Pregenerated sensors for ACR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022622Ensembl transcript IDs: ENSMUST00000023295.3, ENSMUST00000230538.2, ENSMUST00000230978.2, ENSMUST00000231216.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTTCAGGAGGCTGCCTCCACAGGCGTGGTACCTGCGGCTGTTATaGGACGTGAAGATCTGTAAGCTGACCATCCAGGGCCAGGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: EFRRLPPQAWYLRLL*DVKICKLTIQGQAP Trigger: TGGGGCCTGGCCCTGGATGGTCAGCTTACAGATCTTCACGTCCCATAACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR GCA 90 bp | TGCGCACTCTGCCCACTGACAATCCGGGTACCTGCTTGTGAGTTCTaGCTGAATCGTAACCCACAGGGACCACTGAGGAGAGACCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: CALCPLTIRVPACEF*LNRNPQGPLRRDQE Trigger: TTCCTGGTCTCTCCTCAGTGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCAGAGTGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR TCA 90 bp | GCGCAATGTCATTTCCCTCCGTCACTACGTTGTATTTCTCATGGATaGCAATCTTCTGCACATATCTCTCCTGCTGGGGCTCTTTCACTG | + |
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Preference number: 1 (lower is better) Translates to: AQCHFPPSLRCISHG*QSSAHISPAGALSL Trigger: CAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR GCA 90 bp | TTTCCCTCCGTCACTACGTTGTATTTCTCATGGATGACAATCTTCTaGACATATCTCTCCTGCTGGGGCTCTTTCACTGGCTTGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: FPSVTTLYFSWMTIF*TYLSCWGSFTGLFL Trigger: AAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CCA 90 bp | GATGACAATCTTCTGCACATATCTCTCCTGCTGGGGCTCTTTCACTaGCTTGTTTCTTCCATATTCGATTTCTTGTGCTCCGAAAACCAG | + |
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Preference number: 1 (lower is better) Translates to: DDNLLHISLLLGLFH*LVSSIFDFLCSENQ Trigger: CTGGTTTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR GCA 90 bp | ACGTTGTATTTCTCATGGATGACAATCTTCTGCACATATCTCTCCTaGTGGGGCTCTTTCACTGGCTTGTTTCTTCCATATTCGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: TLYFSWMTIFCTYLS*WGSFTGLFLPYSIS Trigger: AGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR TCA 90 bp | GAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTTGAGTTaGAGAAAACAGAAGTTCATGTCCTCGAGTGTACATATATATTTA | + |
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Preference number: 1 (lower is better) Translates to: EQGGCKFDGGRFGLS*RKQKFMSSSVHIYL Trigger: TAAATATATATGTACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTTCTCATCTTCAGGGCCTCTATGAGGCGCTGGAGACGCCGAGCAAAAGAGGCCAGGCCCCAAGCTaGGCACTCTGCCCACTGACA | + |
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Preference number: 2 (lower is better) Translates to: VSSHLQGLYEALETPSKRGQAPS*ALCPLT Trigger: TGTCAGTGGGCAGAGTGCGCAGCTTGGGGCCTGGCC...TCTTTTGCTCGGCGTCTCCAGCGCCTCATAGAGGCCCTGAAGATGAGAACTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR GCA 90 bp | GACCATCGGATGGCGGGTAGTCGGCGGATGAGGGGTGGCTGGCTGAATCAAGTGGCCTTCAGGATACCCTaGACACACATTAGTCGATGT | + |
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Preference number: 2 (lower is better) Translates to: DHRMAGSRRMRGGWLNQVAFRIP*THISRC Trigger: ACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGC...CACTTGATTCAGCCAGCCACCCCTCATCCGCCGACTACCCGCCATCCGATGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCAATCTTGCCTTCAGGATACCCTGCACACACATTAGTCGATGTGACACGCTGCCTCCACAGGCGTaGTACCTGCGGCTGTTATGG | + |
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Preference number: 2 (lower is better) Translates to: GVNLAFRIPCTHISRCDTLPPQA*YLRLLW Trigger: CCATAACAGCCGCAGGTACCACGCCTGTGGAGGCAG...CGTGTCACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGCAAGATTGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCAATCTTGCCTTCAGGATACCCTGCACACACATTAGTCGATGTGACACGCCAAGCTGCGCACTCTaGCCACTGACAATCCGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GVNLAFRIPCTHISRCDTPSCAL*PLTIRV Trigger: TACCCGGATTGTCAGTGGGCAGAGTGCGCAGCTTGG...CGTGTCACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGCAAGATTGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAAGCGGTCGAGAAGGCAGGTGTTGGAAATACCAAGGAGGGCGAAGAGAAGGGGACAGGTGATGGCCTaGGGGCCTTCTCTTTTATGT | + |
