Pregenerated sensors for ACSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018796Ensembl transcript IDs: ENSMUST00000034046.13, ENSMUST00000110371.8, ENSMUST00000110372.9, ENSMUST00000130563.2, ENSMUST00000135955.8, ENSMUST00000152423.2, ENSMUST00000211644.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTaGTTCCACGAGGGAGCAGGTGGAGAGCGGTGGAGATGTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: GLLPRGSPVAITNMG*FHEGAGGERWRCHS Trigger: ACTGTGACATCTCCACCGCTCTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 90 bp | CCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTaGCCATTACCAACATGGGCTGCTTCCACGAGGGAGCAGGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVAVTNMGCFHEGAQ*PLPTWAASTREQVE Trigger: CTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 90 bp | CCAGGAAAACCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTaGTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: PGKPRGSPVAVTNMG*FHEGAQWPLPTWAA Trigger: AGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGGTTTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 90 bp | AACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATaGGCTGCTTCCACGAGGGAGCAGGTGGAGAGCGGTGGAGATGTC | + |
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Preference number: 1 (lower is better) Translates to: NMGCFHEGAQWPLPT*AASTREQVESGGDV Trigger: GACATCTCCACCGCTCTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 90 bp | ATTTGCCAGGAAAACCACGAGGGAGCCCAGTGGCCGTTACCAACATaGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGG | + |
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Preference number: 1 (lower is better) Translates to: ICQENHEGAQWPLPT*AASTREPSGHYQHG Trigger: CCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGGTTTTCCTGGCAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 90 bp | AATCACCGCATTATCATTTGCCAGGAAAACCACGAGGGAGCCCAGTaGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: NHRIIICQENHEGAQ*PLPTWAASTREPSG Trigger: GCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGGTTTTCCTGGCAAATGATAATGCGGTGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 90 bp | CTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCGAAGGCCATTaGTACGAGGAGGATTGTGGAGATGCGCCATTTCTTCTAAGTATC | + |
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Preference number: 1 (lower is better) Translates to: LSHTRCRQSYQLEGH*YEEDCGDAPFLLSI Trigger: GATACTTAGAAGAAATGGCGCATCTCCACAATCCTCCTCGTACCAATGGCCTTCGAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 90 bp | AGTGTTGGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGGGTaGACAGCAATGCCTTTGACCTGTTCAAATGGCTTCAGACCGGCT | + |
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Preference number: 1 (lower is better) Translates to: SVGVRRPLSIENNSG*TAMPLTCSNGFRPA Trigger: AGCCGGTCTGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCACCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
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| 3UTR CCA 90 bp | TTTACTGAAAACCTCATGTTCCAGCAGGCGCAAACAGGGACCGTGTaGAACCCTTACAAACCAGAAAGGTCATGTGAGTGTACTGTATGT | + |
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Preference number: 1 (lower is better) Translates to: FTENLMFQQAQTGTV*NPYKPERSCECTVC Trigger: ACATACAGTACACTCACATGACCTTTCTGGTTTGTAAGGGTTCCACACGGTCCCTGTTTGCGCCTGCTGGAACATGAGGTTTTCAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR TCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCTGTATGTGAGGTGGTaGGGGAAAGGGGCAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PRGSPVAVTNMGCFHEGALYVRW*GKGARG Trigger: CCCCCTTGCCCCTTTCCCTCACCACCTCACATACAG...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR GCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCTCCTCCAGTGTACGGTaGTCTTCAGAGCAGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: PRGSPVAVTNMGCFHEGASSSVR*SSEQQT Trigger: TGTCTGCTGCTCTGAAGAGCACCGTACACTGGAGGA...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGTGTCCCCGGGATCATaGGCTGCAACACAGGTGACT | + |
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Preference number: 2 (lower is better) Translates to: ASTREPSGHYQHGLLPRGVSPGS*AATQVT Trigger: AGTCACCTGTGTTGCAGCCCATGATCCCGGGGACAC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGATTTCTTATAACCCCTaGGACGAGGGGGAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: ASTREPSGHYQHGLLPRGISYNP*DEGEGG Trigger: GCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAAT...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATTCCTCCAGTGTACGGTaGTCTTCAGAGCAGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: GRISYNPWDEGEGGRRPDSSSVR*SSEQQT Trigger: TGTCTGCTGCTCTGAAGAGCACCGTACACTGGAGGA...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR TCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCTGCTCTTTAGTTTACTaGAAACCTCATGTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PRGSPVAVTNMGCFHEGACSLVY*KPHVPA Trigger: TGCTGGAACATGAGGTTTTCAGTAAACTAAAGAGCA...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATGGAGGATTGTGGAGATaGGCCATTTCTTCTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: GRISYNPWDEGEGGRRPDGGLWR*AISSKY Trigger: ATACTTAGAAGAAATGGCGCATCTCCACAATCCTCC...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CAA 90 bp | CGTAGCTCTGGCCTCTTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTaGTCAATAGAAAATAATTCCGGGTGCACAGCAATGCCTTTGACC | + |
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Preference number: 2 (lower is better) Translates to: RSSGLFAFSVGVRRP*SIENNSGCTAMPLT Trigger: GGTCAAAGGCATTGCTGTGCACCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAAGAGGCCAGAGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGTTCCGTAGCTCTGGCCTCTTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTGCACAGCAATGCCTTTaGCCTGTTCAAATGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NSSVALASSPSVLESEGRAQQCL*PVQMAS Trigger: TGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGC...ACGGCCTTCTGACTCCAACACTGAAGGCGAAGAGGCCAGAGCTACGGAACTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATCAAAAGGAAAACCTCTaGTCCACTGTGACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLPTWAASTREPSGHYQHQKENL*STVTFF Trigger: GAAGAAAGTCACAGTGGACCAGAGGTTTTCCTTTTG...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CAA 90 bp | CCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCGAAGGCCATaGGTACGAGGAGGATTGTGGAGATGCGCCATTTCTTCTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: PFPHSLQAKLPTRRP*VRGGLWRCAISSKY Trigger: ATACTTAGAAGAAATGGCGCATCTCCACAATCCTCCTCGTACCAATGGCCTTCGAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATAACTTAGCACTTTTATaGGTTCCCCTTTACAATGTT | + |
