQA*CEALFH Trigger: GTGGAAAAGGGCCTCACACCAGGCCTGAAGACGATC...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCGATCAGGGCCGGAGTTaGAAGTGGGGAAAACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QASTLWYSLACFKTREAADQGRS*KWGKQE Trigger: TTCTTGTTTTCCCCACTTCCAACTCCGGCCCTGATC...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR TCA 90 bp | AGGGATATCAGCCCTGTTGATGACAAAGATGATGGCTTCTGTACCCAGCGTGTCCTGGCTGAGGTCTGTTaGTCAGCCACAGGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RDISPVDDKDDGFCTQRVLAEVC*SATGRW Trigger: CCATCTTCCTGTGGCTGATCAACAGACCTCAGCCAG...GACACGCTGGGTACAGAAGCCATCATCTTTGTCATCAACAGGGCTGATATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS-3UTR TCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATAGGCTAACTCAGAGATaGCCCACTCTGGCCTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYRLTQR*PTLAYF Trigger: AAAATAGGCCAGAGTGGGTCATCTCTGAGTTAGCCT...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGAGATTTAAGGAGGCTCGGAAGCCCAGCTCTTTTGGACCAGAAGAATGGAGCCCAGGTACTCTaGTCGATCAGACACCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSRDLRRLGSPALLDQKNGAQVL*SIRHLF Trigger: AAACAGGTGTCTGATCGAGCAGAGTACCTGGGCTCC...ATTCTTCTGGTCCAAAAGAGCTGGGCTTCCGAGCCTCCTTAAATCTCTGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
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| CDS-3UTR GCA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCGTGAAGGGCTCTGGATaGACAAAGATACTTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: QASTLWYSLACFKTREAAVKGSG*TKILLT Trigger: GGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCAC...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CCTGTTGATGACAAAGATGATGGCTTCTGTACCCAGCGTGTCATACAGGGGGACGATCAGGGCCGGAGTTaGAAGTGGGGAAAACAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PVDDKDDGFCTQRVIQGDDQGRS*KWGKQE Trigger: TTCTTGTTTTCCCCACTTCCAACTCCGGCCCTGATC...GTCCCCCTGTATGACACGCTGGGTACAGAAGCCATCATCTTTGTCATCAACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGGAAGAATGTCAAGACTaGAGTGGAGATGGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AARKEYKLKLEYHSHAWWEECQD*SGDGGG Trigger: GCCGCCCCCATCTCCACTCCAGTCTTGACATTCTTC...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR TCA 90 bp | GGGATATCAGCCCTGTTGATGACAAAGATGATGGCTTCTGTACCCAGCGTGTCAAGAGGTAAAACTGGCTaGGGTCTGTTGATCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GISALLMTKMMASVPSVSRGKTG*GLLISH Trigger: GTGGCTGATCAACAGACCTCAGCCAGTTTTACCTCT...TGACACGCTGGGTACAGAAGCCATCATCTTTGTCATCAACAGGGCTGATATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS-3UTR TCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATCTCCTTGTGCCAACTTaGAAATATTCTTCTTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYLLVPT*KYSSSG Trigger: ACCGGAAGAAGAATATTTTCAAGTTGGCACAAGGAG...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | ACAAAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCACCTTTACCCCGATCTTaGCTGCAAATGAGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TKHGIDFRPYFCKASEPSPLPRS*LQMREV Trigger: CACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGG...TGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
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| CDS-3UTR CCA 90 bp | CCTGTTGATGACAAAGATGATGGCTTCTGTACCCAGCGTGTCATACAGGGGGACAGAGATGACCCACTCTaGCCTATTTTGAGCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PVDDKDDGFCTQRVIQGDRDDPL*PILSKD Trigger: ATCTTTGCTCAAAATAGGCCAGAGTGGGTCATCTCT...GTCCCCCTGTATGACACGCTGGGTACAGAAGCCATCATCTTTGTCATCAACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS-3UTR CCA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCAAAAACTTGCAATACTaGTCTGCTCCTGGAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: QASTLWYSLACFKTREAAKNLQY*SAPGIN Trigger: GTTTATTCCAGGAGCAGACCAGTATTGCAAGTTTTT...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATCCTTTACCCCGATCTTaGCTGCAAATGAGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HMLSDSKILQGLKAKERDPLPRS*LQMREV Trigger: CACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGG...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCGCAAGTCTTCTAAAATaGCTTCCTTTACACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: QASTLWYSLACFKTREAAASLLK*LPLHIG Trigger: ACCAATGTGTAAAGGAAGCCATTTTAGAAGACTTGC...