Pregenerated sensors for ACP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044573Ensembl transcript IDs: ENSMUST00000062740.15, ENSMUST00000074038.7, ENSMUST00000219697.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACGAGAGCCTAGAGAAGAGAGTACACGGCAAGCAAACGGCACACTaGGTGCGGGTCATGCACACACTCCACTTAGACCAGACGACCCAG | + |
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Preference number: 1 (lower is better) Translates to: NESLEKRVHGKQTAH*VRVMHTLHLDQTTQ Trigger: CTGGGTCGTCTGGTCTAAGTGGAGTGTGTGCATGACCCGCACCCAGTGTGCCGTTTGCTTGCCGTGTACTCTCTTCTCTAGGCTCTCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR CCA 90 bp | AGAGAGGAGCCCTGGCCAAGAAGAGACTGCATATTCCTAGGCCCCTaGGCTTCCTTCCTTTCAGACGTCAGGATGGCTCTTCTAACTACA | + |
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Preference number: 1 (lower is better) Translates to: REEPWPRRDCIFLGP*ASFLSDVRMALLTT Trigger: TGTAGTTAGAAGAGCCATCCTGACGTCTGAAAGGAAGGAAGCCCAGGGGCCTAGGAATATGCAGTCTCTTCTTGGCCAGGGCTCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGCAGCCCAGGACGGCCTaGTGGAGTCCCAGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWQPRTA*WSPRPI Trigger: GATGGGCCTGGGACTCCAGCAGGCCGTCCTGGGCTG...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | AGGCTAAGACAGACAGTTACCACCTTTTCAGCTGGGAAGCGGGTAGGGAGCACCCAGCCCAGGACGGCCTaGTGGAGTCCCAGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: RLRQTVTTFSAGKRVGSTQPRTA*WSPRPI Trigger: GATGGGCCTGGGACTCCAGCAGGCCGTCCTGGGCTG...GGTGCTCCCTACCCGCTTCCCAGCTGAAAAGGTGGTAACTGTCTGTCTTAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGCCCAGGACGGCCTGCTaGAGTCCCAGGCCCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWPRTAC*SPRPIS Trigger: GCTGATGGGCCTGGGACTCCAGCAGGCCGTCCTGGG...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | AGGCTAAGACAGACAGTTACCACCTTTTCAGCTGGGAAGCGGGTAGGGAGCACCTATGGGGCTAAGGACTaGCACCACCCTTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: RLRQTVTTFSAGKRVGSTYGAKD*HHPWAQ Trigger: CTGTGCCCAAGGGTGGTGGCAGTCCTTAGCCCCATA...GGTGCTCCCTACCCGCTTCCCAGCTGAAAAGGTGGTAACTGTCTGTCTTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGGGAGCACCAGCTACATaGAGAAGGCCCAAGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWGAPAT*RRPKDK Trigger: CTTATCCTTGGGCCTTCTTCATGTAGCTGGTGCTCC...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGTCTAACTACAAGTTCTaGGTGACTGGAGCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWSNYKF*VTGAHQ Trigger: CTGGTGAGCTCCAGTCACGCAGAACTTGTAGTTAGA...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGGTAACTTTATCCATCTaGTGCTCCCATCCGTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWVTLSI*CSHPLL Trigger: TAACAACGGATGGGAGCAGCAGATGGATAAAGTTAC...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGCTGGGAAGCAGGCAGACACTaGATTTGTATCTCAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LKCLPLLGHHGLSVRGCWEAGRH*ICISVV Trigger: TACAACTGAGATACAAATCCAGTGTCTGCCTGCTTC...CCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR TCA 90 bp | ATCAGTGTATCTGTCAGTGAGATTTGCCACTCTTATGATTGTAAAAACAGACAACACAGCACTGATGAGTaGGCTGCTCAATGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ISVSVSEICHSYDCKNRQHSTDE*AAQWWG Trigger: GCCCCACCATTGAGCAGCTCACTCATCAGTGCTGTG...TTGTCTGTTTTTACAATCATAAGAGTGGCAAATCTCACTGACAGATACACTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| 3UTR-3UTR CCA 90 bp | CACCCATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTGAAGCAGGCAGACACTaGATTTGTATCTCAGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: HPSPSNTALCVSISSLYFEAGRH*ICISVV Trigger: TACAACTGAGATACAAATCCAGTGTCTGCCTGCTTC...AAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGATGGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTGTATCTGTCAGTGAGATTTGCCACTCTTATGATTGTAAAAACAGACAATCCATTTCCTCCTTGTaGCTGACTACCTGTCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ISVSVSEICHSYDCKNRQSISSL*LTTCPL Trigger: GAGAGGACAGGTAGTCAGCCACAAGGAGGAAATGGA...TTGTCTGTTTTTACAATCATAAGAGTGGCAAATCTCACTGACAGATACACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| 3UTR CAA 90 bp | CAAATAAAAAGGCACATGGAGGCAACATTTAGGTATCTTGTTCACTaGTCAGTAAGAAGCAGGCAGACACTGGATTTGTATCTCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: QIKRHMEATFRYLVH*SVRSRQTLDLYLSC Trigger: ACAACTGAGATACAAATCCAGTGTCTGCCTGCTTCTTACTGACAAGTGAACAAGATACCTAAATGTTGCCTCCATGTGCCTTTTTATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR CAA 90 bp | GTCAGTAAGAAGCAGGCAGACACTGGATTTGTATCTCAGTTGTATTaGATAACTTCCCAGTTGAATTCATGTTCCTTTCTGACATACATT | + |
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Preference number: 2 (lower is better) Translates to: VSKKQADTGFVSQLY*ITSQLNSCSFLTYI Trigger: AATGTATGTCAGAAAGGAACATGAATTCAACTGGGAAGTTATCAAATACAACTGAGATACAAATCCAGTGTCTGCCTGCTTCTTACTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | AACAAGAACAAAGCTCAGGAAAGTAGACAAAAACCAAGTAAGACTGAAGATGGTACTTTATCCATCTGCTaGTCCCATCCGTTGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: NKNKAQESRQKPSKTEDGTLSIC*SHPLLF Trigger: AAATAACAACGGATGGGAGCAGCAGATGGATAAAGT...ACCATCTTCAGTCTTACTTGGTTTTTGTCTACTTTCCTGAGCTTTGTTCTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTGTATCTGTCAGTGAGATTTGCCACTCTTATGATTGTAAAAACAGACAAACTTTATCCATCTGCTaGTCCCATCCGTTGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: ISVSVSEICHSYDCKNRQTLSIC*SHPLLF Trigger: AAATAACAACGGATGGGAGCAGCAGATGGATAAAGT...TTGTCTGTTTTTACAATCATAAGAGTGGCAAATCTCACTGACAGATACACTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| 3UTR GCA 72 bp | TTTAGACAGGGTGTCACTGTCCAGCCCAGGACGGCCTaGTGGAGTCCCAGGCCCATCAGCACATCCAGCGTC | + |
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Preference number: 3 (lower is better) Translates to: FRQGVTVQPRTA*WSPRPISTSSV Trigger: GACGCTGGATGTGCTGATGGGCCTGGGACTCCAGCAGGCCGTCCTGGGCTGGACAGTGACACCCTGTCTAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR CCA 72 bp | CTAGAGAAGAGAGTACACGGCAAGCAAACGGCACACTaGGTGCGGGTCATGCACACACTCCACTTAGACCAG | + |
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Preference number: 3 (lower is better) Translates to: LEKRVHGKQTAH*VRVMHTLHLDQ Trigger: CTGGTCTAAGTGGAGTGTGTGCATGACCCGCACCCAGTGTGCCGTTTGCTTGCCGTGTACTCTCTTCTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR CCA 72 bp | TCAGGTGTAAGCTTTCCTCCTTCGAGAGAGGAGCCCTaGCCAAGAAGAGACTGCATATTCCTAGGCCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGVSFPPSREEP*PRRDCIFLGPW Trigger: CCAGGGGCCTAGGAATATGCAGTCTCTTCTTGGCCAGGGCTCCTCTCTCGAAGGAGGAAAGCTTACACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR TCA 72 bp | AGTGTCTGCCTTTGCTGGGACATCATGGCCTTTCTGTaGGAGGGTGCTGGGATAGCTGCTTTCTTCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SVCLCWDIMAFL*EGAGIAAFFWK Trigger: CTTCCAGAAGAAAGCAGCTATCCCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR GCA 72 bp | CCTTTGCTGGGACATCATGGCCTTTCTGTGAGAGGGTaGTGGGATAGCTGCTTTCTTCTGGAAGAGTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PLLGHHGLSVRG*WDSCFLLEESG Trigger: ACCTGACTCTTCCAGAAGAAAGCAGCTATCCCAGCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR TCA 72 bp | GTGCTGTTTGAGACAGCCGTAGAACAAAGCAGAACCTaGCATTCCAAGGATCTGCGTGTAAGATACACAGGT | + |