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Preference number: 2 (lower is better) Translates to: GRISYNPWDEGEGGRRPDNLALL*VPLYNV Trigger: AACATTGTAAAGGGGAACCCATAAAAGTGCTAAGTT...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGACAGAACTTGTAGCATCCACCTTATTGGTTGAAGAAGTCTTAAATAACGGAGGATTGTGGAGATaGGCCATTTCTTCTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: QETELVASTLLVEEVLNNGGLWR*AISSKY Trigger: ATACTTAGAAGAAATGGCGCATCTCCACAATCCTCC...GTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CAA 90 bp | CCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATaGGTTGAAGAAGTCTTAAATAACTTAGCACTTTTATGGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PQLEKQETELVASTL*VEEVLNNLALLWVP Trigger: GGGAACCCATAAAAGTGCTAAGTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 72 bp | CCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTaGTTCCACGAGGGAGCAGGTGGAGAGCGGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PRGSPVAITNMG*FHEGAGGERWR Trigger: TCTCCACCGCTCTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 72 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTaGTTCCACGAGGGAGCCCAGTGGCCATTACCAACA | + |
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Preference number: 3 (lower is better) Translates to: PRGSPVAVTNMG*FHEGAQWPLPT Trigger: TGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 72 bp | TGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATaGGCTGCTTCCACGAGGGAGCAGGTGGAGAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: CFHEGAQWPLPT*AASTREQVESG Trigger: ACCGCTCTCCACCTGCTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR CAA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCGTGGAGATGTCACAGTaGAGCATGGCCGCTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QHGLLPRGSPVAITNMGCVEMSQ*SMAAPG Trigger: CCCTGGAGCGGCCATGCTCAACTGTGACATCTCCAC...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 72 bp | TTCCGTGCCCTCGACTATCCCTATGGTAAGACCCCGTaGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: FRALDYPYGKTP*TSPAAGHFLSH Trigger: GTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 72 bp | GTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTaGCCATTACCAACATGGGCTGCTTCCACGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VTNMGCFHEGAQ*PLPTWAASTRE Trigger: CTCCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 72 bp | AGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTaGAGGCAAAGTTACCAACTCGAAGGCCATTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: SPAAGHFLSHTR*RQSYQLEGHWY Trigger: GTACCAATGGCCTTCGAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 72 bp | CTCCAGTGTACGGTGCTCTTCAGAGCAGCAGACAGCTaGAAAACGCGCAGCAAGCAGCAGACATATCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LQCTVLFRAADS*KTRSKQQTYQK Trigger: TTTCTGATATGTCTGCTGCTTGCTGCGCGTTTTGCAGCTGTCTGCTGCTCTGAAGAGCACCGTACACTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 72 bp | AAGGCTCGTTTTGGAAATTGTGTGTCCCCGGGATCATaGGCTGCAACACAGGTGACTGTAAGTAAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KARFGNCVSPGS*AATQVTVSKAV Trigger: CACTGCCTTACTTACAGTCACCTGTGTTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CCA 72 bp | AACCTCATGTTCCAGCAGGCGCAAACAGGGACCGTGTaGAACCCTTACAAACCAGAAAGGTCATGTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: NLMFQQAQTGTV*NPYKPERSCEC Trigger: ACACTCACATGACCTTTCTGGTTTGTAAGGGTTCCACACGGTCCCTGTTTGCGCCTGCTGGAACATGAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR TCA 72 bp | CCACATGTTCTGAAGAGGGTCTGCTCTTTAGTTTACTaGAAACCTCATGTTCCAGCAGGCGCAAACAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PHVLKRVCSLVY*KPHVPAGANRD Trigger: GTCCCTGTTTGCGCCTGCTGGAACATGAGGTTTTCAGTAAACTAAAGAGCAGACCCTCTTCAGAACATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGGTGGAGATGTCACAGTaGAGCATGGCCGCTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TVHFNKYPCISAPYIVLKVEMSQ*SMAAPG Trigger: CCCTGGAGCGGCCATGCTCAACTGTGACATCTCCAC...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR GCA 72 bp | GTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGGGTaGACAGCAATGCCTTTGACCTGTTCAAATGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: VRRPLSIENNSG*TAMPLTCSNGF Trigger: GAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCACCCGGAATTATTTTCTATTGACAACGGCCTTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
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| 3UTR GCA 72 bp | TATTACAATGATGATTCTTTAGTGCAAACCCAGTTGTaGTTCAATAACACACGCACTGTCACACAGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: YYNDDSLVQTQL*FNNTRTVTQPT Trigger: TGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAACTGGGTTTGCACTAAAGAATCATCATTGTAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGGTAGCATCCACCTTATaGGTTGAAGAAGTCTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: TVHFNKYPCISAPYIVLKVASTL*VEEVLN Trigger: ATTTAAGACTTCTTCAACCAATAAGGTGGATGCTAC...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCGCTCGGAGCAAGGCTTaGACCCCTTCTGGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGAARSKA*TPSGSA Trigger: GGCTGATCCAGAAGGGGTTCAAGCCTTGCTCCGAGC...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCATGGAGAGGTCACATaGTGGCTTCAGGGCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGAHGEVT*WLQGLR Trigger: CCTAAGGCCCTGAAGCCACCATGTGACCTCTCCATG...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCGCTCGGAGCAAGGCTTaGACCCCTTCTGGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCARSKA*TPSGSA Trigger: GGCTGATCCAGAAGGGGTTCAAGCCTTGCTCCGAGC...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | CCCTATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACGGGAAGATGGTGGGCTaGAGCACCTTGAGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: PYGKTPWTSPAAGHFLSHGKMVG*STLRSS Trigger: GGACGACCTCAAGGTGCTTCAGCCCACCATCTTCCC...GTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCGGGAAGATGGTGGGCTaGAGCACCTTGAGGTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCGKMVG*STLRSS Trigger: GGACGACCTCAAGGTGCTTCAGCCCACCATCTTCCC...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGGAGAGGTCACATGGTaGCTTCAGGGCCTTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGGEVTW*LQGLRP Trigger: AGGCCTAAGGCCCTGAAGCCACCATGTGACCTCTCC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCATGGGGGCTCCAACATaGCCTGCCGTCCAGTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLMGAPT*PAVQSP Trigger: CGGAGACTGGACGGCAGGCCATGTTGGAGCCCCCAT...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCTTCGCCTTCAGTGTTaGAGTCAGAAGGCCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGALRLQC*SQKAVV Trigger: GACAACGGCCTTCTGACTCCAACACTGAAGGCGAAG...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGCAGACACCGGGGCTaGTCCTGTGATCATCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHGRHRG*SCDHQP Trigger: CGGCTGATGATCACAGGAGCAGCCCCGGTGTCTGCC...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCGGCAGCAACCAGCAGTaGACTCGGTCTGTCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLGSNQQ*TRSVRS Trigger: GCTACGGACAGACCGAGTGCACTGCTGGTTGCTGCC...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCGGCTTCAGCTGTTCTTaGTGGGTCTTTCAAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGAGFSCS*WVFQVA Trigger: GGCTACTTGAAAGACCCAGCAAGAACAGCTGAAGCC...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATGAAACGTCAGCACTGTaGCAGACACCGGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRISYNPWDEGEGGRRPDETSAL*QTPGLL Trigger: GAGCAGCCCCGGTGTCTGCCACAGTGCTGACGTTTC...