Pregenerated sensors for ACSF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076435Ensembl transcript IDs: ENSMUST00000103164.4
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGCTCTaGGAGGGCTGGGAGGACCCTCCTTTGTGTGGGAGGGCTGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ESWEEPPLCGRAEGL*EGWEDPPLCGRAEG Trigger: CCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCCCAGCCCTCCCAGAGCCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR CCA 90 bp | GAGGGCTGTGAGGACCCTCCTTTGTGTGGGAGGGCTGAGGGGCTCTaGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: EGCEDPPLCGRAEGL*ESWEEPPLCGRAEG Trigger: CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCACAGCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR TCA 90 bp | CCCGGAGGCAGGGGCAATGAGATCTCTTTAAGTTCGAAACCAGCCTaGTCTACCCTGTGCAACCAGGGGTACAGAGGACGATCCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: PGGRGNEISLSSKPA*STLCNQGYRGRSCL Trigger: GAGACAGGATCGTCCTCTGTACCCCTGGTTGCACAGGGTAGATCAGGCTGGTTTCGAACTTAAAGAGATCTCATTGCCCCTGCCTCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCCATCACACAAGAGCTACAGAGTGAGCACACCAGCCAGACACTGGCCAAGGGCTGAGGGGCTCTaGGAGGGCTGGGAGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: PSPSHKSYRVSTPARHWPRAEGL*EGWEDP Trigger: AGGGTCCTCCCAGCCCTCCCAGAGCCCCTCAGCCCT...TGGCCAGTGTCTGGCTGGTGTGCTCACTCTGTAGCTCTTGTGTGATGGAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCTTATGTATTCGTGAGGGGCGGGCTCTGGGAGAGCTaGGAGGACTCTCCTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLGRECRPGKGAYVFVRGGLWES*EDSPLC Trigger: ACACAAAGGAGAGTCCTCTCAGCTCTCCCAGAGCCC...GCCCCTCACGAATACATAAGCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCTTTGTGTGGGAGGACTaGGGGGCTCTGGGGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: FNNKTIIIGPGVQAREGCFVWED*GALGRT Trigger: GGTCCTCCCCAGAGCCCCTCAGTCCTCCCACACAAA...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGAGACGACAAGGGGCCTaGGGAGGACTCGGGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GLKGSCELPNVGARNQTQRRQGA*GGLGAL Trigger: GAGGGCCCCGAGTCCTCCTCAGGCCCCTTGTCGTCT...CTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTGGGCTCTGGGAGGGCTaGGAGGACCCTCCTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSGLWEG*EDPPLC Trigger: ACACAAAGGAGGGTCCTCCCAGCCCTCCCAGAGCCC...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCGGGCTCTGGGAGAGCTaGGAGGAACCTCCTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: FNNKTIIIGPGVQAREGCGLWES*EEPPLC Trigger: ACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCC...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTGCTCTGGGAGGGCTATaGGGACCCTCCTTTTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSALGGL*GPSFLW Trigger: CCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGC...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGTCTGAGGGTGCTGGCTaGCCTCCTGTCTCTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWSEGAG*PPVSSL Trigger: AAGGGAAGAGACAGGAGGGCAGCCAGCACCCTCAGA...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTCAGGCCAGGGAAGGGTaGTTATGTATTCGTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSQAREG*LCIREG Trigger: CCCCTCACGAATACATAAGCACCCTTCCCTGGCCTG...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTACACCAGCCAGACACTaGCCAAACAGGGAAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSTPARH*PNREVF Trigger: AAAGACTTCCCTGTTTGGCCAGTGTCTGGCTGGTGT...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGAAAATAAGGGTGGCTTaGAATTTCAAGAGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWKIRVA*NFKRTE Trigger: CTCTGTCCTCTTGAAATTCCAAGCCACCCTTATTTT...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGCAGTCAGTCCTCTTAACCACTGAGCCCCCTCTCCAGCACTCAAAACTGTGGGAGGAACCTCCTTaGTGTGGGAGGGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GEQSVLLTTEPPLQHSKLWEEPP*CGRAEG Trigger: CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCA...CAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CAA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCTGGGAGGACCCTCCTTaGTGTGGGAGGGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: FNNKTIIIGPGVQAREGCWEDPP*CGRAEG Trigger: CCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCCCA...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR-3UTR CAA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTTGTGAGGACCCTCCTTaGTGTGGGAGGGCTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSCEDPP*CGRAEG Trigger: CCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCACA...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR TCA 72 bp | GTCTCTTCCCTTCTCCATCACACAAGAGCTACAGAGTaGGCACACCAGCCAGACACTGGCCAAACAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VSSLLHHTRATE*AHQPDTGQTGK Trigger: CTTCCCTGTTTGGCCAGTGTCTGGCTGGTGTGCTCACTCTGTAGCTCTTGTGTGATGGAGAAGGGAAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR TCA 72 bp | GGGAGTGCAGGCCAGGGAAGGGTGCTTATGTATTCGTaGGGGGCTTTAAGGTTCCCAGCCTTGGAAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: GSAGQGRVLMYS*GALRFPALENK Trigger: CTTGTTTTCCAAGGCTGGGAACCTTAAAGCCCCTCACGAATACATAAGCACCCTTCCCTGGCCTGCACTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR CCA 72 bp | CACAAGAGCTACAGAGTGAGCACACCAGCCAGACACTaGCCAAACAGGGAAGTCTTTACACCAAGTCACAAA | + |
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Preference number: 3 (lower is better) Translates to: HKSYRVSTPARH*PNREVFTPSHK Trigger: TTTGTGACTTGGTGTAAAGACTTCCCTGTTTGGCCAGTGTCTGGCTGGTGTGCTCACTCTGTAGCTCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR TCA 72 bp | AGATCTTCTGGGAGAGCAGTCAGTCCTCTTAACCACTaGGCCCCCTCTCCAGCACTCAAAACTGTTATTTCA | + |
