Pregenerated sensors for ACPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032561Ensembl transcript IDs: ENSMUST00000062723.14, ENSMUST00000112590.3, ENSMUST00000215852.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCCTGTAACCCCAGTGCTGTGGAGACAAGCCAGGAGGATCACTaGGGCTTGCTGGATGTCAGAGTAGCTTTGGGTTCAGTGAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: CPCNPSAVETSQEDH*GLLDVRVALGSVRD Trigger: ATCTCTCACTGAACCCAAAGCTACTCTGACATCCAGCAAGCCCCAGTGATCCTCCTGGCTTGTCTCCACAGCACTGGGGTTACAGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR TCA 90 bp | AGGCACTGGAGGCTTGGGAGACCCTCTGCAGAGCACTCTGACCTCTaGGGTGCTGTGTCTGATATCTTGCTCTTGTCAGGTTGTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: RHWRLGRPSAEHSDL*GAVSDILLLSGCLL Trigger: CAATAAACAACCTGACAAGAGCAAGATATCAGACACAGCACCTCAGAGGTCAGAGTGCTCTGCAGAGGGTCTCCCAAGCCTCCAGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR CCA 90 bp | TCATCGGGGCACAGCTCCGTGTGCAGTGGCTGTAGACCTGGTACTTaGCTTACGGCTTCTGAAGGTTCCAGAATCAAAGCCTTGAACATT | + |
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Preference number: 1 (lower is better) Translates to: SSGHSSVCSGCRPGT*LTASEGSRIKALNI Trigger: AATGTTCAAGGCTTTGATTCTGGAACCTTCAGAAGCCGTAAGCCAAGTACCAGGTCTACAGCCACTGCACACGGAGCTGTGCCCCGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR TCA 90 bp | TCTGAGGTGCTGTGTCTGATATCTTGCTCTTGTCAGGTTGTTTATTaGCTACAACGCGCCTTGGAGGAGCTGCTGTATGGAAGCCATGTA | + |
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Preference number: 1 (lower is better) Translates to: SEVLCLISCSCQVVY*LQRALEELLYGSHV Trigger: TACATGGCTTCCATACAGCAGCTCCTCCAAGGCGCGTTGTAGTCAATAAACAACCTGACAAGAGCAAGATATCAGACACAGCACCTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR GCA 90 bp | CAGGGAAGAGAATATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATaGCAGTCGGAGCCTCATGTACGCCATTCCTTAAGCAGTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: QGREYQLLCKKLPSE*QSEPHVRHSLSSGI Trigger: AATCCCACTGCTTAAGGAATGGCGTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGATATTCTCTTCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CCA 90 bp | CTTTCTCTCCCTTTCGTCTTCATAGTCACAAGGTGGGTTGGAATTTaGCTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCC | + |
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Preference number: 1 (lower is better) Translates to: LSLPFVFIVTRWVGI*LLLSGPLCKRAEAS Trigger: GGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAGCCAAATTCCAACCCACCTTGTGACTATGAAGACGAAAGGGAGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR TCA 90 bp | AACAGAGGTGATCGCAGCTCTAGTGACGCTCTTGCAACATCACCATaGCAACTGGAATGGTCACATCTGTCTCATCTACCAAGTAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: NRGDRSSSDALATSP*QLEWSHLSHLPSSY Trigger: ATAACTACTTGGTAGATGAGACAGATGTGACCATTCCAGTTGTCATGGTGATGTTGCAAGAGCGTCACTAGAGCTGCGATCACCTCTGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR GCA 90 bp | ACGTTGCTTATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTaGATGATTCCTATAGCTCATCTGTCACTTGGGATTCTGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: TLLIFWDTPQFLCVL*MIPIAHLSLGILPQ Trigger: CTGTGGCAGAATCCCAAGTGACAGATGAGCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATAAGCAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CCA 90 bp | CCTTGGGAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTaGGTGGAGAGTGAGCATGGACTCAGGTATATTTCGAGATCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PWELECLRFSAEEHM*VESEHGLRYISRSL Trigger: TAAAGATCTCGAAATATACCTGAGTCCATGCTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTCCCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CCA 90 bp | CAGGATAAAGGTGACCTGTTGTGTTTGTTTTACTTGACTTTATTGTaGTACTGGGGATGGAACTCAGGGCTCACCTATGCTAGGCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: QDKGDLLCLFYLTLL*YWGWNSGLTYARQA Trigger: TGCTTGCCTAGCATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAGGTCACCTTTATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR GCA 90 bp | AAAGTATCTCCCTTTGAACTTCCTAATCACAACACTTTTATTCCCTaGTTCTCACTTGCCTTACTGCGAGGCGACAGTTATTTCCACGGG | + |
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Preference number: 1 (lower is better) Translates to: KVSPFELPNHNTFIP*FSLALLRGDSYFHG Trigger: CCCGTGGAAATAACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGAATAAAAGTGTTGTGATTAGGAAGTTCAAAGGGAGATACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR CCA 90 bp | AGTATCGGGAGTTCACATGCCCTGTTGTTGACGTTGCTTATTTTCTaGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATA | + |
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Preference number: 1 (lower is better) Translates to: SIGSSHALLLTLLIF*DTPQFLCVLCMIPI Trigger: TATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATAAGCAACGTCAACAACAGGGCATGTGAACTCCCGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CCA 90 bp | AAAGGTGACCTGTTGTGTTTGTTTTACTTGACTTTATTGTGGTACTaGGGATGGAACTCAGGGCTCACCTATGCTAGGCAAGCACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: KGDLLCLFYLTLLWY*GWNSGLTYARQALC Trigger: ACAAAGTGCTTGCCTAGCATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAGGTCACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR TCA 90 bp | TATTTCGAGATCTTTAAGCAACCCCAAGGAAGTAGGGCAACCCACTaGAGAATGAGATCGAATTTATCACCAGTGGAATGCTTGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: YFEIFKQPQGSRATH*RMRSNLSPVECLCV Trigger: GACACACAAGCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGGGTTGCCCTACTTCCTTGGGGTTGCTTAAAGATCTCGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR GCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGGTGTGTGTGCTTGTGTaGCTCCCCCATAGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PRRGGHGLGLASSGGHFRVCVLV*LPHSSS Trigger: AGAGGAGCTATGGGGGAGGCACACAAGCACACACAC...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR GCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGGCAGGAACAGGTGAGTaGTGTTGGTGGGGAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: PRRGGHGLGLASSGGHFRAGTGE*CWWGNQ Trigger: CTGATTTCCCCACCAACAGCACTCACCTGTTCCTGC...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGCTGACCTGCCAGCTCTaGACTCTCCCCCGTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ELECLRFSAEEHMWVESELTCQL*TLPRGS Trigger: ACTGCCACGGGGGAGAGTGCAGAGCTGGCAGGTCAG...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | TGTAACCCCAGTGCTGTGGAGACAAGCCAGGAGGATCACTGGGGCTaGCTGGATGTCAGAGTAGCTTTGGGTTCAGTGAGAGATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: CNPSAVETSQEDHWG*LDVRVALGSVRDLL Trigger: GAGAAGATCTCTCACTGAACCCAAAGCTACTCTGACATCCAGCAAGCCCCAGTGATCCTCCTGGCTTGTCTCCACAGCACTGGGGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | TGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTaGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGG | + |
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Preference number: 2 (lower is better) Translates to: WSRSGFQWRSLPAAI*SLSNLESQACSATW Trigger: CCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR TCA 90 bp | AATCTGATCGGTCTAGGCTGGGTATGCAAAGCTTCCCCAGGTGTCCTCCTGTCTCCTTTGAAACCCGCTTaGCATCAGGCATTTCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: NLIGLGWVCKASPGVLLSPLKPA*HQAFPA Trigger: CGCTGGAAATGCCTGATGTCAAGCGGGTTTCAAAGG...AGACAGGAGGACACCTGGGGAAGCTTTGCATACCCAGCCTAGACCGATCAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGACTCTGCAGAGCACTCTaGCCTCTGAGGTGCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRLCRAL*PLRCCV Trigger: GACACAGCACCTCAGAGGTCAGAGTGCTCTGCAGAG...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGCTGCATGTTAGGCACTaGAGGCTTGGGAGACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSLSNLESQACSATWPVRLHVRH*RLGRPS Trigger: AGAGGGTCTCCCAAGCCTCCAGTGCCTAACATGCAG...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGACTGATCGGTCTAGGCTaGGTATGCAAAGCTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRLIGLG*VCKASP Trigger: TGGGGAAGCTTTGCATACCCAGCCTAGACCGATCAG...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGACTGAGGTGCTGTGTCTaGTATCTTGCTCTTGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRLRCCV*YLALVR Trigger: CCTGACAAGAGCAAGATATCAGACACAGCACCTCAG...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACGCAGAAGAGCACATGTaGGTGGAGAGTGAGCATGGA | + |