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCGAAACGTCAGCACTGTaGCAGACACCGGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLETSAL*QTPGLL Trigger: GAGCAGCCCCGGTGTCTGCCACAGTGCTGACGTTTC...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGTGCAAGCTTTCTCCGTaGACAAACACCTGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGCKLSP*TNTWAT Trigger: CGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCA...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCATACCAGAAGGTGGTaGGCGCTGCAAAAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCHTRRW*ALQKPQ Trigger: TTGGGGCTTTTGCAGCGCTCACCACCTTCTGGTATG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGACCCGCTATTTCCACTaGCTGCATGGAGAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGTRYFH*LHGEVT Trigger: TGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGT...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCGCTATTTCCACTGACTaGATGGAGAGGTCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGAAISTD*MERSHG Trigger: ACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGC...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGCAGCAACCAGCAGTaGACTCGGTCTGTCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHGSNQQ*TRSVRS Trigger: GCTACGGACAGACCGAGTGCACTGCTGGTTGCTGCC...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCACCCTCGCCCTTGGATaGCAGGTAATTCATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGATLALG*QVIHFF Trigger: GAAGAAATGAATTACCTGGCATCCAAGGGCGAGGGT...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCATGAGGGTGTTGGTTaGAAGGGTGCGCACGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCHEGVG*KGAHVL Trigger: CAGTACGTGCGCACCCTTCCAACCAACACCCTCATG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCATGGAGAGGTCACATaGTGGCTTCAGGGCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCHGEVT*WLQGLR Trigger: CCTAAGGCCCTGAAGCCACCATGTGACCTCTCCATG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCCATACCAGAAGGTGGTaGGCGCTGCAAAAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLHTRRW*ALQKPQ Trigger: TTGGGGCTTTTGCAGCGCTCACCACCTTCTGGTATG...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCACTCGGGTCTGTTTTaGGAGAAGAGGCCGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCHSGLF*EKRPMN Trigger: GTTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | CCCTATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACAGGCTGTTGTTTCTaGCGATGCCACTGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PYGKTPWTSPAAGHFLSHTGCCF*RCHCEA Trigger: AGCTTCGCAGTGGCATCGTCAGAAACAACAGCCTGT...GTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGCCTCACCCTCGCCCTTaGATGCCAGGTAATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGPHPRP*MPGNSF Trigger: AAATGAATTACCTGGCATCCAAGGGCGAGGGTGAGG...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCTTCAAGGTGCCATTTaGCAGCCATTTTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGSPVAVTNMGCFHEGALQGAI*QPFSNV Trigger: GACATTGGAAAATGGCTGCCAAATGGCACCTTGAAG...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATTGCAAGCTTTCTCCGTaGACAAACACCTGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GRISYNPWDEGEGGRRPDCKLSP*TNTWAT Trigger: CGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCA...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGCTATTTCCACTGACTaGATGGAGAGGTCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGAISTD*MERSHG Trigger: ACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR GCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATCCACCCCACACTTCTTaGCTCGTTCCACCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHPPHTS*LVPPDH Trigger: GTGATCTGGTGGAACGAGGCAAGAAGTGTGGGGTGG...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCCATAATTGCAAGGCATaGGGGCTCCAACATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLHNCKA*GLQHGL Trigger: CAGGCCATGTTGGAGCCCCCATGCCTTGCAATTATG...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGCCTATCTTAGCTCCATaGCACAGCATTACACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGPILAP*HSITHS Trigger: AGAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGG...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR GCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCGCACTCAGCCAGTTCTaGCACCTCTTTGTAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCALSQF*HLFVGN Trigger: ATTTCCTACAAAGAGGTGGCAGAACTGGCTGAGTGC...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR GCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTGGTGAGTGATCATTaGTCCTTTGGGGTTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCLVSDH*SFGVAC Trigger: ACAGGCAACCCCAAAGGAGCAATGATCACTCACCAA...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCTTTCCACTGACTGCATaGAGAGGTCACATGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLFPLTA*RGHMVA Trigger: AGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAA...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCAAGATCTTCGGGTTCTaGAGGCTTGGGCTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLKIFGF*RLGLHS Trigger: AGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTT...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCAAGATCTTCGGGTTCTaGAGGCTTGGGCTTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLKIFGF*RLGLHS Trigger: AGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTT...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATCCTCACCCTCGCCCTTaGATGCCAGGTAATTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRISYNPWDEGEGGRRPDPHPRP*MPGNSF Trigger: AAATGAATTACCTGGCATCCAAGGGCGAGGGTGAGG...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGTTTGACCTGTTCAAATaGCTTCAGACCGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGFDLFK*LQTGFL Trigger: AAGGAAGCCGGTCTGAAGCCATTTGAACAGGTCAAA...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATCCATTATTTGACACCTaGATCCCCCTCTGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHPLFDT*IPLWKP Trigger: TGGCTTCCAGAGGGGGATTCAGGTGTCAAATAATGG...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCGCACAGCAATGCCTTTaGCCTGTTCAAATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLAQQCL*PVQMAS Trigger: TGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGC...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CAATGTTTAAGGCTCGTTTTGGAAATTGTGTGTCCCCGGGATCATGGGCTGCAAGGCAGACACCGGGGCTaGTCCTGTGATCATCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCLRLVLEIVCPRDHGLQGRHRG*SCDHQP Trigger: CGGCTGATGATCACAGGAGCAGCCCCGGTGTCTGCC...TTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTTAAACATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | CCCTATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACCAAGCTTTACATAATTaGAAGGCATGGGGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYGKTPWTSPAAGHFLSHQALHN*KAWGLQ Trigger: TTGGAGCCCCCATGCCTTGCAATTATGTAAAGCTTG...GTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATTTTCCACTGACTGCATaGAGAGGTCACATGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHFPLTA*RGHMVA Trigger: AGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAA...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCTTCAAGGTGCCATTTaGCAGCCATTTTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLPRGSPVAITNMGCLQGAI*QPFSNV Trigger: GACATTGGAAAATGGCTGCCAAATGGCACCTTGAAG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGCAGTGTTCCGTGCCCTCGACTATCCCTATGGTAAGACCCCGTGGACACTTCGCCTTCAGTGTTaGAGTCAGAAGGCCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAVFRALDYPYGKTPWTLRLQC*SQKAVV Trigger: GACAACGGCCTTCTGACTCCAACACTGAAGGCGAAG...TGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAACACTGCCTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATCAAGCTTTACATAATTaGAAGGCATGGGGGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRISYNPWDEGEGGRRPDQALHN*KAWGLQ Trigger: TTGGAGCCCCCATGCCTTGCAATTATGTAAAGCTTG...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGCTATGTACTCTCCTTaGGCTAGTTTAAATATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTREPSGHYQHGLLPRGAMYSP*ASLNMC Trigger: GCACATATTTAAACTAGCCCAAGGAGAGTACATAGC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATCCGGGGCTGCTCCTGTaGTCATCAGCCGGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFNNTRTVTQPTTVASNPGLLL*SSAGLS Trigger: GGAAAGTCCGGCTGATGATCACAGGAGCAGCCCCGG...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGCAGTGTTCCGTGCCCTCGACTATCCCTATGGTAAGACCCCGTGGACACATCTATCTGCGACCTaGAATAGTTCCGTAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKAVFRALDYPYGKTPWTHLSAT*NSSVAL Trigger: CAGAGCTACGGAACTATTTCAGGTCGCAGATAGATG...TGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAACACTGCCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CAATGTTTAAGGCTCGTTTTGGAAATTGTGTGTCCCCGGGATCATGGGCTGCAAGGAGAGGTCACATGGTaGCTTCAGGGCCTTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRLVLEIVCPRDHGLQGEVTW*LQGLRP Trigger: AGGCCTAAGGCCCTGAAGCCACCATGTGACCTCTCC...TTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTTAAACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGGGTGCACAGCAATGCCTTGCAAGCTTTCTCCGTaGACAAACACCTGGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GVRRPLSIENNSGCTAMPCKLSP*TNTWAT Trigger: CGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCA...AGGCATTGCTGTGCACCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCCTTCAAGGAAGTGTTTaGTTGTCCAAAAATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLLQGSV*LSKNSV Trigger: GACAGAATTTTTGGACAAGCAAACACTTCCTTGAAG...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGAGTTTGGCTTTTTCTaGCTTGTCAGCAAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHEFGFF*LVSKNH Trigger: GTGATTTTTGCTGACAAGCCAGAAAAAGCCAAACTC...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCCTTCTAATAAGAGTTTaGCTTTTTCTGGCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVRPRGQVRRQGISFPTLLLIRV*LFLACQ Trigger: CTGACAAGCCAGAAAAAGCCAAACTCTTATTAGAAG...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGCAGTGTTCCGTGCCCTCGACTATCCCTATGGTAAGACCCCGTGGACATTCAGCTGTTCTTGCTaGGTCTTTCAAGTAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKAVFRALDYPYGKTPWTFSCSC*VFQVAF Trigger: AAAGGCTACTTGAAAGACCCAGCAAGAACAGCTGAA...TGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAACACTGCCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGCTATGTACTCTCCTTaGGCTAGTTTAAATATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTWAASTREPSGHYQHAMYSP*ASLNMC Trigger: GCACATATTTAAACTAGCCCAAGGAGAGTACATAGC...ATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTGGCTTGAACCCCTTCTaGATCAGCCCGGAGCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGGLNPF*ISPEPM Trigger: CATAGGCTCCGGGCTGATCCAGAAGGGGTTCAAGCC...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGTACACTCGGGTCTGTTTTaGGAGAAGAGGCCGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CFNNTRTVTQPTTVASNVHSGLF*EKRPMN Trigger: GTTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTG...TACATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATCATAATTGCAAGGCATaGGGGCTCCAACATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFNNTRTVTQPTTVASNHNCKA*GLQHGL Trigger: CAGGCCATGTTGGAGCCCCCATGCCTTGCAATTATG...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR TCA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGCCGGGGCTGCTCCTGTaGTCATCAGCCGGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVHFNKYPCISAPYIVLKPGLLL*SSAGLS Trigger: GGAAAGTCCGGCTGATGATCACAGGAGCAGCCCCGG...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGGCTTCAGCTGTTCTTaGTGGGTCTTTCAAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCFNNTRTVTQPTTVASNGFSCS*WVFQVA Trigger: GGCTACTTGAAAGACCCAGCAAGAACAGCTGAAGCC...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR CCA 90 bp | CAATGTTTAAGGCTCGTTTTGGAAATTGTGTGTCCCCGGGATCATGGGCTGCAATTTGACCTGTTCAAATaGCTTCAGACCGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCLRLVLEIVCPRDHGLQFDLFK*LQTGFL Trigger: AAGGAAGCCGGTCTGAAGCCATTTGAACAGGTCAAA...TTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTTAAACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGTACCACAACTGCTATaGGAAAGGCCTGCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFNNTRTVTQPTTVASNVPQLL*ERPASF Trigger: AAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTAC...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGTATTGGTGAGTGATCATTaGTCCTTTGGGGTTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFNNTRTVTQPTTVASNVLVSDH*SFGVAC Trigger: ACAGGCAACCCCAAAGGAGCAATGATCACTCACCAA...TACATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR CCA 90 bp | TTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGGGCTTCAAGGTGCCATTTaGCAGCCATTTTCCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FAFSVGVRRPLSIENNSGLQGAI*QPFSNV Trigger: GACATTGGAAAATGGCTGCCAAATGGCACCTTGAAG...CCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAGACAGAACTTGTAGCATCCACCTTATTGGTTGAAGAAGTCTTAAATAACACAGGCTGTTGTTTCTaGCGATGCCACTGCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QETELVASTLLVEEVLNNTGCCF*RCHCEA Trigger: AGCTTCGCAGTGGCATCGTCAGAAACAACAGCCTGT...GTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTGTACCACAACTGCTATaGGAAAGGCCTGCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGVPQLL*ERPASF Trigger: AAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTAC...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTGCACAGCAATGCCTTTaGCCTGTTCAAATGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGAQQCL*PVQMAS Trigger: TGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGC...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTACCCTCGCCCTTGGATaGCAGGTAATTCATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGTLALG*QVIHFF Trigger: GAAGAAATGAATTACCTGGCATCCAAGGGCGAGGGT...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGGGCTTGAACCCCTTCTaGATCAGCCCGGAGCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TVHFNKYPCISAPYIVLKGLNPF*ISPEPM Trigger: CATAGGCTCCGGGCTGATCCAGAAGGGGTTCAAGCC...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR TCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTCCTATCTTAGCTCCATaGCACAGCATTACACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGPILAP*HSITHS Trigger: AGAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGG...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGCCACCCCACACTTCTTaGCTCGTTCCACCAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVHFNKYPCISAPYIVLKPPHTS*LVPPDH Trigger: GTGATCTGGTGGAACGAGGCAAGAAGTGTGGGGTGG...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR TCA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGACCCGCTATTTCCACTaGCTGCATGGAGAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVHFNKYPCISAPYIVLKTRYFH*LHGEVT Trigger: TGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGT...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS-3UTR CCA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGAGTTTGGCTTTTTCTaGCTTGTCAGCAAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCFNNTRTVTQPTTVASNEFGFF*LVSKNH Trigger: GTGATTTTTGCTGACAAGCCAGAAAAAGCCAAACTC...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