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGGTGTCTGGAAGAACTTaGCAAGCTCTACTCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: AARKEYKLKLEYHSHAWWVSGRT*QALLVW Trigger: CCAAACGAGTAGAGCTTGCCAAGTTCTTCCAGACAC...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | ACAAAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCAGTGTCTGGAAGAACTTaGCAAGCTCTACTCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: TKHGIDFRPYFCKASEPSVSGRT*QALLVW Trigger: CCAAACGAGTAGAGCTTGCCAAGTTCTTCCAGACAC...TGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
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| CDS-3UTR TCA 90 bp | AAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCATCAGCACAGTTCTTCAAATaGTCCCTTTACCCCGATCTT | + |
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Preference number: 4 (lower is better) Translates to: KHGIDFRPYFCKASEPSSAQFFK*SLYPDL Trigger: AAGATCGGGGTAAAGGGATCATTTGAAGAACTGTGC...TGATGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
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| CDS-3UTR GCA 90 bp | AAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCATCAGTGAAGGGCTCTGGATaGACAAAGATACTTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: KHGIDFRPYFCKASEPSSVKGSG*TKILLT Trigger: GGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCAC...TGATGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTTTGTTCCCAACTCAGGACAGTACTTTAGTGCTTGCTTCATTTACTGGAAGGTCATTGTTCTTCTaGAAAGCGCCCCTCCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SALFPTQDSTLVLASFTGRSLFF*KAPLRA Trigger: AGCACGGAGGGGCGCTTTCCAGAAGAACAATGACCT...TCCAGTAAATGAAGCAAGCACTAAAGTACTGTCCTGAGTTGGGAACAAAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGACAGCAAGTCCTCTTTaGAAATTTTCATACAACGTC | + |
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Preference number: 4 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMTASPL*KFSYNV Trigger: GACGTTGTATGAAAATTTCCAAAGAGGACTTGCTGT...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGTTTGTAGGGCTGGTTTaGCTTTCTGTATCCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: AARKEYKLKLEYHSHAWWFVGLV*LSVSQA Trigger: TGCTTGGGATACAGAAAGCCAAACCAGCCCTACAAA...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGTTTCAGAGTTCCATTTaGAAGCCAGCGACCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: AARKEYKLKLEYHSHAWWFQSSI*KPATNV Trigger: GACATTGGTCGCTGGCTTCCAAATGGAACTCTGAAA...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATAATAGTGAAGGGCTCTaGATGCACAAAGATACTTTT | + |
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Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYNSEGL*MHKDTF Trigger: AAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATT...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| 3UTR CAA 72 bp | GCGTGCACCACCACTGCCCGGCCATATGATTCTTTTTaGATGCTAATTCTCATCACAGTTCACAAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: ACTTTARPYDSF*MLILITVHKTA Trigger: TGCAGTCTTGTGAACTGTGATGAGAATTAGCATCAAAAAAGAATCATATGGCCGGGCAGTGGTGGTGCACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR TCA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATGCACAGTTCTTCAAATaGTCCCTTTACCCCGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMLSDSKILQGLKAKERDAQFFK*SLYPDL Trigger: AAGATCGGGGTAAAGGGATCATTTGAAGAACTGTGC...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR GCA 90 bp | TTGACATTTACAAGTAGAGGCACCACATGCTATCTGACAGTAAAATACTGCAGGGGAGCCCAGGTACTCTaGTCGATCAGACACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTSRGTTCYLTVKYCRGAQVL*SIRHLF Trigger: AAACAGGTGTCTGATCGAGCAGAGTACCTGGGCTCC...CCTGCAGTATTTTACTGTCAGATAGCATGTGGTGCCTCTACTTGTAAATGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATAAGATGCCAACAAATTaGTCCTGTGATGACTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LKPAVLLPWPPECCSCGYKMPTN*SCDDLY Trigger: ATATAAGTCATCACAGGACCAATTTGTTGGCATCTT...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGATACTGGTCTGCTCCTaGAATAAACATTTTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMILVCS*NKHFQS Trigger: AGATTGAAAATGTTTATTCCAGGAGCAGACCAGTAT...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTACTGGAGTCCCAACATaGCCTGCTGTCCAGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPTGVPT*PAVQSP Trigger: TGGGGACTGGACAGCAGGTCATGTTGGGACTCCAGT...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCAGCACAAAGATACTTTTaGCCTGCTCAAAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKHGIDFRPYFCKASEPSAQRYF*PAQRIS Trigger: TGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGC...TGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
