Pregenerated sensors for ACSF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015016Ensembl transcript IDs: ENSMUST00000015160.6, ENSMUST00000212781.2, ENSMUST00000212790.2
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTaGGAGGCACTCAGGCAGTCCTCAGGGCTGCGAAGCCCAGGCCAT | + |
Preference number: 1 (lower is better) Translates to: HRPRQSQALGGPAVR*EALRQSSGLRSPGH Trigger: ATGGCCTGGGCTTCGCAGCCCTGAGGACTGCCTGAGTGCCTCGCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR CCA 90 bp | GGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTaGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACAC | + |
Preference number: 1 (lower is better) Translates to: GTCPQERQQPRALES*PQPCPYCACETGTH Trigger: GTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTaGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTG | + |
Preference number: 1 (lower is better) Translates to: DSLGPALRRGSSPGH*RAGHSRVLTVLVRL Trigger: CAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 90 bp | CCGGGCACTGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTaGGACTGGCACACACCAGTGATCTCAAGGACCACTGAGGACACA | + |
Preference number: 1 (lower is better) Translates to: PGTGELATAVSLLCL*DWHTPVISRTTEDT Trigger: TGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 90 bp | GGTGTGTCTTTATTTCACCTCTTCTCACTGTCACCTCTGACTCTCTaGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAG | + |
Preference number: 1 (lower is better) Translates to: GVSLFHLFSLSPLTL*DLPSGEAAAPGTGE Trigger: CTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGGTGAAATAAAGACACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 90 bp | AAACCCCCAAGATCTACAAGAACCAGGGAGAATCCGTCCCTGCCCTaGGTTAAGAAGGGAGCTGTGGGCACAGGCCCAGGCAATCCCAGG | + |
Preference number: 1 (lower is better) Translates to: KPPRSTRTRENPSLP*VKKGAVGTGPGNPR Trigger: CCTGGGATTGCCTGGGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGACGGATTCTCCCTGGTTCTTGTAGATCTTGGGGGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR TCA 90 bp | CCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTaGTCTCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACC | + |
Preference number: 1 (lower is better) Translates to: PQPCPYCACETGTHQ*SQGPLRTQPVVRVT Trigger: GGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 90 bp | CACTACACGGTGTGTCTTTATTTCACCTCTTCTCACTGTCACCTCTaGCTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCA | + |
Preference number: 1 (lower is better) Translates to: HYTVCLYFTSSHCHL*LSGTCPQERQQPRA Trigger: TGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGGTGAAATAAAGACACACCGTGTAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 90 bp | ACTGTGCTTGTGAGACTGGCACACACCAGTGATCTCAAGGACCACTaGGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCA | + |
Preference number: 1 (lower is better) Translates to: TVLVRLAHTSDLKDH*GHSQWSGSPGLGQS Trigger: TGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTCTCACAAGCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 90 bp | AGAGGCAGGCGGATCTCTGAGTTGGAGGCCACCTGGTGTACAGAGTaGGTTCCAGGACAACCAGGGCTACAGAGAAACCCTGTCTCAACA | + |
Preference number: 1 (lower is better) Translates to: RGRRISELEATWCTE*VPGQPGLQRNPVST Trigger: TGTTGAGACAGGGTTTCTCTGTAGCCCTGGTTGTCCTGGAACTCACTCTGTACACCAGGTGGCCTCCAACTCAGAGATCCGCCTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR TCA 90 bp | ACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACTTGGTaGTTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTGCAGG | + |
Preference number: 1 (lower is better) Translates to: TWAWTISLGLRELTW*FVPRGFDSGQPDCR Trigger: CCTGCAATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR-3UTR TCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCGATCTCAAGGACCACTaGGGACACAGCCAGTGGTCA | + |
Preference number: 2 (lower is better) Translates to: PLLTVTSDSLGPALRRGSDLKDH*GHSQWS Trigger: TGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATC...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR-3UTR GCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTCCGGTCAACCTGATTaGAGGAGGGGAGGGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: ESWPQPCPYCACETGTHQSGQPD*RRGGVP Trigger: TGGAACCCCTCCCCTCCTGCAATCAGGTTGACCGGA...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR-3UTR GCA 90 bp | GACTGGCACACACCAGTGATCTCAAGGACCACTGAGGACACAGCCAGTGGTCAGTCCGGTCAACCTGATTaGAGGAGGGGAGGGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: DWHTPVISRTTEDTASGQSGQPD*RRGGVP Trigger: TGGAACCCCTCCCCTCCTGCAATCAGGTTGACCGGA...CTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CAA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTaGGACAATCAGCCTGGGGTTGAGGGAACTCACTTGGTGATTCGT | + |
Preference number: 2 (lower is better) Translates to: SRTTEDTASGQGHLG*DNQPGVEGTHLVIR Trigger: ACGAATCACCAAGTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 72 bp | GGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTaGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTT | + |
Preference number: 3 (lower is better) Translates to: GPALRRGSSPGH*RAGHSRVLTVL Trigger: AAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR GCA 72 bp | GCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTaGAGTAAGGTGCGAGGCACTCAGGCAGTCCTCAGG | + |
Preference number: 3 (lower is better) Translates to: AQAQAIPGFGRP*SKVRGTQAVLR Trigger: CCTGAGGACTGCCTGAGTGCCTCGCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR GCA 72 bp | AGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTaGGAGGCACTCAGGCAGTCCTCAGGGCTGCGAAGC | + |
Preference number: 3 (lower is better) Translates to: RQSQALGGPAVR*EALRQSSGLRS Trigger: GCTTCGCAGCCCTGAGGACTGCCTGAGTGCCTCGCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR CCA 72 bp | CCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTaGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACT | + |
Preference number: 3 (lower is better) Translates to: PQERQQPRALES*PQPCPYCACET Trigger: AGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 72 bp | AGAATCCGTCCCTGCCCTGGGTTAAGAAGGGAGCTGTaGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: RIRPCPGLRREL*AQAQAIPGFGR Trigger: CCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGACGGATTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR CCA 72 bp | GGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTaGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTC | + |
Preference number: 3 (lower is better) Translates to: GPLRTQPVVRVT*AWTISLGLREL Trigger: GAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR GCA 72 bp | CCCCAAGATCTACAAGAACCAGGGAGAATCCGTCCCTaGCCTGGGTTAAGAAGGGAGCTGTGGGCACAGGCC | + |
Preference number: 3 (lower is better) Translates to: PQDLQEPGRIRP*PGLRRELWAQA Trigger: GGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGACGGATTCTCCCTGGTTCTTGTAGATCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR CCA 72 bp | CTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTaGACAATCAGCCTGGGGTTGAGGGAACTCACTTGG | + |
Preference number: 3 (lower is better) Translates to: LRTQPVVRVTWA*TISLGLRELTW Trigger: CCAAGTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CCA 72 bp | TTATTTCACCTCTTCTCACTGTCACCTCTGACTCTCTaGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGC | + |
Preference number: 3 (lower is better) Translates to: LFHLFSLSPLTL*DLPSGEAAAPG Trigger: GCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGGTGAAATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 72 bp | GTGAGACTGGCACACACCAGTGATCTCAAGGACCACTaGGGACACAGCCAGTGGTCAGGGTCACCTGGGCTT | + |
Preference number: 3 (lower is better) Translates to: VRLAHTSDLKDH*GHSQWSGSPGL Trigger: AAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 72 bp | CGGATCTCTGAGTTGGAGGCCACCTGGTGTACAGAGTaGGTTCCAGGACAACCAGGGCTACAGAGAAACCCT | + |
Preference number: 3 (lower is better) Translates to: RISELEATWCTE*VPGQPGLQRNP Trigger: AGGGTTTCTCTGTAGCCCTGGTTGTCCTGGAACTCACTCTGTACACCAGGTGGCCTCCAACTCAGAGATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR TCA 72 bp | ATCATAGCACTTGAGGAGCAGAGGCAGGCGGATCTCTaGGTTGGAGGCCACCTGGTGTACAGAGTGAGTTCC | + |
