Pregenerated sensors for ACP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012777Ensembl transcript IDs: ENSMUST00000012921.9, ENSMUST00000107945.8, ENSMUST00000118216.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTGGAGCTCCCCCGGAATTCAAAGGCCATGCAGGCAGCGTAAGGTaGGGTGTTCCCATCGTAGAGGCCCAGGGCCCCCTGGAGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PGAPPEFKGHAGSVR*GVPIVEAQGPLEGQ Trigger: CTGGCCCTCCAGGGGGCCCTGGGCCTCTACGATGGGAACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGGGGGAGCTCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS TCA 90 bp | CTTTCCATGCTCTCCGGAGTGGCTCTCCAACCAGGGACAGCCCAGTaGAGTTGCCCAGGCGGGTCAGGAAGTCCGTCCAGCCCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LSMLSGVALQPGTAQ*SCPGGSGSPSSPPG Trigger: CCCTGGAGGGCTGGACGGACTTCCTGACCCGCCTGGGCAACTTCACTGGGCTGTCCCTGGTTGGAGAGCCACTCCGGAGAGCATGGAAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS GCA 90 bp | CTTCCTCCTCGGGTTCCCTGGAGCTCCCCCGGAATTCAAAGGCCATaGAGGCAGCGTAAGGTGGGGTGTTCCCATCGTAGAGGCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LPPRVPWSSPGIQRP*RQRKVGCSHRRGPG Trigger: CCCTGGGCCTCTACGATGGGAACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGGGGGAGCTCCAGGGAACCCGAGGAGGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | AATCGGCCCAGTTCTAGCTGCTGGCGGATCCCCTCCTTAGTCAGTTaGCCCAAGCCTCGAGGCCACAAGGTGGAGGCAGCTTCCTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: NRPSSSCWRIPSLVS*PKPRGHKVEAASLC Trigger: ACACAAGGAAGCTGCCTCCACCTTGTGGCCTCGAGGCTTGGGCCAACTGACTAAGGAGGGGATCCGCCAGCAGCTAGAACTGGGCCGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | GGGGAACCTCAGCAACTTGTCCTCAGACACAGGCACTGTGTGCACTaGAATGGGCTTCCAGTCAGTCTCAGGACTTCCAGGGGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GEPQQLVLRHRHCVH*NGLPVSLRTSRGSL Trigger: GAGGCTGCCCCTGGAAGTCCTGAGACTGACTGGAAGCCCATTCCAGTGCACACAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | ACGCTGGCAGATCAAGGTATCCAGAACTTTCCATGCTCTCCGGAGTaGCTCTCCAACCAGGGACAGCCCAGTGAAGTTGCCCAGGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: TLADQGIQNFPCSPE*LSNQGQPSEVAQAG Trigger: ACCCGCCTGGGCAACTTCACTGGGCTGTCCCTGGTTGGAGAGCCACTCCGGAGAGCATGGAAAGTTCTGGATACCTTGATCTGCCAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | ACCTCAGCAACTTGTCCTCAGACACAGGCACTGTGTGCACTGGAATaGGCTTCCAGTCAGTCTCAGGACTTCCAGGGGCAGCCTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: TSATCPQTQALCALE*ASSQSQDFQGQPQG Trigger: TCCCTGAGGCTGCCCCTGGAAGTCCTGAGACTGACTGGAAGCCCATTCCAGTGCACACAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | ATGCCCTTCCCTTTTGAAGCACCTTCCAGCCGGGTCTGGTCTCCCTaGCTGCACAGATGGCCCCTGGCCAATGCAGATCTGGATTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: MPFPFEAPSSRVWSP*LHRWPLANADLDLV Trigger: CACTAAATCCAGATCTGCATTGGCCAGGGGCCATCTGTGCAGCCAGGGAGACCAGACCCGGCTGGAAGGTGCTTCAAAAGGGAAGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS TCA 90 bp | TCGGGGTGGGCCTACATGGGCCCTGATATCCAGAGCAGAAATCTGTaGCAGAGTCCTCAAGACATCTGGAGAGGCCCAGGATGGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGWAYMGPDIQSRNL*QSPQDIWRGPGWKV Trigger: GACCTTCCATCCTGGGCCTCTCCAGATGTCTTGAGGACTCTGTCACAGATTTCTGCTCTGGATATCAGGGCCCATGTAGGCCCACCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS GCA 90 bp | CTGCCTCTGTGGACTCTCGTAACAGCTCATGGTATCGAGGACAGCTaGGCATGGGGAACCTCAGCAACTTGTCCTCAGACACAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: LPLWTLVTAHGIEDS*AWGTSATCPQTQAL Trigger: CAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATACCATGAGCTGTTACGAGAGTCCACAGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | ACATCTGGAGAGGCCCAGGATGGAAGGTCAAGACCATGGGCACGCTaGCAGATCAAGGTATCCAGAACTTTCCATGCTCTCCGGAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: TSGEAQDGRSRPWAR*QIKVSRTFHALRSG Trigger: GCCACTCCGGAGAGCATGGAAAGTTCTGGATACCTTGATCTGCCAGCGTGCCCATGGTCTTGACCTTCCATCCTGGGCCTCTCCAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS TCA 90 bp | TCAGCTGGGCCTTTTCTGCTGCTCGGGGTGGGCCTACATGGGCCCTaGTATCCAGAGCAGAAATCTGTGACAGAGTCCTCAAGACATCTG | + |