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Preference number: 2 (lower is better) Translates to: VKRSRRQVLEIPRRAKRRGQVMA*GPSLLC Trigger: ACATAAAAGAGAAGGCCCCCAGGCCATCACCTGTCC...CCTTCTCTTCGCCCTCCTTGGTATTTCCAACACCTGCCTTCTCGACCGCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCAAGAGCGCAATGTCATTTCCCTCCGTCACTACGTTGTATTTCTCATGGACTTGTGAGTTCTGCCTaGATCGTAACCCACAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSRAQCHFPPSLRCISHGLVSSA*IVTHRD Trigger: GTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAG...TCCATGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGCTCTTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAGTTCTCATCTTCAGGGCCTCTATGAGGCGCTGGAGACGCCGAGCAAAAGAATATTCGATTTCTTGTaGTCCGAAAACCAGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: VSSHLQGLYEALETPSKRIFDFL*SENQSP Trigger: TGGAGACTGGTTTTCGGAGCACAAGAAATCGAATAT...TCTTTTGCTCGGCGTCTCCAGCGCCTCATAGAGGCCCTGAAGATGAGAACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CAA 90 bp | ACAATCTTCTGCACATATCTCTCCTGCTGGGGCTCTTTCACTGGCTaGTTTCTTCCATATTCGATTTCTTGTGCTCCGAAAACCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TIFCTYLSCWGSFTG*FLPYSISCAPKTSL Trigger: GAGACTGGTTTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CAA 90 bp | GGAGTGATCTTCAAGAGCGCAATGTCATTTCCCTCCGTCACTACGTaGTATTTCTCATGGATGACAATCTTCTGCACATATCTCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GVIFKSAMSFPSVTT*YFSWMTIFCTYLSC Trigger: GCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGCTCTTGAAGATCACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR TCA 72 bp | CGACCACAAAGGGGCTGTCGACGTTGTCTCTGCACATaGGAGGCCCACCACTGTCCCCCTGGCAGGTGTCAA | + |
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Preference number: 3 (lower is better) Translates to: RPQRGCRRCLCT*EAHHCPPGRCQ Trigger: TTGACACCTGCCAGGGGGACAGTGGTGGGCCTCTCATGTGCAGAGACAACGTCGACAGCCCCTTTGTGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CCA 72 bp | AGGCTGCCTCCACAGGCGTGGTACCTGCGGCTGTTATaGGACGTGAAGATCTGTAAGCTGACCATCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RLPPQAWYLRLL*DVKICKLTIQG Trigger: GCCCTGGATGGTCAGCTTACAGATCTTCACGTCCCATAACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CCA 72 bp | ACCCAGTGGGAGTTCAGGAGGCTGCCTCCACAGGCGTaGTACCTGCGGCTGTTATGGGACGTGAAGATCTGT | + |
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Preference number: 3 (lower is better) Translates to: TQWEFRRLPPQA*YLRLLWDVKIC Trigger: ACAGATCTTCACGTCCCATAACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCATAGGGTAAGTTCTCATCTTCAGGGCCTCTATGAGGCGCTGGAGACGCCGGCAGGTGTGGGGTATTaGGGGAGGACCCGCCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: FHRVSSHLQGLYEALETPAGVGY*GRTRLK Trigger: TTTAAGGCGGGTCCTCCCCAAATACCCCACACCTGC...CGGCGTCTCCAGCGCCTCATAGAGGCCCTGAAGATGAGAACTTACCCTATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR GCA 72 bp | TGCCCACTGACAATCCGGGTACCTGCTTGTGAGTTCTaGCTGAATCGTAACCCACAGGGACCACTGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CPLTIRVPACEF*LNRNPQGPLRR Trigger: TCTCCTCAGTGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR TCA 72 bp | CATTTCCCTCCGTCACTACGTTGTATTTCTCATGGATaGCAATCTTCTGCACATATCTCTCCTGCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: HFPPSLRCISHG*QSSAHISPAGA Trigger: AGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR CCA 72 bp | CTTCTGCACATATCTCTCCTGCTGGGGCTCTTTCACTaGCTTGTTTCTTCCATATTCGATTTCTTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LLHISLLLGLFH*LVSSIFDFLCS Trigger: GGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR GCA 72 bp | TTCTCATGGATGACAATCTTCTGCACATATCTCTCCTaGTGGGGCTCTTTCACTGGCTTGTTTCTTCCATAT | + |