Preference number: 3 (lower is better) Translates to: IIALEEQRQADL*VGGHLVYRVSS Trigger: GGAACTCACTCTGTACACCAGGTGGCCTCCAACTCAGAGATCCGCCTGCCTCTGCTCCTCAAGTGCTATGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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3UTR TCA 72 bp | TGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTaGTCTCAAGGACCACTGAGGACACAGCCAGTGGTC | + |
Preference number: 3 (lower is better) Translates to: CPYCACETGTHQ*SQGPLRTQPVV Trigger: GACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR TCA 72 bp | TGGACAATCAGCCTGGGGTTGAGGGAACTCACTTGGTaGTTCGTCCCTAGAGGTTTTGATTCCGGTCAACCT | + |
Preference number: 3 (lower is better) Translates to: WTISLGLRELTW*FVPRGFDSGQP Trigger: AGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCCTCAACCCCAGGCTGATTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR GCA 72 bp | TTCTGCCTCAGACTATCACTGTCTCCCAACTCGGTTTaGAGCAGAGGCCCTTCCTACTGCCAAGTCTACATT | + |
Preference number: 3 (lower is better) Translates to: FCLRLSLSPNSV*SRGPSYCQVYI Trigger: AATGTAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTCTGAGGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | TGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCGGGTGGGCCAGCAGGTaGCGCTCGATCTCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: CGHRPRQSQALGGPAVRCGWASR*RSISRA Trigger: CGCCCTGGAGATCGAGCGGCACCTGCTGGCCCACCC...GCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGCAGCGTGTGGCCCGTaGCGCTCCTCCACTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGAACGP*RSSTSP Trigger: TGGAGAAGTGGAGGAGCGCCACGGGCCACACGCTGC...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | CTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGGCCACCTTCTGGGAATCAGCTaGCTGGAGGCCAAGGACCAG | + |
Preference number: 4 (lower is better) Translates to: LGPALRRGSSPGHWRAGHLLGIS*LEAKDQ Trigger: CTGGTCCTTGGCCTCCAGTCAGCTGATTCCCAGAAG...GTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTACGGTGGGTGCTCAGTaGACCCTTGGGCCTCCCTGT | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRATVGAQ*TLGPPC Trigger: ACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGT...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | CTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGGCCACTGCCGATCTCTGTCATaGCATAGCGCTCCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: LGPALRRGSSPGHWRAGHCRSLS*HSAPAA Trigger: CGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCA...GTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | ACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGATCCGTGTGGGCCTCTaGGGTGGTAGGCAGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: TLWDLPSGEAAAPGTGELIRVGL*GGRQEA Trigger: AGCCTCCTGCCTACCACCCCAGAGGCCCACACGGAT...CAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGACCACTTCTCCAGCAGTaGGACAGGCAGAGCGGCCGA | + |
Preference number: 4 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGPLLQQ*DRQSGR Trigger: TCGGCCGCTCTGCCTGTCCCACTGCTGGAGAAGTGG...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTCCACTTCTCCAGCAGTaGGACAGGCAGAGCGGCCGA | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRAPLLQQ*DRQSGR Trigger: TCGGCCGCTCTGCCTGTCCCACTGCTGGAGAAGTGG...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTAGGCCAGGGCACGGATaGATACCGGGACACTCCCAT | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRARPGHG*IPGHSH Trigger: ATGGGAGTGTCCCGGTATTCATCCGTGCCCTGGCCT...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | CAGCAGCCCCGGGCACTGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGGGACTCCCAGCCTCTaGGCCAGTGGACTTAGCCGC | + |
Preference number: 4 (lower is better) Translates to: QQPRALESWPQPCPYCACGTPSL*ASGLSR Trigger: GCGGCTAAGTCCACTGGCTCAGAGGCTGGGAGTCCC...ACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | CTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCGCGGGACGGTGGGTGCTCAGTaGACCCTTGGGCCTCCCTGT | + |
Preference number: 4 (lower is better) Translates to: LIAGGEGFHPRPIARDRGTVGAQ*TLGPPC Trigger: ACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGT...CCCGCGGTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCGAGATCCGTGTGGGCCTCTaGGGTGGTAGGCAGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: GHRPRQSQALGGPAVRCEIRVGL*GGRQEA Trigger: AGCCTCCTGCCTACCACCCCAGAGGCCCACACGGAT...CTCGCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | TCACGGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCACGCTCCAGCAGCGTGTaGCCCGTGGCGCTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: SRVPLLASRLHPPHVQNPRSSSV*PVALLH Trigger: GTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCG...TGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCCGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCGCTCCAGCAGCGTGTaGCCCGTGGCGCTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDRSSSV*PVALLH Trigger: GTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCG...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | ACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGTTTAGTCCACGCCCATaGGTGGACCAGCCCAGTCAC | + |
Preference number: 4 (lower is better) Translates to: TLWDLPSGEAAAPGTGELFSPRP*VDQPSH Trigger: GTGACTGGGCTGGTCCACTCATGGGCGTGGACTAAA...CAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | TCCCTGCCCTGGGTTAAGAAGGGAGCTGTGGGCACAGGCCCAGGCAATCCCAGGGAGCAACCACAGCTGTaGCCCGCTGGCCCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: SLPWVKKGAVGTGPGNPREQPQL*PAGPMS Trigger: TGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTC...CCTGGGATTGCCTGGGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTAGCTGGGCCTCAGGGTaGTTCCAGTACAGTGGGACA | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRASWASG*FQYSGT Trigger: TGTCCCACTGTACTGGAAGCACCCTGAGGCCCAGCT...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGGGGTGGGCCAGCAGGTaGCGCTCGATCTCCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQGWASR*RSISRA Trigger: CGCCCTGGAGATCGAGCGGCACCTGCTGGCCCACCC...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CAGCAGCCCCGGGCACTGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTATCCGTGTGGGCCTCTaGGGTGGTAGGCAGGAGGCT | + |
Preference number: 4 (lower is better) Translates to: QQPRALESWPQPCPYCACIRVGL*GGRQEA Trigger: AGCCTCCTGCCTACCACCCCAGAGGCCCACACGGAT...ACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCGCGGGTTGTTGACCACGCCGTaGACATGGTGCAGCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: LIAGGEGFHPRPIARDRGLLTTP*TWCSGR Trigger: CCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAA...CCCGCGGTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCCCACTTCTCCAGCAGTaGGACAGGCAGAGCGGCCGA | + |
Preference number: 4 (lower is better) Translates to: CGHRPRQSQALGGPAVRCPLLQQ*DRQSGR Trigger: TCGGCCGCTCTGCCTGTCCCACTGCTGGAGAAGTGG...GCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGATTCACCTTGCCCATCTaGTTCCGGGGGATCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGFTLPI*FRGISS Trigger: GGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAA...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | CTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCGCGGGCTTCTGGGAATCAGCTaGCTGGAGGCCAAGGACCAG | + |
Preference number: 4 (lower is better) Translates to: LIAGGEGFHPRPIARDRGLLGIS*LEAKDQ Trigger: CTGGTCCTTGGCCTCCAGTCAGCTGATTCCCAGAAG...CCCGCGGTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GTAAGGTGCGAGGCACTCAGGCAGTCCTCAGGGCTGCGAAGCCCAGGCCATCCTAGGCCAGGGCACGGATaGATACCGGGACACTCCCAT | + |
Preference number: 4 (lower is better) Translates to: VRCEALRQSSGLRSPGHPRPGHG*IPGHSH Trigger: ATGGGAGTGTCCCGGTATTCATCCGTGCCCTGGCCT...AGGATGGCCTGGGCTTCGCAGCCCTGAGGACTGCCTGAGTGCCTCGCACCTTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | ACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGTACAACCCTGAAGCCTaGAGATCTCCTGGGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: TLWDLPSGEAAAPGTGELYNPEA*RSPGPD Trigger: GTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTA...CAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCCCTTGGGCCTCCCTGTaGTCCCGCTGGTGTAGAAGA | + |