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| CDS-3UTR CCA 90 bp | CTCTTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGCTATGTACTCTCCTTaGGCTAGTTTAAATATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFAFSVGVRRPLSIENNSAMYSP*ASLNMC Trigger: GCACATATTTAAACTAGCCCAAGGAGAGTACATAGC...GGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS-3UTR GCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTCTTCAAGGAAGTGTTTaGTTGTCCAAAAATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGLQGSV*LSKNSV Trigger: GACAGAATTTTTGGACAAGCAAACACTTCCTTGAAG...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | AACCCCTCAGTTAGAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATTGGTCTTCTAATAAGAGTTTaGCTTTTTCTGGCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSVRKTGDRTCSIHLIGLLIRV*LFLACQ Trigger: CTGACAAGCCAGAAAAAGCCAAACTCTTATTAGAAG...ACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGTTCAGCTGTTCTTGCTaGGTCTTTCAAGTAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVHFNKYPCISAPYIVLKFSCSC*VFQVAF Trigger: AAAGGCTACTTGAAAGACCCAGCAAGAACAGCTGAA...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| 3UTR CAA 72 bp | GAAAAACAGGAGACAGAACTTGTAGCATCCACCTTATaGGTTGAAGAAGTCTTAAATAACTTAGCACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EKQETELVASTL*VEEVLNNLALL Trigger: TAAAAGTGCTAAGTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTGTTTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS GCA 90 bp | GGCCTGCCGTCCAGTCTCCGGGCAAGCTCAGGCAGCAACCAGCAGTaGACTCGGTCTGTCCGTAGCCTTCATAGAACTGGCAGCCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLPSSLRASSGSNQQ*TRSVRSLHRTGSRA Trigger: CGCTCGGCTGCCAGTTCTATGAAGGCTACGGACAGACCGAGTGCACTGCTGGTTGCTGCCTGAGCTTGCCCGGAGACTGGACGGCAGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS GCA 90 bp | GAGCGCTGTCCTCAGAAACGTCAGCACTGTGGCAGACACCGGGGCTaGTCCTGTGATCATCAGCCGGACTTTCCCACCCAGGCTCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: ERCPQKRQHCGRHRG*SCDHQPDFPTQARL Trigger: CAGTCGAGCCTGGGTGGGAAAGTCCGGCTGATGATCACAGGAGCAGCCCCGGTGTCTGCCACAGTGCTGACGTTTCTGAGGACAGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCCCACTCGGGTCTGTTTaGAGAGAAGAGGCCGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRGSPVAVTNMGCFHEGAPLGSV*REEADE Trigger: TTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTGG...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGTCCACCCCACACTTCTaGCCTCGTTCCACCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASTREPSGHYQHGLLPRGSTPHF*PRSTRS Trigger: TGATCTGGTGGAACGAGGCAAGAAGTGTGGGGTGGA...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCTTATCCCACAGGCTGTaGTTTCTGACGATGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PRGSPVAVTNMGCFHEGALSHRL*FLTMPL Trigger: CAGTGGCATCGTCAGAAACAACAGCCTGTGGGATAA...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS CCA 90 bp | GAGAAGAGGCCGATGAACTGCTCGGAGCAAGGCTTGAACCCCTTCTaGATCAGCCCGGAGCCTATGCACTCAGCCAGTTCTGCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EKRPMNCSEQGLNPF*ISPEPMHSASSATS Trigger: AGAGGTGGCAGAACTGGCTGAGTGCATAGGCTCCGGGCTGATCCAGAAGGGGTTCAAGCCTTGCTCCGAGCAGTTCATCGGCCTCTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS TCA 90 bp | GTGCCCAGGACGGTAGGCTCTCAACGTCGGGTACCACAACTGCTATaGGAAAGGCCTGCAAGCTTTCTCCGTGGACAAACACCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPRTVGSQRRVPQLL*ERPASFLRGQTPGP Trigger: TGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTACCCGACGTTGAGAGCCTACCGTCCTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATTCGGGTTCTGGAGGCTaGGGCTTCACTCTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRISYNPWDEGEGGRRPDSGSGG*GFTLFT Trigger: AGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGA...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCTCGGGTTCTGGAGGCTaGGGCTTCACTCTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: MVRPRGQVRRQGISFPTLSGSGG*GFTLFT Trigger: AGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGA...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTCCGCCTCTTTCCTTTaGGAGGCAAAGTCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHGLLPRGSPVAITNMGCSASFL*EAKSNS Trigger: GCTGTTGGACTTTGCCTCCAAAAGGAAAGAGGCGGA...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCCTATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACTCCGCCTCTTTCCTTTaGGAGGCAAAGTCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PYGKTPWTSPAAGHFLSHSASFL*EAKSNS Trigger: GCTGTTGGACTTTGCCTCCAAAAGGAAAGAGGCGGA...GTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGTTATCCCACAGGCTGTaGTTTCTGACGATGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASTREPSGHYQHGLLPRGLSHRL*FLTMPL Trigger: CAGTGGCATCGTCAGAAACAACAGCCTGTGGGATAA...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS GCA 90 bp | GGTAGGCTCTCAACGTCGGGTACCACAACTGCTATGAGAAAGGCCTaGAAGCTTTCTCCGTGGACAAACACCTGGGCCACGGCTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSTSGTTTAMRKA*KLSPWTNTWATASL Trigger: GAGTGAAGCCGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTACCCGACGTTGAGAGCCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCACGAGGGAGCCCAGTGGCCGTTACCAACATGGGCTGCTTCCACGAGGGAGCCTCCAGGATAGCTTTATaGATATCCTTGTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRGSPVAVTNMGCFHEGASRIAL*ISLFLH Trigger: GTGCAGGAACAAGGATATCAATAAAGCTATCCTGGA...GGCTCCCTCGTGGAAGCAGCCCATGTTGGTAACGGCCACTGGGCTCCCTCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATATTGCTCCTTTGGGGTaGCCTGTAGTTCCACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRISYNPWDEGEGGRRPDIAPLG*PVVPLV Trigger: CACAAGTGGAACTACAGGCAACCCCAAAGGAGCAAT...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCGTGATCATTGCTCCTTaGGGGTTGCCTGTAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLVIIAP*GLPVVP Trigger: TGGAACTACAGGCAACCCCAAAGGAGCAATGATCAC...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTGCACAGCAATGCCTTaGACCTGTTCAAATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHGLLPRGSPVAITNMGCCTAMP*TCSNGF Trigger: GAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCA...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS GCA 90 bp | GCTGATCTTCGAATACCATCAGTGGTACCCGCTATTTCCACTGACTaGATGGAGAGGTCACATGGTGGCTTCAGGGCCTTAGGCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADLRIPSVVPAISTD*MERSHGGFRALGLV Trigger: CACCAGGCCTAAGGCCCTGAAGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCGAAGATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