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Preference number: 2 (lower is better) Translates to: ISFCVKSCPVNASRSLMYAEEHM*VESEHG Trigger: TCCATGCTCACTCTCCACCCACATGTGCTCTTCTGC...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR CCA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCCATCACCATGACAACTaGAATGGTCACATCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VIEWPRPELFSMGATSDSHHHDN*NGHICL Trigger: GAGACAGATGTGACCATTCCAGTTGTCATGGTGATG...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGCTTCGCCCCTTAGCCTaGGATCAGCAGCTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: LSLSNLESQACSATWPVRLRPLA*DQQLLF Trigger: AAAAAGAAGCTGCTGATCCCAGGCTAAGGGGCGAAG...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR CAA 90 bp | GGCTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTaGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCAATGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: GFFFQDLCVKEQRHP*QESYLSPVNSSMVR Trigger: CCTTACCATTGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGATTGGCTTACGGCTTCTaGAGGTTCCAGAATCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRLAYGF*RFQNQS Trigger: GCTTTGATTCTGGAACCTTCAGAAGCCGTAAGCCAA...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR GCA 90 bp | CCACTGAAGAATGAGATCGAATTTATCACCAGTGGAATGCTTGTGTGTCCAGAGGGGCAGGACAGAGCCTaGATGGCAGAAGAGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLKNEIEFITSGMLVCPEGQDRA*MAEELL Trigger: AAGAAGCTCTTCTGCCATGCAGGCTCTGTCCTGCCC...CTCTGGACACACAAGCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | TCTAGACAGCACTGCAAAGTGAATTCTGAGTGTGGCCTTGGGAGCTaGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SRQHCKVNSECGLGS*NVYVFLQKSTCGWR Trigger: TCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTCCCAAGGCCACACTCAGAATTCACTTTGCAGTGCTGTCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | GAGGAGCTGCTGTATGGAAGCCATGTACAGAGCTTCCCAGGAAGCTaGAGTTTTAGGTTCTTTGAAAGGAACATGAAGGGACACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EELLYGSHVQSFPGS*SFRFFERNMKGHRE Trigger: CTCTCTGTGTCCCTTCATGTTCCTTTCAAAGAACCTAAAACTCAAGCTTCCTGGGAAGCTCTGTACATGGCTTCCATACAGCAGCTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACCTTGTTGTCCAAGCATaGGGACTTGAGTTCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: ISFCVKSCPVNASRSLMYLVVQA*GLEFKS Trigger: GGACTTGAACTCAAGTCCTCATGCTTGGACAACAAG...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR TCA 90 bp | ATCACAACACTTTTATTCCCTGCTTCTCACTTGCCTTACTGCGAGGCGACAGTTCTCATCTTTTTGCCTTaGGAGAGAAGGCAGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: ITTLLFPASHLPYCEATVLIFLP*ERRQEQ Trigger: CTGTTCCTGCCTTCTCTCTCAAGGCAAAAAGATGAG...AACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGAATAAAAGTGTTGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCAAGAGCTTCTTGCCGGTaGTGCTTCATTGAGAGACGT | + |
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Preference number: 2 (lower is better) Translates to: CFMEILHKGFSNDTEHTSRASCR*CFIERR Trigger: ACGTCTCTCAATGAAGCAGCACCGGCAAGAAGCTCT...TGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR GCA 90 bp | ATCACAACACTTTTATTCCCTGCTTCTCACTTGCCTTACTGCGAGGCGACAGTTCCTGTCTCATCTTTTTaGCTTGAGAGAGAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ITTLLFPASHLPYCEATVPVSSF*LEREGR Trigger: CCTGCCTTCTCTCTCAAGGCAAAAAGATGAGACAGG...AACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGAATAAAAGTGTTGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR CAA 90 bp | GACGTTGCTTATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTaGCATGATTCCTATAGCTCATCTGTCACTTGGGATTCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: DVAYFLGHPTVPLCS*HDSYSSSVTWDSAT Trigger: TGTGGCAGAATCCCAAGTGACAGATGAGCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATAAGCAACGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | CAAGTAGTTATCAGTATCGGGAGTTCACATGCCCTGTTGTTGACGTaGCTTATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: QVVISIGSSHALLLT*LIFWDTPQFLCVLC Trigger: GCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATAAGCAACGTCAACAACAGGGCATGTGAACTCCCGATACTGATAACTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGATCTAAAGGGAGGGCATaGGCAGGACAGAGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CEESVLRVLEQDRKRTGRSKGRA*AGQSLH Trigger: ATGCAGGCTCTGTCCTGCCCATGCCCTCCCTTTAGA...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAGGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTTGGACTTGGAGGGAGGAGCTGCTGTATaGAAGCCATGTACAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LRGFCSLHSKCQLVLDLEGGAAV*KPCTEL Trigger: AAGCTCTGTACATGGCTTCCATACAGCAGCTCCTCC...CTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCCTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| 3UTR CAA 90 bp | TGTTGGATGTACACACAGAAATTTGTCAGTTATGAAGTGCTGGGTTaGAATTGCTTGCGAGTGAGTGAGCGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CWMYTQKFVSYEVLG*NCLRVSERERERER Trigger: TCTCTCTCTCTCTCTCTCTCGCTCACTCACTCGCAAGCAATTCAAACCCAGCACTTCATAACTGACAAATTTCTGTGTGTACATCCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR TCA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGAATGAAATCTGGATGTaGCTTCTGCATTCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: ELECLRFSAEEHMWVESENEIWM*LLHSSC Trigger: ACAAGAGGAATGCAGAAGTCACATCCAGATTTCATT...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR CCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCAGCAATGGTAGGAACTaGGGATTGAGCAGATGGGTA | + |
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Preference number: 2 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSSNGRN*GLSRWV Trigger: TACCCATCTGCTCAATCCCCAGTTCCTACCATTGCT...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR CAA 90 bp | ACAGTGAAGACACAGGATAAAGGTGACCTGTTGTGTTTGTTTTACTaGACTTTATTGTGGTACTGGGGATGGAACTCAGGGCTCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: TVKTQDKGDLLCLFY*TLLWYWGWNSGLTY Trigger: ATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAGGTCACCTTTATCCTGTGTCTTCACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR TCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACGAAATTTGTCAGTTATaGAGTGCTGGGTTTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: ISFCVKSCPVNASRSLMYEICQL*SAGFEL Trigger: CAATTCAAACCCAGCACTTCATAACTGACAAATTTC...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACAGTAGGGCAACCCACTaGAGAATGAGATCGAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: SWKFSTKASQMTRSTHHNSRATH*RMRSNL Trigger: TAAATTCGATCTCATTCTTCAGTGGGTTGCCCTACT...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGATTTGTTCTCTGCGCATaGGTGAGAAGACAGCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: CEESVLRVLEQDRKRTGRFVLCA*VRRQHP Trigger: TGGGTGCTGTCTTCTCACGCATGCGCAGAGAACAAA...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCAGGTGGGTTGGAATTTaGCTTCTTCTTTCAGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSRWVGI*LLLSGP Trigger: AGGTCCTGAAAGAAGAAGCCAAATTCCAACCCACCT...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CCA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTACAGGTGAGTGCTGTTaGTGGGGAAATCAGTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RMLCCQILPWVDEVELFITGECC*WGNQSF Trigger: GAAGGACTGATTTCCCCACCAACAGCACTCACCTGT...