Preference number: 4 (lower is better) Translates to: CGHRPRQSQALGGPAVRCPWASL*SRWCRR Trigger: TCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGG...GCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | AGCTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTTGTTGACCACGCCGTaGACATGGTGCAGCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SCGHRPRQSQALGGPAVRLLTTP*TWCSGR Trigger: CCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAA...CCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCTTGTTGACCACGCCGTaGACATGGTGCAGCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: LTVTSDSLGPALRRGSSPLLTTP*TWCSGR Trigger: CCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAA...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCGCTCCAGCAGCGTGTaGCCCGTGGCGCTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: SRTTEDTASGQGHLGLDNRSSSV*PVALLH Trigger: GTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCG...ATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | AGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACTCGGTGATGCTGGGGTaGGCCAGCAGGTGCCGCTCG | + |
Preference number: 4 (lower is better) Translates to: SGQGHLGLDNQPGVEGTHSVMLG*ASRCRS Trigger: CGAGCGGCACCTGCTGGCCCACCCCAGCATCACCGA...GTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGAATTCGGTGATGCTGGGGTaGGCCAGCAGGTGCCGCTCG | + |
Preference number: 4 (lower is better) Translates to: GSHCWLLGFTLPTSRIQNSVMLG*ASRCRS Trigger: CGAGCGGCACCTGCTGGCCCACCCCAGCATCACCGA...ATTCTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACGAGCAACCACAGCTGTaGCCCGCTGGCCCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDEQPQL*PAGPMS Trigger: TGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTC...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | ACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGAGCAACCACAGCTGTaGCCCGCTGGCCCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: TEDTASGQGHLGLDNQPGEQPQL*PAGPMS Trigger: TGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTC...CCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GTAAGGTGCGAGGCACTCAGGCAGTCCTCAGGGCTGCGAAGCCCAGGCCATCCTTGCCGATCTCTGTCATaGCATAGCGCTCCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: VRCEALRQSSGLRSPGHPCRSLS*HSAPAA Trigger: CGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCA...AGGATGGCCTGGGCTTCGCAGCCCTGAGGACTGCCTGAGTGCCTCGCACCTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | CTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGAGCCTGCAGATCTCCTaGGCCAGACAAAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: LWAQAQAIPGFGRPCSKVSLQIS*ARQRLR Trigger: TCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCT...CACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGGCAGCGTGTGGCCCGTaGCGCTCCTCCACTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQAACGP*RSSTSP Trigger: TGGAGAAGTGGAGGAGCGCCACGGGCCACACGCTGC...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATTCGGTGATGCTGGGGTaGGCCAGCAGGTGCCGCTCG | + |
Preference number: 4 (lower is better) Translates to: SRTTEDTASGQGHLGLDNSVMLG*ASRCRS Trigger: CGAGCGGCACCTGCTGGCCCACCCCAGCATCACCGA...ATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCGCGGGACAGCTGTGACCCGCTaGCCCCATGTCATATCAGGA | + |
Preference number: 4 (lower is better) Translates to: LIAGGEGFHPRPIARDRGTAVTR*PHVISG Trigger: TCCTGATATGACATGGGGCCAGCGGGTCACAGCTGT...CCCGCGGTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CAGCAGCCCCGGGCACTGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTTTCACCTTGCCCATCTaGTTCCGGGGGATCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QQPRALESWPQPCPYCACFTLPI*FRGISS Trigger: GGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAA...ACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | AGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTGGGACTCCCAGCCTCTaGGCCAGTGGACTTAGCCGC | + |
Preference number: 4 (lower is better) Translates to: RAGHSRVLTVLVRLAHTSGTPSL*ASGLSR Trigger: GCGGCTAAGTCCACTGGCTCAGAGGCTGGGAGTCCC...ACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | CACGGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGTTTAGTCCACGCCCATaGGTGGACCAGCCCAGTCAC | + |
Preference number: 4 (lower is better) Translates to: HGSHCWLLGFTLPTSRIQFSPRP*VDQPSH Trigger: GTGACTGGGCTGGTCCACTCATGGGCGTGGACTAAA...CTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTTGCAGCGGGAGGACGTaGAGGATCACATCGTTTTTA | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRACSGRT*RITSFL Trigger: TAAAAACGATGTGATCCTTCACGTCCTCCCGCTGCA...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | AGCTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGCGATCTCCAGGGCGCTaGCTTTATAGCCTCCAGTCT | + |
Preference number: 4 (lower is better) Translates to: SCGHRPRQSQALGGPAVRRSPGR*LYSLQS Trigger: AGACTGGAGGCTATAAAGTCAGCGCCCTGGAGATCG...CCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | TCCCTGCCCTGGGTTAAGAAGGGAGCTGTGGGCACAGGCCCAGGCAATCCCAGGTACAACCCTGAAGCCTaGAGATCTCCTGGGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: SLPWVKKGAVGTGPGNPRYNPEA*RSPGPD Trigger: GTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTA...CCTGGGATTGCCTGGGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCCCTTGGGCCTCCCTGTaGTCCCGCTGGTGTAGAAGA | + |
Preference number: 4 (lower is better) Translates to: PLLTVTSDSLGPALRRGSPWASL*SRWCRR Trigger: TCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGG...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GCTTCACCCTCCCCACGTCCAGAATCCAGAATGGTTCACCCAGCCTCCCCGCTCGCGTACTTCCACTCCTaGCAATGGGGTCCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: ASPSPRPESRMVHPASPLAYFHS*QWGPHR Trigger: TCTGTGGGGACCCCATTGCCAGGAGTGGAAGTACGC...GAGCGGGGAGGCTGGGTGAACCATTCTGGATTCTGGACGTGGGGAGGGTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | AGCTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGACAGCTGTGACCCGCTaGCCCCATGTCATATCAGGA | + |
Preference number: 4 (lower is better) Translates to: SCGHRPRQSQALGGPAVRTAVTR*PHVISG Trigger: TCCTGATATGACATGGGGCCAGCGGGTCACAGCTGT...CCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCTTTAGTCCACGCCCATaGGTGGACCAGCCCAGTCAC | + |
Preference number: 4 (lower is better) Translates to: PLLTVTSDSLGPALRRGSFSPRP*VDQPSH Trigger: GTGACTGGGCTGGTCCACTCATGGGCGTGGACTAAA...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGTAGACAGTGGGCACTaGCATGAATACGGTAATCTG | + |
Preference number: 4 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGVDSGH*HEYGNL Trigger: CAGATTACCGTATTCATGGCAGTGCCCACTGTCTAC...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCATGAAATACTCCAGCTaGGCCTCAGGGTGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: LTVTSDSLGPALRRGSSPMKYSS*ASGCFQ Trigger: CTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCAT...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CACGGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGCGCTCCAAGTACTCCTaGCCAACCACCACCAAAGAG | + |
Preference number: 4 (lower is better) Translates to: HGSHCWLLGFTLPTSRIQRSKYS*PTTTKE Trigger: CTCTTTGGTGGTGGTTGGCCAGGAGTACTTGGAGCG...CTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GACTATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCTTCCTACTGCCAAGGCAGCGTGTGGCCCGTaGCGCTCCTCCACTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: DYHCLPTRFAAEALPTAKAACGP*RSSTSP Trigger: TGGAGAAGTGGAGGAGCGCCACGGGCCACACGCTGC...CTTGGCAGTAGGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | ACATTTCTGCCTCAGACTATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCGGGACTCCCAGCCTCTaGGCCAGTGGACTTAGCCGC | + |
Preference number: 4 (lower is better) Translates to: TFLPQTITVSQLGLQQRPGTPSL*ASGLSR Trigger: GCGGCTAAGTCCACTGGCTCAGAGGCTGGGAGTCCC...GGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTCTGAGGCAGAAATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | AGCTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCAGCGGGAGGACGTaGAGGATCACATCGTTTTTA | + |