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Preference number: 3 (lower is better) Translates to: FSWMTIFCTYLS*WGSFTGLFLPY Trigger: ATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCAGAAGATTGTCATCCATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCGCAATGTCATTTCCCTCCGTCACTACGTTGTATTTCTCATGGATGACAATTCCATATTCGATTTCTaGTGCTCCGAAAACCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: ERNVISLRHYVVFLMDDNSIFDF*CSENQS Trigger: AGACTGGTTTTCGGAGCACAAGAAATCGAATATGGA...ATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR CCA 90 bp | CGGCGGATGAGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTCTGCCTCCACAGGCGTaGTACCTGCGGCTGCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RRMRGGWLNQVQGVRADLLPPQA*YLRLLV Trigger: CACAAGCAGCCGCAGGTACCACGCCTGTGGAGGCAG...AAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTCATCCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATTTCCATCAGGACAGGTaGTGGCCTGGGGGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RGGWLNQVQGVRADLGSNFHQDR*WPGGLL Trigger: GAGAAGGCCCCCAGGCCATCACCTGTCCTGATGGAA...ATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCGGCAACCACGGACACTaGCAAGACCAGCACAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GWLNQVQGVRADLGSNPVGNHGH*QDQHSD Trigger: GTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCC...GACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000230978.2 ENSMUST00000231216.2 |
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| CDS-3UTR CCA 90 bp | CGGCGGATGAGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTACGTGGTGTTATCCTTaGCAACCACGGACACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RRMRGGWLNQVQGVRADLTWCYP*QPRTLP Trigger: TGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGT...AAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTCATCCGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000230978.2 ENSMUST00000231216.2 |
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| CDS-3UTR GCA 90 bp | GGAAATACCAAGGAGGGCGAAGAGAAGGAGGGTGAAAAGAGACCATCGGATGGCGGCAACCACGGACACTaGCAAGACCAGCACAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: GNTKEGEEKEGEKRPSDGGNHGH*QDQHSD Trigger: GTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCC...GCCATCCGATGGTCTCTTTTCACCCTCCTTCTCTTCGCCCTCCTTGGTATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR GCA 90 bp | CGGCGGATGAGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGCCTTCAGGATACCCTaGACACACATTAGTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: RRMRGGWLNQVQGVRADLAFRIP*THISRC Trigger: ACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGC...AAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTCATCCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CCA 90 bp | ATGAGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCCCACAGGGACCAACGTaGTGTTATCCTTGGCAACCA | + |
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Preference number: 4 (lower is better) Translates to: MRGGWLNQVQGVRADLGSPQGPT*CYPWQP Trigger: TGGTTGCCAAGGATAACACCACGTTGGTCCCTGTGG...GCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| 3UTR CAA 72 bp | CCGAGCAAAAGACAGCGTTGTGCGGTGCCTCATGTGTaGTGTAGCAATGGTAAAGGATGCAGGCTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PSKRQRCAVPHV*CSNGKGCRLGW Trigger: CCAGCCCAGCCTGCATCCTTTACCATTGCTACACAACACATGAGGCACCGCACAACGCTGTCTTTTGCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR TCA 90 bp | AGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCTTGTGAGTTCTGCCTaGATCGTAACCCACAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RGGWLNQVQGVRADLGSNLVSSA*IVTHRD Trigger: GTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAG...ATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR GCA 90 bp | AGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATTGCACATATCTCTCCTaGTGGGGCTCTTTCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: RGGWLNQVQGVRADLGSNCTYLS*WGSFTG Trigger: GCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCA...ATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCGGCAGGTGTCAATCTTaGCTTCAGGATACCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GWLNQVQGVRADLGSNPVGRCQS*LQDTLH Trigger: GTGCAGGGTATCCTGAAGGCAAGATTGACACCTGCC...GACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCGGACAGGTGATGGCCTaGGGGCCTTCTCTTTTATGT | + |
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Preference number: 4 (lower is better) Translates to: GWLNQVQGVRADLGSNPVGQVMA*GPSLLC Trigger: ACATAAAAGAGAAGGCCCCCAGGCCATCACCTGTCC...GACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CCA 90 bp | GTAAGTTCTCATCTTCAGGGCCTCTATGAGGCGCTGGAGACGCCGAGCAAAAGAACGTGGTGTTATCCTTaGCAACCACGGACACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VSSHLQGLYEALETPSKRTWCYP*QPRTLP Trigger: TGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGT...TCTTTTGCTCGGCGTCTCCAGCGCCTCATAGAGGCCCTGAAGATGAGAACTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR GCA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAGGCCAGGCCCCAAGCTaGGCACTCTGCCCACTGACA | + |