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGATATCGGGAGTTCACATaGCCTGTTGTTGACGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CEESVLRVLEQDRKRTGRYREFT*PVVDVA Trigger: AGCAACGTCAACAACAGGGCATGTGAACTCCCGATA...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR TCA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTGAGCTGTGCTTAAAGTaGATGATGCTATGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLELCLK*MMLWFL Trigger: CAGAAACCATAGCATCATTCACTTTAAGCACAGCTC...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR TCA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTTTCTCTGTACGAAAATaGGAGAAAATGACCGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLFSVRK*EKMTGA Trigger: AGCTCCGGTCATTTTCTCTCATTTTCGTACAGAGAA...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR TCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCGAGTTTTGTTTTCAATaGCCTTGGCTCACTGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSEFCFQ*PWLTEN Trigger: ATTCTCAGTGAGCCAAGGTCATTGAAAACAAAACTC...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGACTTGCAACATCACCATaGCAACTGGAATGGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: CEESVLRVLEQDRKRTGRLATSP*QLEWSH Trigger: ATGTGACCATTCCAGTTGTCATGGTGATGTTGCAAG...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CCA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTTTCATAGTCACAAGGTaGGTTGGAATTTGGCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLFIVTR*VGIWLL Trigger: AAGAAGCCAAATTCCAACCCACCTTGTGACTATGAA...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCGGTGAACTCATCTCATaGGTTTTTCAGTTATTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSGELIS*VFQLFL Trigger: GAGAAATAACTGAAAAACCCATGAGATGAGTTCACC...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR GCA 72 bp | AAGGGCTTCCGGGGCTTGAGGGATGCGCTGGGGATCTaGGTGGAGAGCAGGTCAAAGGTCCCAGCATCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KGFRGLRDALGI*VESRSKVPASH Trigger: GTGGGATGCTGGGACCTTTGACCTGCTCTCCACGCAGATCCCCAGCGCATCCCTCAAGCCCCGGAAGCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | GAGTGTGGCCCTTGTGTCCCTGTAACCCCAGTGCTGTaGAGACAAGCCAGGAGGATCACTGGGGCTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ECGPCVPVTPVL*RQARRITGACW Trigger: CCAGCAAGCCCCAGTGATCCTCCTGGCTTGTCTCCACAGCACTGGGGTTACAGGGACACAAGGGCCACACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR GCA 72 bp | TGGCATTTAACAGAAGGGCTTCCGGGGCTTGAGGGATaGGCTGGGGATCTGCGTGGAGAGCAGGTCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WHLTEGLPGLEG*AGDLRGEQVKG Trigger: ACCTTTGACCTGCTCTCCACGCAGATCCCCAGCGCATCCCTCAAGCCCCGGAAGCCCTTCTGTTAAATGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | AAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTaGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: KTGWPWSRSGFQ*RSLPAAILSLS Trigger: GGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR TCA 72 bp | AGCCCTGTGAACAGCTCAATGGTAAGGAGACATAACTaGCCTGCCAGCTCTGCACTCTCCCCCGTGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPVNSSMVRRHN*PASSALSPVAV Trigger: CACTGCCACGGGGGAGAGTGCAGAGCTGGCAGGTCAGTTATGTCTCCTTACCATTGAGCTGTTCACAGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | CACAGCTCCGTGTGCAGTGGCTGTAGACCTGGTACTTaGCTTACGGCTTCTGAAGGTTCCAGAATCAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSSVCSGCRPGT*LTASEGSRIKA Trigger: GGCTTTGATTCTGGAACCTTCAGAAGCCGTAAGCCAAGTACCAGGTCTACAGCCACTGCACACGGAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR GCA 72 bp | TGGAGGCATTTTGTTTCAGTGGTGTGTGTGTGTGTGTaGGTGTGTGTGTGCTTGTGTGCCTCCCCCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: WRHFVSVVCVCV*VCVCLCASPIA Trigger: AGCTATGGGGGAGGCACACAAGCACACACACACGCACACACACACACACACCACTGAAACAAAATGCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CCA 72 bp | CTGTCATCGAATGGCCTAGGCCAGAACTATTCAGCATaGGAGCCACTAGTGACTCCCAAGTCCTCAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSNGLGQNYSA*EPLVTPKSSKV Trigger: CACCTTTGAGGACTTGGGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | TTATTGACTACAACGCGCCTTGGAGGAGCTGCTGTATaGAAGCCATGTACAGAGCTTCCCAGGAAGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLTTTRLGGAAV*KPCTELPRKLE Trigger: CTCAAGCTTCCTGGGAAGCTCTGTACATGGCTTCCATACAGCAGCTCCTCCAAGGCGCGTTGTAGTCAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR TCA 72 bp | GATCGCAGCTCTAGTGACGCTCTTGCAACATCACCATaGCAACTGGAATGGTCACATCTGTCTCATCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: DRSSSDALATSP*QLEWSHLSHLP Trigger: TGGTAGATGAGACAGATGTGACCATTCCAGTTGTCATGGTGATGTTGCAAGAGCGTCACTAGAGCTGCGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGAAGGTGGGTTGGAATTaGGCTTCTTCTTTCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: ELECLRFSAEEHMWVESEKVGWN*ASSFRT Trigger: GGTCCTGAAAGAAGAAGCCAAATTCCAACCCACCTT...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCTGCGTGTGTGTGTGCTaGTGTGCCTCCCCCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSRIKALNIVCSLRGFCSCVCVC*CASPIA Trigger: AGCTATGGGGGAGGCACACAAGCACACACACACGCA...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACGCCCTGTTGTTGACGTaGCTTATTTTCTGGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: SWKFSTKASQMTRSTHHNALLLT*LIFWDT Trigger: GGTGTCCCAGAAAATAAGCAACGTCAACAACAGGGC...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR TCA 72 bp | AGCAACCCCAAGGAAGTAGGGCAACCCACTGAAGAATaGGATCGAATTTATCACCAGTGGAATGCTTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SNPKEVGQPTEE*DRIYHQWNACV Trigger: CACACAAGCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGGGTTGCCCTACTTCCTTGGGGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR TCA 72 bp | CTGCTTCATGGAAATTCTCCACAAAGGCTTCTCAAATaGCACGGAGCACACATCACAACAGAGGTGATCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLHGNSPQRLLK*HGAHITTEVIA Trigger: TGCGATCACCTCTGTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR TCA 72 bp | CTGTGTCTGATATCTTGCTCTTGTCAGGTTGTTTATTaGCTACAACGCGCCTTGGAGGAGCTGCTGTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCLISCSCQVVY*LQRALEELLYG Trigger: TCCATACAGCAGCTCCTCCAAGGCGCGTTGTAGTCAATAAACAACCTGACAAGAGCAAGATATCAGACACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CCA 72 bp | CCACTTTCTCTCCCTTTCGTCTTCATAGTCACAAGGTaGGTTGGAATTTGGCTTCTTCTTTCAGGACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSLPFVFIVTR*VGIWLLLSGPL Trigger: CAGAGGTCCTGAAAGAAGAAGCCAAATTCCAACCCACCTTGTGACTATGAAGACGAAAGGGAGAGAAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCTCACCAGTGGAATGCTaGTGTGTCCAGAGCAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSSPVEC*CVQSSL Trigger: CAAACTGCTCTGGACACACAAGCATTCCACTGGTGA...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACCACCCCACAGTTCCTTaGTGTTCTTTGCATGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: SWKFSTKASQMTRSTHHNHPTVP*CSLHDS Trigger: GGAATCATGCAAAGAACACAAAGGAACTGTGGGGTG...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR GCA 72 bp | CAGAAATTTGTCAGTTATGAAGTGCTGGGTTTGAATTaGTTGCGAGTGAGTGAGCGAGAGAGAGAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKFVSYEVLGLN*LRVSERERERE Trigger: CTCTCTCTCTCTCTCTCGCTCACTCACTCGCAAGCAATTCAAACCCAGCACTTCATAACTGACAAATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | GGTGACCTGTTGTGTTTGTTTTACTTGACTTTATTGTaGTACTGGGGATGGAACTCAGGGCTCACCTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GDLLCLFYLTLL*YWGWNSGLTYA Trigger: AGCATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAGGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGACTGGGTTTGAATTGCTaGCGAGTGAGTGAGCGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CEESVLRVLEQDRKRTGRLGLNC*RVSERE Trigger: CTCTCGCTCACTCACTCGCAAGCAATTCAAACCCAG...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACGTTCCTTTGTGTTCTTaGCATGATTCCTATAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ISFCVKSCPVNASRSLMYVPLCS*HDSYSS Trigger: TGAGCTATAGGAATCATGCAAAGAACACAAAGGAAC...