Preference number: 4 (lower is better) Translates to: SCGHRPRQSQALGGPAVRCSGRT*RITSFL Trigger: TAAAAACGATGTGATCCTTCACGTCCTCCCGCTGCA...CCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTACCAGCCATCGGAAGTaGAAGCACTTTTCGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRATSHRK*KHFSFL Trigger: AAGAAACGAAAAGTGCTTTCACTTCCGATGGCTGGT...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTAGGGGTACAACTGTTTaGGCAGCTCCTTCTTATTCA | + |
Preference number: 4 (lower is better) Translates to: DSLGPALRRGSSPGHWRARGTTV*AAPSYS Trigger: TGAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCT...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACTACAACCCTGAAGCCTaGAGATCTCCTGGGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDYNPEA*RSPGPD Trigger: GTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTA...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTGCCGATCTCTGTCATaGCATAGCGCTCCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQCRSLS*HSAPAA Trigger: CGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCA...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCCGTAGGAGACGTCATTaGAGCACAGGAAGGAGACCC | + |
Preference number: 4 (lower is better) Translates to: PLLTVTSDSLGPALRRGSRRRRH*STGRRP Trigger: GGGTCTCCTTCCTGTGCTCCAATGACGTCTCCTACG...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCAGTGAATGTCCTTCTTaGAGAGCAACCACAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: LTVTSDSLGPALRRGSSPSECPS*RATTAV Trigger: CACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACT...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | TCCCTGCCCTGGGTTAAGAAGGGAGCTGTGGGCACAGGCCCAGGCAATCCCAGGAGTGAATGTCCTTCTTaGAGAGCAACCACAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: SLPWVKKGAVGTGPGNPRSECPS*RATTAV Trigger: CACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACT...CCTGGGATTGCCTGGGCCTGTGCCCACAGCTCCCTTCTTAACCCAGGGCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCCCCGGGCACTGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGTAGACAGTGGGCACTaGCATGAATACGGTAATCTG | + |
Preference number: 4 (lower is better) Translates to: QQPRALESWPQPCPYCACVDSGH*HEYGNL Trigger: CAGATTACCGTATTCATGGCAGTGCCCACTGTCTAC...ACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCAGTGCCCGGGGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | ACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGAGTAGTCCAGCAGCTTaGTGTAGACAGTGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: TEDTASGQGHLGLDNQPGSSPAA*CRQWAL Trigger: CAGTGCCCACTGTCTACAGCAAGCTGCTGGACTACT...CCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACAGTAGTCCAGCAGCTTaGTGTAGACAGTGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDSSPAA*CRQWAL Trigger: CAGTGCCCACTGTCTACAGCAAGCTGCTGGACTACT...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | AGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTAGCCTGCAGATCTCCTaGGCCAGACAAAGGCTGCGA | + |
Preference number: 4 (lower is better) Translates to: RAGHSRVLTVLVRLAHTSSLQIS*ARQRLR Trigger: TCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCT...ACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGAATCGTAGGAGACGTCATTaGAGCACAGGAAGGAGACCC | + |
Preference number: 4 (lower is better) Translates to: GSHCWLLGFTLPTSRIQNRRRRH*STGRRP Trigger: GGGTCTCCTTCCTGTGCTCCAATGACGTCTCCTACG...ATTCTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | ACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTGCTTCCAGTACAGTaGGACAGCAACACCACCACT | + |
Preference number: 4 (lower is better) Translates to: TEDTASGQGHLGLDNQPGVLPVQ*DSNTTT Trigger: AGTGGTGGTGTTGCTGTCCCACTGTACTGGAAGCAC...CCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGCGCTCCAAGTACTCCTaGCCAACCACCACCAAAGAG | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQRSKYS*PTTTKE Trigger: CTCTTTGGTGGTGGTTGGCCAGGAGTACTTGGAGCG...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GACTGGCACACACCAGTGATCTCAAGGACCACTGAGGACACAGCCAGTGGTCAGGCGTACTTCCACTCCTaGCAATGGGGTCCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: DWHTPVISRTTEDTASGQAYFHS*QWGPHR Trigger: TCTGTGGGGACCCCATTGCCAGGAGTGGAAGTACGC...CTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGACAGCTGTGACCCGCTaGCCCCATGTCATATCAGGA | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQTAVTR*PHVISG Trigger: TCCTGATATGACATGGGGCCAGCGGGTCACAGCTGT...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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3UTR CAA 72 bp | ACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTaGGACAATCAGCCTGGGGTTGAGGGAACTCACTTG | + |
Preference number: 4 (lower is better) Translates to: TEDTASGQGHLG*DNQPGVEGTHL Trigger: CAAGTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GACTGGCACACACCAGTGATCTCAAGGACCACTGAGGACACAGCCAGTGGTCAGCGATCTCCAGGGCGCTaGCTTTATAGCCTCCAGTCT | + |
Preference number: 4 (lower is better) Translates to: DWHTPVISRTTEDTASGQRSPGR*LYSLQS Trigger: AGACTGGAGGCTATAAAGTCAGCGCCCTGGAGATCG...CTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGAATAGTAGTCCAGCAGCTTaGTGTAGACAGTGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: GSHCWLLGFTLPTSRIQNSSPAA*CRQWAL Trigger: CAGTGCCCACTGTCTACAGCAAGCTGCTGGACTACT...ATTCTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGGTGCTTCCAGTACAGTaGGACAGCAACACCACCACT | + |
Preference number: 4 (lower is better) Translates to: ESWPQPCPYCACETGTHQVLPVQ*DSNTTT Trigger: AGTGGTGGTGTTGCTGTCCCACTGTACTGGAAGCAC...CTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATGGCTCCTACCCAGAGTaGACAGAGCAGCTTGTTGAC | + |
Preference number: 4 (lower is better) Translates to: SRTTEDTASGQGHLGLDNGSYPE*TEQLVD Trigger: GTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCC...ATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | AGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTCCAACTTTACAACCCTaGAGCCTGCAGATCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: RAGHSRVLTVLVRLAHTSPTLQP*SLQISW Trigger: CCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGG...ACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCCAACTTTACAACCCTaGAGCCTGCAGATCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: SRTTEDTASGQGHLGLDNPTLQP*SLQISW Trigger: CCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGG...ATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | TGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCTGCAGCGGGAGGACGTaGAGGATCACATCGTTTTTA | + |
Preference number: 4 (lower is better) Translates to: WRAGHSRVLTVLVRLAHTCSGRT*RITSFL Trigger: TAAAAACGATGTGATCCTTCACGTCCTCCCGCTGCA...GGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACAGTGAATGTCCTTCTTaGAGAGCAACCACAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDSECPS*RATTAV Trigger: CACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACT...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCGAGACCCTTTCTTCCTaGAGGTCCCCAACTTTACAA | + |
Preference number: 4 (lower is better) Translates to: PLLTVTSDSLGPALRRGSETLSS*RSPTLQ Trigger: TTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGTCTC...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACGAGACCCTTTCTTCCTaGAGGTCCCCAACTTTACAA | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDETLSS*RSPTLQ Trigger: TTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGTCTC...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TCAAGGACCACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATATGAAATACTCCAGCTaGGCCTCAGGGTGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: SRTTEDTASGQGHLGLDNMKYSS*ASGCFQ Trigger: CTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCAT...ATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGTGGTCCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | TTCTGCCTCAGACTATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCTTCCGGCTCCTACCCAGAGTaGACAGAGCAGCTTGTTGAC | + |