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Preference number: 4 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGGQAPS*ALCPLT Trigger: TGTCAGTGGGCAGAGTGCGCAGCTTGGGGCCTGGCC...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR CCA 90 bp | TGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCCAGACATATCTCTCCTGCTaGGGCTCTTTCACTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: WLNQVQGVRADLGSNPVQTYLSC*GSFTGL Trigger: CAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGT...CTGGACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR TCA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGATTCCATCAGGACAGGTaGTGGCCTGGGGGCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGFHQDR*WPGGLL Trigger: GAGAAGGCCCCCAGGCCATCACCTGTCCTGATGGAA...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR TCA 90 bp | TGGAGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTGCGAGAGGAGGGGCATaGGTGATGAGGAGGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: WRKIWVELKKTEVHVLECARGGA*VMRRFG Trigger: CCCAAACCTCCTCATCACTCATGCCCCTCCTCTCGC...ACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR GCA 90 bp | TGGAGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTGGCAACCACGGACACTaGCAAGACCAGCACAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: WRKIWVELKKTEVHVLECGNHGH*QDQHSD Trigger: GTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCC...ACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR TCA 90 bp | ATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTCGTTGTCTCTGCACATaGGAGGCCCACCACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLELSREDVNLMEEDLGRCLCT*EAHHCP Trigger: GGGACAGTGGTGGGCCTCTCATGTGCAGAGACAACG...ACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR GCA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGACCAAGCTGCGCACTCTaGCCACTGACAATCCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGPSCAL*PLTIRV Trigger: TACCCGGATTGTCAGTGGGCAGAGTGCGCAGCTTGG...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR GCA 90 bp | GGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCATATTCGATTTCTTGTaGTCCGAAAACCAGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GWLNQVQGVRADLGSNPVIFDFL*SENQSP Trigger: TGGAGACTGGTTTTCGGAGCACAAGAAATCGAATAT...GACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTCTGCCTCCACAGGCGTaGTACCTGCGGCTGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLELSREDVNLMEEDLGLPPQA*YLRLLW Trigger: CCATAACAGCCGCAGGTACCACGCCTGTGGAGGCAG...ACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTGCTGTGAGCACCCAGTaGGAGTTCAGGAGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLELSREDVNLMEEDLGAVSTQ*EFRRLP Trigger: AGGCAGCCTCCTGAACTCCCACTGGGTGCTCACAGC...ACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR GCA 90 bp | TGGAGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTAGCAATGGTAAAGGATaGAGGCTGGGCTGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRKIWVELKKTEVHVLECSNGKG*RLGWGW Trigger: CCAACCCCAGCCCAGCCTGCATCCTTTACCATTGCT...ACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | AGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATACGTTGTATTTCTCATaGATGACAATCTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGGWLNQVQGVRADLGSNTLYFS*MTIFCT Trigger: TGTGCAGAAGATTGTCATCCATGAGAAATACAACGT...ATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTACATCGGCGGATGAGGGGTaGCTGGCTGAATCAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKIWVELKKTEVHVLECTSADEG*LAESSA Trigger: TGCACTTGATTCAGCCAGCCACCCCTCATCCGCCGA...TGTACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTTGACGTGGTGTTATCCTTaGCAACCACGGACACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIGAEQGGCKFDGGRFGLTWCYP*QPRTLP Trigger: TGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGT...CAACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTGTAGTGGTAGTTCCTTaGTCCACTGTACTGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRKIWVELKKTEVHVLECVVVVP*STVLGG Trigger: CCCTCCCAGTACAGTGGACCAAGGAACTACCACTAC...ACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR TCA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGCTTGTGAGTTCTGCCTaGATCGTAACCCACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SILLELSREDVNLMEEDLLVSSA*IVTHRD Trigger: GTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAG...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR TCA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGCGAAGAGAAGGAGGGTaGAAAGAGACCATCGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SILLELSREDVNLMEEDLRREGG*KETIGW Trigger: CCATCCGATGGTCTCTTTTCACCCTCCTTCTCTTCG...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTTGCACATATCTCTCCTaGTGGGGCTCTTTCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLELSREDVNLMEEDLGCTYLS*WGSFTG Trigger: GCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCA...ACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR GCA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGCAGGTGTCAATCTTaGCTTCAGGATACCCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SILLELSREDVNLMEEDLGRCQS*LQDTLH Trigger: GTGCAGGGTATCCTGAAGGCAAGATTGACACCTGCC...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGACAAAAGACAGCGTTGTaGGGTGCCTCATGTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGQKTAL*GASCVV Trigger: CACAACACATGAGGCACCGCACAACGCTGTCTTTTG...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTACAGGACAGGTGATGGCCTaGGGGCCTTCTCTTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: RKIWVELKKTEVHVLECTGQVMA*GPSLLC Trigger: ACATAAAAGAGAAGGCCCCCAGGCCATCACCTGTCC...TGTACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGACTTGGTCCACTGTACTaGGAGGGATGTTTCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGLGPLY*EGCFIG Trigger: CCCTATGAAACATCCCTCCCAGTACAGTGGACCAAG...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| 3UTR CAA 72 bp | TGCACATATCTCTCCTGCTGGGGCTCTTTCACTGGCTaGTTTCTTCCATATTCGATTTCTTGTGCTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTYLSCWGSFTG*FLPYSISCAPK Trigger: TTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTGCCTTCAGGATACCCTaGACACACATTAGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: WRKIWVELKKTEVHVLECAFRIP*THISRC Trigger: ACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGC...ACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGACATATCTCTCCTGCTaGGGCTCTTTCACTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SILLELSREDVNLMEEDLTYLSC*GSFTGL Trigger: CAAGCCAGTGAAAGAGCCCCAGCAGGAGAGATATGT...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| 3UTR CAA 72 bp | CTCTTTCACTGGCTTGTTTCTTCCATATTCGATTTCTaGTGCTCCGAAAACCAGTCTCCAGTCATAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFHWLVSSIFDF*CSENQSPVIDF Trigger: AAAGTCTATGACTGGAGACTGGTTTTCGGAGCACAAGAAATCGAATATGGAAGAAACAAGCCAGTGAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
||
| 3UTR CAA 72 bp | TTCAAGAGCGCAATGTCATTTCCCTCCGTCACTACGTaGTATTTCTCATGGATGACAATCTTCTGCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSAMSFPSVTT*YFSWMTIFCTY Trigger: ATATGTGCAGAAGATTGTCATCCATGAGAAATACAACGTAGTGACGGAGGGAAATGACATTGCGCTCTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTTGATATTCGATTTCTTGTaGTCCGAAAACCAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIGAEQGGCKFDGGRFGLIFDFL*SENQSP Trigger: TGGAGACTGGTTTTCGGAGCACAAGAAATCGAATAT...CAACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CCA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGACGTTGTATTTCTCATaGATGACAATCTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SILLELSREDVNLMEEDLTLYFS*MTIFCT Trigger: TGTGCAGAAGATTGTCATCCATGAGAAATACAACGT...