||
| CDS-3UTR GCA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATGACTTATATCCTTTATaGAAAAGACAGGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMLSDSKILQGLKAKERDDLYPL*KRQEPR Trigger: CCTGGGCTCCTGTCTTTTGCATAAAGGATATAAGTC...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATGGCTTCTGTACCCAGCGTGTCATACAGGGGGACAGCTACCATGGAAAGATGCCAACAAATTaGTCCTGTGATGACTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: KDDGFCTQRVIQGDSYHGKMPTN*SCDDLY Trigger: ATATAAGTCATCACAGGACCAATTTGTTGGCATCTT...TCCATGGTAGCTGTCCCCCTGTATGACACGCTGGGTACAGAAGCCATCATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
||
| CDS-3UTR CCA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATAACCGGATATCTCCTTaGAAGAACCCAATTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HMLSDSKILQGLKAKERDNRISP*KNPILP Trigger: AGGCAAAATTGGGTTCTTCCAAGGAGATATCCGGTT...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATGAAAGCAGCCATGTTTaGAACAACATTTTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMLSDSKILQGLKAKERDESSHV*NNIFMG Trigger: ACCCATGAAAATGTTGTTTCAAACATGGCTGCTTTC...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR GCA 90 bp | AGTGCTTTGTTCCCAACTCAGGACAGTACTTTAGTGCTTGCTTCATTTACTGGACCATGGACAAAAACTTaGAATACTGGTCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SALFPTQDSTLVLASFTGPWTKT*NTGLLL Trigger: CAGGAGCAGACCAGTATTGCAAGTTTTTGTCCATGG...TCCAGTAAATGAAGCAAGCACTAAAGTACTGTCCTGAGTTGGGAACAAAGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | ACAAAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCAGCAAGTCTTCTAAAATaGCTTCCTTTACACATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKHGIDFRPYFCKASEPSASLLK*LPLHIG Trigger: ACCAATGTGTAAAGGAAGCCATTTTAGAAGACTTGC...TGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
||
| CDS-3UTR CCA 90 bp | AAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCATCAAATAGTGAAGGGCTCTaGATGCACAAAGATACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KHGIDFRPYFCKASEPSSNSEGL*MHKDTF Trigger: AAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATT...TGATGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
||
| CDS-3UTR CCA 90 bp | TTACATGGCTTGGGTAAAATCATCAGCAAGGGTCAGAATGCTGTATTGGGGGACTCAACATGGTACCTCTaGCCTATTTTGAGCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHGLGKIISKGQNAVLGDSTWYL*PILSKD Trigger: ATCTTTGCTCAAAATAGGCCAGAGGTACCATGTTGA...GTCCCCCAATACAGCATTCTGACCCTTGCTGATGATTTTACCCAAGCCATGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
||
| CDS-3UTR GCA 90 bp | TTGACATTTACAAGTAGAGGCACCACATGCTATCTGACAGTAAAATACTGCAGGCCAGCTTTACAAAATTaGAAGCCACTGGAGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTFTSRGTTCYLTVKYCRPALQN*KPLESQ Trigger: TTGGGACTCCAGTGGCTTGCAATTTTGTAAAGCTGG...CCTGCAGTATTTTACTGTCAGATAGCATGTGGTGCCTCTACTTGTAAATGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGTCTTCAAAGGTGTCTTaGCTTCATTTTGTACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AARKEYKLKLEYHSHAWWSSKVS*LHFVPY Trigger: ATAAGGTACAAAATGAAGCCAAGACACCTTTGAAGA...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATAGAGGTAAAACTGGCTaGGGTCTGTTGATCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHHSSQDCRHNIISVIVYRGKTG*GLLISH Trigger: GTGGCTGATCAACAGACCTCAGCCAGTTTTACCTCT...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTATCCCATTGCAGCCCTaGAGAATGTCAAGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPIPLQP*RMSRLE Trigger: CTCCAGTCTTGACATTCTTCAGGGCTGCAATGGGAT...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | TTGACATTTACAAGTAGAGGCACCACATGCTATCTGACAGTAAAATACTGCAGGCGTAAGCTCTCCCCATaGACAAAAACTTGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTSRGTTCYLTVKYCRRKLSP*TKTCNT Trigger: AGTATTGCAAGTTTTTGTCCATGGGGAGAGCTTACG...CCTGCAGTATTTTACTGTCAGATAGCATGTGGTGCCTCTACTTGTAAATGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATGGTTGTCCAAGTCAATaGGAGGTAAAACTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHHSSQDCRHNIISVIVYGCPSQ*EVKLAE Trigger: CTCAGCCAGTTTTACCTCTCATTGACTTGGACAACC...