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Preference number: 3 (lower is better) Translates to: RSSGRAVSPLNH*APSPALKTVIS Trigger: TGAAATAACAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCCCAGAAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | TCTGGGAGGGCTGGGAGGACCCTCCTTTGTGTGGGAGGGCTGAGGGGCTCTGGGGGCCCTGAATGTAGCTaGGGCCTCCGATGGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SGRAGRTLLCVGGLRGSGGPECS*GLRWAR Trigger: CCTTGCCCATCGGAGGCCTCAGCTACATTCAGGGCC...CCCAGAGCCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCCCAGCCCTCCCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GAGGGGCTCTGGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGAGTTGGGTCCCCACATaGCCAGCCGGTCACCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EGLWESWEEPPLCGRAEGSWVPT*PAGHPC Trigger: GCAAGGGTGACCGGCTGGGCATGTGGGGACCCAACT...CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTCTGGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGCAATTCCGGGGGTGCTaGGGACCCAGCAATCACACC | + |
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Preference number: 4 (lower is better) Translates to: EGLWESWEEPPLCGRAEGQFRGC*GPSNHT Trigger: GGTGTGATTGCTGGGTCCCCAGCACCCCCGGAATTG...CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | TCTGGGAGGGCTGGGAGGACCCTCCTTTGTGTGGGAGGGCTGAGGGGCTCTGGGTCTCACCGCCACGGATaGTCATATCCTTCGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGRAGRTLLCVGGLRGSGSHRHG*SYPSIG Trigger: GCCGATCGAAGGATATGATCATCCGTGGCGGTGAGA...CCCAGAGCCCCTCAGCCCTCCCACACAAAGGAGGGTCCTCCCAGCCCTCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGGGCTCTGGGAGGGCCCAGCCGGTCACCCTTaGGGAGGCCAATGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: EGYEDPPFCGRTEGLWEGPAGHP*GGQCSE Trigger: TTCTGAGCATTGGCCTCCGCAAGGGTGACCGGCTGG...GCCCTCCCAGAGCCCCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTCTGGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGACTCTTCAAGGCCCCTaGCTGAGCCTTTTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EGLWESWEEPPLCGRAEGTLQGP*LSLFQL Trigger: GAGCTGGAAAAGGCTCAGCCAGGGGCCTTGAAGAGT...CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGGGCTCTGGGAGGGCCCCAGTAGCCCTGCATaGCGCAGTACCCTCGGATAT | + |
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Preference number: 4 (lower is better) Translates to: EGYEDPPFCGRTEGLWEGPSSPA*RSTLGY Trigger: ATATCCGAGGGTACTGCGTCATGCAGGGCTACTGGG...GCCCTCCCAGAGCCCCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACACCAGGATGATGCCTaGCTGGGCAGTAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGHQDDA*LGSSQL Trigger: CAGCTGGCTACTGCCCAGGCAGGCATCATCCTGGTG...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGATTCACCCCAACCACCTaGGCTTCCTGCACCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGFTPTT*ASCTCG Trigger: CCCACAGGTGCAGGAAGCGCAGGTGGTTGGGGTGAA...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGGGCTCTGGGAGGGCTCACCATTCCAGAACTaGGAGCGCGGACACTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGYEDPPFCGRTEGLWEGSPFQN*ERGHSA Trigger: TGCAGAGTGTCCGCGCTCTCAGTTCTGGAATGGTGA...GCCCTCCCAGAGCCCCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGTGTCCACCTCCTCCTTaGGCTGCGCAAAGTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRGSGRAMRTLLFVGGLRCPPPP*AAQSSA Trigger: GGCTGAACTTTGCGCAGCTCAAGGAGGAGGTGGACA...CCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTTTGCAGAAAGCTTTaGTCTCCTCCGCCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGLCRKL*SPPPWW Trigger: CCACCACGGCGGAGGAGATCAAAGCTTTCTGCAAAG...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GAGGGGCTCTGGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGTCTGCTCTCGGAGTTTaGATTTCTGGATCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: EGLWESWEEPPLCGRAEGSALGV*ISGSFL Trigger: CAGGAAAGATCCAGAAATTCAAACTCCGAGAGCAGA...CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACAAACATCGTGGGTGTaGCATACAGGAGGGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGQTSWV*HTGGCL Trigger: AAGGCACCCTCCTGTATGGCACACCCACGATGTTTG...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GAGGGGCTCTGGGAGAGCTGGGAGGAACCTCCTTTGTGTGGGAGGGCTGAGGGGAGATGCTGTTCCATCTaGTCTCGGAGTTTGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: EGLWESWEEPPLCGRAEGRCCSI*SRSLNF Trigger: GAAATTCAAACTCCGAGAGCAGATGGAACAGCATCT...CCCCTCAGCCCTCCCACACAAAGGAGGTTCCTCCCAGCTCTCCCAGAGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GGAGAGCAGTCAGTCCTCTTAACCACTGAGCCCCCTCTCCAGCACTCAAAACTGAAAGAGTGGCCCCCTTaGGGTTTCCAGTTGTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GEQSVLLTTEPPLQHSKLKEWPP*GFQLSP Trigger: CGGGGACAACTGGAAACCCCAAGGGGGCCACTCTTT...CAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGATTTACGATGTTGTGGTaGGAAAGAGTGGCCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGFTMLW*ERVAPL Trigger: CAAGGGGGCCACTCTTTCCCACCACAACATCGTAAA...