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS GCA 90 bp | TGCGCACTCTGCCCACTGACAATCCGGGTACCTGCTTGTGAGTTCTaGCTGAATCGTAACCCACAGGGACCATCACACGTGGTGTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CALCPLTIRVPACEF*LNRNPQGPSHVVLS Trigger: GGATAACACCACGTGTGATGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCAGAGTGCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS CCA 90 bp | GCCATCCAGTCTTTGTACCTCCACACTCACACGTGGTGTTATCCTTaGCAACCACGGACACTGCCAAGACCAGCACAGCGACAGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AIQSLYLHTHTWCYP*QPRTLPRPAQRQLA Trigger: TGCCAACTGTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGACTGGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR CAA 90 bp | GTACCTGCTTGTGAGTTCTGCCTGAATCGTAACCCACAGGGACCACTGAGGAGACACGTGGTGTTATCCTaGGCAACCACGGACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPACEFCLNRNPQGPLRRHVVLS*ATTDTA Trigger: GGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTG...TCTCCTCAGTGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCCAGGCAGGTGTGGGGTATTaGGGGAGGACCCGCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WLNQVQGVRADLGSNPVQAGVGY*GRTRLK Trigger: TTTAAGGCGGGTCCTCCCCAAATACCCCACACCTGC...CTGGACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCCAGAACGTGGTGTTATCCTaGGCAACCACGGACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WLNQVQGVRADLGSNPVQNVVLS*ATTDTA Trigger: GGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTT...CTGGACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CAA 90 bp | TGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCAATCCAGTCCAGGATGTGACACGCCCATaGTACCACTGGGTTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: WLNQVQGVRADLGSNPVQDVTRP*YHWVEL Trigger: TAACTCAACCCAGTGGTACAATGGGCGTGTCACATC...CTGGACTGGATTGCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS CCA 90 bp | AAATCAAGAAGAGCCATCCAGTCTTTGTACCTCCACACTCACACGTaGTGTTATCCTTGGCAACCACGGACACTGCCAAGACCAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KSRRAIQSLYLHTHT*CYPWQPRTLPRPAQ Trigger: CTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGACTGGATGGCTCTTCTTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGGGTGGCTGGCTGAATCAAGTGCAAGGCGTTAGGGCCGATCTTGGAAGCTCCATATTCGATTTCTaGTGCTCCGAAAACCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MRGGWLNQVQGVRADLGSSIFDF*CSENQS Trigger: AGACTGGTTTTCGGAGCACAAGAAATCGAATATGGA...GCTTCCAAGATCGGCCCTAACGCCTTGCACTTGATTCAGCCAGCCACCCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCAATCTTGCCTTCAGGATACCCTGCACACACATTAGTCGATGTGACACGAGAGCCATCCAGTCTTaGTACCTCCACACTCACACG | + |
|
Preference number: 5 (lower is better) Translates to: GVNLAFRIPCTHISRCDTRAIQS*YLHTHT Trigger: CGTGTGAGTGTGGAGGTACAAAGACTGGATGGCTCT...CGTGTCACATCGACTAATGTGTGTGCAGGGTATCCTGAAGGCAAGATTGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS-3UTR CAA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGCACGTGGTGTTATCCTaGGCAACCACGGACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SILLELSREDVNLMEEDLHVVLS*ATTDTA Trigger: GGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTG...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR CAA 90 bp | ATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGGTGCAGGTGTGGGGTATTaGGGGAGGACCCGCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILLELSREDVNLMEEDLGAGVGY*GRTRLK Trigger: TTTAAGGCGGGTCCTCCCCAAATACCCCACACCTGC...ACCCAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR CAA 90 bp | TCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGAAGATTTGGATGTGACACGCCCATaGTACCACTGGGTTGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SILLELSREDVNLMEEDLDVTRP*YHWVEL Trigger: TAACTCAACCCAGTGGTACAATGGGCGTGTCACATC...CAAATCTTCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGATTTGGGTTGAGTTGAAGAAAACAGAAGTTCATGTCCTCGAGTGTACACCCTCCGTCACTACGTaGTATTTCTCATGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: RKIWVELKKTEVHVLECTPSVTT*YFSWMT Trigger: TGTCATCCATGAGAAATACAACGTAGTGACGGAGGG...TGTACACTCGAGGACATGAACTTCTGTTTTCTTCAACTCAACCCAAATCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
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| CDS-3UTR CAA 90 bp | GAGCAATTCCATTTTATTGGAGCTGAGCAGGGAGGATGTAAATTTGATGGAGGATCCATATTCGATTTCTaGTGCTCCGAAAACCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EQFHFIGAEQGGCKFDGGSIFDF*CSENQS Trigger: AGACTGGTTTTCGGAGCACAAGAAATCGAATATGGA...TCCTCCATCAAATTTACATCCTCCCTGCTCAGCTCCAATAAAATGGAATTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS CCA 72 bp | ACCCAGTGGGAGTTCAGGAGGCTGCCTCCACAGGCGTaGTACCTGCGGTCACACGTGGTGTTATCCTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TQWEFRRLPPQA*YLRSHVVLSLA Trigger: TGCCAAGGATAACACCACGTGTGACCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230538.2 |
