Pregenerated sensors for ACSL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031278Ensembl transcript IDs: ENSMUST00000033634.5, ENSMUST00000112903.8, ENSMUST00000112904.8, ENSMUST00000112907.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCACCTCCTGTGCAAATaGAAATCAGAGAGCCGCATT | + |
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Preference number: 2 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFHLLCK*KSESRI Trigger: AATGCGGCTCTCTGATTTCCATTTGCACAGGAGGTG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGAGGATTTCAAAGCCTaGTGGCGCTTCTGCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNEDFKA*WRFCFE Trigger: CTCAAAGCAGAAGCGCCACCAGGCTTTGAAATCCTC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAAAGGGAAATGTCTTTaGAATCTCAGCTTCACTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFKGKCL*NLSFTR Trigger: CCTAGTGAAGCTGAGATTGCAAAGACATTTCCCTTT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCACCTCCTGTGCAAATaGAAATCAGAGAGCCGCATT | + |
|
Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNHLLCK*KSESRI Trigger: AATGCGGCTCTCTGATTTCCATTTGCACAGGAGGTG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGAGGATTTCAAAGCCTaGTGGCGCTTCTGCTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVEDFKA*WRFCFE Trigger: CTCAAAGCAGAAGCGCCACCAGGCTTTGAAATCCTC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACACCTCCTGTGCAAATaGAAATCAGAGAGCCGCATT | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVHLLCK*KSESRI Trigger: AATGCGGCTCTCTGATTTCCATTTGCACAGGAGGTG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGAGATGGGAGTGGGTaGGGTGCAAGTATCTTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVGDGSG*GASILN Trigger: ATTTAAGATACTTGCACCCCACCCACTCCCATCTCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGTGGCGCTTCTGCTTTaGGTAGTGTTAATACATAAT | + |
|
Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNVALLL*VVLIHN Trigger: ATTATGTATTAACACTACTCAAAGCAGAAGCGCCAC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAAAGGGAAATGTCTTTaGAATCTCAGCTTCACTAGG | + |
|
Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNKGKCL*NLSFTR Trigger: CCTAGTGAAGCTGAGATTGCAAAGACATTTCCCTTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCTAACACATTCCCATTaGTCTCACTCAGTCTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNLTHSH*SHSVFN Trigger: GTTAAAGACTGAGTGAGACCAATGGGAATGTGTTAG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGAGGAAGTAGAAGCTaGATAGTAGTCTACTTGATA | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVGGSRS*IVVYLI Trigger: TATCAAGTAGACTACTATTCAGCTTCTACTTCCTCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAAAGGGAAATGTCTTTaGAATCTCAGCTTCACTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVKGKCL*NLSFTR Trigger: CCTAGTGAAGCTGAGATTGCAAAGACATTTCCCTTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACTAACACATTCCCATTaGTCTCACTCAGTCTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVLTHSH*SHSVFN Trigger: GTTAAAGACTGAGTGAGACCAATGGGAATGTGTTAG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR CAA 90 bp | CTGGCTTTAGTTCTCAGCTTCCCTTCATTACATTATGAGATATTTTaGGTAGGTGTGTGTTGTTTTAGTCTTAACTTCAGGCACTGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: LALVLSFPSLHYEIF*VGVCCFSLNFRHCN Trigger: ATTACAGTGCCTGAAGTTAAGACTAAAACAACACACACCTACCAAAAATATCTCATAATGTAATGAAGGGAAGCTGAGAACTAAAGCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAAAGGCTCTCTGAAATaGACACTACTGATCAACAAT | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVKGSLK*TLLINN Trigger: ATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTCCCTTCAAGATAAATaGTTGGAAGAGGATTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QNERLSEMHTTDQQSISNSLQDK*LEEDFK Trigger: TTTGAAATCCTCTTCCAACCATTTATCTTGAAGGGA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATCCCTTCAAGATAAATaGTTGGAAGAGGATTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NKETGFSLALDSMNLSSVSLQDK*LEEDFK Trigger: TTTGAAATCCTCTTCCAACCATTTATCTTGAAGGGA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACAAAAACCTTCGCTGTaGCTTATAACACCAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: NKETGFSLALDSMNLSSVQKPSL*LITPDD Trigger: ATCATCTGGTGTTATAAGCAACAGCGAAGGTTTTTG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR TCA 72 bp | GGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTaGGTAGTGTTAATACATAATTTTGTCATCATTATT | + |
|