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | CCTTCTCCATCACACAAGAGCTACAGAGTGAGCACACCAGCCAGACACTGGCCACTCGAAGGTCTTCTGTaGCTCACCCCAGTAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PSPSHKSYRVSTPARHWPLEGLL*LTPVAL Trigger: CAGGGCTACTGGGGTGAGCCACAGAAGACCTTCGAG...TGGCCAGTGTCTGGCTGGTGTGCTCACTCTGTAGCTCTTGTGTGATGGAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | ACCAGCCTGATCTACCCTGTGCAACCAGGGGTACAGAGGACGATCCTGTCTCAAATCTGGGCCTCCGTGTaGGGCATAATTCTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: TSLIYPVQPGVQRTILSQIWASV*GIILPT Trigger: TGTGGGCAGAATTATGCCTCACACGGAGGCCCAGAT...TTGAGACAGGATCGTCCTCTGTACCCCTGGTTGCACAGGGTAGATCAGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTGCACCTGTGGGTGCTTaGGGAAGAAGTCCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPAPVGA*GRSPPA Trigger: AGCTGGAGGACTTCTTCCTCAAGCACCCACAGGTGC...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | CTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGTTTCTGGATCTTTCCTaGGATGGTGAGAGGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: LRGSGRAMRTLLFVGGLRFLDLS*DGERIA Trigger: GGCTATCCTCTCACCATCTCAGGAAAGATCCAGAAA...CCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGAGCTGATGGCTTCCAATaGCTTCTTGCCATTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGADGFQ*LLAIEA Trigger: AGCTTCAATGGCAAGAAGGCATTGGAAGCCATCAGC...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGAGACTGTAGTCAGGTCTaGGAGTCTCTCACTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGDCSQV*ESLTLQ Trigger: TTGAAGAGTGAGAGACTCCCAGACCTGACTACAGTC...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGCTTGCCATTGAAGCTTaGAGAAGACAGGAGGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LRGSGRAMRTLLFVGGLRLAIEA*RRQEES Trigger: ACTCTCCTCCTGTCTTCTCCAAGCTTCAATGGCAAG...CCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | ACCAGCCTGATCTACCCTGTGCAACCAGGGGTACAGAGGACGATCCTGTCTCAACGCTTCCTGCACCTGTaGGTGCTTGAGGAAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSLIYPVQPGVQRTILSQRFLHL*VLEEEV Trigger: GACTTCTTCCTCAAGCACCCACAGGTGCAGGAAGCG...TTGAGACAGGATCGTCCTCTGTACCCCTGGTTGCACAGGGTAGATCAGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGAGAGCAGTCAGTCCTCTTAACCACTGAGCCCCCTCTCCAGCACTCAAAACTGATCGGCCGACGATCTTaGAGAAGCCCTGTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GEQSVLLTTEPPLQHSKLIGRRS*RSPVHP Trigger: TGGATGAACAGGGCTTCTGCAAGATCGTCGGCCGAT...CAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTCCTCTGCAGTCTTTGTaGGCATCTTCAGACGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPPLQSL*ASSDAG Trigger: GCCAGCGTCTGAAGATGCCCACAAAGACTGCAGAGG...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GGACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGCCCAGGCATAGGAGTTaGGTCCCCACATGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGSCELPNVGARNQTQPRHRS*VPTCPA Trigger: GGCTGGGCATGTGGGGACCCAACTCCTATGCCTGGG...CTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACGGAGTTTGAATTTCTaGATCTTTCCTGAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGRSLNF*IFPEMV Trigger: CACCATCTCAGGAAAGATCCAGAAATTCAAACTCCG...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| 3UTR CAA 72 bp | CACGCAGGGGGCACAGAGGCCAGAAGAGATCATCCATaGTCTGTAGGTGGACTTAAAGGTAGTTGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HAGGTEARRDHP*SVGGLKGSCEL Trigger: CAGCTCACAACTACCTTTAAGTCCACCTACAGACAATGGATGATCTCTTCTGGCCTCTGTGCCCCCTGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTTGCAGCCTACCTTTCTaGGGACATATTCCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPCSLPF*GHIPVL Trigger: CAGAACTGGAATATGTCCTCAGAAAGGTAGGCTGCA...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GGAGAGCAGTCAGTCCTCTTAACCACTGAGCCCCCTCTCCAGCACTCAAAACTGAGTACTGCTGGGTCTTaGATTGTTTGGGAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: GEQSVLLTTEPPLQHSKLSTAGS*IVWETQ Trigger: TTGTGTTTCCCAAACAATTCAAGACCCAGCAGTACT...CAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GGACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGCCTTGCGGAGGCCAATaGTCAGAAGACCAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKGSCELPNVGARNQTQPCGGQ*SEDQKQ Trigger: CTGCTTCTGGTCTTCTGAGCATTGGCCTCCGCAAGG...CTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCCAAGCGCAACTCCTCTaGAGTCTTTGTGGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNNKTIIIGPGVQAREGCQAQLL*SLCGHL Trigger: AAGATGCCCACAAAGACTGCAGAGGAGTTGCGCTTG...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCACAATTTGACCACCTGCGCTTCCTaGACCTGTGGGTGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENKQNRTLISGLICGHNLTTCAS*TCGCLR Trigger: CCTCAAGCACCCACAGGTGCAGGAAGCGCAGGTGGT...CAAATTGTGGCCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGACAGAGGGGCATCCACTaGGATGACTGTAGTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLKVVVSCQMWVLGIKLRQRGIH*DDCSQV Trigger: GACCTGACTACAGTCATCTCAGTGGATGCCCCTCTG...TCTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTCTCCACGAATGCTTGTaGAATCATAACTGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPLHECL*NHNWRS Trigger: ACTTCTCCAGTTATGATTTCACAAGCATTCGTGGAG...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | CCTTCTCCATCACACAAGAGCTACAGAGTGAGCACACCAGCCAGACACTGGCCAATAACTGGAGAAGTCTaGCTGATTCAGAATATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPSHKSYRVSTPARHWPITGEV*LIQNIH Trigger: GTGGATATTCTGAATCAGCCAGACTTCTCCAGTTAT...TGGCCAGTGTCTGGCTGGTGTGCTCACTCTGTAGCTCTTGTGTGATGGAGAAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTCGGGACTGTTCTCTGTaGTTCCATAAACAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSRDCSL*FHKQPP Trigger: TGGTGGTTGTTTATGGAACCACAGAGAACAGTCCCG...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCCGGGGAATCTTAAAGTaGGAAATCTTCCCTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FNNKTIIIGPGVQAREGCRGILK*EIFPLQ Trigger: CTGCAAAGGGAAGATTTCCCACTTTAAGATTCCCCG...