Preference number: 4 (lower is better) Translates to: FCLRLSLSPNSVCSRGPSGSYPE*TEQLVD Trigger: GTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCC...GGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTCTGAGGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | CCTCTTCTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCACCAGCCATCGGAAGTaGAAGCACTTTTCGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: PLLTVTSDSLGPALRRGSTSHRK*KHFSFL Trigger: AAGAAACGAAAAGTGCTTTCACTTCCGATGGCTGGT...GCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGAATGTAGACAGTGGGCACTaGCATGAATACGGTAATCTG | + |
Preference number: 4 (lower is better) Translates to: GSHCWLLGFTLPTSRIQNVDSGH*HEYGNL Trigger: CAGATTACCGTATTCATGGCAGTGCCCACTGTCTAC...ATTCTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | TGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGTGCTCTTTCTTTACAAACTaGACGCACAAAATCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: CGHRPRQSQALGGPAVRCSFFTN*THKILD Trigger: GTCCAGGATTTTGTGCGTGCAGTTTGTAAAGAAAGA...GCACCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCTCTTTCTTTACAAACTaGACGCACAAAATCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: LTVTSDSLGPALRRGSSPSFFTN*THKILD Trigger: GTCCAGGATTTTGTGCGTGCAGTTTGTAAAGAAAGA...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCACTTTTCGTTTCTTCTaGCTTATCCCAGTATTCTCG | + |
Preference number: 4 (lower is better) Translates to: LTVTSDSLGPALRRGSSPTFRFF*LIPVFS Trigger: CGAGAATACTGGGATAAGCCAGAAGAAACGAAAAGT...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACCTGAGACCATCAGCCTaGTTCTTTCTTTACAAACTG | + |
Preference number: 4 (lower is better) Translates to: VNLIAGGEGFHPRPIARDLRPSA*FFLYKL Trigger: CAGTTTGTAAAGAAAGAATCAGGCTGATGGTCTCAG...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR GCA 90 bp | GCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAAACTAACGGTGGGTGCTCAGTaGACCCTTGGGCCTCCCTGT | + |
Preference number: 4 (lower is better) Translates to: AEALPTAKSTFNEGRDKLTVGAQ*TLGPPC Trigger: ACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGT...TAGTTTGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | ACATTTCTGCCTCAGACTATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCGTGCTTCCAGTACAGTaGGACAGCAACACCACCACT | + |
Preference number: 4 (lower is better) Translates to: TFLPQTITVSQLGLQQRPVLPVQ*DSNTTT Trigger: AGTGGTGGTGTTGCTGTCCCACTGTACTGGAAGCAC...GGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTCTGAGGCAGAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | ATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCTTCCTACTGCCAAGTCTAATGAAATACTCCAGCTaGGCCTCAGGGTGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: ITVSQLGLQQRPFLLPSLMKYSS*ASGCFQ Trigger: CTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCAT...TAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTCCTTGGGCCTCCCTGTaGTCCCGCTGGTGTAGAAGA | + |
Preference number: 4 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIPWASL*SRWCRR Trigger: TCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGG...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | AGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACCTGAGACCATCAGCCTaGTTCTTTCTTTACAAACTG | + |
Preference number: 4 (lower is better) Translates to: SGQGHLGLDNQPGVEGTHLRPSA*FFLYKL Trigger: CAGTTTGTAAAGAAAGAATCAGGCTGATGGTCTCAG...GTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GACTGGCACACACCAGTGATCTCAAGGACCACTGAGGACACAGCCAGTGGTCAGAGGGGTACAACTGTTTaGGCAGCTCCTTCTTATTCA | + |
Preference number: 4 (lower is better) Translates to: DWHTPVISRTTEDTASGQRGTTV*AAPSYS Trigger: TGAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCT...CTGACCACTGGCTGTGTCCTCAGTGGTCCTTGAGATCACTGGTGTGTGCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTGCGTACTTCCACTCCTaGCAATGGGGTCCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIAYFHS*QWGPHR Trigger: TCTGTGGGGACCCCATTGCCAGGAGTGGAAGTACGC...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAAACTACTTCTGGGAATCAGCTaGCTGGAGGCCAAGGACCAG | + |
Preference number: 4 (lower is better) Translates to: AEALPTAKSTFNEGRDKLLLGIS*LEAKDQ Trigger: CTGGTCCTTGGCCTCCAGTCAGCTGATTCCCAGAAG...TAGTTTGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | GCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAAACTAAGCTGGGCCTCAGGGTaGTTCCAGTACAGTGGGACA | + |
Preference number: 4 (lower is better) Translates to: AEALPTAKSTFNEGRDKLSWASG*FQYSGT Trigger: TGTCCCACTGTACTGGAAGCACCCTGAGGCCCAGCT...TAGTTTGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | ATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCTTCCTACTGCCAAGTCTAGAGACCCTTTCTTCCTaGAGGTCCCCAACTTTACAA | + |
Preference number: 4 (lower is better) Translates to: ITVSQLGLQQRPFLLPSLETLSS*RSPTLQ Trigger: TTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGTCTC...TAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTCGTAGGAGACGTCATTaGAGCACAGGAAGGAGACCC | + |
Preference number: 4 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIRRRRH*STGRRP Trigger: GGGTCTCCTTCCTGTGCTCCAATGACGTCTCCTACG...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTCGCTCCAAGTACTCCTaGCCAACCACCACCAAAGAG | + |
Preference number: 4 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIRSKYS*PTTTKE Trigger: CTCTTTGGTGGTGGTTGGCCAGGAGTACTTGGAGCG...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTGGCTCCTACCCAGAGTaGACAGAGCAGCTTGTTGAC | + |
Preference number: 4 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIGSYPE*TEQLVD Trigger: GTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCC...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CCA 90 bp | AGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACACTTTTCGTTTCTTCTaGCTTATCCCAGTATTCTCG | + |
Preference number: 4 (lower is better) Translates to: SGQGHLGLDNQPGVEGTHTFRFF*LIPVFS Trigger: CGAGAATACTGGGATAAGCCAGAAGAAACGAAAAGT...GTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | TTGCAGCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACACCAACTTTACAACCCTaGAGCCTGCAGATCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: LQQRPFLLPSLHLMREETPTLQP*SLQISW Trigger: CCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGG...TGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR GCA 90 bp | AGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTTCTTTCTTTACAAACTaGACGCACAAAATCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: RAGHSRVLTVLVRLAHTSSFFTN*THKILD Trigger: GTCCAGGATTTTGTGCGTGCAGTTTGTAAAGAAAGA...ACTGGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR TCA 90 bp | GCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAAACTAACCAGCCATCGGAAGTaGAAGCACTTTTCGTTTCTT | + |
Preference number: 4 (lower is better) Translates to: AEALPTAKSTFNEGRDKLTSHRK*KHFSFL Trigger: AAGAAACGAAAAGTGCTTTCACTTCCGATGGCTGGT...TAGTTTGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR TCA 90 bp | GCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAAACTACTGAGACCATCAGCCTaGTTCTTTCTTTACAAACTG | + |
Preference number: 4 (lower is better) Translates to: AEALPTAKSTFNEGRDKLLRPSA*FFLYKL Trigger: CAGTTTGTAAAGAAAGAATCAGGCTGATGGTCTCAG...TAGTTTGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CCA 90 bp | TTGCAGCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAACTTTTCGTTTCTTCTaGCTTATCCCAGTATTCTCG | + |
Preference number: 4 (lower is better) Translates to: LQQRPFLLPSLHLMREETTFRFF*LIPVFS Trigger: CGAGAATACTGGGATAAGCCAGAAGAAACGAAAAGT...TGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CAA 90 bp | CTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGGCCACCCTCTGGCCCACTCCTaGAGATCCCCGTGGGACAGT | + |
Preference number: 5 (lower is better) Translates to: LGPALRRGSSPGHWRAGHPLAHS*RSPWDS Trigger: ACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGAGG...GTGGCCAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS CCA 90 bp | TGCCGATCTCTGTCATGCCATAGCGCTCCAGCAGCGTGTGGCCCGTaGCGCTCCTCCACTTCTCCAGCAGTGGGACAGGCAGAGCGGCCG | + |