||
| CDS GCA 90 bp | GAACCCCTTCTGGATCAGCCCGGAGCCTATGCACTCAGCCAGTTCTaGCACCTCTTTGTAGGAAATCCACTCATAGGGCTGGTTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPLLDQPGAYALSQF*HLFVGNPLIGLVWL Trigger: AAGCCAAACCAGCCCTATGAGTGGATTTCCTACAAAGAGGTGGCAGAACTGGCTGAGTGCATAGGCTCCGGGCTGATCCAGAAGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGCTTTATTGATATCCTaGTTCCTGCACAGTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ASTREPSGHYQHGLLPRGALLIS*FLHSSS Trigger: CGAAGAACTGTGCAGGAACAAGGATATCAATAAAGC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGGGAGTCAGAAGGCCGTaGTCAATAGAAAATAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASTREPSGHYQHGLLPRGGVRRP*SIENNS Trigger: GGAATTATTTTCTATTGACAACGGCCTTCTGACTCC...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCTTCCACGAGGGCAAGGAAGTGTTTGCTaGTCCAAAAATTCTGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASTREPSGHYQHGLLPRGQGSVC*SKNSVE Trigger: TTCGACAGAATTTTTGGACAAGCAAACACTTCCTTG...CCCTCGTGGAAGCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCCCTTCTAATAAGAGTTaGGCTTTTTCTGGCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QHGLLPRGSPVAITNMGCPSNKS*AFSGLS Trigger: TGACAAGCCAGAAAAAGCCAAACTCTTATTAGAAGG...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCCAGCCTGATATCTCCTaGGAAAAATCCTATCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MVRPRGQVRRQGISFPTLQPDIS*EKSYLS Trigger: GCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTG...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCCAGCCTGATATCTCCTaGGAAAAATCCTATCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLQPDIS*EKSYLS Trigger: GCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTG...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTTTATTGATATCCTaGTTCCTGCACAGTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: MVRPRGQVRRQGISFPTLALLIS*FLHSSS Trigger: CGAAGAACTGTGCAGGAACAAGGATATCAATAAAGC...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CCGGCGGCAGGGCATTTCCTTTCCCACACTCGCTGCAGGCAAAGTTACCAACTCTCCAGGATAGCTTTATaGATATCCTTGTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGHFLSHTRCRQSYQLSRIAL*ISLFLH Trigger: GTGCAGGAACAAGGATATCAATAAAGCTATCCTGGA...GAGTTGGTAACTTTGCCTGCAGCGAGTGTGGGAAAGGAAATGCCCTGCCGCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS GCA 90 bp | ATGCCAGGTAATTCATTTCTTCCACATCCACAAGCTTTACATAATTaGAAGGCATGGGGGCTCCAACATGGCCTGCCGTCCAGTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MPGNSFLPHPQALHN*KAWGLQHGLPSSLR Trigger: CCGGAGACTGGACGGCAGGCCATGTTGGAGCCCCCATGCCTTGCAATTATGTAAAGCTTGTGGATGTGGAAGAAATGAATTACCTGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGCTGCTTCCACGAGGGAGCCCAGTGGCCATTACCAACATGGGCTGCAGGCATGGTGTTAACTaGTTTTCTACACCTTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QHGLLPRGSPVAITNMGCRHGVN*FSTPSN Trigger: ATTAGAAGGTGTAGAAAACAAGTTAACACCATGCCT...GCAGCCCATGTTGGTAATGGCCACTGGGCTCCCTCGTGGAAGCAGCCCATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGGATTTCTTATAACCCCTGGGACGAGGGGGAGGGAGGCAGGAGACCAGATGCTTCAAGGAAGTGTTaGCTTGTCCAAAAATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRISYNPWDEGEGGRRPDASRKC*LVQKFC Trigger: ACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGC...ATCTGGTCTCCTGCCTCCCTCCCCCTCGTCCCAGGGGTTATAAGAAATCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGCAGTGTTCCGTGCCCTCGACTATCCCTATGGTAAGACCCCGTGGACAAGGCTCGACTGTATCTaGTGGAAGATGAGTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SKAVFRALDYPYGKTPWTRLDCI*WKMSLS Trigger: GGATAAACTCATCTTCCACAAGATACAGTCGAGCCT...TGTCCACGGGGTCTTACCATAGGGATAGTCGAGGGCACGGAACACTGCCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS GCA 90 bp | CCTTTTGGAGGCAAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTTaGTTGTCCAAAAATTCTGTCGAACATCCGGTTCAGCAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PFGGKVQQPSLQGSV*LSKNSVEHPVQQPG Trigger: CCCAGGCTGCTGAACCGGATGTTCGACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTTGCCTCCAAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAATGTTTAAGGCTCGTTTTGGAAATTGTGTGTCCCCGGGATCATGGGCTGCAAGCGGGACGACCACCATaGAGTAAGAGAAGCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QCLRLVLEIVCPRDHGLQAGRPP*SKRSIL Trigger: AAGGATGCTTCTCTTACTCAATGGTGGTCGTCCCGC...TTGCAGCCCATGATCCCGGGGACACACAATTTCCAAAACGAGCCTTAAACATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTAAGACCCCGTGGACAAGTCCGGCGGCAGGGCATTTCCTTTCCCACACTCAGGCATGGTGTTAACTaGTTTTCTACACCTTCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: MVRPRGQVRRQGISFPTLRHGVN*FSTPSN Trigger: ATTAGAAGGTGTAGAAAACAAGTTAACACCATGCCT...GAGTGTGGGAAAGGAAATGCCCTGCCGCCGGACTTGTCCACGGGGTCTTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS CCA 90 bp | AGAGCTTGTCATCTTCAAGGACTGCTGATCTTCGAATACCATCAGTaGTACCCGCTATTTCCACTGACTGCATGGAGAGGTCACATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RACHLQGLLIFEYHQ*YPLFPLTAWRGHMV Trigger: CACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCGAAGATCAGCAGTCCTTGAAGATGACAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
||
| CDS CCA 90 bp | TGTAGTTCCACTTGTGAAACAAATTATCGCAAGATCTTCGGGTTCTaGAGGCTTGGGCTTCACTCTGTTCACTCTTCCAAGGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSTCETNYRKIFGF*RLGLHSVHSSKVLQ Trigger: CTGGAGGACCTTGGAAGAGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTTGCGATAATTTGTTTCACAAGTGGAACTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATCCACTCGGGTCTGTTTaGAGAGAAGAGGCCGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCFNNTRTVTQPTTVASNPLGSV*REEADE Trigger: TTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTGG...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGCGGGACGACCACCATaGAGTAAGAGAAGCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCFNNTRTVTQPTTVASNAGRPP*SKRSIL Trigger: AAGGATGCTTCTCTTACTCAATGGTGGTCGTCCCGC...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS TCA 90 bp | TATTTGACACCTGAATCCCCCTCTGGAAGCCATCGTACATGGTTCTaGCATCGTCGTAGTAGTACACCAAGAGCTTGTCATCTTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLTPESPSGSHRTWF*HRRSSTPRACHLQG Trigger: TCCTTGAAGATGACAAGCTCTTGGTGTACTACTACGACGATGTCAGAACCATGTACGATGGCTTCCAGAGGGGGATTCAGGTGTCAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000135955.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATATTGCTCCTTTGGGGTaGCCTGTAGTTCCACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCFNNTRTVTQPTTVASNIAPLG*PVVPLV Trigger: CACAAGTGGAACTACAGGCAACCCCAAAGGAGCAAT...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTCAATAACACACGCACTGTCACACAGCCAACAACAGTGGCTTCAAATGTGATCATTGCTCCTTaGGGGTTGCCTGTAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCFNNTRTVTQPTTVASNVIIAP*GLPVVP Trigger: TGGAACTACAGGCAACCCCAAAGGAGCAATGATCAC...ATTTGAAGCCACTGTTGTTGGCTGTGTGACAGTGCGTGTGTTATTGAAGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034046.13 |