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCTGGAGAAGTCTGGCTaGTTCAGAATATCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWLEKSG*FRISTN Trigger: GTTTGTGGATATTCTGAATCAGCCAGACTTCTCCAG...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR GCA 90 bp | GAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCACAATTTGGAAGTCCTCCAGCTCTaGAGGGTAGATGTTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: ENKQNRTLISGLICGHNLEVLQL*RVDVLT Trigger: GGTGAGAACATCTACCCTGCAGAGCTGGAGGACTTC...CAAATTGTGGCCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGATTGTTTACGATGTTGTaGTGGGAAAGAGTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLKVVVSCQMWVLGIKLRLFTML*WERVAP Trigger: GGGGGCCACTCTTTCCCACCACAACATCGTAAACAA...TCTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR TCA 90 bp | GAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCACAATTTGTGCCTTTCTCTCTGCTaGTGGCTTCCAATGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENKQNRTLISGLICGHNLCLSLC*WLPMPS Trigger: AGAAGGCATTGGAAGCCATCAGCAGAGAGAAAGGCA...CAAATTGTGGCCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CCA 90 bp | GACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGAAGCCTGATGTTTTCATaGAGGATAACCAAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLKVVVSCQMWVLGIKLRSLMFS*RITKAS Trigger: AGAGGCTTTGGTTATCCTCCATGAAAACATCAGGCT...TCTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | CCCAGGCATAGGAGTTGGGTCCCCACATGCCCAGCCGGTCACCCTTaGGGAGGCCAATGCTCAGAAGACCAGAAGCAGCTTTGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PRHRSWVPTCPAGHP*GGQCSEDQKQLCPP Trigger: AGGTGGACAAAGCTGCTTCTGGTCTTCTGAGCATTGGCCTCCGCAAGGGTGACCGGCTGGGCATGTGGGGACCCAACTCCTATGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | CGACCGTCTCGAAGGTCTTCTGTGGCTCACCCCAGTAGCCCTGCATaGCGCAGTACCCTCGGATATACAGCTCCCCAGGCACGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSRRSSVAHPSSPA*RSTLGYTAPQARSG Trigger: ACCTGAACGTGCCTGGGGAGCTGTATATCCGAGGGTACTGCGTCATGCAGGGCTACTGGGGTGAGCCACAGAAGACCTTCGAGACGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | ACAAGAACCGCTGGTTGTACCGCAGCTGGGCTAGGTTCTGTTCCTTaGCACCGGCTGCCACAATATCATCCAGGAGCAGGGTCCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TRTAGCTAAGLGSVP*HRLPQYHPGAGSPA Trigger: TGCCGGGGACCCTGCTCCTGGATGATATTGTGGCAGCCGGTGGCAAGGAACAGAACCTAGCCCAGCTGCGGTACAACCAGCGGTTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | GAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGGGCTCTGGGAGGGCTTGTCCACCTCCTCCTaGAGCTGCGCAAAGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGYEDPPFCGRTEGLWEGLSTSS*SCAKFS Trigger: GCTGAACTTTGCGCAGCTCAAGGAGGAGGTGGACAA...GCCCTCCCAGAGCCCCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | TTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCTTATGTATTCGTGAGGGGCGAAAGAGTGGCCCCCTaGGGGTTTCCAGTTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGRECRPGKGAYVFVRGERVAP*GFPVVP Trigger: GGGGACAACTGGAAACCCCAAGGGGGCCACTCTTTC...GCCCCTCACGAATACATAAGCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | GAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGGGCTCTGGGAGGGCACTCCTCTGCAGTCTTaGTGGGCATCTTCAGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGYEDPPFCGRTEGLWEGTPLQS*WASSDA Trigger: AGCGTCTGAAGATGCCCACAAAGACTGCAGAGGAGT...GCCCTCCCAGAGCCCCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | CTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGACTGAGGCCTTTGCAGAAAGCTTaGATCTCCTCCGCCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRGSGRAMRTLLFVGGLRPLQKA*ISSAVV Trigger: CACCACGGCGGAGGAGATCAAAGCTTTCTGCAAAGG...CCTCAGTCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | CAGTTGTGTTCACAAGATGGGAGTCGGTGTGGCCCTGAATGTAGCTaGGGCCTCCGATGGGCAAGGGGTTGGTGCAGTTCACCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLCSQDGSRCGPECS*GLRWARGWCSSPFQ Trigger: CTGGAATGGTGAACTGCACCAACCCCTTGCCCATCGGAGGCCTCAGCTACATTCAGGGCCACACCGACTCCCATCTTGTGAACACAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | CACAATATCATCCAGGAGCAGGGTCCCCGGCAGAGGGGCATCCACTaGGATGACTGTAGTCAGGTCTGGGAGTCTCTCACTCTTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HNIIQEQGPRQRGIH*DDCSQVWESLTLQG Trigger: GCCTTGAAGAGTGAGAGACTCCCAGACCTGACTACAGTCATCTCAGTGGATGCCCCTCTGCCGGGGACCCTGCTCCTGGATGATATTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | TTGGTCAGCTCACCCGTCTCCACATTCACAATCTGGGCCTCCGTGTaGGGCATAATTCTGCCCACACTACCAGCCTTCTGCTCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSSPVSTFTIWASV*GIILPTLPAFCSRV Trigger: CACCCTGGAGCAGAAGGCTGGTAGTGTGGGCAGAATTATGCCTCACACGGAGGCCCAGATTGTGAATGTGGAGACGGGTGAGCTGACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | CGCTTCCTGCACCTGTGGGTGCTTGAGGAAGAAGTCCTCCAGCTCTaGAGGGTAGATGTTCTCACCGCCACGGATGATCATATCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RFLHLWVLEEEVLQL*RVDVLTATDDHILR Trigger: TCGAAGGATATGATCATCCGTGGCGGTGAGAACATCTACCCTGCAGAGCTGGAGGACTTCTTCCTCAAGCACCCACAGGTGCAGGAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | TCCACCTCCTCCTTGAGCTGCGCAAAGTTCAGCCTGATGTTTTCATaGAGGATAACCAAAGCCTCTCTGTCGGGGAACCTCTGCGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: STSSLSCAKFSLMFS*RITKASLSGNLCAV Trigger: CACGGCGCAGAGGTTCCCCGACAGAGAGGCTTTGGTTATCCTCCATGAAAACATCAGGCTGAACTTTGCGCAGCTCAAGGAGGAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | GATGACTGTAGTCAGGTCTGGGAGTCTCTCACTCTTCAAGGCCCCTaGCTGAGCCTTTTCCAGCTCAGGACAGACCTGCTTCAGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DDCSQVWESLTLQGP*LSLFQLRTDLLQDV Trigger: GACATCCTGAAGCAGGTCTGTCCTGAGCTGGAAAAGGCTCAGCCAGGGGCCTTGAAGAGTGAGAGACTCCCAGACCTGACTACAGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | TGTCCGATACCACTTGTCTTGTCCGACCGTCTCGAAGGTCTTCTGTaGCTCACCCCAGTAGCCCTGCATGACGCAGTACCCTCGGATATA | + |