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTAGGGAAGGTAGGATATaGTCACATCATCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPREGRI*SHHQRW Trigger: CCACCTCTGATGATGTGACCATATCCTACCTTCCCT...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | TCATCAGCAAGGGTCAGAATGCTGTATTGGGGGACATCAGTTTATATAGTTAGCAAGATGCCAACAAATTaGTCCTGTGATGACTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: SSARVRMLYWGTSVYIVSKMPTN*SCDDLY Trigger: ATATAAGTCATCACAGGACCAATTTGTTGGCATCTT...GCTAACTATATAAACTGATGTCCCCCAATACAGCATTCTGACCCTTGCTGATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
||
| CDS-3UTR GCA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATTTGAACATCCACCTGTaGATTCTGTTTGGCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHHSSQDCRHNIISVIVYLNIHL*ILFGHK Trigger: CTTATGGCCAAACAGAATGCACAGGTGGATGTTCAA...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CCA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATAGAGATGACCCACTCTaGCCTATTTTGAGCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SHHSSQDCRHNIISVIVYRDDPL*PILSKD Trigger: ATCTTTGCTCAAAATAGGCCAGAGTGGGTCATCTCT...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR TCA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTGCACAAAGATACTTTTaGCCTGCTCAAAGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPAQRYF*PAQRIS Trigger: TGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGC...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS CCA 90 bp | TTCAAACACCCAACATCCCATTGCAGCCCTGAAGAATGTCAAGACTaGAGTGGAGATGGGGGCGGCTCCAGTGATCATGAGGCGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FKHPTSHCSPEECQD*SGDGGGSSDHEANL Trigger: AAGGTTCGCCTCATGATCACTGGAGCCGCCCCCATCTCCACTCCAGTCTTGACATTCTTCAGGGCTGCAATGGGATGTTGGGTGTTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGGTTAGCATAGCTCCTTaGGGGTCACCTGTAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMVSIAP*GSPVVP Trigger: TGGAACTACAGGTGACCCCAAAGGAGCTATGCTAAC...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS TCA 90 bp | ATCCCCACAGACTGGTTGTCCAAGTCAATGAGAGGTAAAACTGGCTaGGGTCTGTTGATCAGCCACAGGAAGATGGCCGTTCCAAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: IPTDWLSKSMRGKTG*GLLISHRKMAVPNV Trigger: GACGTTTGGAACGGCCATCTTCCTGTGGCTGATCAACAGACCTCAGCCAGTTTTACCTCTCATTGACTTGGACAACCAGTCTGTGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043150.6 ENSMUST00000224337.2 ENSMUST00000225551.2 |
||
| CDS-3UTR CAA 90 bp | CAAGCATCCACACTGTGGTACAGCCTAGCATGTTTCAAGACCAGGGAGGCAGCCTGGAAGAACCCAATTTaGCCTCCACAGGAAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: QASTLWYSLACFKTREAAWKNPI*PPQENK Trigger: CTTATTTTCCTGTGGAGGCAAAATTGGGTTCTTCCA...GGCTGCCTCCCTGGTCTTGAAACATGCTAGGCTGTACCACAGTGTGGATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | AAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCATCACCCTTTACCCCGATCTaGGCTGCAAATGAGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KHGIDFRPYFCKASEPSSPFTPI*AANEGS Trigger: ACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGGG...TGATGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
||
| CDS GCA 90 bp | GCAAAGATGCCAACAAATTGGTCCTGTGATGACTTATATCCTTTATaGAAAAGACAGGAGCCCAGGTACTCTGGAAAGCGCCCCTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKMPTNWSCDDLYPL*KRQEPRYSGKRPSV Trigger: CACGGAGGGGCGCTTTCCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATATAAGTCATCACAGGACCAATTTGTTGGCATCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
||
| CDS CCA 90 bp | TCGATCAGACACCTGTTTGTAGGAGATCCATTTGTAGGGCTGGTTTaGCTTTCTGTATCCCAAGCAAGGCCCATTGTCAGACACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SIRHLFVGDPFVGLV*LSVSQARPIVRHSK Trigger: CTTGCTGTGTCTGACAATGGGCCTTGCTTGGGATACAGAAAGCCAAACCAGCCCTACAAATGGATCTCCTACAAACAGGTGTCTGATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225551.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAGAGATTTAAGGAGGCTCGGAAGCCCAGCTCTTTTGGACCAGAAGAATATTTGTAGGGCTGGTTaGGCTTTCTGTATCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSRDLRRLGSPALLDQKNICRAG*AFCIPS Trigger: GCTTGGGATACAGAAAGCCAAACCAGCCCTACAAAT...ATTCTTCTGGTCCAAAAGAGCTGGGCTTCCGAGCCTCCTTAAATCTCTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225454.2 |