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR TCA 72 bp | ATCTTTAAGCAACCCCAAGGAAGTAGGGCAACCCACTaGAGAATGAGATCGAATTTATCACCAGTGGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: IFKQPQGSRATH*RMRSNLSPVEC Trigger: GCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGGGTTGCCCTACTTCCTTGGGGTTGCTTAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR GCA 72 bp | CATCTACCAAGTAGTTATCAGTATCGGGAGTTCACATaGCCTGTTGTTGACGTTGCTTATTTTCTGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: HLPSSYQYREFT*PVVDVAYFLGH Trigger: GTGTCCCAGAAAATAAGCAACGTCAACAACAGGGCATGTGAACTCCCGATACTGATAACTACTTGGTAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | AATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTaGAGAGTGAGCATGGACTCAGGTATATTTCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NVYVFLQKSTCG*RVSMDSGIFRD Trigger: ATCTCGAAATATACCTGAGTCCATGCTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | TGTTTGTTTTACTTGACTTTATTGTGGTACTGGGGATaGAACTCAGGGCTCACCTATGCTAGGCAAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: CLFYLTLLWYWG*NSGLTYARQAL Trigger: AAGTGCTTGCCTAGCATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CCA 72 bp | CTGTTGTGTTTGTTTTACTTGACTTTATTGTGGTACTaGGGATGGAACTCAGGGCTCACCTATGCTAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLCLFYLTLLWY*GWNSGLTYARQ Trigger: TTGCCTAGCATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR GCA 72 bp | ATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTaGATGATTCCTATAGCTCATCTGTCACTTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFWDTPQFLCVL*MIPIAHLSLGI Trigger: AATCCCAAGTGACAGATGAGCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACTGTACACACAGAAATTaGTCAGTTATGAAGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWKFSTKASQMTRSTHHNCTHRN*SVMKCW Trigger: CCAGCACTTCATAACTGACAAATTTCTGTGTGTACA...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTGGACTTGGAGGCATTTaGTTTCAGTGGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RMLCCQILPWVDEVELFIGLGGI*FQWCVC Trigger: ACACACACACCACTGAAACAAAATGCCTCCAAGTCC...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTACTTTACTTTCTGTGTaGGCACCGTATAAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLTLLSV*APYKSQ Trigger: CTGACTTTTATACGGTGCCAACACAGAAAGTAAAGT...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR TCA 72 bp | AAGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATaGGGTAGAGCTATTTATTGCTTACCGTTTATCGGA | + |
|
Preference number: 3 (lower is better) Translates to: KDALLPNSTLGR*GRAIYCLPFIG Trigger: TCCGATAAACGGTAAGCAATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CCA 72 bp | TGTGTAATTACTATCAACACGCTAATGACTGCTTCATaGAAATTCTCCACAAAGGCTTCTCAAATGACACGG | + |
|
Preference number: 3 (lower is better) Translates to: CVITINTLMTAS*KFSTKASQMTR Trigger: CCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCAGTCATTAGCGTGTTGATAGTAATTACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCTCTGATATCTTGCTCTaGTCAGGTTGTTTATTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GSRIKALNIVCSLRGFCSSDILL*SGCLLT Trigger: AGTCAATAAACAACCTGACAAGAGCAAGATATCAGA...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTAAGTGCCAATTAGTTTaGGACTTGGAGGCATTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RMLCCQILPWVDEVELFIKCQLV*DLEAFC Trigger: ACAAAATGCCTCCAAGTCCAAAACTAATTGGCACTT...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTTCCAGAATCAAAGCCTaGAACATTGTTTGTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RMLCCQILPWVDEVELFISRIKA*NIVCSL Trigger: CAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGA...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGTGCACTGGGATGGGCTaGCAGAGCAGTCTAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRGGHGLGLASSGGHFRCTGMG*QSSLGF Trigger: GAATCCTAGACTGCTCTGGCAGCCCATCCCAGTGCA...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAACAGGTGAGTGCTGTTGGTGGGGAAATCAGTCCTTCGCCCCTTAGCCTGGCAAGAAGCCAAGGCTaGGGCTTGCTGTCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEQVSAVGGEISPSPLSLARSQG*GLLSGS Trigger: TGAGCCGGACAGCAAGCCTCAGCCTTGGCTTCTTGC...CAGGCTAAGGGGCGAAGGACTGATTTCCCCACCAACAGCACTCACCTGTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGCACGGTAGTGTCGTGTaGGGAATACATGACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRRGGHGLGLASSGGHFRHGSVV*GIHDQL Trigger: AAGCTGGTCATGTATTCCGCACACGACACTACCGTG...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGTGGAGGAAACAGGGCTaGAAGGTTTGTCATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PRRGGHGLGLASSGGHFRWRKQG*KVCHST Trigger: AGTGCTATGACAAACCTTGCAGCCCTGTTTCCTCCA...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCAGACACGGTGTGCACTaGGATGGGCTGCCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIEWPRPELFSMGATSDSRHGVH*DGLPEQ Trigger: CTGCTCTGGCAGCCCATCCCAGTGCACACCGTGTCT...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGTCCGTGGCCCAGTCCTaGGAGATCACCGGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSNLESQACSATWPVRSVAQS*EITGSS Trigger: ACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGA...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCCCCAGGAGGGCAAGGTaGAATTGTGAACACTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VIEWPRPELFSMGATSDSPRRAR*NCEHSR Trigger: GCGAGAGTGTTCACAATTTCACCTTGCCCTCCTGGG...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | AATCTGATCGGTCTAGGCTGGGTATGCAAAGCTTCCCCAGGTGTCCTCCTGTCTCCCAGGAGGGCAAGGTaGAATTGTGAACACTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLIGLGWVCKASPGVLLSPRRAR*NCEHSR Trigger: GCGAGAGTGTTCACAATTTCACCTTGCCCTCCTGGG...AGACAGGAGGACACCTGGGGAAGCTTTGCATACCCAGCCTAGACCGATCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCTCAGCACTTGGTGGCTaGTTGTGGCCATACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VIEWPRPELFSMGATSDSSALGG*LWPYTP Trigger: CGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGA...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGCTTGGTGGCTGCTTGTaGCCATACACTCCGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSNLESQACSATWPVRLGGCL*PYTPWP Trigger: GGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAG...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CAA 72 bp | AGTGCTGTGGAGACAAGCCAGGAGGATCACTGGGGCTaGCTGGATGTCAGAGTAGCTTTGGGTTCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAVETSQEDHWG*LDVRVALGSVR Trigger: TCTCACTGAACCCAAAGCTACTCTGACATCCAGCAAGCCCCAGTGATCCTCCTGGCTTGTCTCCACAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCAATGGTAAGGAGACATGCAAGAAGCCAAGGCTaGGGCTTGCTGTCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLQESYLSPVNSSMVRRHARSQG*GLLSGS Trigger: TGAGCCGGACAGCAAGCCTCAGCCTTGGCTTCTTGC...ATGTCTCCTTACCATTGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGATGGCCATACACTCCGTaGCCCAGTCCTGGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRWPYTP*PSPGRS Trigger: TGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCA...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCAATGGTAAGGAGACATCCATGCCCCACTGGGTaGGTTGGCCAAATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLQESYLSPVNSSMVRRHPCPTG*VGQILV Trigger: CACAAGGATTTGGCCAACTCACCCAGTGGGGCATGG...ATGTCTCCTTACCATTGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | CTGAGAGGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTTGGACTTGGAGGCCAAGGCTGAGGCTTaGTGTCCGGCTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRGFCSLHSKCQLVLDLEAKAEA*CPAQGQ Trigger: CTGCCCCTGAGCCGGACAGCAAGCCTCAGCCTTGGC...CTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCCTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGACATCTAGCGCCATCTaGAGGCCACTCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSNLESQACSATWPVRTSSAI*RPLTVV Trigger: CACTACCGTGAGTGGCCTGCAGATGGCGCTAGATGT...