Preference number: 3 (lower is better) Translates to: GRGFQSLVALLL*VVLIHNFVIII Trigger: AATAATGATGACAAAATTATGTATTAACACTACTCAAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| 3UTR-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGTCCCTTAACGTGTTaGGATTTTCATGAAGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: NKETGFSLALDSMNLSSVGPLTC*DFHEEL Trigger: TAATTCTTCATGAAAATCCAAACACGTTAAGGGACC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGTCAGCCCATATCCCTaGCCAATGGGGCAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFVSPYP*PMGQQK Trigger: CTTCTGCTGCCCCATTGGTCAGGGATATGGGCTGAC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCGCCAGACAGCATCATaGGGACATTCCCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFRQTAS*GHSLPA Trigger: TGCTGGGAGGGAATGTCCGCATGATGCTGTCTGGCG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGACAATGGCCATGTCTaGAGGGGTTGGTCTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFDNGHV*RGWSTW Trigger: CCAAGTAGACCAACCCCTTCAGACATGGCCATTGTC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAACGCTCAAGTTTTCTaGCTTGGCTCCCAGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFNAQVF*LGSQLL Trigger: GAGGAGCTGGGAGCCAAGCCAGAAAACTTGAGCGTT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGTGAGTCGAAGTGTGTaGCAGAGCGATATGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFVSRSV*QSDMDF Trigger: GAAGTCCATATCGCTCTGTCACACACTTCGACTCAC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGTCAGCCCATATCCCTaGCCAATGGGGCAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNVSPYP*PMGQQK Trigger: CTTCTGCTGCCCCATTGGTCAGGGATATGGGCTGAC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTGTTCCAGCACCACATaGTTCTGTCAGCCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFCSSTT*FCQPIS Trigger: GGATATGGGCTGACAGAATCATGTGGTGCTGGAACA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGGGATACGTTCACACTaGCCTGTCATTCCAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFGIRSH*PVIPAI Trigger: GATTGCTGGAATGACAGGCCAGTGTGAACGTATCCC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTCCCAGCTCCTCTACTaGTTGCATGCTGTGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFSQLLY*LHAVNF Trigger: GAAATTCACAGCATGCAATCAGTAGAGGAGCTGGGA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGTCAGCCCATATCCCTaGCCAATGGGGCAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVVSPYP*PMGQQK Trigger: CTTCTGCTGCCCCATTGGTCAGGGATATGGGCTGAC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAAAGCAAGTCTGTGCTaGAATCATCCACTCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFKASLC*NHPLCP Trigger: AGGGCAGAGTGGATGATTGCAGCACAGACTTGCTTT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACGCCAGACAGCATCATaGGGACATTCCCTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVRQTAS*GHSLPA Trigger: TGCTGGGAGGGAATGTCCGCATGATGCTGTCTGGCG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAGGGGTTGGTCTACTTaGAGGAACGCTCAAGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFRGWST*RNAQVF Trigger: GAAAACTTGAGCGTTCCTCCAAGTAGACCAACCCCT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGACAATGGCCATGTCTaGAGGGGTTGGTCTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNDNGHV*RGWSTW Trigger: CCAAGTAGACCAACCCCTTCAGACATGGCCATTGTC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGCCATAGGTAAAGCATaGTATCTCTGCTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFAIGKA*YLCCQF Trigger: GAACTGACAGCAGAGATATCATGCTTTACCTATGGC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGGCTTAACCGAACCTTaGTCGGAATTTCAAATCGCT | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFGLTEP*SEFQIA Trigger: AGCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCTTCCTTTTCAGCTTaGAGGCATCTGTTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPSFSA*RHLLPN Trigger: GTTTGGTAACAGATGCCTTCAAGCTGAAAAGGAAGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCTTAAAGCAAGTCTGTaGTGCAATCATCCACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFLKASL*CNHPLC Trigger: GCAGAGTGGATGATTGCAGCACAGACTTGCTTTAAG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCTCTACTGATTGCATaGTGTGAATTTCAAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPLLIA*CEFQAP Trigger: AGGGGCTTGAAATTCACAGCATGCAATCAGTAGAGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGGCAATGGTGTTCTTTaGTTTCAGTCCCAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFGNGVL*FQSQCS Trigger: ACTGCATTGGGACTGAAACCAAAGAACACCATTGCC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAACGCTCAAGTTTTCTaGCTTGGCTCCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNNAQVF*LGSQLL Trigger: GAGGAGCTGGGAGCCAAGCCAGAAAACTTGAGCGTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTTGATTTTGCTGGACTaGTCAGACAGTGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFLILLD*SDSVRG Trigger: ACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCTCCAGGGATGTCTATaGCAGCTAGTGAGTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNLQGCL*QLVSRS Trigger: ACTTCGACTCACTAGCTGTCATAGACATCCCTGGAG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACACTGATTGCATGCTGTaGATTTCAAGCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNTDCML*ISSPSG Trigger: CCCTGAGGGGCTTGAAATTCACAGCATGCAATCAGT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGACAATGGCCATGTCTaGAGGGGTTGGTCTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVDNGHV*RGWSTW Trigger: CCAAGTAGACCAACCCCTTCAGACATGGCCATTGTC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGCAATCAAATTGCTATaGTGCATCATCACTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFAIKLL*CIITPL Trigger: CAAGGGAGTGATGATGCATCATAGCAATTTGATTGC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTATAAATTCTATCCATaGTTTCCGGAACAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFYKFYP*FPEQRP Trigger: TGGCCGCTGTTCCGGAAATCATGGATAGAATTTATA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTTTATCCAGAGTATCTaGTCCAGGGATGTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFFIQSI*SRDVYD Trigger: GTCATAGACATCCCTGGAGCAGATACTCTGGATAAA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCCCTCAGGGTACTCTaGTCTATTGATAGTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPLRVL*SIDSLI Trigger: AATAAGACTATCAATAGAGCAGAGTACCCTGAGGGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCATGGCGGGATTATTaGAAATATCAACCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPWRDY*KYQPKI Trigger: GATCTTGGGTTGATATTTGCAATAATCCCGCCATGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTCAAGTTTTCTGGCTTaGCTCCCAGCTCCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNSSFLA*LPAPLL Trigger: CAGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAACGCTCAAGTTTTCTaGCTTGGCTCCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVNAQVF*LGSQLL Trigger: GAGGAGCTGGGAGCCAAGCCAGAAAACTTGAGCGTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAGGACTGGTCACTTTTaGCAAAAGCACAGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFRTGHF*QKHRCC Trigger: ACAACATCTGTGCTTTTGCCAAAAGTGACCAGTCCT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTATCGCTCCAATTTCATaGCATTTGCAGCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFIAPIS*HLQLLE Trigger: TTCGAGAAGCTGCAAATGCCATGAAATTGGAGCGAT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGTGAGTCGAAGTGTGTaGCAGAGCGATATGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVVSRSV*QSDMDF Trigger: GAAGTCCATATCGCTCTGTCACACACTTCGACTCAC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACTCCAGGGATGTCTATaGCAGCTAGTGAGTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVLQGCL*QLVSRS Trigger: ACTTCGACTCACTAGCTGTCATAGACATCCCTGGAG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAACTGATTGCATGCTGTaGATTTCAAGCCCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVTDCML*ISSPSG Trigger: CCCTGAGGGGCTTGAAATTCACAGCATGCAATCAGT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTCCCAGCTCCTCTACTaGTTGCATGCTGTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNSQLLY*LHAVNF Trigger: GAAATTCACAGCATGCAATCAGTAGAGGAGCTGGGA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAACCACTGGTGTACATaGCAATGGCCATGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNNHWCT*QWPCLK Trigger: CTTCAGACATGGCCATTGTCATGTACACCAGTGGTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAGAAGCAGACATTCATaGATCGGTGTGTCTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVRSRHS*IGVSEG Trigger: CCCCTCAGACACACCGATTCATGAATGTCTGCTTCT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATGTTCCAGCACCACATaGTTCTGTCAGCCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVCSSTT*FCQPIS Trigger: GGATATGGGCTGACAGAATCATGTGGTGCTGGAACA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAAAGCAAGTCTGTGCTaGAATCATCCACTCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNKASLC*NHPLCP Trigger: AGGGCAGAGTGGATGATTGCAGCACAGACTTGCTTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCTTCTTCCCAAATTTaGCTACAGCATGGTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPSSQI*LQHGQI Trigger: TATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATCAAGTTTTCTGGCTTaGCTCCCAGCTCCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVSSFLA*LPAPLL Trigger: CAGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAGGGGTTGGTCTACTTaGAGGAACGCTCAAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNRGWST*RNAQVF Trigger: GAAAACTTGAGCGTTCCTCCAAGTAGACCAACCCCT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGGATACGTTCACACTaGCCTGTCATTCCAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVGIRSH*PVIPAI Trigger: GATTGCTGGAATGACAGGCCAGTGTGAACGTATCCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATCAGTCCCAATGCAGTaGGGCCACTTCCAAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVSVPMQ*GHFQSY Trigger: ATAACTTTGGAAGTGGCCTCACTGCATTGGGACTGA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATCCCAGCTCCTCTACTaGTTGCATGCTGTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVSQLLY*LHAVNF Trigger: GAAATTCACAGCATGCAATCAGTAGAGGAGCTGGGA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAACCACTGGTGTACATaGCAATGGCCATGTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVNHWCT*QWPCLK Trigger: CTTCAGACATGGCCATTGTCATGTACACCAGTGGTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGCCATAGGTAAAGCATaGTATCTCTGCTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNAIGKA*YLCCQF Trigger: GAACTGACAGCAGAGATATCATGCTTTACCTATGGC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGGCTTAACCGAACCTTaGTCGGAATTTCAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNGLTEP*SEFQIA Trigger: AGCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCTTCCTTTTCAGCTTaGAGGCATCTGTTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNPSFSA*RHLLPN Trigger: GTTTGGTAACAGATGCCTTCAAGCTGAAAAGGAAGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCTTAAAGCAAGTCTGTaGTGCAATCATCCACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNLKASL*CNHPLC Trigger: GCAGAGTGGATGATTGCAGCACAGACTTGCTTTAAG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCTCTACTGATTGCATaGTGTGAATTTCAAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNPLLIA*CEFQAP Trigger: AGGGGCTTGAAATTCACAGCATGCAATCAGTAGAGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTTCCAGCAATCAAATTaGTATGATGCATCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFFQQSN*YDASSL Trigger: GAGTGATGATGCATCATAGCAATTTGATTGCTGGAA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGGCAATGGTGTTCTTTaGTTTCAGTCCCAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNGNGVL*FQSQCS Trigger: ACTGCATTGGGACTGAAACCAAAGAACACCATTGCC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTTGATTTTGCTGGACTaGTCAGACAGTGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNLILLD*SDSVRG Trigger: ACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAGAGTCAACTTTTTCTaGTTAGGAACCACAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFRVNFF*LGTTKL Trigger: CAGTTTTGTGGTTCCTAACCAGAAAAAGTTGACTCT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGCAATCAAATTGCTATaGTGCATCATCACTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNAIKLL*CIITPL Trigger: CAAGGGAGTGATGATGCATCATAGCAATTTGATTGC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGCCATAGGTAAAGCATaGTATCTCTGCTGTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVAIGKA*YLCCQF Trigger: GAACTGACAGCAGAGATATCATGCTTTACCTATGGC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTATAAATTCTATCCATaGTTTCCGGAACAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNYKFYP*FPEQRP Trigger: TGGCCGCTGTTCCGGAAATCATGGATAGAATTTATA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGCTTAACCGAACCTTaGTCGGAATTTCAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVGLTEP*SEFQIA Trigger: AGCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACCTTCCTTTTCAGCTTaGAGGCATCTGTTACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVPSFSA*RHLLPN Trigger: GTTTGGTAACAGATGCCTTCAAGCTGAAAAGGAAGG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTTTATCCAGAGTATCTaGTCCAGGGATGTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNFIQSI*SRDVYD Trigger: GTCATAGACATCCCTGGAGCAGATACTCTGGATAAA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACTTAAAGCAAGTCTGTaGTGCAATCATCCACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVLKASL*CNHPLC Trigger: GCAGAGTGGATGATTGCAGCACAGACTTGCTTTAAG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGAACTACAGCTTCTCTaGCAAGTGTGGCATATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNELQLL*QVWHIK Trigger: CTTTATATGCCACACTTGGCAGAGAAGCTGTAGTTC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCCCTCAGGGTACTCTaGTCTATTGATAGTCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNPLRVL*SIDSLI Trigger: AATAAGACTATCAATAGAGCAGAGTACCCTGAGGGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCATGGCGGGATTATTaGAAATATCAACCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNPWRDY*KYQPKI Trigger: GATCTTGGGTTGATATTTGCAATAATCCCGCCATGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATTGATTTTGCTGGACTaGTCAGACAGTGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVLILLD*SDSVRG Trigger: ACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACATCGCTCCAATTTCATaGCATTTGCAGCTTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNIAPIS*HLQLLE Trigger: TTCGAGAAGCTGCAAATGCCATGAAATTGGAGCGAT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATATAAATTCTATCCATaGTTTCCGGAACAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVYKFYP*FPEQRP Trigger: TGGCCGCTGTTCCGGAAATCATGGATAGAATTTATA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATTTATCCAGAGTATCTaGTCCAGGGATGTCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVFIQSI*SRDVYD Trigger: GTCATAGACATCCCTGGAGCAGATACTCTGGATAAA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGAACTACAGCTTCTCTaGCAAGTGTGGCATATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVELQLL*QVWHIK Trigger: CTTTATATGCCACACTTGGCAGAGAAGCTGTAGTTC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACCATGGCGGGATTATTaGAAATATCAACCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVPWRDY*KYQPKI Trigger: GATCTTGGGTTGATATTTGCAATAATCCCGCCATGG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCTTCTTCCCAAATTTaGCTACAGCATGGTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNPSSQI*LQHGQI Trigger: TATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACTTCTCTGCCAAGTGTaGCATATAAAGTCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVLLCQV*HIKSQV Trigger: CACTTGTGACTTTATATGCCACACTTGGCAGAGAAG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAGGACTGGTCACTTTTaGCAAAAGCACAGATGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVRTGHF*QKHRCC Trigger: ACAACATCTGTGCTTTTGCCAAAAGTGACCAGTCCT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTTCGCTCAATGTCTTTaGGATAATGGTTCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNFAQCL*DNGSST Trigger: AGTTGAAGAACCATTATCTCAAAGACATTGAGCGAA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAGAGTCAACTTTTTCTaGTTAGGAACCACAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNRVNFF*LGTTKL Trigger: CAGTTTTGTGGTTCCTAACCAGAAAAAGTTGACTCT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGTATTTCAGCTTCCATaGCGGGATTATTGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNVFQLP*RDYCKY Trigger: ATATTTGCAATAATCCCGCCATGGAAGCTGAAATAC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATTCGCTCAATGTCTTTaGGATAATGGTTCTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVFAQCL*DNGSST Trigger: AGTTGAAGAACCATTATCTCAAAGACATTGAGCGAA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCAAAGTTATTCACTCTaGAGTTCACTTCAAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNERLSEMHTTDQQSISNQSYSL*SSLQDS Trigger: ACTATCTTGAAGTGAACTGCAGAGTGAATAACTTTG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATTCCAGCAATCAAATTaGTATGATGCATCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVFQQSN*YDASSL Trigger: GAGTGATGATGCATCATAGCAATTTGATTGCTGGAA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAGAGTCAACTTTTTCTaGTTAGGAACCACAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVRVNFF*LGTTKL Trigger: CAGTTTTGTGGTTCCTAACCAGAAAAAGTTGACTCT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGTATTTCAGCTTCCATaGCGGGATTATTGCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVVFQLP*RDYCKY Trigger: ATATTTGCAATAATCCCGCCATGGAAGCTGAAATAC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACAAAGTTATTCACTCTaGAGTTCACTTCAAGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKETGFSLALDSMNLSSVQSYSL*SSLQDS Trigger: ACTATCTTGAAGTGAACTGCAGAGTGAATAACTTTG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| 3UTR CAA 72 bp | GTTCTCAGCTTCCCTTCATTACATTATGAGATATTTTaGGTAGGTGTGTGTTGTTTTAGTCTTAACTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSFPSLHYEIF*VGVCCFSLNFR Trigger: CCTGAAGTTAAGACTAAAACAACACACACCTACCAAAAATATCTCATAATGTAATGAAGGGAAGCTGAGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS TCA 90 bp | TGGAGGAACGCTCAAGTTTTCTGGCTTGGCTCCCAGCTCCTCTACTaGTTGCATGCTGTGAATTTCAAGCCCCTCAGGGTACTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRNAQVFWLGSQLLY*LHAVNFKPLRVLCS Trigger: AGAGCAGAGTACCCTGAGGGGCTTGAAATTCACAGCATGCAATCAGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGAGCGTTCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCCATGTCTGAAGGGGTaGGTCTACTTGGAGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFPCLKG*VYLEER