||
| CDS GCA 90 bp | AGTGTCGGTGTCAGAAGTCCGTTTTCAATAGTGAAGGGCTCTGGATaGACAAAGATACTTTTGACCTGCTCAAAGGATTTCAGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVGVRSPFSIVKGSG*TKILLTCSKDFRPP Trigger: GGGTGGCCTGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGAAAACGGACTTCTGACACCGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
||
| CDS CCA 90 bp | ATTGGTTTTTGCACAGTTCTTCAAATGATCCCTTTACCCCGATCTTaGCTGCAAATGAGGGAAGTGAATCTGGGTCGGGAACCACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: IGFCTVLQMIPLPRS*LQMREVNLGREPPL Trigger: GAGTGGTGGTTCCCGACCCAGATTCACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGGGATCATTTGAAGAACTGTGCAAAAACCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGCACAGCAAGTCCTCTTaGGAAATTTTCATACAACGT | + |
|
Preference number: 5 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMHSKSS*EIFIQR Trigger: ACGTTGTATGAAAATTTCCAAAGAGGACTTGCTGTG...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | CTCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATTGTCTTGGCTTCATTTaGTACCTTATCATAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKPAVLLPWPPECCSCGYCLGFI*YLIIDP Trigger: AGGGTCTATGATAAGGTACAAAATGAAGCCAAGACA...ATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGTCCAGCTTTACAAAATaGCAAGCCACTGGAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AARKEYKLKLEYHSHAWWSSFTK*QATGVP Trigger: TGGGACTCCAGTGGCTTGCAATTTTGTAAAGCTGGA...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | TCAAACCTGCAGTGCTCTTGCCCTGGCCTCCTGAGTGTTGTAGTTGTGGGTATGTGCACAAAGATACTTTaGACCTGCTCAAAGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNLQCSCPGLLSVVVVGMCTKIL*TCSKDF Trigger: GAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCA...CATACCCACAACTACAACACTCAGGAGGCCAGGGCAAGAGCACTGCAGGTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | CACATGCTATCTGACAGTAAAATACTGCAGGGACTGAAGGCCAAGGAGAGAGATGGCTTCCTTGAATCTTaGAAAACACGAGCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HMLSDSKILQGLKAKERDGFLES*KTRACP Trigger: GGGACAAGCTCGTGTTTTCAAAGATTCAAGGAAGCC...ATCTCTCTCCTTGGCCTTCAGTCCCTGCAGTATTTTACTGTCAGATAGCATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS GCA 90 bp | GCAAAGATGCCAACAAATTGGTCCTGTGATGACTTATATCCTTTATaGAAAAGACAGGAGCCCAGGTACTCTGCTCGATCAGACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AKMPTNWSCDDLYPL*KRQEPRYSARSDTC Trigger: ACAGGTGTCTGATCGAGCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATATAAGTCATCACAGGACCAATTTGTTGGCATCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225454.2 |
||
| CDS CCA 90 bp | TTTCAGTGTCGGTGTCAGAAGTCCGTTTTCAATAGTGAAGGGCTCTaGATGCACAAAGATACTTTTGACCTGCTCAAAGGATTTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQCRCQKSVFNSEGL*MHKDTFDLLKGFQA Trigger: GGCCTGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGAAAACGGACTTCTGACACCGACACTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGGGAGGCACTGGTTTTTaGAAGTTCTCTTTGCCTATA | + |
|
Preference number: 5 (lower is better) Translates to: AARKEYKLKLEYHSHAWWGGTGF*KFSLPI Trigger: TATAGGCAAAGAGAACTTCAAAAAACCAGTGCCTCC...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | GCAGCCAGAAAGGAGTACAAGTTAAAATTAGAGTACCATAGCCACGCCTGGTGGTCTCCTTGTGCCAACTaGAAAATATTCTTCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AARKEYKLKLEYHSHAWWSPCAN*KIFFFR Trigger: CCGGAAGAAGAATATTTTCAAGTTGGCACAAGGAGA...CCACCAGGCGTGGCTATGGTACTCTAATTTTAACTTGTACTCCTTTCTGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
||
| CDS-3UTR CAA 90 bp | ACAAAACATGGGATAGATTTTAGGCCATACTTCTGCAAGGCCTCGGAGCCCTCATGCACAAAGATACTTTaGACCTGCTCAAAGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TKHGIDFRPYFCKASEPSCTKIL*TCSKDF Trigger: GAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCA...TGAGGGCTCCGAGGCCTTGCAGAAGTATGGCCTAAAATCTATCCCATGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224414.2 |
||