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGCTCCTTGGCTTGGCCTaGGTCCAGGCAGAGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELECLRFSAEEHMWVESELLGLA*VQAERK Trigger: CTTTCTCTCTGCCTGGACCCAGGCCAAGCCAAGGAG...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | CCAAGACGGGGTGGCCATGGTCTAGGTCTGGCTTCCAGTGGAGGTCACTTCCGGCTTTTTATACTTCTGTaGCTGAGTTGCAAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRRGGHGLGLASSGGHFRLFILL*LSCKLH Trigger: ATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAG...CCGGAAGTGACCTCCACTGGAAGCCAGACCTAGACCATGGCCACCCCGTCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | CCACTGAAGAATGAGATCGAATTTATCACCAGTGGAATGCTTGTGTGTCCAGAGTCCGTGGCCCAGTCCTaGGAGATCACCGGGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKNEIEFITSGMLVCPESVAQS*EITGSS Trigger: ACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGA...CTCTGGACACACAAGCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTTGCAAGAGTCTGGCCATACACTCCGTaGCCCAGTCCTGGGAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSGPLCKRAEASLARVWPYTP*PSPGRS Trigger: TGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCA...GACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCATAACCCTCAGCACTTaGTGGCTGCTTGTGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VIEWPRPELFSMGATSDSITLST*WLLVAI Trigger: TATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTAT...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTTGCAAGAGTCTGCACTGGGATGGGCTaGCAGAGCAGTCTAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSGPLCKRAEASLARVCTGMG*QSSLGF Trigger: GAATCCTAGACTGCTCTGGCAGCCCATCCCAGTGCA...GACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACGATACACATCTCTCTaGCAGCAGGGCCCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFMEILHKGFSNDTEHTSRYTSL*QQGPWR Trigger: CCGCCATGGGCCCTGCTGGCAGAGAGATGTGTATCG...TGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | ATCACAACACTTTTATTCCCTGCTTCTCACTTGCCTTACTGCGAGGCGACAGTTCTCCTTGGCTTGGCCTaGGTCCAGGCAGAGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITTLLFPASHLPYCEATVLLGLA*VQAERK Trigger: CTTTCTCTCTGCCTGGACCCAGGCCAAGCCAAGGAG...AACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGAATAAAAGTGTTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGAGCCAAGGCTGAGGCTTaGTGTCCGGCTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CEESVLRVLEQDRKRTGRAKAEA*CPAQGQ Trigger: CTGCCCCTGAGCCGGACAGCAAGCCTCAGCCTTGGC...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACCCCCACTGGGTGAGTTaGCCAAATCCTTGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWKFSTKASQMTRSTHHNPHWVS*PNPCGH Trigger: GTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGG...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTTGGACTTGGAGAGACACGGTGTGCACTaGGATGGGCTGCCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRGFCSLHSKCQLVLDLERHGVH*DGLPEQ Trigger: CTGCTCTGGCAGCCCATCCCAGTGCACACCGTGTCT...CTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGACCAGGACGCCCCCTTaGAGTCGAGATTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELECLRFSAEEHMWVESETRTPP*SRDFSF Trigger: GAAAGAGAAATCTCGACTCCAAGGGGGCGTCCTGGT...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | CCACTGAAGAATGAGATCGAATTTATCACCAGTGGAATGCTTGTGTGTCCAGAGAACGAGGGCAGTCTCTaGAAGGCAGGTACAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PLKNEIEFITSGMLVCPENEGSL*KAGTAT Trigger: GGTTGCTGTACCTGCCTTTCAGAGACTGCCCTCGTT...CTCTGGACACACAAGCATTCCACTGGTGATAAATTCGATCTCATTCTTCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACCACGGTAGTGTCGTGTaGGGAATACATGACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISFCVKSCPVNASRSLMYHGSVV*GIHDQL Trigger: AAGCTGGTCATGTATTCCGCACACGACACTACCGTG...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCAACATCTAGCGCCATCTaGAGGCCACTCACGGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFMEILHKGFSNDTEHTSTSSAI*RPLTVV Trigger: CACTACCGTGAGTGGCCTGCAGATGGCGCTAGATGT...TGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACCAAACTTCAACTCCTTaGCTTGGCCTGGGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWKFSTKASQMTRSTHHNQTSTP*LGLGPG Trigger: GCCTGGACCCAGGCCAAGCCAAGGAGTTGAAGTTTG...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACACCCTCAGCACTTGGTaGCTGCTTGTGGCCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: SWKFSTKASQMTRSTHHNTLSTW*LLVAIH Trigger: GTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGT...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | TTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTaGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FQDLCVKEQRHP*QESYLSPVNSS Trigger: TGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | GCTGTGTCTGATATCTTGCTCTTGTCAGGTTGTTTATaGACTACAACGCGCCTTGGAGGAGCTGCTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSDILLLSGCL*TTTRLGGAAVW Trigger: CCATACAGCAGCTCCTCCAAGGCGCGTTGTAGTCAATAAACAACCTGACAAGAGCAAGATATCAGACACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCCCATGCCCCACTGGGTaGGTTGGCCAAATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSPCPTG*VGQILV Trigger: CACAAGGATTTGGCCAACTCACCCAGTGGGGCATGG...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCAATGGTAAGGAGACATTGGAGGAAACAGGGCTaGAAGGTTTGTCATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLQESYLSPVNSSMVRRHWRKQG*KVCHST Trigger: AGTGCTATGACAAACCTTGCAGCCCTGTTTCCTCCA...ATGTCTCCTTACCATTGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGACTTGGTGGCTGCTTGTaGCCATACACTCCGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CEESVLRVLEQDRKRTGRLGGCL*PYTPWP Trigger: GGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAG...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGAGGCAAGGTGAAATTGTaGACACTCTCGCAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRGKVKL*TLSQNK Trigger: TTTATTCTGCGAGAGTGTTCACAATTTCACCTTGCC...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCGGACCTCGGTCTCCATaGCGAAACACCAATGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSGPRSP*RNTNVT Trigger: TGTGACATTGGTGTTTCGGCATGGAGACCGAGGTCC...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGCTTCTGTGGCTGAGTTaGAAGCTTCATATTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSNLESQACSATWPVRLLWLS*KLHILE Trigger: CTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAG...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTTCCGTCCTTGGTGGCTaGTTGTGGCCATACACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RMLCCQILPWVDEVELFISVLGG*LWPYTP Trigger: CGGAGTGTATGGCCACAAGCAGCCACCAAGGACGGA...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCCAAACTTCAACTCCTTaGCTTGGCCTGGGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSQTSTP*LGLGPG Trigger: GCCTGGACCCAGGCCAAGCCAAGGAGTTGAAGTTTG...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTCCCCACTGGGTGAGTTaGCCAAATCCTTGTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RMLCCQILPWVDEVELFIPHWVS*PNPCGH Trigger: GTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGG...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CAA 72 bp | ATCAGTATCGGGAGTTCACATGCCCTGTTGTTGACGTaGCTTATTTTCTGGGACACCCCACAGTTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISIGSSHALLLT*LIFWDTPQFLC Trigger: ACAAAGGAACTGTGGGGTGTCCCAGAAAATAAGCAACGTCAACAACAGGGCATGTGAACTCCCGATACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | GTAGTTATCAGTATCGGGAGTTCACATGCCCTGTTGTaGACGTTGCTTATTTTCTGGGACACCCCACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVISIGSSHALL*TLLIFWDTPQF Trigger: GAACTGTGGGGTGTCCCAGAAAATAAGCAACGTCAACAACAGGGCATGTGAACTCCCGATACTGATAACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | TTCCTAATCACAACACTTTTATTCCCTGCTTCTCACTaGCCTTACTGCGAGGCGACAGTTATTTCCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLITTLLFPASH*PYCEATVISTG Trigger: CCCCGTGGAAATAACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGAATAAAAGTGTTGTGATTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTTGAATGTCTACGTTTTTCTGCAGAAGAGCACATGTGGGTGGAGAGTGAGCGTGTGCGGAATACATaGCCAGCTTTTTATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELECLRFSAEEHMWVESERVRNT*PAFYTS Trigger: AGAAGTATAAAAAGCTGGTCATGTATTCCGCACACG...CTCACTCTCCACCCACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR GCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCGGACCTCGGTCTCCATaGCGAAACACCAATGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSGPRSP*RNTNVT Trigger: TGTGACATTGGTGTTTCGGCATGGAGACCGAGGTCC...