||
| CDS TCA 90 bp | ATAAGCAGCCTGATATCTCCTTGGAAAAATCCTATCTTAGCTCCATaGCACAGCATTACACACTGGAGCTGCTGCTCATACATGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLISPWKNPILAP*HSITHWSCCSYMCA Trigger: GGCACACATGTATGAGCAGCAGCTCCAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTGCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110371.8 |
||
| CDS-3UTR CAA 90 bp | TTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCGGGGCTTTATTGATATCCTaGTTCCTGCACAGTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FAFSVGVRRPLSIENNSGALLIS*FLHSSS Trigger: CGAAGAACTGTGCAGGAACAAGGATATCAATAAAGC...CCCGGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGTCCACCCCACACTTCTaGCCTCGTTCCACCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVHFNKYPCISAPYIVLKSTPHF*PRSTRS Trigger: TGATCTGGTGGAACGAGGCAAGAAGTGTGGGGTGGA...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCGCCTTCAGTGTTGGAGTCAGAAGGCCGTTGTCAATAGAAAATAATTCCTCCAGGATAGCTTTATaGATATCCTTGTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFAFSVGVRRPLSIENNSSRIAL*ISLFLH Trigger: GTGCAGGAACAAGGATATCAATAAAGCTATCCTGGA...GGAATTATTTTCTATTGACAACGGCCTTCTGACTCCAACACTGAAGGCGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGTGCACAGCAATGCCTTaGACCTGTTCAAATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVHFNKYPCISAPYIVLKCTAMP*TCSNGF Trigger: GAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCA...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | CAGGAGACAGAACTTGTAGCATCCACCTTATTGGTTGAAGAAGTCTTAAATAACGCTTCAAGGAAGTGTTaGCTTGTCCAAAAATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QETELVASTLLVEEVLNNASRKC*LVQKFC Trigger: ACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGC...GTTATTTAAGACTTCTTCAACCAATAAGGTGGATGCTACAAGTTCTGTCTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGGGAGTCAGAAGGCCGTaGTCAATAGAAAATAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVHFNKYPCISAPYIVLKGVRRP*SIENNS Trigger: GGAATTATTTTCTATTGACAACGGCCTTCTGACTCC...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTCCATTTTAATAAGTACCCATGTATATCAGCTCCCTACATAGTTTTGAAGCAAGGAAGTGTTTGCTaGTCCAAAAATTCTGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVHFNKYPCISAPYIVLKQGSVC*SKNSVE Trigger: TTCGACAGAATTTTTGGACAAGCAAACACTTCCTTG...CTTCAAAACTATGTAGGGAGCTGATATACATGGGTACTTATTAAAATGGACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
||
| CDS GCA 72 bp | TCCAGTCTCCGGGCAAGCTCAGGCAGCAACCAGCAGTaGACTCGGTCTGTCCGTAGCCTTCATAGAACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLRASSGSNQQ*TRSVRSLHRTG Trigger: GCCAGTTCTATGAAGGCTACGGACAGACCGAGTGCACTGCTGGTTGCTGCCTGAGCTTGCCCGGAGACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS CCA 72 bp | CTCAACGTCGGGTACCACAACTGCAAGCTTTCTCCGTaGACAAACACCTGGGCCACGGCTTCACTCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNVGYHNCKLSP*TNTWATASLRR Trigger: CCTGCGGAGTGAAGCCGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGTTGTGGTACCCGACGTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152423.2 |
||
| CDS CCA 72 bp | CCGATGAACTGCTCGGAGCAAGGCTTGAACCCCTTCTaGATCAGCCCGGAGCCTATGCACTCAGCCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PMNCSEQGLNPF*ISPEPMHSASS Trigger: AGAACTGGCTGAGTGCATAGGCTCCGGGCTGATCCAGAAGGGGTTCAAGCCTTGCTCCGAGCAGTTCATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS CCA 72 bp | ACAACTGCTATGAGAAAGGCCTGCAAGCTTTCTCCGTaGACAAACACCTGGGCCACGGCTTCACTCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTAMRKACKLSP*TNTWATASLRR Trigger: CCTGCGGAGTGAAGCCGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS CAA 72 bp | GCATCCTTGCTCGACGATCACCCACTCGGGTCTGTTTaGAGAGAAGAGGCCGATGAACTGCTCGGAGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASLLDDHPLGSV*REEADELLGAR Trigger: CCTTGCTCCGAGCAGTTCATCGGCCTCTTCTCTCAAAACAGACCCGAGTGGGTGATCGTCGAGCAAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS GCA 72 bp | CTGGATCAGCCCGGAGCCTATGCACTCAGCCAGTTCTaGCACCTCTTTGTAGGAAATCCACTCATAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LDQPGAYALSQF*HLFVGNPLIGL Trigger: CAGCCCTATGAGTGGATTTCCTACAAAGAGGTGGCAGAACTGGCTGAGTGCATAGGCTCCGGGCTGATCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS GCA 72 bp | TCAACGTCGGGTACCACAACTGCTATGAGAAAGGCCTaGAAGCTTTCTCCGTGGACAAACACCTGGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: STSGTTTAMRKA*KLSPWTNTWAT Trigger: CGTGGCCCAGGTGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTACCCGACGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS CCA 72 bp | CTTCCACATCCACAAGCTTTACATAATTGCAAGGCATaGGGGCTCCAACATGGCCTGCCGTCCAGTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPHPQALHNCKA*GLQHGLPSSLR Trigger: CCGGAGACTGGACGGCAGGCCATGTTGGAGCCCCCATGCCTTGCAATTATGTAAAGCTTGTGGATGTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
||
| CDS CAA 90 bp | GGCTTGGGCTTCACTCTGTTCACTCTTCCAAGGTCCTCCAGAGCTTaGAGGCTGATGATTTCCACCCCACACTTCTTGCCTCGTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GLGFTLFTLPRSSRA*RLMISTPHFLPRST Trigger: GGTGGAACGAGGCAAGAAGTGTGGGGTGGAAATCATCAGCCTCAAAGCTCTGGAGGACCTTGGAAGAGTGAACAGAGTGAAGCCCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS TCA 72 bp | TCTTCGAATACCATCAGTGGTACCCGCTATTTCCACTaGCTGCATGGAGAGGTCACATGGTGGCTTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSNTISGTRYFH*LHGEVTWWLQG Trigger: GCCCTGAAGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
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| CDS TCA 72 bp | ACGGTAGGCTCTCAACGTCGGGTACCACAACTGCTATaGGAAAGGCCTGCAAGCTTTCTCCGTGGACAAACA | + |
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Preference number: 6 (lower is better) Translates to: TVGSQRRVPQLL*ERPASFLRGQT Trigger: TGTTTGTCCACGGAGAAAGCTTGCAGGCCTTTCTCATAGCAGTTGTGGTACCCGACGTTGAGAGCCTACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS GCA 72 bp | CCCATGAGGGTGTTGGTTGGAAGGGTGCGCACGTACTaGCGAATGTCAATCAGCTCTGGCATTCGAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: PMRVLVGRVRTY*RMSISSGIRKY Trigger: GTATTTTCGAATGCCAGAGCTGATTGACATTCGGCAGTACGTGCGCACCCTTCCAACCAACACCCTCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
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| CDS GCA 72 bp | CGAATACCATCAGTGGTACCCGCTATTTCCACTGACTaGATGGAGAGGTCACATGGTGGCTTCAGGGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: RIPSVVPAISTD*MERSHGGFRAL Trigger: TAAGGCCCTGAAGCCACCATGTGACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