Preference number: 5 (lower is better) Translates to: CRSLSCHSAPAACGP*RSSTSPAVGQAERP Trigger: CGGCCGCTCTGCCTGTCCCACTGCTGGAGAAGTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS GCA 90 bp | GAGCCTCCGTCAGGGGGTTGGACAGAGCCATGCCGATCTCTGTCATaGCATAGCGCTCCAGCAGCGTGTGGCCCGTGGCGCTCCTCCACT | + |
Preference number: 5 (lower is better) Translates to: EPPSGGWTEPCRSLS*HSAPAACGPWRSST Trigger: AGTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCATGGCTCTGTCCAACCCCCTGACGGAGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | CGGCTAGGTTACGGTGGGTGCTCAGTGCACCCTTGGGCCTCCCTGTaGTCCCGCTGGTGTAGAAGATCATGGCACCCCGGTCACGCCACC | + |
Preference number: 5 (lower is better) Translates to: RLGYGGCSVHPWASL*SRWCRRSWHPGHAT Trigger: GGTGGCGTGACCGGGGTGCCATGATCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGTAACCTAGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | GACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTCTGTGGGCTTCTCTGTaGCTCCATGGTAGACGGCAG | + |
Preference number: 5 (lower is better) Translates to: DSLGPALRRGSSPGHWRALWASL*LHGRRQ Trigger: CTGCCGTCTACCATGGAGCAACAGAGAAGCCCACAG...AGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS GCA 90 bp | ATGAGTGGACCAGCCCAGTCACCACAGCGGCTAGGTTACGGTGGGTaGTCAGTGCACCCTTGGGCCTCCCTGTGGTCCCGCTGGTGTAGA | + |
Preference number: 5 (lower is better) Translates to: MSGPAQSPQRLGYGG*SVHPWASLWSRWCR Trigger: TCTACACCAGCGGGACCACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGTAACCTAGCCGCTGTGGTGACTGGGCTGGTCCACTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | GTGCACCCTTGGGCCTCCCTGTGGTCCCGCTGGTGTAGAAGATCATaGCACCCCGGTCACGCCACCCACTCTCTTCAACTGGCTGCTCTG | + |
Preference number: 5 (lower is better) Translates to: VHPWASLWSRWCRRS*HPGHATHSLQLAAL Trigger: CAGAGCAGCCAGTTGAAGAGAGTGGGTGGCGTGACCGGGGTGCCATGATCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGGGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | TACGGTGGGTGCTCAGTGCACCCTTGGGCCTCCCTGTGGTCCCGCTaGTGTAGAAGATCATGGCACCCCGGTCACGCCACCCACTCTCTT | + |
Preference number: 5 (lower is better) Translates to: YGGCSVHPWASLWSR*CRRSWHPGHATHSL Trigger: AAGAGAGTGGGTGGCGTGACCGGGGTGCCATGATCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGATCCTTCTTATTCACCTaGCCCATCTGGTTCCGGGGG | + |
Preference number: 5 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGSFLFT*PIWFRG Trigger: CCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGA...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS CCA 90 bp | CCAAAGGCCAGGGCACGGATGAATACCGGGACACTCCCATCCGTGTaGGCCTCTGGGGTGGTAGGCAGGAGGCTATGTCCTCGGTGTCTT | + |
Preference number: 5 (lower is better) Translates to: PKARARMNTGTLPSV*ASGVVGRRLCPRCL Trigger: AAGACACCGAGGACATAGCCTCCTGCCTACCACCCCAGAGGCCCACACGGATGGGAGTGTCCCGGTATTCATCCGTGCCCTGGCCTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | GTAAGGTGCGAGGCACTCAGGCAGTCCTCAGGGCTGCGAAGCCCAGGCCATCCTCTGTGGGCTTCTCTGTaGCTCCATGGTAGACGGCAG | + |
Preference number: 5 (lower is better) Translates to: VRCEALRQSSGLRSPGHPLWASL*LHGRRQ Trigger: CTGCCGTCTACCATGGAGCAACAGAGAAGCCCACAG...AGGATGGCCTGGGCTTCGCAGCCCTGAGGACTGCCTGAGTGCCTCGCACCTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CAA 90 bp | AGCTGTGGGCACAGGCCCAGGCAATCCCAGGCTTTGGGAGGCCCTGCAGTAAGGAGTGGACAGAGCAGCTaGTTGACCACGCCGTGGACA | + |
Preference number: 5 (lower is better) Translates to: SCGHRPRQSQALGGPAVRSGQSS*LTTPWT Trigger: TGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACT...CCTTACTGCAGGGCCTCCCAAAGCCTGGGATTGCCTGGGCCTGTGCCCACAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CAA 90 bp | ACTGAGGACACAGCCAGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGCCTCTGGCCCACTCCTaGAGATCCCCGTGGGACAGT | + |
Preference number: 5 (lower is better) Translates to: TEDTASGQGHLGLDNQPGPLAHS*RSPWDS Trigger: ACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGAGG...CCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACTGGCTGTGTCCTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 90 bp | GGCCAGGACACCTCTGGCCCACTCCTTGAGATCCCCGTGGGACAGTaGATGTCCTTCTTGAAGAGCAACCACAGCTGTGACCCGCTGGCC | + |
Preference number: 5 (lower is better) Translates to: GQDTSGPLLEIPVGQ*MSFLKSNHSCDPLA Trigger: GGCCAGCGGGTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGAGGTGTCCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS CCA 90 bp | AGCACTGAACTCCGGCAGCATGACACAGGTGGCTCCTACCCAGAGTaGACAGAGCAGCTTGTTGACCACGCCGTGGACATGGTGCAGCGG | + |
Preference number: 5 (lower is better) Translates to: STELRQHDTGGSYPE*TEQLVDHAVDMVQR Trigger: CCGCTGCACCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCCACCTGTGTCATGCTGCCGGAGTTCAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | CTCACTGTCACCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCTCCTTCTTATTCACCTaGCCCATCTGGTTCCGGGGG | + |
Preference number: 5 (lower is better) Translates to: LTVTSDSLGPALRRGSSPSFLFT*PIWFRG Trigger: CCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGA...GGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGGTGACAGTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 90 bp | GTGGTAGGCAGGAGGCTATGTCCTCGGTGTCTTCTGGGAATCAGCTaGCTGGAGGCCAAGGACCAGAAGAGACGCCTGAAGGGCAGTGCC | + |
Preference number: 5 (lower is better) Translates to: VVGRRLCPRCLLGIS*LEAKDQKRRLKGSA Trigger: GGCACTGCCCTTCAGGCGTCTCTTCTGGTCCTTGGCCTCCAGTCAGCTGATTCCCAGAAGACACCGAGGACATAGCCTCCTGCCTACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | GGGTCCCACTGTTGGCTTCTCGGCTTCACCCTCCCCACGTCCAGAATCCAGAATGGACAGAGCAGCTTGTaGACCACGCCGTGGACATGG | + |
Preference number: 5 (lower is better) Translates to: GSHCWLLGFTLPTSRIQNGQSSL*TTPWTW Trigger: CCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCC...ATTCTGGATTCTGGACGTGGGGAGGGTGAAGCCGAGAAGCCAACAGTGGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CAA 90 bp | GTCAACCTGATTGCAGGAGGGGAGGGGTTCCATCCGAGGCCCATAGCACGTGACAGTGGACAGAGCAGCTaGTTGACCACGCCGTGGACA | + |
Preference number: 5 (lower is better) Translates to: VNLIAGGEGFHPRPIARDSGQSS*LTTPWT Trigger: TGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACT...GTCACGTGCTATGGGCCTCGGATGGAACCCCTCCCCTCCTGCAATCAGGTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | ACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGCTGGAGGGGTACAACTGTTaGAGCAGCTCCTTCTTATTC | + |
Preference number: 5 (lower is better) Translates to: TLWDLPSGEAAAPGTGELEGYNC*SSSFLF Trigger: GAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCTC...CAGCTCTCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | CCTCTGACTCTCTGGGACCTGCCCTCAGGAGAGGCAGCAGCCCCGGGCACTGGAGAGGGGTACAACTGTTaGAGCAGCTCCTTCTTATTC | + |
Preference number: 5 (lower is better) Translates to: PLTLWDLPSGEAAAPGTGEGYNC*SSSFLF Trigger: GAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCTC...TCCAGTGCCCGGGGCTGCTGCCTCTCCTGAGGGCAGGTCCCAGAGAGTCAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS GCA 90 bp | GAGCTCCGGGAGTCCTGGATGAAATACTCCAGCTGGGCCTCAGGGTaGTTCCAGTACAGTGGGACAGCAACACCACCACTCATCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: ELRESWMKYSSWASG*FQYSGTATPPLIQE Trigger: CTCCTGGATGAGTGGTGGTGTTGCTGTCCCACTGTACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | GTAGAAGATCATGGCACCCCGGTCACGCCACCCACTCTCTTCAACTaGCTGCTCTGTGGGCTTCTCTGTTGCTCCATGGTAGACGGCAGG | + |
Preference number: 5 (lower is better) Translates to: VEDHGTPVTPPTLFN*LLCGLLCCSMVDGR Trigger: CCTGCCGTCTACCATGGAGCAACAGAGAAGCCCACAGAGCAGCCAGTTGAAGAGAGTGGGTGGCGTGACCGGGGTGCCATGATCTTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | AGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACCTGTGGGCTTCTCTGTaGCTCCATGGTAGACGGCAG | + |
Preference number: 5 (lower is better) Translates to: SGQGHLGLDNQPGVEGTHLWASL*LHGRRQ Trigger: CTGCCGTCTACCATGGAGCAACAGAGAAGCCCACAG...GTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | TGGAGAGCTGGCCACAGCCGTGTCCTTACTGTGCTTGTGAGACTGGCACACACCAGTGGACAGAGCAGCTaGTTGACCACGCCGTGGACA | + |