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACCTTCTGTGGCTGAGTTaGAAGCTTCATATTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISFCVKSCPVNASRSLMYLLWLS*KLHILE Trigger: CTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAG...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTTGTTCCATGCCCCACTaGGTGAGTTGGCCAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLCSMPH*VSWPNP Trigger: AGGATTTGGCCAACTCACCCAGTGGGGCATGGAACA...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCTGTTCCATGCCCCACTaGGTGAGTTGGCCAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSCSMPH*VSWPNP Trigger: AGGATTTGGCCAACTCACCCAGTGGGGCATGGAACA...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCACCAGGACGCCCCCTTaGAGTCGAGATTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSTRTPP*SRDFSF Trigger: GAAAGAGAAATCTCGACTCCAAGGGGGCGTCCTGGT...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CAA 72 bp | CACTGCAAAGTGAATTCTGAGTGTGGCCTTGGGAGCTaGAATGTCTACGTTTTTCTGCAGAAGAGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: HCKVNSECGLGS*NVYVFLQKSTC Trigger: ACATGTGCTCTTCTGCAGAAAAACGTAGACATTCAAGCTCCCAAGGCCACACTCAGAATTCACTTTGCAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | TGCTTCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACTAAAGTCTCACTCTTaGGTTCTTCAAAACGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFMEILHKGFSNDTEHTSLKSHS*VLQNEG Trigger: GCCCTCGTTTTGAAGAACTCAAGAGTGAGACTTTAG...TGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | TACACACAGAAATTTGTCAGTTATGAAGTGCTGGGTTaGAATTGCTTGCGAGTGAGTGAGCGAGAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTQKFVSYEVLG*NCLRVSERERE Trigger: CTCTCTCTCTCGCTCACTCACTCGCAAGCAATTCAAACCCAGCACTTCATAACTGACAAATTTCTGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | CTGTATGGAAGCCATGTACAGAGCTTCCCAGGAAGCTaGAGTTTTAGGTTCTTTGAAAGGAACATGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYGSHVQSFPGS*SFRFFERNMKG Trigger: TCCCTTCATGTTCCTTTCAAAGAACCTAAAACTCAAGCTTCCTGGGAAGCTCTGTACATGGCTTCCATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTTGGACTTGGAGCTAAAGTCTCACTCTTaGGTTCTTCAAAACGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRGFCSLHSKCQLVLDLELKSHS*VLQNEG Trigger: GCCCTCGTTTTGAAGAACTCAAGAGTGAGACTTTAG...CTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCCTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTTGCAAGAGTCAAGCTTTTATATGGATaGAGCCTCTTCAAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSGPLCKRAEASLARVKLLYG*SLFKNS Trigger: GGAATTCTTGAAGAGGCTTCATCCATATAAAAGCTT...GACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCTTGGCCAAATCCTTGTaGCCACGAGGATTCTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSLAKSL*PRGFCN Trigger: ATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAA...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACCAGGAAGCTTTTATATaGATGAAGCCTCTTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFCVKSCPVNASRSLMYQEAFI*MKPLQE Trigger: TTCTTGAAGAGGCTTCATCCATATAAAAGCTTCCTG...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTaGCATGATTCCTATAGCTCATCTGTCACTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YFLGHPTVPLCS*HDSYSSSVTWD Trigger: ATCCCAAGTGACAGATGAGCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | AAAGGTGACCTGTTGTGTTTGTTTTACTTGACTTTATaGTGGTACTGGGGATGGAACTCAGGGCTCACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGDLLCLFYLTL*WYWGWNSGLTY Trigger: ATAGGTGAGCCCTGAGTTCCATCCCCAGTACCACAATAAAGTCAAGTAAAACAAACACAACAGGTCACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | TGGCTTACGGCTTCTGAAGGTTCCAGAATCAAAGCCTaGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLTASEGSRIKA*NIVCSLRGFCS Trigger: GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACCTTCAGAAGCCGTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTGGGACACCCCACAGTTCCTTTGTGTTCTTTGCATGATTCCTATAGCGGCAAGGTGAAATTGTaGACACTCTCGCAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLGHPTVPLCSLHDSYSGKVKL*TLSQNK Trigger: TTTATTCTGCGAGAGTGTTCACAATTTCACCTTGCC...GCTATAGGAATCATGCAAAGAACACAAAGGAACTGTGGGGTGTCCCAGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | GGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTaGGACTTGGAGGCATTTTGTTTCAGTGGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFCSLHSKCQLV*DLEAFCFSGVC Trigger: ACACACACCACTGAAACAAAATGCCTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CAA 72 bp | GCACCAAACAATGTCCTGTACTGGCTCTCTGAGGTATaGAGGACACAACAGATAAAATTCTTGCTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: APNNVLYWLSEV*RTQQIKFLLCR Trigger: TCTACAAAGCAAGAATTTTATCTGTTGTGTCCTCAATACCTCAGAGAGCCAGTACAGGACATTGTTTGGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR TCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCCGTGTGCGGAATACATaGCCAGCTTTTTATACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSRVRNT*PAFYTS Trigger: AGAAGTATAAAAAGCTGGTCATGTATTCCGCACACG...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGATCCTGTCCACATCTGTaGTCCGGATATAAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CEESVLRVLEQDRKRTGRSCPHL*SGYKSD Trigger: ATCAGATTTATATCCGGAGCACAGATGTGGACAGGA...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR TCA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCAAGCTTTTATATGGATaGAGCCTCTTCAAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRIKALNIVCSLRGFCSKLLYG*SLFKNS Trigger: GGAATTCTTGAAGAGGCTTCATCCATATAAAAGCTT...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| 3UTR CAA 72 bp | TTAGCCCTATCTAGGGTGCCAACATTTCACGATTGTTaGGATAGTTTCTTGGAGAGGGTTTTAAAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LALSRVPTFHDC*DSFLERVLKEK Trigger: TTTCTCTTTTAAAACCCTCTCCAAGAAACTATCCAAACAATCGTGAAATGTTGGCACCCTAGATAGGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CCA 90 bp | AGGATGCTTTGTTGCCAAATTCTACCTTGGGTAGATGAGGTAGAGCTATTTATTCAGGAAGCTTTTATATaGATGAAGCCTCTTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RMLCCQILPWVDEVELFIQEAFI*MKPLQE Trigger: TTCTTGAAGAGGCTTCATCCATATAAAAGCTTCCTG...AATAAATAGCTCTACCTCATCTACCCAAGGTAGAATTTGGCAACAAAGCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGAATCAGTGCTAAGAGTATTAGAACAAGACAGAAAAAGGACAGGAAGACTTTTTATACTTCTGTaGCTGAGTTGCAAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CEESVLRVLEQDRKRTGRLFILL*LSCKLH Trigger: ATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAG...TCTTCCTGTCCTTTTTCTGTCTTGTTCTAATACTCTTAGCACTGATTCCTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| 3UTR CAA 72 bp | AGGGTGCCAACATTTCACGATTGTTTGGATAGTTTCTaGGAGAGGGTTTTAAAAGAGAAAGCCGTTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: RVPTFHDCLDSF*ERVLKEKAVII Trigger: AATTATAACGGCTTTCTCTTTTAAAACCCTCTCCAAGAAACTATCCAAACAATCGTGAAATGTTGGCACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS CCA 90 bp | CGTCCTTGGTGGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTaGGAGATCACCGGGTCCAGTAGCTCCGCAAACTTCTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPWWLLVAIHSVAQS*EITGSSSSANFSRG Trigger: CCCTCTGGAGAAGTTTGCGGAGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS CCA 90 bp | AGCACTTGGTGGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTaGGAGATCACCGGGTCCAGTAGCTCCGCAAACTTCTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: STWWLLVAIHSVAQS*EITGSSSSANFSRG Trigger: CCCTCTGGAGAAGTTTGCGGAGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS CCA 90 bp | AGGCAGGTACAGCAACCGATCCTCAGAGAGAGACACGGTGTGCACTaGGATGGGCTGCCAGAGCAGTCTAGGATTCCAGATGCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQVQQPILRERHGVH*DGLPEQSRIPDADP Trigger: GGGATCAGCATCTGGAATCCTAGACTGCTCTGGCAGCCCATCCCAGTGCACACCGTGTCTCTCTCTGAGGATCGGTTGCTGTACCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 ENSMUST00000215852.2 |