|
Preference number: 5 (lower is better) Translates to: CPIPLVLSDRLEGLL*LTPVALHDAVPSDI Trigger: TATATCCGAGGGTACTGCGTCATGCAGGGCTACTGGGGTGAGCCACAGAAGACCTTCGAGACGGTCGGACAAGACAAGTGGTATCGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | GGAGAGCAGTCAGTCCTCTTAACCACTGAGCCCCCTCTCCAGCACTCAAAACTGGGCACTCGCCCACAGTaGTGTTCACAAGATGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GEQSVLLTTEPPLQHSKLGTRPQ*CSQDGS Trigger: ACTCCCATCTTGTGAACACAACTGTGGGCGAGTGCC...CAGTTTTGAGTGCTGGAGAGGGGGCTCAGTGGTTAAGAGGACTGACTGCTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCCAGCCGGTCACCCTaGCGGAGGCCAATGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWPSRSP*RRPMLR Trigger: TCTGAGCATTGGCCTCCGCAAGGGTGACCGGCTGGG...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTGATCGGCCGACGATCTaGCAGAAGCCCTGTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPDRPTI*QKPCSS Trigger: GGATGAACAGGGCTTCTGCAAGATCGTCGGCCGATC...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | AGAAGTCCTCCAGCTCTGCAGGGTAGATGTTCTCACCGCCACGGATaGTCATATCCTTCGATCGGCCGACGATCTTGCAGAAGCCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSPPALQGRCSHRHG*SYPSIGRRSCRSPV Trigger: AACAGGGCTTCTGCAAGATCGTCGGCCGATCGAAGGATATGATCATCCGTGGCGGTGAGAACATCTACCCTGCAGAGCTGGAGGACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | ATGTTTTCATGGAGGATAACCAAAGCCTCTCTGTCGGGGAACCTCTaGGCCGTGGCGTCAAGGCACTCGCCCACAGTTGTGTTCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MFSWRITKASLSGNL*AVASRHSPTVVFTR Trigger: TCTTGTGAACACAACTGTGGGCGAGTGCCTTGACGCCACGGCGCAGAGGTTCCCCGACAGAGAGGCTTTGGTTATCCTCCATGAAAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | CCTCTGCAGTCTTTGTGGGCATCTTCAGACGCTGGCCTATCAGCATaGAGTTGTTTACGATGTTGTGGTGGGAAAGAGTGGCCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQSLWASSDAGLSA*SCLRCCGGKEWPPW Trigger: CCAAGGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCACAAAGACTGCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | CCACACTACCAGCCTTCTGCTCCAGGGTGTCCTCGGGAAAGTTCATaGAGGTCACGGGACTGTTCTCTGTGGTTCCATAAACAACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PHYQPSAPGCPRESS*RSRDCSLWFHKQPP Trigger: TGGTGGTTGTTTATGGAACCACAGAGAACAGTCCCGTGACCTTCATGAACTTTCCCGAGGACACCCTGGAGCAGAAGGCTGGTAGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | TGTGCCATACAGGAGGGTGCCTTTCTCTCTGCTGATGGCTTCCAATaGCTTCTTGCCATTGAAGCTTGGAGAAGACAGGAGGAGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAIQEGAFLSADGFQ*LLAIEAWRRQEESG Trigger: GCCACTCTCCTCCTGTCTTCTCCAAGCTTCAATGGCAAGAAGGCATTGGAAGCCATCAGCAGAGAGAAAGGCACCCTCCTGTATGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCGATGGGCAAGGGGTaGGTGCAGTTCACCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWPMGKG*VQFTIP Trigger: TGGAATGGTGAACTGCACCAACCCCTTGCCCATCGG...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | GGAGGACTGAGGGGCTCTGGGAGGGCTATGAGGACCCTCCTTTTTGTGGGAGGATGGGTCTTGAATTGTTaGGGAAACACAATACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLRGSGRAMRTLLFVGGWVLNC*GNTIPL Trigger: CAAAGGTATTGTGTTTCCCAAACAATTCAAGACCCA...TCCTCCCACAAAAAGGAGGGTCCTCATAGCCCTCCCAGAGCCCCTCAGTCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 90 bp | CACAATACCTTTGCAGCCTACCTTTCTGAGGACATATTCCAGTTCTaGGGACTGGTAGGCTGGGTTCACAGACACCAGGATGATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HNTFAAYLSEDIFQF*GLVGWVHRHQDDAC Trigger: GCAGGCATCATCCTGGTGTCTGTGAACCCAGCCTACCAGTCCTCAGAACTGGAATATGTCCTCAGAAAGGTAGGCTGCAAAGGTATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 90 bp | CTTCATGTTCATCTTGTTGATGATGGCTCGAATCAATTCCGGGGGTaGTGGGGACCCAGCAATCACACCTCCACGAATGCTTGTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LHVHLVDDGSNQFRG*WGPSNHTSTNACEI Trigger: GATTTCACAAGCATTCGTGGAGGTGTGATTGCTGGGTCCCCAGCACCCCCGGAATTGATTCGAGCCATCATCAACAAGATGAACATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | AATGCACAGACAGCAAAGTGCTGGGAAATTAGGTCTGAGGGTGCTGGCTGCCCTCTGCTGGGTCTTGAATaGTTTGGGAAACACAATACC | + |
|
Preference number: 5 (lower is better) Translates to: NAQTAKCWEIRSEGAGCPLLGLE*FGKHNT Trigger: GGTATTGTGTTTCCCAAACAATTCAAGACCCAGCAG...AGGGCAGCCAGCACCCTCAGACCTAATTTCCCAGCACTTTGCTGTCTGTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | TTCAACAACAAAACAATAATTATTGGGCCGGGAGTGCAGGCCAGGGAAGGGTGCGAGTTGTTTACGATGTaGTGGTGGGAAAGAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FNNKTIIIGPGVQAREGCELFTM*WWERVA Trigger: GGCCACTCTTTCCCACCACAACATCGTAAACAACTC...GCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTTTTGTTGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | TTTCTCTCTGCTGATGGCTTCCAATGCCTTCTTGCCATTGAAGCTTaGAGAAGACAGGAGGAGAGTGGCACCATGCATCATAGACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSADGFQCLLAIEA*RRQEESGTMHHRHH Trigger: ATGGTGTCTATGATGCATGGTGCCACTCTCCTCCTGTCTTCTCCAAGCTTCAATGGCAAGAAGGCATTGGAAGCCATCAGCAGAGAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 90 bp | CATGTTCATCTTGTTGATGATGGCTCGAATCAATTCCGGGGGTGCTaGGGACCCAGCAATCACACCTCCACGAATGCTTGTGAAATCATA | + |
|