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Preference number: 3 (lower is better) Translates to: VLFETAVEQSRT*HSKDLRVRYTG Trigger: ACCTGTGTATCTTACACGCAGATCCTTGGAATGTCAGGTTCTGCTTTGTTCTACGGCTGTCTCAAACAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR CAA 90 bp | CACCCATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTTGCTGCTCCCATCCGTaGTTATTTTTGTTCCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: HPSPSNTALCVSISSLYFCCSHP*LFLFPF Trigger: AAAGGGGAACAAAAATAACAACGGATGGGAGCAGCA...AAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGATGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTGTATCTGTCAGTGAGATTTGCCACTCTTATGATTGTAAAAACAGACAATGCTGCTCCCATCCGTaGTTATTTTTGTTCCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: ISVSVSEICHSYDCKNRQCCSHP*LFLFPF Trigger: AAAGGGGAACAAAAATAACAACGGATGGGAGCAGCA...TTGTCTGTTTTTACAATCATAAGAGTGGCAAATCTCACTGACAGATACACTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| 3UTR-3UTR CAA 90 bp | ATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTCTAACGGATTTGTATCTCAGTaGTATTTGATAACTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IAIQHSIVCIHLITLLSNGFVSQ*YLITSQ Trigger: CTGGGAAGTTATCAAATACAACTGAGATACAAATCC...GTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR TCA 72 bp | TTCTATGTTGCTGACAGTTTACAAATATGCATTCAGTaGATCAGTGTATCTGTCAGTGAGATTTGCCACTCT | + |
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Preference number: 3 (lower is better) Translates to: FYVADSLQICIQ*ISVSVSEICHS Trigger: AGAGTGGCAAATCTCACTGACAGATACACTGATTCACTGAATGCATATTTGTAAACTGTCAGCAACATAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| 3UTR CAA 72 bp | CACAGGAGCCCAAAAAGGCAGCTGAAGTGTCTGCCTTaGCTGGGACATCATGGCCTTTCTGTGAGAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HRSPKRQLKCLP*LGHHGLSVRGC Trigger: GCACCCTCTCACAGAAAGGCCATGATGTCCCAGCAAAGGCAGACACTTCAGCTGCCTTTTTGGGCTCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR CCA 90 bp | CACCCATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTGACAGCTCTTGGGTCTaGGGGCCGGCCCACGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HPSPSNTALCVSISSLYFDSSWV*GPAHVP Trigger: TGGAACGTGGGCCGGCCCCCAGACCCAAGAGCTGTC...AAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGATGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| CDS-3UTR GCA 90 bp | GAGAGGTGGGGTATGGGGCTAAGGACTGCCACCACCCTTGGGCACAGCACTGATCGAAGTCAGAGTCATTaGCATAATAGGGATCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ERWGMGLRTATTLGHSTDRSQSH*HNRDLQ Trigger: TTGAAGATCCCTATTATGGCAATGACTCTGACTTCG...ATCAGTGCTGTGCCCAAGGGTGGTGGCAGTCCTTAGCCCCATACCCCACCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR GCA 90 bp | CATCAGCACATCCAGCGTCTCCTCTCTCAAATCCCTCAACACCCTCAGTGTGTCTGTGCTGCATGTGGATaGCATGTTTTCTCATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HQHIQRLLSQIPQHPQCVCAACG*HVFSCS Trigger: ACTGCATGAGAAAACATGGCATCCACATGCAGCACA...GACACACTGAGGGTGTTGAGGGATTTGAGAGAGGAGACGCTGGATGTGCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| CDS-3UTR TCA 90 bp | ATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTCTAACGATTTCTTAGGCAGCTaGCAGCTCTTGGGTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: IAIQHSIVCIHLITLLSNDFLGS*QLLGLG Trigger: CCCCAGACCCAAGAGCTGTCAGCTGCCTAAGAAATC...GTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| CDS-3UTR GCA 90 bp | CACCCATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTATCTGCCGTGCAATGTaGTGCATGTGGATGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: HPSPSNTALCVSISSLYFICRAM*CMWMPC Trigger: ACATGGCATCCACATGCAGCACATTGCACGGCAGAT...AAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGATGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| CDS-3UTR GCA 90 bp | CTGTTTTGTAATCACCGCAAGGTCAGAGGTTTAGTTAGTCTAAGAATGCTTAGCAGTCGGAAACGGCGCTaGTGTCAATGGCCCAATTAT | + |