| CDS-3UTR CAA 90 bp | TTGACATTTACAAGTAGAGGCACCACATGCTATCTGACAGTAAAATACTGCAGGATTTGTAGGGCTGGTTaGGCTTTCTGTATCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTFTSRGTTCYLTVKYCRICRAG*AFCIPS Trigger: GCTTGGGATACAGAAAGCCAAACCAGCCCTACAAAT...CCTGCAGTATTTTACTGTCAGATAGCATGTGGTGCCTCTACTTGTAAATGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | AGTGCTTTGTTCCCAACTCAGGACAGTACTTTAGTGCTTGCTTCATTTACTGGAATAGGCTCCAGAAATTaGAGGAAAGCAGCCATGTTT | + |
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Preference number: 5 (lower is better) Translates to: SALFPTQDSTLVLASFTGIGSRN*RKAAMF Trigger: AAACATGGCTGCTTTCCTCAAATTTCTGGAGCCTAT...TCCAGTAAATGAAGCAAGCACTAAAGTACTGTCCTGAGTTGGGAACAAAGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | TTGACATTTACAAGTAGAGGCACCACATGCTATCTGACAGTAAAATACTGCAGGAACACATTGTTACCTTaGATGCAGATCTCGCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LTFTSRGTTCYLTVKYCRNTLLP*MQISPS Trigger: CGAAGGCGAGATCTGCATCAAAGGTAACAATGTGTT...CCTGCAGTATTTTACTGTCAGATAGCATGTGGTGCCTCTACTTGTAAATGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATCCCTTTACCCCGATCTaGGCTGCAAATGAGGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SHHSSQDCRHNIISVIVYPFTPI*AANEGS Trigger: ACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGGG...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CCA 90 bp | TGTCAGACACAGCAAGTCCTCTTTGGAAATTTTCATACAACGTCTTaGCGTCTGAGAAGTAATAAAGGATTAGGTCATTGTTCTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: CQTQQVLFGNFHTTS*RLRSNKGLGHCSSG Trigger: TCCAGAAGAACAATGACCTAATCCTTTATTACTTCTCAGACGCCAAGACGTTGTATGAAAATTTCCAAAGAGGACTTGCTGTGTCTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225551.2 |
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| CDS-3UTR CAA 90 bp | TTGTACCAATGGTTATTTAATTTTGATACAGGTTCTCATTGTGTAACCCAGCCTCAACCGGATATCTCCTaGGAAGAACCCAATTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LYQWLFNFDTGSHCVTQPQPDIS*EEPNFA Trigger: GGCAAAATTGGGTTCTTCCAAGGAGATATCCGGTTG...AGGCTGGGTTACACAATGAGAACCTGTATCAAAATTAAATAACCATTGGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATACCTGTGCATTCTGTTaGGCCATAAGCTTCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: SHHSSQDCRHNIISVIVYTCAFC*AISFKH Trigger: GTGTTTGAAGCTTATGGCCAAACAGAATGCACAGGT...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATGGAAAGCAGCCATGTTaGAAACAACATTTTCATGGG | + |
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Preference number: 5 (lower is better) Translates to: SHHSSQDCRHNIISVIVYGKQPC*KQHFHG Trigger: CCCATGAAAATGTTGTTTCAAACATGGCTGCTTTCC...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS-3UTR CAA 90 bp | TCTCATCACAGTTCACAAGACTGCAGGCACAACATAATATCTGTAATAGTTTATTTTTTGAAGTTCTCTTaGCCTATATTCTCCGCATCA | + |
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Preference number: 5 (lower is better) Translates to: SHHSSQDCRHNIISVIVYFLKFS*PIFSAS Trigger: TGATGCGGAGAATATAGGCAAAGAGAACTTCAAAAA...ATAAACTATTACAGATATTATGTTGTGCCTGCAGTCTTGTGAACTGTGATGAGA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS GCA 72 bp | GACAGGAGCCCAGGTACTCTGGAAAGCGCCCCTCCGTaGTCCTCCCTCAATCCCCACAGACTGGTTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: DRSPGTLESAPP*SSLNPHRLVVQ Trigger: TTGGACAACCAGTCTGTGGGGATTGAGGGAGGAGCACGGAGGGGCGCTTTCCAGAGTACCTGGGCTCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS CCA 72 bp | ATATCCTTTATGCAAAAGACAGGAGCCCAGGTACTCTaGAAAGCGCCCCTCCGTGCTCCTCCCTCAATCCCC | + |
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Preference number: 6 (lower is better) Translates to: ISFMQKTGAQVL*KAPLRAPPSIP Trigger: GGGGATTGAGGGAGGAGCACGGAGGGGCGCTTTCCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS TCA 72 bp | CATAAGCTTCAAACACCCAACATCCCATTGCAGCCCTaGAGAATGTCAAGACTGGAGTGGAGATGGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: HKLQTPNIPLQP*RMSRLEWRWGR Trigger: CCGCCCCCATCTCCACTCCAGTCTTGACATTCTTCAGGGCTGCAATGGGATGTTGGGTGTTTGAAGCTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CCA 72 bp | AGCCACATCTTCCAGCTTTACAAAATTGCAAGCCACTaGAGTCCCAACATGACCTGCTGTCCAGTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SHIFQLYKIASH*SPNMTCCPVPR Trigger: CCTGGGGACTGGACAGCAGGTCATGTTGGGACTCCAGTGGCTTGCAATTTTGTAAAGCTGGAAGATGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS TCA 72 bp | GTTCCATTTGGAAGCCAGCGACCAATGTCCCCAGTGTaGAGCCATCCATCCTTGTCCAGTACTTCCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VPFGSQRPMSPV*SHPSLSSTSCV Trigger: AACACAGGAAGTACTGGACAAGGATGGATGGCTTCACACTGGGGACATTGGTCGCTGGCTTCCAAATGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CAA 90 bp | GCCTTTTGGGGTGTATCACAGATGACCACAGGGATATCAGCCCTGTaGATGACAAAGATGATGGCTTCTGTACCCAGCGTGTCATACAGG | + |