Trigger: GCGTTCCTCCAAGTAGACCAACCCCTTCAGACATGG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CCA 90 bp | CACTCAGGATCTCCCGGGTTCCAAGGCTGTCCTTCTTCCCAAATTTaGCTACAGCATGGTCAAATAATTTATCCAGAGTATCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSGSPGFQGCPSSQI*LQHGQIIYPEYLLQ Trigger: CTGGAGCAGATACTCTGGATAAATTATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGGACAGCCTTGGAACCCGGGAGATCCTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CCA 90 bp | AATATCCCATGGAGATATTCTGGCCACCGATCACAATCTCACCTCTaGGGTTCGGCTTATCATGAACTGTATAACCACCTTCCTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NIPWRYSGHRSQSHL*GSAYHELYNHLPAS Trigger: ACTGGCAGGAAGGTGGTTATACAGTTCATGATAAGCCGAACCCCAGAGGTGAGATTGTGATCGGTGGCCAGAATATCTCCATGGGATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTCTCAAGTTTTCTGGCTaGGCTCCCAGCTCCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFLKFSG*APSSST Trigger: AGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGAG...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTGCATCATCACTCCCTaGGGGCGGCCCGTAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNCIITP*GRPVEP Trigger: TGGTTCTACGGGCCGCCCCAAGGGAGTGATGATGCA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAAGGCCGCCTTCAGTTaGCTTTCCAGAAGCTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFKAAFS*LSRSST Trigger: TGTTGAGCTTCTGGAAAGCAAACTGAAGGCGGCCTT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATGCATCATCACTCCCTaGGGGCGGCCCGTAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVCIITP*GRPVEP Trigger: TGGTTCTACGGGCCGCCCCAAGGGAGTGATGATGCA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTGGCAATGGTGTTCTTaGGTTTCAGTCCCAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFWQWCS*VSVPMQ Trigger: CTGCATTGGGACTGAAACCAAAGAACACCATTGCCA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTAAGGGGTTGGTCTACTaGGAGGAACGCTCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFKGLVY*EERSSF Trigger: AAAACTTGAGCGTTCCTCCAAGTAGACCAACCCCTT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCCATGTCTGAAGGGGTaGGTCTACTTGGAGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNPCLKG*VYLEER Trigger: GCGTTCCTCCAAGTAGACCAACCCCTTCAGACATGG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGGGCTTAACCGAACCTaGATCGGAATTTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFGLNRT*IGISNR Trigger: GCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCCC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACCTCAAGTTTTCTGGCTaGGCTCCCAGCTCCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNLKFSG*APSSST Trigger: AGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGAG...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACCATGTCTGAAGGGGTaGGTCTACTTGGAGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVPCLKG*VYLEER Trigger: GCGTTCCTCCAAGTAGACCAACCCCTTCAGACATGG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTTCTACCCCCTTCTGTaGTGCCAAAAGAGTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFFYPLL*CQKSQL Trigger: AAGTTGACTCTTTTGGCACAACAGAAGGGGGTAGAA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS GCA 90 bp | CTTCTCGAATTTCTTTCAGTATTTCAGCTTCCATGGCGGGATTATTaGAAATATCAACCCAAGATCCTTCTACCCCCTTCTGTTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLEFLSVFQLPWRDY*KYQPKILLPPSVVP Trigger: TGGCACAACAGAAGGGGGTAGAAGGATCTTGGGTTGATATTTGCAATAATCCCGCCATGGAAGCTGAAATACTGAAAGAAATTCGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CCA 90 bp | TGGCATTTGCAGCTTCTCGAATTTCTTTCAGTATTTCAGCTTCCATaGCGGGATTATTGCAAATATCAACCCAAGATCCTTCTACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WHLQLLEFLSVFQLP*RDYCKYQPKILLPP Trigger: AGGGGGTAGAAGGATCTTGGGTTGATATTTGCAATAATCCCGCCATGGAAGCTGAAATACTGAAAGAAATTCGAGAAGCTGCAAATGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTCCTTCTTCCCAAATTaGGCTACAGCATGGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFSFFPN*ATAWSN Trigger: ATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGGA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAAGGCCGCCTTCAGTTaGCTTTCCAGAAGCTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNKAAFS*LSRSST Trigger: TGTTGAGCTTCTGGAAAGCAAACTGAAGGCGGCCTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTACTCAAGTTTTCTGGCTaGGCTCCCAGCTCCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVLKFSG*APSSST Trigger: AGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGAG...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTTCCATGGCGGGATTATaGCAAATATCAACCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFSMAGL*QISTQD Trigger: ATCTTGGGTTGATATTTGCAATAATCCCGCCATGGA...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTATGGACTTCCAGGTTaGTCTGAAGTGGGCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNYGLPG*SEVGLA Trigger: AGCTAAGCCCACTTCAGACAAACCTGGAAGTCCATA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAAGGCCGCCTTCAGTTaGCTTTCCAGAAGCTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVKAAFS*LSRSST Trigger: TGTTGAGCTTCTGGAAAGCAAACTGAAGGCGGCCTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTGGGTACTCTGCTCTATaGATAGTCTTATTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFGYSAL*IVLLST Trigger: TGTGGATAATAAGACTATCAATAGAGCAGAGTACCC...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACAAGGGGTTGGTCTACTaGGAGGAACGCTCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNKGLVY*EERSSF Trigger: AAAACTTGAGCGTTCCTCCAAGTAGACCAACCCCTT...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGGGCTTAACCGAACCTaGATCGGAATTTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNGLNRT*IGISNR Trigger: GCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCCC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATATGGACTTCCAGGTTaGTCTGAAGTGGGCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVYGLPG*SEVGLA Trigger: AGCTAAGCCCACTTCAGACAAACCTGGAAGTCCATA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGATAAATGGTTGGAAGAGGATTTCAAAGCCTGGTGGCGCTTCTGCTTTATATGTTTAACACAATaGATATCTACTAAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQDKWLEEDFKAWWRFCFICLTQ*ISTKAA Trigger: GGCGGCCTTAGTAGATATCAATTGTGTTAAACATAT...AAAGCAGAAGCGCCACCAGGCTTTGAAATCCTCTTCCAACCATTTATCTTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAAAGGGGTTGGTCTACTaGGAGGAACGCTCAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVKGLVY*EERSSF Trigger: AAAACTTGAGCGTTCCTCCAAGTAGACCAACCCCTT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTTCTACCCCCTTCTGTaGTGCCAAAAGAGTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNFYPLL*CQKSQL Trigger: AAGTTGACTCTTTTGGCACAACAGAAGGGGGTAGAA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGGCTTAACCGAACCTaGATCGGAATTTCAAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVGLNRT*IGISNR Trigger: GCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTCCTTCTTCCCAAATTaGGCTACAGCATGGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNSFFPN*ATAWSN Trigger: ATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGGA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATTCTACCCCCTTCTGTaGTGCCAAAAGAGTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVFYPLL*CQKSQL Trigger: AAGTTGACTCTTTTGGCACAACAGAAGGGGGTAGAA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACTCCATGGCGGGATTATaGCAAATATCAACCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNSMAGL*QISTQD Trigger: ATCTTGGGTTGATATTTGCAATAATCCCGCCATGGA...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAAAGGCTCTCTGAAATGCACACTACTGATCAACAATCAATCAGCAACGGGTACTCTGCTCTATaGATAGTCTTATTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QNERLSEMHTTDQQSISNGYSAL*IVLLST Trigger: TGTGGATAATAAGACTATCAATAGAGCAGAGTACCC...GTTGCTGATTGATTGTTGATCAGTAGTGTGCATTTCAGAGAGCCTTTCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTATCCATGGCGGGATTATaGCAAATATCAACCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVSMAGL*QISTQD Trigger: ATCTTGGGTTGATATTTGCAATAATCCCGCCATGGA...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAGGGTACTCTGCTCTATaGATAGTCTTATTATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVGYSAL*IVLLST Trigger: TGTGGATAATAAGACTATCAATAGAGCAGAGTACCC...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAAACAGGATTCTCCCTCGCTTTGGACTCTATGAATCTTTCATCTGTAATATGTTTAACACAATaGATATCTACTAAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKETGFSLALDSMNLSSVICLTQ*ISTKAA Trigger: GGCGGCCTTAGTAGATATCAATTGTGTTAAACATAT...TACAGATGAAAGATTCATAGAGTCCAAAGCGAGGGAGAATCCTGTTTCTTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS GCA 72 bp | TCTGAGGGGACAGTGGCGCGCCGCCAGACAGCATCATaGGGACATTCCCTCCCAGCAGAGCCTTCACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SEGTVARRQTAS*GHSLPAEPSPF Trigger: AAAAGGTGAAGGCTCTGCTGGGAGGGAATGTCCGCATGATGCTGTCTGGCGGCGCGCCACTGTCCCCTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS TCA 72 bp | GCTCAAGTTTTCTGGCTTGGCTCCCAGCTCCTCTACTaGTTGCATGCTGTGAATTTCAAGCCCCTCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AQVFWLGSQLLY*LHAVNFKPLRV