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Preference number: 4 (lower is better) Translates to: LFCNHRKVRGLVSLRMLSSRKRR*CQWPNY Trigger: ATAATTGGGCCATTGACAGCAGCGCCGTTTCCGACT...GCTAAGCATTCTTAGACTAACTAAACCTCTGACCTTGCGGTGATTACAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| 3UTR CAA 72 bp | AGGCACATGGAGGCAACATTTAGGTATCTTGTTCACTaGTCAGTAAGAAGCAGGCAGACACTGGATTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: RHMEATFRYLVH*SVRSRQTLDLY Trigger: ATACAAATCCAGTGTCTGCCTGCTTCTTACTGACAAGTGAACAAGATACCTAAATGTTGCCTCCATGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| 3UTR CAA 72 bp | CTCTCAATTAGACACCCATCGCCATCCAACACAGCATaGTGTGTATCCATCTCATCACTTTACTTTCTAACA | + |
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Preference number: 4 (lower is better) Translates to: LSIRHPSPSNTA*CVSISSLYFLT Trigger: TGTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGATGGGTGTCTAATTGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR GCA 90 bp | ATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTCTAACCGAAGTCAGAGTCATTaGCATAATAGGGATCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: IAIQHSIVCIHLITLLSNRSQSH*HNRDLQ Trigger: TTGAAGATCCCTATTATGGCAATGACTCTGACTTCG...GTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR GCA 90 bp | ATCAGTGTATCTGTCAGTGAGATTTGCCACTCTTATGATTGTAAAAACAGACAATGCCATGTTTTCTCATaGAGTTCTGCCCTCGATAGT | + |
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Preference number: 4 (lower is better) Translates to: ISVSVSEICHSYDCKNRQCHVFS*SSALDS Trigger: ACTATCGAGGGCAGAACTGCATGAGAAAACATGGCA...TTGTCTGTTTTTACAATCATAAGAGTGGCAAATCTCACTGACAGATACACTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| CDS-3UTR CAA 90 bp | TGGGTGCGGGTCATGCACACACTCCACTTAGACCAGACGACCCAGGCTTGCCGAGCAGCACCTAAGGCATaGCTGGTACACCACCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: WVRVMHTLHLDQTTQACRAAPKA*LVHHLE Trigger: TTCGAGGTGGTGTACCAGCAATGCCTTAGGTGCTGC...TCGGCAAGCCTGGGTCGTCTGGTCTAAGTGGAGTGTGTGCATGACCCGCACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR CAA 90 bp | GAGAGGTGGGGTATGGGGCTAAGGACTGCCACCACCCTTGGGCACAGCACTGATTTCTCCAGGAAGGCCTaGCAGCACCTAAGGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: ERWGMGLRTATTLGHSTDFSRKA*QHLRHC Trigger: GCAATGCCTTAGGTGCTGCAAGGCCTTCCTGGAGAA...ATCAGTGCTGTGCCCAAGGGTGGTGGCAGTCCTTAGCCCCATACCCCACCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS GCA 90 bp | CTCTTGGGTCTGGGGGCCGGCCCACGTTCCAGTCGGAAACGGCGCTaGTGTCAATGGCCCACTGTAACACAAAACATATGTCAAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LLGLGAGPRSSRKRR*CQWPTVTQNICQAP Trigger: TGGAGCTTGACATATGTTTTGTGTTACAGTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCCGGCCCCCAGACCCAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS CCA 90 bp | CTGGGGGCCGGCCCACGTTCCAGTCGGAAACGGCGCTGCTGTCAATaGCCCACTGTAACACAAAACATATGTCAAGCTCCAGTACGGTAC | + |
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Preference number: 5 (lower is better) Translates to: LGAGPRSSRKRRCCQ*PTVTQNICQAPVRY Trigger: GTACCGTACTGGAGCTTGACATATGTTTTGTGTTACAGTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCCGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 90 bp | CTCTTGGGTCTGGGGGCCGGCCCACGTTCCAGTCGGAAACGGCGCTaGTGTCAATGGCCCAATTATCTGAAACCTTTTCATCAGTTACCA | + |