Preference number: 5 (lower is better) Translates to: HVHLVDDGSNQFRGC*GPSNHTSTNACEII Trigger: TATGATTTCACAAGCATTCGTGGAGGTGTGATTGCTGGGTCCCCAGCACCCCCGGAATTGATTCGAGCCATCATCAACAAGATGAACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | GAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCACAATTTGTGCACCTGTGGGTGCTaGAGGAAGAAGTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ENKQNRTLISGLICGHNLCTCGC*RKKSSS Trigger: GCTGGAGGACTTCTTCCTCAAGCACCCACAGGTGCA...CAAATTGTGGCCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS-3UTR CAA 90 bp | TGCCAAATGTGGGTGCTAGGAATCAAACTCAGATCTTCTGGGAGAGCAGTCAGTGGAAACACAATACCTTaGCAGCCTACCTTTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CQMWVLGIKLRSSGRAVSGNTIP*QPTFLR Trigger: CCTCAGAAAGGTAGGCTGCAAAGGTATTGTGTTTCC...ACTGACTGCTCTCCCAGAAGATCTGAGTTTGATTCCTAGCACCCACATTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGAATGCCTTCTTGCCATaGAAGCTTGGAGAAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWNAFLP*KLGEDR Trigger: CCTGTCTTCTCCAAGCTTCAATGGCAAGAAGGCATT...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCTTGGAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGGCTTCCAATGCCTTCTaGCCATTGAAGCTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLGKQAKQNPHFWTDLWASNAF*PLKLGE Trigger: TTCTCCAAGCTTCAATGGCAAGAAGGCATTGGAAGC...CCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTCCAAGGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS TCA 90 bp | ATGCTGTTCCATCTGCTCTCGGAGTTTGAATTTCTGGATCTTTCCTaGGATGGTGAGAGGATAGCCTTCAACAAACACGATGTATCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MLFHLLSEFEFLDLS*DGERIAFNKHDVSG Trigger: CCCCGATACATCGTGTTTGTTGAAGGCTATCCTCTCACCATCTCAGGAAAGATCCAGAAATTCAAACTCCGAGAGCAGATGGAACAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 90 bp | AATCACACCTCCACGAATGCTTGTGAAATCATAACTGGAGAAGTCTaGCTGATTCAGAATATCCACAAACATCGTGGGTGTGCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: NHTSTNACEIITGEV*LIQNIHKHRGCAIQ Trigger: CTGTATGGCACACCCACGATGTTTGTGGATATTCTGAATCAGCCAGACTTCTCCAGTTATGATTTCACAAGCATTCGTGGAGGTGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | GACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGATGGGAAATCTTCCCTTaGCAGAAAGCTTTGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLKVVVSCQMWVLGIKLRWEIFP*QKALIS Trigger: GGAGATCAAAGCTTTCTGCAAAGGGAAGATTTCCCA...TCTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | GACTTAAAGGTAGTTGTGAGCTGCCAAATGTGGGTGCTAGGAATCAAACTCAGAATCTGCTCTCGGAGTTaGAATTTCTGGATCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DLKVVVSCQMWVLGIKLRICSRS*NFWIFP Trigger: AGGAAAGATCCAGAAATTCAAACTCCGAGAGCAGAT...TCTGAGTTTGATTCCTAGCACCCACATTTGGCAGCTCACAACTACCTTTAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS-3UTR CAA 90 bp | GAAAACAAGCAAAACAGAACCCTCATTTCTGGACTGATCTGTGGCCACAATTTGTTCATGTTCATCTTGTaGATGATGGCTCGAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ENKQNRTLISGLICGHNLFMFIL*MMARIN Trigger: ATTGATTCGAGCCATCATCAACAAGATGAACATGAA...CAAATTGTGGCCACAGATCAGTCCAGAAATGAGGGTTCTGTTTTGCTTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS GCA 72 bp | CCTCCGCCGTGGTGGTCTCTCCGCTCTTCAGCCGAATaGAAGCACAGATTTCCTCCCCCATCCGCTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPPWWSLRSSAE*KHRFPPPSARP Trigger: AGGACGAGCGGATGGGGGAGGAAATCTGTGCTTGCATTCGGCTGAAGAGCGGAGAGACCACCACGGCGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS GCA 72 bp | CCCACATGCCCAGCCGGTCACCCTTGCGGAGGCCAATaGTCAGAAGACCAGAAGCAGCTTTGTCCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PTCPAGHPCGGQ*SEDQKQLCPPP Trigger: AGGAGGTGGACAAAGCTGCTTCTGGTCTTCTGAGCATTGGCCTCCGCAAGGGTGACCGGCTGGGCATGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS TCA 72 bp | ATCCAGGAGCAGGGTCCCCGGCAGAGGGGCATCCACTaGGATGACTGTAGTCAGGTCTGGGAGTCTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: IQEQGPRQRGIH*DDCSQVWESLT Trigger: AGTGAGAGACTCCCAGACCTGACTACAGTCATCTCAGTGGATGCCCCTCTGCCGGGGACCCTGCTCCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS TCA 72 bp | CGAAGGTCTTCTGTGGCTCACCCCAGTAGCCCTGCATaGCGCAGTACCCTCGGATATACAGCTCCCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRSSVAHPSSPA*RSTLGYTAPQA Trigger: TGCCTGGGGAGCTGTATATCCGAGGGTACTGCGTCATGCAGGGCTACTGGGGTGAGCCACAGAAGACCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 72 bp | GCTGGTTGTACCGCAGCTGGGCTAGGTTCTGTTCCTTaGCACCGGCTGCCACAATATCATCCAGGAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGCTAAGLGSVP*HRLPQYHPGAG Trigger: CCCTGCTCCTGGATGATATTGTGGCAGCCGGTGGCAAGGAACAGAACCTAGCCCAGCTGCGGTACAACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 72 bp | CCACTTGTCTTGTCCGACCGTCTCGAAGGTCTTCTGTaGCTCACCCCAGTAGCCCTGCATGACGCAGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: PLVLSDRLEGLL*LTPVALHDAVP Trigger: GGGTACTGCGTCATGCAGGGCTACTGGGGTGAGCCACAGAAGACCTTCGAGACGGTCGGACAAGACAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CAA 90 bp | ATGACGCAGTACCCTCGGATATACAGCTCCCCAGGCACGTTCAGGTaGGTCAGCTCACCCGTCTCCACATTCACAATCTGGGCCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: MTQYPRIYSSPGTFR*VSSPVSTFTIWASV Trigger: CACGGAGGCCCAGATTGTGAATGTGGAGACGGGTGAGCTGACCAACCTGAACGTGCCTGGGGAGCTGTATATCCGAGGGTACTGCGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS TCA 72 bp | TGGGCAAGGGGTTGGTGCAGTTCACCATTCCAGAACTaGGAGCGCGGACACTCTGCAACTTCGAGTTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WARGWCSSPFQN*ERGHSATSSSA Trigger: GGCCGAACTCGAAGTTGCAGAGTGTCCGCGCTCTCAGTTCTGGAATGGTGAACTGCACCAACCCCTTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS GCA 72 bp | GTACAGGGGACTGGGCAGGACCAAGCGCAACTCCTCTaGAGTCTTTGTGGGCATCTTCAGACGCTGGCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VQGTGQDQAQLL*SLCGHLQTLAY Trigger: ATAGGCCAGCGTCTGAAGATGCCCACAAAGACTGCAGAGGAGTTGCGCTTGGTCCTGCCCAGTCCCCTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 72 bp | AGTCAGGTCTGGGAGTCTCTCACTCTTCAAGGCCCCTaGCTGAGCCTTTTCCAGCTCAGGACAGACCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SQVWESLTLQGP*LSLFQLRTDLL Trigger: AAGCAGGTCTGTCCTGAGCTGGAAAAGGCTCAGCCAGGGGCCTTGAAGAGTGAGAGACTCCCAGACCTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 72 bp | TGGGCAGGACCAAGCGCAACTCCTCTGCAGTCTTTGTaGGCATCTTCAGACGCTGGCCTATCAGCATGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WAGPSATPLQSL*ASSDAGLSAWS Trigger: ACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCACAAAGACTGCAGAGGAGTTGCGCTTGGTCCTGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | GGTACAGGGGACTGGGCAGGACCAAGCGCAACTCCTCTGCAGTCTTaGTGGGCATCTTCAGACGCTGGCCTATCAGCATGGAGTTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GTGDWAGPSATPLQS*WASSDAGLSAWSCL Trigger: TAAACAACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCACAAAGACTGCAGAGGAGTTGCGCTTGGTCCTGCCCAGTCCCCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 72 bp | TCACCCGTCTCCACATTCACAATCTGGGCCTCCGTGTaGGGCATAATTCTGCCCACACTACCAGCCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPVSTFTIWASV*GIILPTLPAFC Trigger: GCAGAAGGCTGGTAGTGTGGGCAGAATTATGCCTCACACGGAGGCCCAGATTGTGAATGTGGAGACGGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 72 bp | CCAGCTCTGCAGGGTAGATGTTCTCACCGCCACGGATaGTCATATCCTTCGATCGGCCGACGATCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PALQGRCSHRHG*SYPSIGRRSCR Trigger: TCTGCAAGATCGTCGGCCGATCGAAGGATATGATCATCCGTGGCGGTGAGAACATCTACCCTGCAGAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 72 bp | CACCTGTGGGTGCTTGAGGAAGAAGTCCTCCAGCTCTaGAGGGTAGATGTTCTCACCGCCACGGATGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: HLWVLEEEVLQL*RVDVLTATDDH Trigger: ATGATCATCCGTGGCGGTGAGAACATCTACCCTGCAGAGCTGGAGGACTTCTTCCTCAAGCACCCACAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | GTGGGCATCTTCAGACGCTGGCCTATCAGCATGGAGTaGTTTACGATGTTGTGGTGGGAAAGAGTGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VGIFRRWPISME*FTMLWWERVAP Trigger: GGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | TACCCTCGGATATACAGCTCCCCAGGCACGTTCAGGTaGGTCAGCTCACCCGTCTCCACATTCACAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YPRIYSSPGTFR*VSSPVSTFTIW Trigger: CCAGATTGTGAATGTGGAGACGGGTGAGCTGACCAACCTGAACGTGCCTGGGGAGCTGTATATCCGAGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS GCA 72 bp | CATCTTGTTGATGATGGCTCGAATCAATTCCGGGGGTaGTGGGGACCCAGCAATCACACCTCCACGAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLVDDGSNQFRG*WGPSNHTSTNA Trigger: AGCATTCGTGGAGGTGTGATTGCTGGGTCCCCAGCACCCCCGGAATTGATTCGAGCCATCATCAACAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 72 bp | CGCTGGCCTATCAGCATGGAGTTGTTTACGATGTTGTaGTGGGAAAGAGTGGCCCCCTTGGGGTTTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RWPISMELFTML*WERVAPLGFPV Trigger: AACTGGAAACCCCAAGGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 72 bp | CTTGTTGATGATGGCTCGAATCAATTCCGGGGGTGCTaGGGACCCAGCAATCACACCTCCACGAATGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVDDGSNQFRGC*GPSNHTSTNAC Trigger: ACAAGCATTCGTGGAGGTGTGATTGCTGGGTCCCCAGCACCCCCGGAATTGATTCGAGCCATCATCAACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | AGACGCTGGCCTATCAGCATGGAGTTGTTTACGATGTaGTGGTGGGAAAGAGTGGCCCCCTTGGGGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRWPISMELFTM*WWERVAPLGFP Trigger: TGGAAACCCCAAGGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | GCAGTCTTTGTGGGCATCTTCAGACGCTGGCCTATCAGCATGGAGTaGTTTACGATGTTGTGGTGGGAAAGAGTGGCCCCCTTGGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AVFVGIFRRWPISME*FTMLWWERVAPLGF Trigger: AAACCCCAAGGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCACAAAGACTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | TACAGGAGGGTGCCTTTCTCTCTGCTGATGGCTTCCAATGCCTTCTaGCCATTGAAGCTTGGAGAAGACAGGAGGAGAGTGGCACCATGC | + |
|
Preference number: 6 (lower is better) Translates to: YRRVPFSLLMASNAF*PLKLGEDRRRVAPC Trigger: GCATGGTGCCACTCTCCTCCTGTCTTCTCCAAGCTTCAATGGCAAGAAGGCATTGGAAGCCATCAGCAGAGAGAAAGGCACCCTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | CTGTTCATCCATCAAAGCAATGTCTCCTGTCCGATACCACTTGTCTaGTCCGACCGTCTCGAAGGTCTTCTGTGGCTCACCCCAGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFIHQSNVSCPIPLV*SDRLEGLLWLTPVA Trigger: GGCTACTGGGGTGAGCCACAGAAGACCTTCGAGACGGTCGGACAAGACAAGTGGTATCGGACAGGAGACATTGCTTTGATGGATGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | AAGCCCTGTTCATCCATCAAAGCAATGTCTCCTGTCCGATACCACTaGTCTTGTCCGACCGTCTCGAAGGTCTTCTGTGGCTCACCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KPCSSIKAMSPVRYH*SCPTVSKVFCGSPQ Trigger: CTGGGGTGAGCCACAGAAGACCTTCGAGACGGTCGGACAAGACAAGTGGTATCGGACAGGAGACATTGCTTTGATGGATGAACAGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 72 bp | CAGCCTTCTGCTCCAGGGTGTCCTCGGGAAAGTTCATaGAGGTCACGGGACTGTTCTCTGTGGTTCCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPSAPGCPRESS*RSRDCSLWFHK Trigger: TTTATGGAACCACAGAGAACAGTCCCGTGACCTTCATGAACTTTCCCGAGGACACCCTGGAGCAGAAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 72 bp | TGGCCTATCAGCATGGAGTTGTTTACGATGTTGTGGTaGGAAAGAGTGGCCCCCTTGGGGTTTCCAGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WPISMELFTMLW*ERVAPLGFPVV