Trigger: TACCCTGAGGGGCTTGAAATTCACAGCATGCAATCAGTAGAGGAGCTGGGAGCCAAGCCAGAAAACTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 72 bp | GTCTCGGGGGTCCATGGCTCTGGGCTTAACCGAACCTaGATCGGAATTTCAAATCGCTCCAATTTCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSGVHGSGLNRT*IGISNRSNFMA Trigger: TGCCATGAAATTGGAGCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCCCAGAGCCATGGACCCCCGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS TCA 72 bp | GTTCCAGCACCACATGATTCTGTCAGCCCATATCCCTaGCCAATGGGGCAGCAGAAGCAGACATTCATGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VPAPHDSVSPYP*PMGQQKQTFMN Trigger: ATTCATGAATGTCTGCTTCTGCTGCCCCATTGGTCAGGGATATGGGCTGACAGAATCATGTGGTGCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS TCA 72 bp | TCTCGGGGGTCCATGGCTCTGGGCTTAACCGAACCTTaGTCGGAATTTCAAATCGCTCCAATTTCATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGSMALGLTEP*SEFQIAPISWH Trigger: ATGCCATGAAATTGGAGCGATTTGAAATTCCGATCAAGGTTCGGTTAAGCCCAGAGCCATGGACCCCCGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | GGAACAGCGGCCATAAGTGTGGGTTTCAGTACAGTACAATCACCCTaGCTTCCCTTCTTGATTTTGCTGGACTGGTCAGACAGTGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTAAISVGFSTVQSP*LPFLILLDWSDSVR Trigger: CCTTACACTGTCTGACCAGTCCAGCAAAATCAAGAAGGGAAGCAAGGGTGATTGTACTGTACTGAAACCCACACTTATGGCCGCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | TCACTCAGGATCTCCCGGGTTCCAAGGCTGTCCTTCTTCCCAAATTaGGCTACAGCATGGTCAAATAATTTATCCAGAGTATCTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLRISRVPRLSFFPN*ATAWSNNLSRVSAP Trigger: TGGAGCAGATACTCTGGATAAATTATTTGACCATGCTGTAGCCAAATTTGGGAAGAAGGACAGCCTTGGAACCCGGGAGATCCTGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | GTGGGTTTCAGTACAGTACAATCACCCTTGCTTCCCTTCTTGATTTaGCTGGACTGGTCAGACAGTGTAAGGGGTGAAGAGTATCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VGFSTVQSPLLPFLI*LDWSDSVRGEEYPI Trigger: GATTGGATACTCTTCACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAAGAAGGGAAGCAAGGGTGATTGTACTGTACTGAAACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 72 bp | GGTTTCAGTACAGTACAATCACCCTTGCTTCCCTTCTaGATTTTGCTGGACTGGTCAGACAGTGTAAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFSTVQSPLLPF*ILLDWSDSVRG Trigger: ACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAAGAAGGGAAGCAAGGGTGATTGTACTGTACTGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | GCTAGTGAGTCGAAGTGTGTGACAGAGCGATATGGACTTCCAGGTTaGTCTGAAGTGGGCTTAGCTTTTATTCTCTTTGCCATAGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASESKCVTERYGLPG*SEVGLAFILFAIAF Trigger: AAACGCTATGGCAAAGAGAATAAAAGCTAAGCCCACTTCAGACAAACCTGGAAGTCCATATCGCTCTGTCACACACTTCGACTCACTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033634.5 ENSMUST00000112907.8 |
||
| CDS CAA 72 bp | TCGAAGTGTGTGACAGAGCGATATGGACTTCCAGGTTaGTCTGAAGTGGGCTTAGCTTTTATTCTCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SKCVTERYGLPG*SEVGLAFILFA Trigger: GGCAAAGAGAATAAAAGCTAAGCCCACTTCAGACAAACCTGGAAGTCCATATCGCTCTGTCACACACTTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | ATAAGTGTGGGTTTCAGTACAGTACAATCACCCTTGCTTCCCTTCTaGATTTTGCTGGACTGGTCAGACAGTGTAAGGGGTGAAGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ISVGFSTVQSPLLPF*ILLDWSDSVRGEEY Trigger: ATACTCTTCACCCCTTACACTGTCTGACCAGTCCAGCAAAATCAAGAAGGGAAGCAAGGGTGATTGTACTGTACTGAAACCCACACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CAA 90 bp | GCTTCTCGAATTTCTTTCAGTATTTCAGCTTCCATGGCGGGATTATaGCAAATATCAACCCAAGATCCTTCTACCCCCTTCTGTTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRISFSISASMAGL*QISTQDPSTPFCCA Trigger: GGCACAACAGAAGGGGGTAGAAGGATCTTGGGTTGATATTTGCAATAATCCCGCCATGGAAGCTGAAATACTGAAAGAAATTCGAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
||
| CDS CCA 72 bp | CAGCTTCTCGAATTTCTTTCAGTATTTCAGCTTCCATaGCGGGATTATTGCAAATATCAACCCAAGATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLLEFLSVFQLP*RDYCKYQPKIL Trigger: AAGGATCTTGGGTTGATATTTGCAATAATCCCGCCATGGAAGCTGAAATACTGAAAGAAATTCGAGAAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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| CDS GCA 72 bp | TTGCATGCTGTGAATTTCAAGCCCCTCAGGGTACTCTaGTCTATTGATAGTCTTATTATCCACATAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: LHAVNFKPLRVL*SIDSLIIHIND Trigger: ATCATTTATGTGGATAATAAGACTATCAATAGAGCAGAGTACCCTGAGGGGCTTGAAATTCACAGCATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033634.5 ENSMUST00000112903.8 ENSMUST00000112904.8 ENSMUST00000112907.8 |
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