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Preference number: 6 (lower is better) Translates to: AFWGVSQMTTGISAL*MTKMMASVPSVSYR Trigger: CCTGTATGACACGCTGGGTACAGAAGCCATCATCTTTGTCATCAACAGGGCTGATATCCCTGTGGTCATCTGTGATACACCCCAAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS TCA 72 bp | GACTGGTTGTCCAAGTCAATGAGAGGTAAAACTGGCTaGGGTCTGTTGATCAGCCACAGGAAGATGGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: DWLSKSMRGKTG*GLLISHRKMAV Trigger: AACGGCCATCTTCCTGTGGCTGATCAACAGACCTCAGCCAGTTTTACCTCTCATTGACTTGGACAACCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043150.6 ENSMUST00000224337.2 ENSMUST00000225551.2 |
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| CDS CAA 90 bp | CTCGATCAGACACCTGTTTGTAGGAGATCCATTTGTAGGGCTGGTTaGGCTTTCTGTATCCCAAGCAAGGCCCATTGTCAGACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LDQTPVCRRSICRAG*AFCIPSKAHCQTQQ Trigger: TTGCTGTGTCTGACAATGGGCCTTGCTTGGGATACAGAAAGCCAAACCAGCCCTACAAATGGATCTCCTACAAACAGGTGTCTGATCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225551.2 |
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| CDS GCA 72 bp | AGTTCATGTCAGCCACATCTTCCAGCTTTACAAAATTaGAAGCCACTGGAGTCCCAACATGACCTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSCQPHLPALQN*KPLESQHDLLS Trigger: GGACAGCAGGTCATGTTGGGACTCCAGTGGCTTGCAATTTTGTAAAGCTGGAAGATGTGGCTGACATGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CCA 72 bp | CACCTGTTTGTAGGAGATCCATTTGTAGGGCTGGTTTaGCTTTCTGTATCCCAAGCAAGGCCCATTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLFVGDPFVGLV*LSVSQARPIVR Trigger: TCTGACAATGGGCCTTGCTTGGGATACAGAAAGCCAAACCAGCCCTACAAATGGATCTCCTACAAACAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043150.6 ENSMUST00000225454.2 ENSMUST00000225551.2 |
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| CDS CCA 72 bp | TGCACAGTTCTTCAAATGATCCCTTTACCCCGATCTTaGCTGCAAATGAGGGAAGTGAATCTGGGTCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CTVLQMIPLPRS*LQMREVNLGRE Trigger: TTCCCGACCCAGATTCACTTCCCTCATTTGCAGCCAAGATCGGGGTAAAGGGATCATTTGAAGAACTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CAA 72 bp | ACACCTGTTTGTAGGAGATCCATTTGTAGGGCTGGTTaGGCTTTCTGTATCCCAAGCAAGGCCCATTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: TPVCRRSICRAG*AFCIPSKAHCQ Trigger: CTGACAATGGGCCTTGCTTGGGATACAGAAAGCCAAACCAGCCCTACAAATGGATCTCCTACAAACAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043150.6 ENSMUST00000225454.2 ENSMUST00000225551.2 |
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| CDS CAA 72 bp | ACGCTCAGATCCTCTGGCTTCGGAGGCACTGGTTTTTaGAAGTTCTCTTTGCCTATATTCTCCGCATCATGC | + |
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Preference number: 6 (lower is better) Translates to: TLRSSGFGGTGF*KFSLPIFSASC Trigger: GCATGATGCGGAGAATATAGGCAAAGAGAACTTCAAAAAACCAGTGCCTCCGAAGCCAGAGGATCTGAGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CAA 90 bp | AAACAGATGACGCTCAGATCCTCTGGCTTCGGAGGCACTGGTTTTTaGAAGTTCTCTTTGCCTATATTCTCCGCATCATGCAGGGATAAC | + |
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Preference number: 6 (lower is better) Translates to: KQMTLRSSGFGGTGF*KFSLPIFSASCRDN Trigger: GTTATCCCTGCATGATGCGGAGAATATAGGCAAAGAGAACTTCAAAAAACCAGTGCCTCCGAAGCCAGAGGATCTGAGCGTCATCTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS TCA 72 bp | CAGGCTAACTCAGAGATGACCCACTCTGGCCTATTTTaGGCAAAGATGCCAACAAATTGGTCCTGTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: QANSEMTHSGLF*AKMPTNWSCDD Trigger: GTCATCACAGGACCAATTTGTTGGCATCTTTGCTCAAAATAGGCCAGAGTGGGTCATCTCTGAGTTAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS GCA 72 bp | TGTTTGGCCATAAGCTTCAAACACCCAACATCCCATTaGAGCCCTGAAGAATGTCAAGACTGGAGTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: CLAISFKHPTSH*SPEECQDWSGD Trigger: ATCTCCACTCCAGTCTTGACATTCTTCAGGGCTGCAATGGGATGTTGGGTGTTTGAAGCTTATGGCCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS GCA 72 bp | CCAACAAATTGGTCCTGTGATGACTTATATCCTTTATaGAAAAGACAGGAGCCCAGGTACTCTGGAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PTNWSCDDLYPL*KRQEPRYSGKR Trigger: GCGCTTTCCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATATAAGTCATCACAGGACCAATTTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224337.2 |