Trigger: GACAACTGGAAACCCCAAGGGGGCCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | CATCAAAGCAATGTCTCCTGTCCGATACCACTTGTCTaGTCCGACCGTCTCGAAGGTCTTCTGTGGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: HQSNVSCPIPLV*SDRLEGLLWLT Trigger: GGTGAGCCACAGAAGACCTTCGAGACGGTCGGACAAGACAAGTGGTATCGGACAGGAGACATTGCTTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | TTCTCACCGCCACGGATGATCATATCCTTCGATCGGCCGACGATCTaGCAGAAGCCCTGTTCATCCATCAAAGCAATGTCTCCTGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: FSPPRMIISFDRPTI*QKPCSSIKAMSPVR Trigger: TCGGACAGGAGACATTGCTTTGATGGATGAACAGGGCTTCTGCAAGATCGTCGGCCGATCGAAGGATATGATCATCCGTGGCGGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | AGGGTGCCTTTCTCTCTGCTGATGGCTTCCAATGCCTTCTTGCCATaGAAGCTTGGAGAAGACAGGAGGAGAGTGGCACCATGCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: RVPFSLLMASNAFLP*KLGEDRRRVAPCII Trigger: TATGATGCATGGTGCCACTCTCCTCCTGTCTTCTCCAAGCTTCAATGGCAAGAAGGCATTGGAAGCCATCAGCAGAGAGAAAGGCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CAA 90 bp | TATCGGGGAATCTTAAAGTGGGAAATCTTCCCTTTGCAGAAAGCTTaGATCTCCTCCGCCGTGGTGGTCTCTCCGCTCTTCAGCCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: YRGILKWEIFPLQKA*ISSAVVVSPLFSRM Trigger: CATTCGGCTGAAGAGCGGAGAGACCACCACGGCGGAGGAGATCAAAGCTTTCTGCAAAGGGAAGATTTCCCACTTTAAGATTCCCCGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 72 bp | TCCTTGAGCTGCGCAAAGTTCAGCCTGATGTTTTCATaGAGGATAACCAAAGCCTCTCTGTCGGGGAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSCAKFSLMFS*RITKASLSGNL Trigger: GAGGTTCCCCGACAGAGAGGCTTTGGTTATCCTCCATGAAAACATCAGGCTGAACTTTGCGCAGCTCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 72 bp | TCTTTGTGGGCATCTTCAGACGCTGGCCTATCAGCATaGAGTTGTTTACGATGTTGTGGTGGGAAAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLWASSDAGLSA*SCLRCCGGKEW Trigger: CCACTCTTTCCCACCACAACATCGTAAACAACTCCATGCTGATAGGCCAGCGTCTGAAGATGCCCACAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CCA 72 bp | AGAAGTCTGGCTGATTCAGAATATCCACAAACATCGTaGGTGTGCCATACAGGAGGGTGCCTTTCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLADSEYPQTS*VCHTGGCLSLC Trigger: GCAGAGAGAAAGGCACCCTCCTGTATGGCACACCCACGATGTTTGTGGATATTCTGAATCAGCCAGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CAA 72 bp | CCACGGATGATCATATCCTTCGATCGGCCGACGATCTaGCAGAAGCCCTGTTCATCCATCAAAGCAATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRMIISFDRPTI*QKPCSSIKAMS Trigger: AGACATTGCTTTGATGGATGAACAGGGCTTCTGCAAGATCGTCGGCCGATCGAAGGATATGATCATCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CAA 72 bp | ATCTTAAAGTGGGAAATCTTCCCTTTGCAGAAAGCTTaGATCTCCTCCGCCGTGGTGGTCTCTCCGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILKWEIFPLQKA*ISSAVVVSPLF Trigger: GAAGAGCGGAGAGACCACCACGGCGGAGGAGATCAAAGCTTTCTGCAAAGGGAAGATTTCCCACTTTAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
||
| CDS CAA 72 bp | ATGTATCGGGGAATCTTAAAGTGGGAAATCTTCCCTTaGCAGAAAGCTTTGATCTCCTCCGCCGTGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MYRGILKWEIFP*QKALISSAVVV Trigger: GACCACCACGGCGGAGGAGATCAAAGCTTTCTGCAAAGGGAAGATTTCCCACTTTAAGATTCCCCGATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 90 bp | AGGACAGACCTGCTTCAGGATGTCGTAGTACTGCTGGGTCTTGAATaGTTTGGGAAACACAATACCTTTGCAGCCTACCTTTCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RTDLLQDVVVLLGLE*FGKHNTFAAYLSED Trigger: GTCCTCAGAAAGGTAGGCTGCAAAGGTATTGTGTTTCCCAAACAATTCAAGACCCAGCAGTACTACGACATCCTGAAGCAGGTCTGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 72 bp | GTTTGGGAAACACAATACCTTTGCAGCCTACCTTTCTaGGGACATATTCCAGTTCTGAGGACTGGTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VWETQYLCSLPF*GHIPVLRTGRL Trigger: CAGCCTACCAGTCCTCAGAACTGGAATATGTCCTCAGAAAGGTAGGCTGCAAAGGTATTGTGTTTCCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS TCA 72 bp | AGACCTGCTTCAGGATGTCGTAGTACTGCTGGGTCTTaGATTGTTTGGGAAACACAATACCTTTGCAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: RPASGCRSTAGS*IVWETQYLCSL Trigger: TAGGCTGCAAAGGTATTGTGTTTCCCAAACAATTCAAGACCCAGCAGTACTACGACATCCTGAAGCAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | CTGCTTCAGGATGTCGTAGTACTGCTGGGTCTTGAATaGTTTGGGAAACACAATACCTTTGCAGCCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: LLQDVVVLLGLE*FGKHNTFAAYL Trigger: AAGGTAGGCTGCAAAGGTATTGTGTTTCCCAAACAATTCAAGACCCAGCAGTACTACGACATCCTGAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | CACAGTTTTAGATGCTGTTCCATCTGCTCTCGGAGTTaGAATTTCTGGATCTTTCCTGAGATGGTGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: HSFRCCSICSRS*NFWIFPEMVRG Trigger: TCCTCTCACCATCTCAGGAAAGATCCAGAAATTCAAACTCCGAGAGCAGATGGAACAGCATCTAAAACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CCA 72 bp | TCCACGAATGCTTGTGAAATCATAACTGGAGAAGTCTaGCTGATTCAGAATATCCACAAACATCGTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: STNACEIITGEV*LIQNIHKHRGC Trigger: ACACCCACGATGTTTGTGGATATTCTGAATCAGCCAGACTTCTCCAGTTATGATTTCACAAGCATTCGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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| CDS CAA 72 bp | TGCTGGGTCTTGAATTGTTTGGGAAACACAATACCTTaGCAGCCTACCTTTCTGAGGACATATTCCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: CWVLNCLGNTIP*QPTFLRTYSSS Trigger: AGAACTGGAATATGTCCTCAGAAAGGTAGGCTGCAAAGGTATTGTGTTTCCCAAACAATTCAAGACCCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103164.4 |
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