||
| CDS CCA 90 bp | CCGGTTACCAGGCAAAATGTAGTGGCAAGGATAACCCTCAGCACTTaGTGGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTRQNVVARITLST*WLLVAIHSVAQSWE Trigger: CTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCTGGTAACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS CCA 90 bp | GTTACCAGGCAAAATGTAGTGGCAAGGATAACCCTCAGCACTTGGTaGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTGGGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VTRQNVVARITLSTW*LLVAIHSVAQSWEI Trigger: GATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCTGGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS TCA 90 bp | AGATGTTCCGATACACATCTCTCTGCCAGCAGGGCCCATGGCGGATaGGGACAAGCAGAAGTATCACCAGGATCCCGGTTACCAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RCSDTHLSASRAHGG*GQAEVSPGSRLPGK Trigger: TTTGCCTGGTAACCGGGATCCTGGTGATACTTCTGCTTGTCCTCATCCGCCATGGGCCCTGCTGGCAGAGAGATGTGTATCGGAACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS CCA 90 bp | GTAGTGCTGTTCCATGCCCCACTGGGTGAGTTGGCCAAATCCTTGTaGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAAGGTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VVLFHAPLGELAKSL*PRGFCNGVGRKGLD Trigger: ATCGAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAACAGCACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTTCCAGTGGAGGTCACTTCCGGCAGCCATCTTGTCTCTATCCAATTTAGAGTCCTTGGTGGCTGCTaGTGGCCATACACTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLPVEVTSGSHLVSIQFRVLGGC*WPYTPW Trigger: CCACGGAGTGTATGGCCACAAGCAGCCACCAAGGAC...TCTAAATTGGATAGAGACAAGATGGCTGCCGGAAGTGACCTCCACTGGAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS CCA 90 bp | GATGGGCTGCCAGAGCAGTCTAGGATTCCAGATGCTGATCCCCTCTaGAGGAAACAGGGCTGCAAGGTTTGTCATAGCACTCATCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DGLPEQSRIPDADPL*RKQGCKVCHSTHQS Trigger: ACTTTGATGAGTGCTATGACAAACCTTGCAGCCCTGTTTCCTCCAGAGGGGATCAGCATCTGGAATCCTAGACTGCTCTGGCAGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 ENSMUST00000215852.2 |
||
| CDS-3UTR CAA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACCTTCAACTCCTTGGCTaGGCCTGGGTCCAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWKFSTKASQMTRSTHHNLQLLG*AWVQAE Trigger: CTCTGCCTGGACCCAGGCCAAGCCAAGGAGTTGAAG...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CAA 90 bp | CAGGAACAGGTGAGTGCTGTTGGTGGGGAAATCAGTCCTTCGCCCCTTAGCCTGTCTAAAGTCTCACTCTaGAGTTCTTCAAAACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QEQVSAVGGEISPSPLSLSKVSL*SSSKRG Trigger: CCCTCGTTTTGAAGAACTCAAGAGTGAGACTTTAGA...CAGGCTAAGGGGCGAAGGACTGATTTCCCCACCAACAGCACTCACCTGTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CAA 90 bp | TTGTCTCTATCCAATTTAGAATCCCAGGCGTGTTCTGCCACATGGCCAGTCAGGTTCTTGAGGATTTCATaGACCAGGACGCCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSNLESQACSATWPVRFLRIS*TRTPPW Trigger: CCAAGGGGGCGTCCTGGTCAATGAAATCCTCAAGAA...CCTGACTGGCCATGTGGCAGAACACGCCTGGGATTCTAAATTGGATAGAGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CAA 90 bp | TCATGGAAATTCTCCACAAAGGCTTCTCAAATGACACGGAGCACACATCACAACGCACTTGGTGGCTGCTaGTGGCCATACACTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWKFSTKASQMTRSTHHNALGGC*WPYTPW Trigger: CCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGC...GTTGTGATGTGTGCTCCGTGTCATTTGAGAAGCCTTTGTGGAGAATTTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CAA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACGATAACCCTCAGCACTaGGTGGCTGCTTGTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ISFCVKSCPVNASRSLMYDNPQH*VAACGH Trigger: ATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATC...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS CCA 90 bp | ATCTGTGCTCCGGATATAAATCTGGGTGAGTTGGCCAAATCCTTGTaGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAAGGTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ICAPDINLGELAKSL*PRGFCNGVGRKGLD Trigger: ATCGAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGCACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGGATTTTGTAGCCTACACTCAAAGTGCCAATTAGTTTTGGACTTGGAGCTTCAACTCCTTGGCTaGGCCTGGGTCCAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRGFCSLHSKCQLVLDLELQLLG*AWVQAE Trigger: CTCTGCCTGGACCCAGGCCAAGCCAAGGAGTTGAAG...CTCCAAGTCCAAAACTAATTGGCACTTTGAGTGTAGGCTACAAAATCCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
||
| CDS-3UTR CAA 90 bp | ATCAGCTTTTGTGTAAAAAGCTGCCCAGTGAATGCCAGTCGGAGCCTCATGTACGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISFCVKSCPVNASRSLMYELAKS*WPRGFC Trigger: ACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTC...GTACATGAGGCTCCGACTGGCATTCACTGGGCAGCTTTTTACACAAAAGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCAAGAGTCCTATCTTAGCCCTGTGAACAGCTCAATGGTAAGGAGACATTTCTTGAGGATTTCATaGACCAGGACGCCCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQESYLSPVNSSMVRRHFLRIS*TRTPPW Trigger: CCAAGGGGGCGTCCTGGTCAATGAAATCCTCAAGAA...ATGTCTCCTTACCATTGAGCTGTTCACAGGGCTAAGATAGGACTCTTGCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
||
| CDS-3UTR CAA 90 bp | GAATGCTTGTGTGTCCAGAGCAGTTTGTCATGCTATAAAGTACATTTTGGCCTTGCCCCACTGGGTGAGTaGGCCAAATCCTTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ECLCVQSSLSCYKVHFGLAPLGE*AKSLWP Trigger: TGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGC...AAGGCCAAAATGTACTTTATAGCATGACAAACTGCTCTGGACACACAAGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS-3UTR CAA 90 bp | GTCATCGAATGGCCTAGGCCAGAACTATTCAGCATGGGAGCCACTAGTGACTCCTCTAAAGTCTCACTCTaGAGTTCTTCAAAACGAGGG | + |
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Preference number: 5 (lower is better) Translates to: VIEWPRPELFSMGATSDSSKVSL*SSSKRG Trigger: CCCTCGTTTTGAAGAACTCAAGAGTGAGACTTTAGA...GGAGTCACTAGTGGCTCCCATGCTGAATAGTTCTGGCCTAGGCCATTCGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS-3UTR CAA 90 bp | AATCTGATCGGTCTAGGCTGGGTATGCAAAGCTTCCCCAGGTGTCCTCCTGTCTGCAAGCTTCATATTCTaGAGGATTTCATTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: NLIGLGWVCKASPGVLLSASFIF*RISLTR Trigger: CCTGGTCAATGAAATCCTCAAGAATATGAAGCTTGC...AGACAGGAGGACACCTGGGGAAGCTTTGCATACCCAGCCTAGACCGATCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| CDS-3UTR CAA 90 bp | GGTTCCAGAATCAAAGCCTTGAACATTGTTTGTTCTCTGAGAGGATTTTGTAGCGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GSRIKALNIVCSLRGFCSELAKS*WPRGFC Trigger: ACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTC...GCTACAAAATCCTCTCAGAGAACAAACAATGTTCAAGGCTTTGATTCTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTTTCAGGACCTCTGTGTAAAAGAGCAGAGGCATCCCTTGCAAGAGTCGCAAGCTTCATATTCTaGAGGATTTCATTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLSGPLCKRAEASLARVASFIF*RISLTR Trigger: CCTGGTCAATGAAATCCTCAAGAATATGAAGCTTGC...GACTCTTGCAAGGGATGCCTCTGCTCTTTTACACAGAGGTCCTGAAAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS TCA 90 bp | AATCCCGACAGCGACGACAAGGTGTCCAGGAAGCTTTTATATGGATaGAGCCTCTTCAAGAATTCCTCAGATTCTAAAGTCTCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NPDSDDKVSRKLLYG*SLFKNSSDSKVSLL Trigger: CAAGAGTGAGACTTTAGAATCTGAGGAATTCTTGAAGAGGCTTCATCCATATAAAAGCTTCCTGGACACCTTGTCGTCGCTGTCGGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS TCA 90 bp | GTGTCGTGTGCGGAATACATGACCAGCTTTTTATACTTCTGTGGCTaGGTTGCAAGCTTCATATTCTTGAGGATTTCATTGACCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: VSCAEYMTSFLYFCG*VASFIFLRISLTRT Trigger: CGTCCTGGTCAATGAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAGCTGGTCATGTATTCCGCACACGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 90 bp | GGTAGTGTCGTGTGCGGAATACATGACCAGCTTTTTATACTTCTGTaGCTGAGTTGCAAGCTTCATATTCTTGAGGATTTCATTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: GSVVCGIHDQLFILL*LSCKLHILEDFIDQ Trigger: CTGGTCAATGAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAGCTGGTCATGTATTCCGCACACGACACTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 72 bp | TCCGTCCTTGGTGGCTGCTTGTGGCCATACACTCCGTaGCCCAGTCCTGGGAGATCACCGGGTCCAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SVLGGCLWPYTP*PSPGRSPGPVA Trigger: AGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGGACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112590.3 |