Preference number: 5 (lower is better) Translates to: WRAGHSRVLTVLVRLAHTSGQSS*LTTPWT Trigger: TGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACT...GGTGTGTGCCAGTCTCACAAGCACAGTAAGGACACGGCTGTGGCCAGCTCTCCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | AGTGGTCAGGGTCACCTGGGCTTGGACAATCAGCCTGGGGTTGAGGGAACTCACACCCTGGAGTCACCTTaGTCCCCCTCTCGTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: SGQGHLGLDNQPGVEGTHTLESP*SPSRFP Trigger: AGGGAAACGAGAGGGGGACAAAGGTGACTCCAGGGT...GTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGACCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 90 bp | AGTACTCCTGGCCAACCACCACCAAAGAGCTCCGGGAGTCCTGGATaGAATACTCCAGCTGGGCCTCAGGGTGCTTCCAGTACAGTGGGA | + |
Preference number: 5 (lower is better) Translates to: STPGQPPPKSSGSPG*NTPAGPQGASSTVG Trigger: TCCCACTGTACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTTGGTGGTGGTTGGCCAGGAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 90 bp | AGCAGCTTGTTGACCACGCCGTGGACATGGTGCAGCGGGAGGACGTaGAGGATCACATCGTTTTTAGTCCACGCCCATGAGTGGACCAGC | + |
Preference number: 5 (lower is better) Translates to: SSLLTTPWTWCSGRT*RITSFLVHAHEWTS Trigger: GCTGGTCCACTCATGGGCGTGGACTAAAAACGATGTGATCCTTCACGTCCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAAGCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | ACCACCACCAAAGAGCTCCGGGAGTCCTGGATGAAATACTCCAGCTaGGCCTCAGGGTGCTTCCAGTACAGTGGGACAGCAACACCACCA | + |
Preference number: 5 (lower is better) Translates to: TTTKELRESWMKYSS*ASGCFQYSGTATPP Trigger: TGGTGGTGTTGCTGTCCCACTGTACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTTGGTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | GGGTACAACTGTTTGAGCAGCTCCTTCTTATTCACCTTGCCCATCTaGTTCCGGGGGATCTCCTCCACCAGCAGGAGCTCCGAGGGCACA | + |
Preference number: 5 (lower is better) Translates to: GYNCLSSSFLFTLPI*FRGISSTSRSSEGT Trigger: TGTGCCCTCGGAGCTCCTGCTGGTGGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGAGCTGCTCAAACAGTTGTACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | GACTATCACTGTCTCCCAACTCGGTTTGCAGCAGAGGCCCTTCCTACTGCCAAGTACCTGGCCCACTCCTaGAGATCCCCGTGGGACAGT | + |
Preference number: 5 (lower is better) Translates to: DYHCLPTRFAAEALPTAKYLAHS*RSPWDS Trigger: ACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGGTA...CTTGGCAGTAGGAAGGGCCTCTGCTGCAAACCGAGTTGGGAGACAGTGATAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS TCA 90 bp | CTGGCCCACTCCTTGAGATCCCCGTGGGACAGTGAATGTCCTTCTTaGAGAGCAACCACAGCTGTGACCCGCTGGCCCCATGTCATATCA | + |
Preference number: 5 (lower is better) Translates to: LAHSLRSPWDSECPS*RATTAVTRWPHVIS Trigger: TGATATGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGGATCTCAAGGAGTGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS GCA 90 bp | GTACAGTGGGACAGCAACACCACCACTCATCCAGGAGGCCCACTGTaGTACAACGTAGGAGACGTCATTGGAGCACAGGAAGGAGACCCT | + |
Preference number: 5 (lower is better) Translates to: VQWDSNTTTHPGGPL*YNVGDVIGAQEGDP Trigger: AGGGTCTCCTTCCTGTGCTCCAATGACGTCTCCTACGTTGTAGCACAGTGGGCCTCCTGGATGAGTGGTGGTGTTGCTGTCCCACTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | TCCAAGTACTCCTGGCCAACCACCACCAAAGAGCTCCGGGAGTCCTaGATGAAATACTCCAGCTGGGCCTCAGGGTGCTTCCAGTACAGT | + |
Preference number: 5 (lower is better) Translates to: SKYSWPTTTKELRES*MKYSSWASGCFQYS Trigger: ACTGTACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTTGGTGGTGGTTGGCCAGGAGTACTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | CACTCATCCAGGAGGCCCACTGTGCTACAACGTAGGAGACGTCATTaGAGCACAGGAAGGAGACCCTTTCTTCCTGGAGGTCCCCAACTT | + |
Preference number: 5 (lower is better) Translates to: HSSRRPTVLQRRRRH*STGRRPFLPGGPQL Trigger: AAGTTGGGGACCTCCAGGAAGAAAGGGTCTCCTTCCTGTGCTCCAATGACGTCTCCTACGTTGTAGCACAGTGGGCCTCCTGGATGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 90 bp | AGGAAGGAGACCCTTTCTTCCTGGAGGTCCCCAACTTTACAACCCTaGAGCCTGCAGATCTCCTGGGCCAGACAAAGGCTGCGATCATAC | + |
Preference number: 5 (lower is better) Translates to: RKETLSSWRSPTLQP*SLQISWARQRLRSY Trigger: GTATGATCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGTCTCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 90 bp | CCCCGTGGGACAGTGAATGTCCTTCTTGAAGAGCAACCACAGCTGTaGCCCGCTGGCCCCATGTCATATCAGGAACTCCAATTACAGCGA | + |
Preference number: 5 (lower is better) Translates to: PRGTVNVLLEEQPQL*PAGPMSYQELQLQR Trigger: TCGCTGTAATTGGAGTTCCTGATATGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS GCA 90 bp | AGACCCTTTCTTCCTGGAGGTCCCCAACTTTACAACCCTGAAGCCTaGAGATCTCCTGGGCCAGACAAAGGCTGCGATCATACAGTTCCC | + |
Preference number: 5 (lower is better) Translates to: RPFLPGGPQLYNPEA*RSPGPDKGCDHTVP Trigger: GGGAACTGTATGATCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTGGACAGAGCAGCTTGTaGACCACGCCGTGGACATGG | + |
Preference number: 5 (lower is better) Translates to: GNSLGDSSLEVLIPVNLIGQSSL*TTPWTW Trigger: CCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCC...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS-3UTR CAA 90 bp | TTGCAGCAGAGGCCCTTCCTACTGCCAAGTCTACATTTAATGAGGGAAGAGACAACCCTGGAGTCACCTTaGTCCCCCTCTCGTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: LQQRPFLLPSLHLMREETTLESP*SPSRFP Trigger: AGGGAAACGAGAGGGGGACAAAGGTGACTCCAGGGT...TGTCTCTTCCCTCATTAAATGTAGACTTGGCAGTAGGAAGGGCCTCTGCTGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS-3UTR CAA 90 bp | GGGAACTCACTTGGTGATTCGTCCCTAGAGGTTTTGATTCCGGTCAACCTGATTACCCTGGAGTCACCTTaGTCCCCCTCTCGTTTCCCT | + |
Preference number: 5 (lower is better) Translates to: GNSLGDSSLEVLIPVNLITLESP*SPSRFP Trigger: AGGGAAACGAGAGGGGGACAAAGGTGACTCCAGGGT...AATCAGGTTGACCGGAATCAAAACCTCTAGGGACGAATCACCAAGTGAGTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS GCA 90 bp | CTTTACAACCCTGAAGCCTGCAGATCTCCTGGGCCAGACAAAGGCTaGGATCATACAGTTCCCTGTAGGTGTGATGGCCATATTTGTCAA | + |
Preference number: 5 (lower is better) Translates to: LYNPEACRSPGPDKG*DHTVPCRCDGHICQ Trigger: TTGACAAATATGGCCATCACACCTACAGGGAACTGTATGATCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | TGTTCTGAACCAGCCATCGGAAGTGAAAGCACTTTTCGTTTCTTCTaGCTTATCCCAGTATTCTCGGAACACCGAGGGTCCCCTAACCAG | + |
Preference number: 5 (lower is better) Translates to: CSEPAIGSESTFRFF*LIPVFSEHRGSPNQ Trigger: CTGGTTAGGGGACCCTCGGTGTTCCGAGAATACTGGGATAAGCCAGAAGAAACGAAAAGTGCTTTCACTTCCGATGGCTGGTTCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 90 bp | CAGCTTGCTGTAGACAGTGGGCACTGCCATGAATACGGTAATCTGTaGGGCTTCAGAACTCAAGAATTTTTCCCAAACCTGCTGAGCACT | + |
Preference number: 5 (lower is better) Translates to: QLAVDSGHCHEYGNL*GFRTQEFFPNLLST Trigger: AGTGCTCAGCAGGTTTGGGAAAAATTCTTGAGTTCTGAAGCCCCACAGATTACCGTATTCATGGCAGTGCCCACTGTCTACAGCAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 90 bp | TTTCTTTACAAACTGCACGCACAAAATCCTGGACATGGGGCTGCGTaGAATGCTTGTCATAGTAGTCCAGCAGCTTGCTGTAGACAGTGG | + |
Preference number: 5 (lower is better) Translates to: FLYKLHAQNPGHGAA*NACHSSPAACCRQW Trigger: CCACTGTCTACAGCAAGCTGCTGGACTACTATGACAAGCATTTCACGCAGCCCCATGTCCAGGATTTTGTGCGTGCAGTTTGTAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS GCA 72 bp | TCAGGGGGTTGGACAGAGCCATGCCGATCTCTGTCATaGCATAGCGCTCCAGCAGCGTGTGGCCCGTGGCGC | + |
Preference number: 6 (lower is better) Translates to: SGGWTEPCRSLS*HSAPAACGPWR Trigger: GCGCCACGGGCCACACGCTGCTGGAGCGCTATGGCATGACAGAGATCGGCATGGCTCTGTCCAACCCCCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | CTGTCATGCCATAGCGCTCCAGCAGCGTGTGGCCCGTaGCGCTCCTCCACTTCTCCAGCAGTGGGACAGGCA | + |
Preference number: 6 (lower is better) Translates to: LSCHSAPAACGP*RSSTSPAVGQA Trigger: TGCCTGTCCCACTGCTGGAGAAGTGGAGGAGCGCCACGGGCCACACGCTGCTGGAGCGCTATGGCATGACAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | TACGGTGGGTGCTCAGTGCACCCTTGGGCCTCCCTGTaGTCCCGCTGGTGTAGAAGATCATGGCACCCCGGT | + |
Preference number: 6 (lower is better) Translates to: YGGCSVHPWASL*SRWCRRSWHPG Trigger: ACCGGGGTGCCATGATCTTCTACACCAGCGGGACCACAGGGAGGCCCAAGGGTGCACTGAGCACCCACCGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | GGAACTCCAATTACAGCGACATCGGTGATGCTGGGGTaGGCCAGCAGGTGCCGCTCGATCTCCAGGGCGCTG | + |