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| CDS CAA 72 bp | CAGGCGTGGTACCTGCGGTCACACGTGGTGTTATCCTaGGCAACCACGGACACTGCCAAGACCAGCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: QAWYLRSHVVLS*ATTDTAKTSTA Trigger: CGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGACCGCAGGTACCACGCCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230538.2 |
||
| CDS CCA 72 bp | AGGCGTGGTACCTGCGGTCACACGTGGTGTTATCCTTaGCAACCACGGACACTGCCAAGACCAGCACAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRGTCGHTWCYP*QPRTLPRPAQR Trigger: TCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGACCGCAGGTACCACGCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230538.2 |
||
| CDS GCA 72 bp | TCCACAGGCGTGGTACCTGCGGCTGCTTGTGAGTTCTaGCTGAATCGTAACCCACAGGGACCAACGTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: STGVVPAAACEF*LNRNPQGPTWC Trigger: ACACCACGTTGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGCCGCAGGTACCACGCCTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
||
| CDS CAA 72 bp | CGTAACCCACAGGGACCATCACACGTGGTGTTATCCTaGGCAACCACGGACACTGCCAAGACCAGCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RNPQGPSHVVLS*ATTDTAKTSTA Trigger: CGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGATGGTCCCTGTGGGTTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS TCA 72 bp | CAGGCGTGGTACCTGCGGCTGCTTGTGAGTTCTGCCTaGATCGTAACCCACAGGGACCAACGTGGTGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: QAWYLRLLVSSA*IVTHRDQRGVI Trigger: GATAACACCACGTTGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGCCGCAGGTACCACGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
||
| CDS GCA 72 bp | CTCACACGTGGTGTTATCCTTGGCAACCACGGACACTaGCAAGACCAGCACAGCGACAGTTGGCAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTRGVILGNHGH*QDQHSDSWQHL Trigger: GAGATGCTGCCAACTGTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
||
| CDS CAA 90 bp | AGCCATCCAGTCTTTGTACCTCCACACTCACACGTGGTGTTATCCTaGGCAACCACGGACACTGCCAAGACCAGCACAGCGACAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHPVFVPPHSHVVLS*ATTDTAKTSTATVG Trigger: GCCAACTGTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGACTGGATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
||
| CDS GCA 72 bp | ATCACACGTGGTGTTATCCTTGGCAACCACGGACACTaGCAAGACCAGCACAGCGACAGTTGGCAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: ITRGVILGNHGH*QDQHSDSWQHL Trigger: GAGATGCTGCCAACTGTCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS GCA 72 bp | TGCCCACTGACAATCCGGGTACCTGCTTGTGAGTTCTaGCTGAATCGTAACCCACAGGGACCATCACACGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPLTIRVPACEF*LNRNPQGPSHV Trigger: CACGTGTGATGGTCCCTGTGGGTTACGATTCAGGCAGAACTCACAAGCAGGTACCCGGATTGTCAGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023295.3 |
||
| CDS CCA 72 bp | AATCGTAACCCACAGGGACCAACGTGGTGTTATCCTTaGCAACCACGGACACTGCCAAGACCAGCACAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: NRNPQGPTWCYP*QPRTLPRPAQR Trigger: TCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTTGGTCCCTGTGGGTTACGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230978.2 |
||
| CDS CAA 72 bp | GTCTTTGTACCTCCACACTCACACGTGGTGTTATCCTaGGCAACCACGGACACTGCCAAGACCAGCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: VFVPPHSHVVLS*ATTDTAKTSTA Trigger: CGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS CCA 72 bp | TCTTTGTACCTCCACACTCACACGTGGTGTTATCCTTaGCAACCACGGACACTGCCAAGACCAGCACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: SLYLHTHTWCYP*QPRTLPRPAQR Trigger: TCGCTGTGCTGGTCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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| CDS CCA 72 bp | AGAGCCATCCAGTCTTTGTACCTCCACACTCACACGTaGTGTTATCCTTGGCAACCACGGACACTGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RAIQSLYLHTHT*CYPWQPRTLPR Trigger: TCTTGGCAGTGTCCGTGGTTGCCAAGGATAACACCACGTGTGAGTGTGGAGGTACAAAGACTGGATGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231216.2 |
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