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| CDS CAA 90 bp | CTGTTGTTTCTGACGATGCCACTGCGAAGCTCCGCCTCTTTCCTTTaGGAGGCAAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLFLTMPLRSSASFL*EAKSNSHRFKEVFA Trigger: AGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTTGCCTCCAAAAGGAAAGAGGCGGAGCTTCGCAGTGGCATCGTCAGAAACAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS GCA 72 bp | TGCCCCTTTCACACACACCTCACCCTCGCCCTTGGATaGCAGGTAATTCATTTCTTCCACATCCACAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: CPFHTHLTLALG*QVIHFFHIHKL Trigger: AAGCTTGTGGATGTGGAAGAAATGAATTACCTGGCATCCAAGGGCGAGGGTGAGGTGTGTGTGAAAGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 90 bp | AGGCTCGACTGTATCTTGTGGAAGATGAGTTTATCCCACAGGCTGTaGTTTCTGACGATGCCACTGCGAAGCTCCGCCTCTTTCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: RLDCILWKMSLSHRL*FLTMPLRSSASFLL Trigger: CAAAAGGAAAGAGGCGGAGCTTCGCAGTGGCATCGTCAGAAACAACAGCCTGTGGGATAAACTCATCTTCCACAAGATACAGTCGAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS TCA 72 bp | CCTGAATCCCCCTCTGGAAGCCATCGTACATGGTTCTaGCATCGTCGTAGTAGTACACCAAGAGCTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PESPSGSHRTWF*HRRSSTPRACH Trigger: ATGACAAGCTCTTGGTGTACTACTACGACGATGTCAGAACCATGTACGATGGCTTCCAGAGGGGGATTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000135955.8 |
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| CDS CCA 72 bp | CATTTGCCCCTTTCACACACACCTCACCCTCGCCCTTaGATGCCAGGTAATTCATTTCTTCCACATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: HLPLSHTPHPRP*MPGNSFLPHPQ Trigger: TTGTGGATGTGGAAGAAATGAATTACCTGGCATCCAAGGGCGAGGGTGAGGTGTGTGTGAAAGGGGCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CCA 72 bp | TTCCGGGTGCACAGCAATGCCTTTGACCTGTTCAAATaGCTTCAGACCGGCTTCCTTCCCAAGTTTCAACAA | + |
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Preference number: 6 (lower is better) Translates to: FRVHSNAFDLFK*LQTGFLPKFQQ Trigger: TTGTTGAAACTTGGGAAGGAAGCCGGTCTGAAGCCATTTGAACAGGTCAAAGGCATTGCTGTGCACCCGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 72 bp | TTCACTCTGTTCACTCTTCCAAGGTCCTCCAGAGCTTaGAGGCTGATGATTTCCACCCCACACTTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: FTLFTLPRSSRA*RLMISTPHFLP Trigger: AGGCAAGAAGTGTGGGGTGGAAATCATCAGCCTCAAAGCTCTGGAGGACCTTGGAAGAGTGAACAGAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 90 bp | CCACTTGTGAAACAAATTATCGCAAGATCTTCGGGTTCTGGAGGCTaGGGCTTCACTCTGTTCACTCTTCCAAGGTCCTCCAGAGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PLVKQIIARSSGSGG*GFTLFTLPRSSRAL Trigger: CAAAGCTCTGGAGGACCTTGGAAGAGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTTGCGATAATTTGTTTCACAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 90 bp | TCCTTTTGGAGGCAAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTaGCTTGTCCAAAAATTCTGTCGAACATCCGGTTCAGCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFWRQSPTAIASRKC*LVQKFCRTSGSAAW Trigger: CCAGGCTGCTGAACCGGATGTTCGACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTTGCCTCCAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CCA 72 bp | AAGGGTGCGCACGTACTGCCGAATGTCAATCAGCTCTaGCATTCGAAAATACCGGAACAATTCATGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: KGAHVLPNVNQL*HSKIPEQFMDF Trigger: GAAGTCCATGAATTGTTCCGGTATTTTCGAATGCCAGAGCTGATTGACATTCGGCAGTACGTGCGCACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
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| CDS CCA 72 bp | CATCTTCAAGGACTGCTGATCTTCGAATACCATCAGTaGTACCCGCTATTTCCACTGACTGCATGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: HLQGLLIFEYHQ*YPLFPLTAWRG Trigger: ACCTCTCCATGCAGTCAGTGGAAATAGCGGGTACCACTGATGGTATTCGAAGATCAGCAGTCCTTGAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000130563.2 ENSMUST00000135955.8 |
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| CDS CAA 72 bp | AAACAAATTATCGCAAGATCTTCGGGTTCTGGAGGCTaGGGCTTCACTCTGTTCACTCTTCCAAGGTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KQIIARSSGSGG*GFTLFTLPRSS Trigger: GGAGGACCTTGGAAGAGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTTGCGATAATTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 90 bp | GGGCTGAAGCACCTTGAGGTCGTCCATAAGCAGCCTGATATCTCCTaGGAAAAATCCTATCTTAGCTCCATGACACAGCATTACACACTC | + |
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Preference number: 6 (lower is better) Translates to: GLKHLEVVHKQPDIS*EKSYLSSMTQHYTL Trigger: GAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTGCTTATGGACGACCTCAAGGTGCTTCAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034046.13 ENSMUST00000110372.9 |
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| CDS CAA 90 bp | GGGCTGAAGCACCTTGAGGTCGTCCATAAGCAGCCTGATATCTCCTaGGAAAAATCCTATCTTAGCTCCATGACACAGCATTACACACTG | + |
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Preference number: 6 (lower is better) Translates to: GLKHLEVVHKQPDIS*EKSYLSSMTQHYTL Trigger: CAGTGTGTAATGCTGTGTCATGGAGCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTGCTTATGGACGACCTCAAGGTGCTTCAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110371.8 |
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| CDS CAA 90 bp | CCAGTTCTGCCACCTCTTTGTAGGAAATCCACTCATAGGGCTGGTTaGGCTTCCGAGAACCTAAACAAGGACCATTATTTGACACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PVLPPLCRKSTHRAG*ASENLNKDHYLTPE Trigger: TTCAGGTGTCAAATAATGGTCCTTGTTTAGGTTCTCGGAAGCCAAACCAGCCCTATGAGTGGATTTCCTACAAAGAGGTGGCAGAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 ENSMUST00000135955.8 |
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| CDS CAA 90 bp | CCAGTTCTGCCACCTCTTTGTAGGAAATCCACTCATAGGGCTGGTTaGGCTTCCGAGAACCTAAACAAGGACCATTATATGGTTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: PVLPPLCRKSTHRAG*ASENLNKDHYMVLT Trigger: TGTCAGAACCATATAATGGTCCTTGTTTAGGTTCTCGGAAGCCAAACCAGCCCTATGAGTGGATTTCCTACAAAGAGGTGGCAGAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211644.2 |
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| CDS GCA 72 bp | GGCAAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTTaGTTGTCCAAAAATTCTGTCGAACATCCGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKVQQPSLQGSV*LSKNSVEHPVQ Trigger: CTGAACCGGATGTTCGACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CCA 72 bp | ACTTGTGAAACAAATTATCGCAAGATCTTCGGGTTCTaGAGGCTTGGGCTTCACTCTGTTCACTCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TCETNYRKIFGF*RLGLHSVHSSK Trigger: CTTGGAAGAGTGAACAGAGTGAAGCCCAAGCCTCCAGAACCCGAAGATCTTGCGATAATTTGTTTCACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 72 bp | CACCTTGAGGTCGTCCATAAGCAGCCTGATATCTCCTaGGAAAAATCCTATCTTAGCTCCATGACACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLEVVHKQPDIS*EKSYLSSMTQH Trigger: ATGCTGTGTCATGGAGCTAAGATAGGATTTTTCCAAGGAGATATCAGGCTGCTTATGGACGACCTCAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 72 bp | AAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTTGCTaGTCCAAAAATTCTGTCGAACATCCGGTTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KVQQPSLQGSVC*SKNSVEHPVQQ Trigger: CTGCTGAACCGGATGTTCGACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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| CDS CAA 72 bp | AGGCAAAGTCCAACAGCCATCGCTTCAAGGAAGTGTTaGCTTGTCCAAAAATTCTGTCGAACATCCGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RQSPTAIASRKC*LVQKFCRTSGS Trigger: TGAACCGGATGTTCGACAGAATTTTTGGACAAGCAAACACTTCCTTGAAGCGATGGCTGTTGGACTTTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034046.13 ENSMUST00000110371.8 ENSMUST00000110372.9 |
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