Preference number: 6 (lower is better) Translates to: GTPITATSVMLG*ASRCRSISRAL Trigger: CAGCGCCCTGGAGATCGAGCGGCACCTGCTGGCCCACCCCAGCATCACCGATGTCGCTGTAATTGGAGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 72 bp | CAGGTGGCTCCTACCCAGAGTGGACAGAGCAGCTTGTaGACCACGCCGTGGACATGGTGCAGCGGGAGGACG | + |
Preference number: 6 (lower is better) Translates to: QVAPTQSGQSSL*TTPWTWCSGRT Trigger: CGTCCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCCACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 72 bp | AGGTGGCTCCTACCCAGAGTGGACAGAGCAGCTTGTTaGCCACGCCGTGGACATGGTGCAGCGGGAGGACGT | + |
Preference number: 6 (lower is better) Translates to: RWLLPRVDRAAC*PRRGHGAAGGR Trigger: ACGTCCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | AGGGCACGGATGAATACCGGGACACTCCCATCCGTGTaGGCCTCTGGGGTGGTAGGCAGGAGGCTATGTCCT | + |
Preference number: 6 (lower is better) Translates to: RARMNTGTLPSV*ASGVVGRRLCP Trigger: AGGACATAGCCTCCTGCCTACCACCCCAGAGGCCCACACGGATGGGAGTGTCCCGGTATTCATCCGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | TGGGCCTCCCTGTGGTCCCGCTGGTGTAGAAGATCATaGCACCCCGGTCACGCCACCCACTCTCTTCAACTG | + |
Preference number: 6 (lower is better) Translates to: WASLWSRWCRRS*HPGHATHSLQL Trigger: CAGTTGAAGAGAGTGGGTGGCGTGACCGGGGTGCCATGATCTTCTACACCAGCGGGACCACAGGGAGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 72 bp | ACACAGGTGGCTCCTACCCAGAGTGGACAGAGCAGCTaGTTGACCACGCCGTGGACATGGTGCAGCGGGAGG | + |
Preference number: 6 (lower is better) Translates to: TQVAPTQSGQSS*LTTPWTWCSGR Trigger: CCTCCCGCTGCACCATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCCACCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | CTCCGGCAGCATGACACAGGTGGCTCCTACCCAGAGTaGACAGAGCAGCTTGTTGACCACGCCGTGGACATG | + |
Preference number: 6 (lower is better) Translates to: LRQHDTGGSYPE*TEQLVDHAVDM Trigger: CATGTCCACGGCGTGGTCAACAAGCTGCTCTGTCCACTCTGGGTAGGAGCCACCTGTGTCATGCTGCCGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 72 bp | GGCCAACCACCACCAAAGAGCTCCGGGAGTCCTGGATaGAATACTCCAGCTGGGCCTCAGGGTGCTTCCAGT | + |
Preference number: 6 (lower is better) Translates to: GQPPPKSSGSPG*NTPAGPQGASS Trigger: ACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTTGGTGGTGGTTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | TCCTGGCCAACCACCACCAAAGAGCTCCGGGAGTCCTaGATGAAATACTCCAGCTGGGCCTCAGGGTGCTTC | + |
Preference number: 6 (lower is better) Translates to: SWPTTTKELRES*MKYSSWASGCF Trigger: GAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTTGGTGGTGGTTGGCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS GCA 72 bp | ACTCTCTTCAACTGGCTGCTCTGTGGGCTTCTCTGTTaGTCCATGGTAGACGGCAGGCGTGAGCGGCAGAAG | + |
Preference number: 6 (lower is better) Translates to: TLFNWLLCGLLC*SMVDGRRERQK Trigger: CTTCTGCCGCTCACGCCTGCCGTCTACCATGGAGCAACAGAGAAGCCCACAGAGCAGCCAGTTGAAGAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 72 bp | ACAGACGTGCGCCCTCGGATCCAGTACCTAGCATCCTaGAACACGGCGGTGTCTCCTGTTCTGAACCAGCCA | + |
Preference number: 6 (lower is better) Translates to: TDVRPRIQYLAS*NTAVSPVLNQP Trigger: TGGCTGGTTCAGAACAGGAGACACCGCCGTGTTCAAGGATGCTAGGTACTGGATCCGAGGGCGCACGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 90 bp | ATGATGTCCACAGACGTGCGCCCTCGGATCCAGTACCTAGCATCCTaGAACACGGCGGTGTCTCCTGTTCTGAACCAGCCATCGGAAGTG | + |
Preference number: 6 (lower is better) Translates to: MMSTDVRPRIQYLAS*NTAVSPVLNQPSEV Trigger: CACTTCCGATGGCTGGTTCAGAACAGGAGACACCGCCGTGTTCAAGGATGCTAGGTACTGGATCCGAGGGCGCACGTCTGTGGACATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 90 bp | TGTCCTGAGGGGTACAACTGTTTGAGCAGCTCCTTCTTATTCACCTaGCCCATCTGGTTCCGGGGGATCTCCTCCACCAGCAGGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: CPEGYNCLSSSFLFT*PIWFRGISSTSRSS Trigger: GGAGCTCCTGCTGGTGGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCTCAGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 72 bp | TTGACCACGCCGTGGACATGGTGCAGCGGGAGGACGTaGAGGATCACATCGTTTTTAGTCCACGCCCATGAG | + |
Preference number: 6 (lower is better) Translates to: LTTPWTWCSGRT*RITSFLVHAHE Trigger: CTCATGGGCGTGGACTAAAAACGATGTGATCCTTCACGTCCTCCCGCTGCACCATGTCCACGGCGTGGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 72 bp | TCCTTGAGATCCCCGTGGGACAGTGAATGTCCTTCTTaGAGAGCAACCACAGCTGTGACCCGCTGGCCCCAT | + |
Preference number: 6 (lower is better) Translates to: SLRSPWDSECPS*RATTAVTRWPH Trigger: ATGGGGCCAGCGGGTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGGATCTCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | AAAGAGCTCCGGGAGTCCTGGATGAAATACTCCAGCTaGGCCTCAGGGTGCTTCCAGTACAGTGGGACAGCA | + |
Preference number: 6 (lower is better) Translates to: KELRESWMKYSS*ASGCFQYSGTA Trigger: TGCTGTCCCACTGTACTGGAAGCACCCTGAGGCCCAGCTGGAGTATTTCATCCAGGACTCCCGGAGCTCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | TGTTTGAGCAGCTCCTTCTTATTCACCTTGCCCATCTaGTTCCGGGGGATCTCCTCCACCAGCAGGAGCTCC | + |
Preference number: 6 (lower is better) Translates to: CLSSSFLFTLPI*FRGISSTSRSS Trigger: GGAGCTCCTGCTGGTGGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGAGCTGCTCAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 72 bp | ACCCTTTCTTCCTGGAGGTCCCCAACTTTACAACCCTaGAGCCTGCAGATCTCCTGGGCCAGACAAAGGCTG | + |
Preference number: 6 (lower is better) Translates to: TLSSWRSPTLQP*SLQISWARQRL Trigger: CAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGGGGACCTCCAGGAAGAAAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 72 bp | ACCTCTGGCCCACTCCTTGAGATCCCCGTGGGACAGTaGATGTCCTTCTTGAAGAGCAACCACAGCTGTGAC | + |
Preference number: 6 (lower is better) Translates to: TSGPLLEIPVGQ*MSFLKSNHSCD Trigger: GTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 72 bp | CTACCTGGCCCACTCCTTGAGATCCCCGTGGGACAGTaGATGTCCTTCTTGAAGAGCAACCACAGCTGTGAC | + |
Preference number: 6 (lower is better) Translates to: LPGPLLEIPVGQ*MSFLKSNHSCD Trigger: GTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGTCCCACGGGGATCTCAAGGAGTGGGCCAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212781.2 |
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CDS GCA 72 bp | CTTCCTGGAGGTCCCCAACTTTACAACCCTGAAGCCTaGAGATCTCCTGGGCCAGACAAAGGCTGCGATCAT | + |
Preference number: 6 (lower is better) Translates to: LPGGPQLYNPEA*RSPGPDKGCDH Trigger: ATGATCGCAGCCTTTGTCTGGCCCAGGAGATCTGCAGGCTTCAGGGTTGTAAAGTTGGGGACCTCCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CAA 72 bp | GGGTACAACTGTTTGAGCAGCTCCTTCTTATTCACCTaGCCCATCTGGTTCCGGGGGATCTCCTCCACCAGC | + |
Preference number: 6 (lower is better) Translates to: GYNCLSSSFLFT*PIWFRGISSTS Trigger: GCTGGTGGAGGAGATCCCCCGGAACCAGATGGGCAAGGTGAATAAGAAGGAGCTGCTCAAACAGTTGTACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 72 bp | CTGGCTGGCTCCTCTGTCCTGAGGGGTACAACTGTTTaGGCAGCTCCTTCTTATTCACCTTGCCCATCTGGT | + |
Preference number: 6 (lower is better) Translates to: LAGSSVLRGTTV*AAPSYSPCPSG Trigger: ACCAGATGGGCAAGGTGAATAAGAAGGAGCTGCTCAAACAGTTGTACCCCTCAGGACAGAGGAGCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015160.6 ENSMUST00000212790.2 |
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CDS TCA 72 bp | ACAGTGAATGTCCTTCTTGAAGAGCAACCACAGCTGTaGCCCGCTGGCCCCATGTCATATCAGGAACTCCAA | + |
Preference number: 6 (lower is better) Translates to: TVNVLLEEQPQL*PAGPMSYQELQ Trigger: TTGGAGTTCCTGATATGACATGGGGCCAGCGGGTCACAGCTGTGGTTGCTCTTCAAGAAGGACATTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS CCA 72 bp | CCAGCCATCGGAAGTGAAAGCACTTTTCGTTTCTTCTaGCTTATCCCAGTATTCTCGGAACACCGAGGGTCC | + |
Preference number: 6 (lower is better) Translates to: PAIGSESTFRFF*LIPVFSEHRGS Trigger: GGACCCTCGGTGTTCCGAGAATACTGGGATAAGCCAGAAGAAACGAAAAGTGCTTTCACTTCCGATGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |
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CDS TCA 72 bp | AAACTGCACGCACAAAATCCTGGACATGGGGCTGCGTaGAATGCTTGTCATAGTAGTCCAGCAGCTTGCTGT | + |
Preference number: 6 (lower is better) Translates to: KLHAQNPGHGAA*NACHSSPAACC Trigger: ACAGCAAGCTGCTGGACTACTATGACAAGCATTTCACGCAGCCCCATGTCCAGGATTTTGTGCGTGCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015160.6 ENSMUST00000212781.2 ENSMUST00000212790.2 |