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| CDS CCA 72 bp | TGGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTaGGAGATCACCGGGTCCAGTAGCTCCGCAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: WLLVAIHSVAQS*EITGSSSSANF Trigger: GAAGTTTGCGGAGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 72 bp | TCAGCACTTGGTGGCTGCTTGTGGCCATACACTCCGTaGCCCAGTCCTGGGAGATCACCGGGTCCAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SALGGCLWPYTP*PSPGRSPGPVA Trigger: AGCTACTGGACCCGGTGATCTCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CAA 90 bp | CCCGGTTACCAGGCAAAATGTAGTGGCAAGGATAACCCTCAGCACTaGGTGGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PGYQAKCSGKDNPQH*VAACGHTLRGPVLG Trigger: TCCCAGGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCTGGTAACCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CCA 72 bp | CAGCAACCGATCCTCAGAGAGAGACACGGTGTGCACTaGGATGGGCTGCCAGAGCAGTCTAGGATTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: QQPILRERHGVH*DGLPEQSRIPD Trigger: ATCTGGAATCCTAGACTGCTCTGGCAGCCCATCCCAGTGCACACCGTGTCTCTCTCTGAGGATCGGTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 ENSMUST00000215852.2 |
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| CDS CAA 72 bp | CTGTTCCATGCCCCACTGGGTGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGTAATGGGGTCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LFHAPLGELAKS*WPRGFCNGVGR Trigger: CCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS TCA 72 bp | GATACACATCTCTCTGCCAGCAGGGCCCATGGCGGATaGGGACAAGCAGAAGTATCACCAGGATCCCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: DTHLSASRAHGG*GQAEVSPGSRL Trigger: TAACCGGGATCCTGGTGATACTTCTGCTTGTCCTCATCCGCCATGGGCCCTGCTGGCAGAGAGATGTGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CCA 72 bp | CAAAATGTAGTGGCAAGGATAACCCTCAGCACTTGGTaGCTGCTTGTGGCCATACACTCCGTGGCCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: QNVVARITLSTW*LLVAIHSVAQS Trigger: GGACTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CCA 72 bp | AGGCAAAATGTAGTGGCAAGGATAACCCTCAGCACTTaGTGGCTGCTTGTGGCCATACACTCCGTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RQNVVARITLST*WLLVAIHSVAQ Trigger: CTGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CAA 72 bp | CAGGCAAAATGTAGTGGCAAGGATAACCCTCAGCACTaGGTGGCTGCTTGTGGCCATACACTCCGTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QAKCSGKDNPQH*VAACGHTLRGP Trigger: TGGGCCACGGAGTGTATGGCCACAAGCAGCCACCAAGTGCTGAGGGTTATCCTTGCCACTACATTTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CAA 90 bp | TTCGTAGTGCTGTTCCATGCCCCACTGGGTGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FVVLFHAPLGELAKS*WPRGFCNGVGRKGL Trigger: GAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAACAGCACTACGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 72 bp | TTCCATGCCCCACTGGGTGAGTTGGCCAAATCCTTGTaGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FHAPLGELAKSL*PRGFCNGVGRK Trigger: TTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 72 bp | ATGTTCCGATACACATCTCTCTGCCAGCAGGGCCCATaGCGGATGAGGACAAGCAGAAGTATCACCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: MFRYTSLCQQGP*RMRTSRSITRI Trigger: GATCCTGGTGATACTTCTGCTTGTCCTCATCCGCCATGGGCCCTGCTGGCAGAGAGATGTGTATCGGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062723.14 |
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| CDS CAA 72 bp | GCTCCGGATATAAATCTGGGTGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGTAATGGGGTCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: APDINLGELAKS*WPRGFCNGVGR Trigger: CCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS CAA 90 bp | ATAACTTCCAAGTTCGTAGTGCTGTTCCATGCCCCACTGGGTGAGTaGGCCAAATCCTTGTGGCCACGAGGATTCTGTAATGGGGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: ITSKFVVLFHAPLGE*AKSLWPRGFCNGVG Trigger: ACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAACAGCACTACGAACTTGGAAGTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CAA 90 bp | CACATCTGTGCTCCGGATATAAATCTGGGTGAGTTGGCCAAATCCTaGTGGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HICAPDINLGELAKS*WPRGFCNGVGRKGL Trigger: GAGACCTTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGCACAGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS CAA 90 bp | CAAAGTCCTGTCCACATCTGTGCTCCGGATATAAATCTGGGTGAGTaGGCCAAATCCTTGTGGCCACGAGGATTCTGTAATGGGGTCGGT | + |
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Preference number: 6 (lower is better) Translates to: QSPVHICAPDINLGE*AKSLWPRGFCNGVG Trigger: ACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGCACAGATGTGGACAGGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS TCA 72 bp | TCCTGTCCACATCTGTGCTCCGGATATAAATCTGGGTaGGTTGGCCAAATCCTTGTGGCCACGAGGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCPHLCSGYKSG*VGQILVATRIL Trigger: CAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGCACAGATGTGGACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS CAA 72 bp | AAGTTCGTAGTGCTGTTCCATGCCCCACTGGGTGAGTaGGCCAAATCCTTGTGGCCACGAGGATTCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: KFVVLFHAPLGE*AKSLWPRGFCN Trigger: ATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGTGGGGCATGGAACAGCACTACGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS CCA 72 bp | CCGGATATAAATCTGGGTGAGTTGGCCAAATCCTTGTaGCCACGAGGATTCTGTAATGGGGTCGGTAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PDINLGELAKSL*PRGFCNGVGRK Trigger: TTTCCTACCGACCCCATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS CAA 72 bp | GTCCACATCTGTGCTCCGGATATAAATCTGGGTGAGTaGGCCAAATCCTTGTGGCCACGAGGATTCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: VHICAPDINLGE*AKSLWPRGFCN Trigger: ATTACAGAATCCTCGTGGCCACAAGGATTTGGCCAACTCACCCAGATTTATATCCGGAGCACAGATGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215852.2 |
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| CDS CCA 72 bp | GTGTGCGGAATACATGACCAGCTTTTTATACTTCTGTaGCTGAGTTGCAAGCTTCATATTCTTGAGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: VCGIHDQLFILL*LSCKLHILEDF Trigger: GAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAGCTGGTCATGTATTCCGCACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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| CDS TCA 72 bp | GCGGAATACATGACCAGCTTTTTATACTTCTGTGGCTaGGTTGCAAGCTTCATATTCTTGAGGATTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: AEYMTSFLYFCG*VASFIFLRISL Trigger: CAATGAAATCCTCAAGAATATGAAGCTTGCAACTCAGCCACAGAAGTATAAAAAGCTGGTCATGTATTCCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062723.14 ENSMUST00000112590.3 |
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