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| CDS CCA 72 bp | CGGTGTCAGAAGTCCGTTTTCAATAGTGAAGGGCTCTaGATGCACAAAGATACTTTTGACCTGCTCAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RCQKSVFNSEGL*MHKDTFDLLKG Trigger: TCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGAAAACGGACTTCTGACACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
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| CDS CAA 72 bp | TCAATAGTGAAGGGCTCTGGATGCACAAAGATACTTTaGACCTGCTCAAAGGATTTCAGGCCACCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SIVKGSGCTKIL*TCSKDFRPPSF Trigger: GAAAGAGGGTGGCCTGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
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| CDS CAA 90 bp | ATGGTCACATCATCAGAGGTGGGCTGGAAGATAGGCTCCAGAAATTaGAGGAAAGCAGCCATGTTTGAAACAACATTTTCATGGGTTAGC | + |
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Preference number: 6 (lower is better) Translates to: MVTSSEVGWKIGSRN*RKAAMFETTFSWVS Trigger: GCTAACCCATGAAAATGTTGTTTCAAACATGGCTGCTTTCCTCAAATTTCTGGAGCCTATCTTCCAGCCCACCTCTGATGATGTGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CAA 90 bp | AGTCCGTTTTCAATAGTGAAGGGCTCTGGATGCACAAAGATACTTTaGACCTGCTCAAAGGATTTCAGGCCACCCTCTTTCCCAATTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPFSIVKGSGCTKIL*TCSKDFRPPSFPIF Trigger: GAAAATTGGGAAAGAGGGTGGCCTGAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGAAAACGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
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| CDS GCA 72 bp | ATATCCTTTATGCAAAAGACAGGAGCCCAGGTACTCTaGTCGATCAGACACCTGTTTGTAGGAGATCCATTT | + |
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Preference number: 6 (lower is better) Translates to: ISFMQKTGAQVL*SIRHLFVGDPF Trigger: AAATGGATCTCCTACAAACAGGTGTCTGATCGAGCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225454.2 |
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| CDS GCA 72 bp | CCAACAAATTGGTCCTGTGATGACTTATATCCTTTATaGAAAAGACAGGAGCCCAGGTACTCTGCTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: PTNWSCDDLYPL*KRQEPRYSARS Trigger: TGATCGAGCAGAGTACCTGGGCTCCTGTCTTTTGCATAAAGGATATAAGTCATCACAGGACCAATTTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225454.2 |
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| CDS GCA 72 bp | GTCAGAAGTCCGTTTTCAATAGTGAAGGGCTCTGGATaGACAAAGATACTTTTGACCTGCTCAAAGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: VRSPFSIVKGSG*TKILLTCSKDF Trigger: GAAATCCTTTGAGCAGGTCAAAAGTATCTTTGTGCATCCAGAGCCCTTCACTATTGAAAACGGACTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000224414.2 |
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| CDS GCA 72 bp | TTTTTGAAGTTCTCTTTGCCTATATTCTCCGCATCATaGAGGGATAACATCTCAACTCCACACTTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLKFSLPIFSAS*RDNISTPHFSP Trigger: AGGAGAAAAGTGTGGAGTTGAGATGTTATCCCTGCATGATGCGGAGAATATAGGCAAAGAGAACTTCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CAA 90 bp | TTGTCCCACAAACTGTCCCGCCGAATGATGCCATTTTTCACTTCATaGAATTTACTGATGATAGCCAAGTTCAACAAGAACTTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LSHKLSRRMMPFFTS*NLLMIAKFNKNFFK Trigger: TTTGAAGAAGTTCTTGTTGAACTTGGCTATCATCAGTAAATTCAATGAAGTGAAAAATGGCATCATTCGGCGGGACAGTTTGTGGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043150.6 |
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| CDS CCA 72 bp | CAGCAAGTCCTCTTTGGAAATTTTCATACAACGTCTTaGCGTCTGAGAAGTAATAAAGGATTAGGTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: QQVLFGNFHTTS*RLRSNKGLGHC Trigger: ACAATGACCTAATCCTTTATTACTTCTCAGACGCCAAGACGTTGTATGAAAATTTCCAAAGAGGACTTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043150.6 ENSMUST00000225551.2 |
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