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Preference number: 5 (lower is better) Translates to: SAGPFLLLGVGLHGP*YPEQKSVTESSRHL Trigger: CAGATGTCTTGAGGACTCTGTCACAGATTTCTGCTCTGGATATCAGGGCCCATGTAGGCCCACCCCGAGCAGCAGAAAAGGCCCAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 90 bp | CTGTGGACTCTCGTAACAGCTCATGGTATCGAGGACAGCTGCGCATaGGGAACCTCAGCAACTTGTCCTCAGACACAGGCACTGTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LWTLVTAHGIEDSCA*GTSATCPQTQALCA Trigger: TGCACACAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATACCATGAGCTGTTACGAGAGTCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | CCCCCGGAATTCAAAGGCCATGCAGGCAGCGTAAGGTaGGGTGTTCCCATCGTAGAGGCCCAGGGCCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PPEFKGHAGSVR*GVPIVEAQGPL Trigger: CAGGGGGCCCTGGGCCTCTACGATGGGAACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | AGCTTCCTTGTGTGGATCTGTGGGGTAGGAGGCCAGTaGGGCCCGGTCGCCATGTCGGAACACCAGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFLVWICGVGGQ*GPVAMSEHQSH Trigger: GTGGCTCTGGTGTTCCGACATGGCGACCGGGCCCCACTGGCCTCCTACCCCACAGATCCACACAAGGAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CAA 72 bp | CCAGAGCAGGTGAGGCACAGGCGCACTTGCCCACCTTaGGCCTGTTTCCAGAGGATACTCCAGCGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PEQVRHRRTCPP*ACFQRILQRSG Trigger: CCCAGACCGCTGGAGTATCCTCTGGAAACAGGCCAAAGGTGGGCAAGTGCGCCTGTGCCTCACCTGCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS GCA 72 bp | CGGGTTCCCTGGAGCTCCCCCGGAATTCAAAGGCCATaGAGGCAGCGTAAGGTGGGGTGTTCCCATCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RVPWSSPGIQRP*RQRKVGCSHRR Trigger: TCTACGATGGGAACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGGGGGAGCTCCAGGGAACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS GCA 72 bp | CTGGTCTCCCTGGCTGCACAGATGGCCCCTGGCCAATaGAGATCTGGATTTAGTGGAGGGGTGAGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVSLAAQMAPGQ*RSGFSGGVRWA Trigger: TGCCCACCTCACCCCTCCACTAAATCCAGATCTGCATTGGCCAGGGGCCATCTGTGCAGCCAGGGAGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS CCA 72 bp | AGTTCTAGCTGCTGGCGGATCCCCTCCTTAGTCAGTTaGCCCAAGCCTCGAGGCCACAAGGTGGAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSCWRIPSLVS*PKPRGHKVEAA Trigger: AGCTGCCTCCACCTTGTGGCCTCGAGGCTTGGGCCAACTGACTAAGGAGGGGATCCGCCAGCAGCTAGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | CCTTCCAGCCGGGTCTGGTCTCCCTGGCTGCACAGATaGCCCCTGGCCAATGCAGATCTGGATTTAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PSSRVWSPWLHR*PLANADLDLVE Trigger: CTCCACTAAATCCAGATCTGCATTGGCCAGGGGCCATCTGTGCAGCCAGGGAGACCAGACCCGGCTGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS CCA 72 bp | ATGCCCTTCCCTTTTGAAGCACCTTCCAGCCGGGTCTaGTCTCCCTGGCTGCACAGATGGCCCCTGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: MPFPFEAPSSRV*SPWLHRWPLAN Trigger: ATTGGCCAGGGGCCATCTGTGCAGCCAGGGAGACCAGACCCGGCTGGAAGGTGCTTCAAAAGGGAAGGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS TCA 72 bp | GGTAGAATCTGGGTGATGAGCTGGGTCCAGAGCAGGTaGGGCACAGGCGCACTTGCCCACCTTTGGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GRIWVMSWVQSR*GTGALAHLWPV Trigger: AACAGGCCAAAGGTGGGCAAGTGCGCCTGTGCCTCACCTGCTCTGGACCCAGCTCATCACCCAGATTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS GCA 72 bp | TTGAAGCACCTTCCAGCCGGGTCTGGTCTCCCTGGCTaGACAGATGGCCCCTGGCCAATGCAGATCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: LKHLPAGSGLPG*TDGPWPMQIWI Trigger: AATCCAGATCTGCATTGGCCAGGGGCCATCTGTGCAGCCAGGGAGACCAGACCCGGCTGGAAGGTGCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS CCA 72 bp | ACTTGTCCTCAGACACAGGCACTGTGTGCACTGGAATaGGCTTCCAGTCAGTCTCAGGACTTCCAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TCPQTQALCALE*ASSQSQDFQGQ Trigger: CTGCCCCTGGAAGTCCTGAGACTGACTGGAAGCCCATTCCAGTGCACACAGTGCCTGTGTCTGAGGACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | CTCGTAACAGCTCATGGTATCGAGGACAGCTGCGCATaGGGAACCTCAGCAACTTGTCCTCAGACACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVTAHGIEDSCA*GTSATCPQTQA Trigger: TGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATACCATGAGCTGTTACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | GAGTACATGACCATCTTGAGGGGCAACCCAAGGCGCTaGGTCCGGGAGAAATTGCTGAGAATAGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: EYMTILRGNPRR*VREKLLRIASS Trigger: GCTGGATGCTATTCTCAGCAATTTCTCCCGGACCCAGCGCCTTGGGTTGCCCCTCAAGATGGTCATGTACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CCA 72 bp | GAGGCCCAGGATGGAAGGTCAAGACCATGGGCACGCTaGCAGATCAAGGTATCCAGAACTTTCCATGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: EAQDGRSRPWAR*QIKVSRTFHAL Trigger: GAGAGCATGGAAAGTTCTGGATACCTTGATCTGCCAGCGTGCCCATGGTCTTGACCTTCCATCCTGGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS CAA 72 bp | TATCGAGGACAGCTGCGCATGGGGAACCTCAGCAACTaGTCCTCAGACACAGGCACTGTGTGCACTGGAATG | + |
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Preference number: 6 (lower is better) Translates to: YRGQLRMGNLSN*SSDTGTVCTGM Trigger: CATTCCAGTGCACACAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS TCA 72 bp | GGGGTGAGGTGGGCAGCCCTGGAACTTCTGCCTTCGTaGGTTTCTATTAAATGGCTGGTTCATTGCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GVRWAALELLPS*VSIKWLVHCPL Trigger: CAGAGGGCAATGAACCAGCCATTTAATAGAAACTCACGAAGGCAGAAGTTCCAGGGCTGCCCACCTCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107945.8 |
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| CDS GCA 72 bp | CTTGTGCACTCTCCAATGTCCGGTCAAAGTCTGTGCTaGGGATGTACACCTCTTCTCGCTTGTACTCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVHSPMSGQSLC*GCTPLLACTQG Trigger: GCCCTGAGTACAAGCGAGAAGAGGTGTACATCCGCAGCACAGACTTTGACCGGACATTGGAGAGTGCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS GCA 72 bp | TGGACTCTCGTAACAGCTCATGGTATCGAGGACAGCTaGGCATGGGGAACCTCAGCAACTTGTCCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: WTLVTAHGIEDS*AWGTSATCPQT Trigger: TGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATACCATGAGCTGTTACGAGAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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| CDS GCA 72 bp | TGGCTTGTGCACTCTCCAATGTCCGGTCAAAGTCTGTaGTGCGGATGTACACCTCTTCTCGCTTGTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: WLVHSPMSGQSL*CGCTPLLACTQ Trigger: CTGAGTACAAGCGAGAAGAGGTGTACATCCGCAGCACAGACTTTGACCGGACATTGGAGAGTGCACAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012921.9 ENSMUST00000107945.8 ENSMUST00000118216.8 |
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