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Preference number: 5 (lower is better) Translates to: LLGLGAGPRSSRKRR*CQWPNYLKPFHQLP Trigger: TGGTAACTGATGAAAAGGTTTCAGATAATTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCCGGCCCCCAGACCCAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| CDS GCA 90 bp | GTACCTGCCGTGCAATGTGCTGCATGTGGATGCCATGTTTTCTCATaGAGTTCTGCCCTCGATAGTCAGGAGGGTTCCCCACTTCATAGG | + |
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Preference number: 5 (lower is better) Translates to: VPAVQCAACGCHVFS*SSALDSQEGSPLHR Trigger: CCTATGAAGTGGGGAACCCTCCTGACTATCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 90 bp | TCAAGCTCCAGTACGGTACCTGCCGTGCAATGTGCTGCATGTGGATaGCATGTTTTCTCATGCAGTTCTGCCCTCGATAGTCAGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSSSTVPAVQCAACG*HVFSCSSALDSQEG Trigger: ACCCTCCTGACTATCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTACCGTACTGGAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 90 bp | CACAAAACATATGTCAAGCTCCAGTACGGTACCTGCCGTGCAATGTaGTGCATGTGGATGCCATGTTTTCTCATGCAGTTCTGCCCTCGA | + |
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Preference number: 5 (lower is better) Translates to: HKTYVKLQYGTCRAM*CMWMPCFLMQFCPR Trigger: TCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTACCGTACTGGAGCTTGACATATGTTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 90 bp | ACTGTAACACAAAACATATGTCAAGCTCCAGTACGGTACCTGCCGTaGAATGTGCTGCATGTGGATGCCATGTTTTCTCATGCAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TVTQNICQAPVRYLP*NVLHVDAMFSHAVL Trigger: CAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTACCGTACTGGAGCTTGACATATGTTTTGTGTTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS-3UTR CAA 90 bp | ATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTCTAACGCAGCACCTAAGGCATaGCTGGTACACCACCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: IAIQHSIVCIHLITLLSNAAPKA*LVHHLE Trigger: TTCGAGGTGGTGTACCAGCAATGCCTTAGGTGCTGC...GTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS-3UTR CAA 90 bp | ATCGCCATCCAACACAGCATTGTGTGTATCCATCTCATCACTTTACTTTCTAACTTCTCCAGGAAGGCCTaGCAGCACCTAAGGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: IAIQHSIVCIHLITLLSNFSRKA*QHLRHC Trigger: GCAATGCCTTAGGTGCTGCAAGGCCTTCCTGGAGAA...GTTAGAAAGTAAAGTGATGAGATGGATACACACAATGCTGTGTTGGATGGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000074038.7 |
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| CDS GCA 72 bp | CTGGGGGCCGGCCCACGTTCCAGTCGGAAACGGCGCTaGTGTCAATGGCCCACTGTAACACAAAACATATGT | + |
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Preference number: 6 (lower is better) Translates to: LGAGPRSSRKRR*CQWPTVTQNIC Trigger: ACATATGTTTTGTGTTACAGTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCCGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 72 bp | CTGGGGGCCGGCCCACGTTCCAGTCGGAAACGGCGCTaGTGTCAATGGCCCAATTATCTGAAACCTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LGAGPRSSRKRR*CQWPNYLKPFH Trigger: ATGAAAAGGTTTCAGATAATTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCCGGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| CDS CCA 72 bp | CTCCAGTACGGTACCTGCCGTGCAATGTGCTGCATGTaGATGCCATGTTTTCTCATGCAGTTCTGCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LQYGTCRAMCCM*MPCFLMQFCPR Trigger: TCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTACCGTACTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS GCA 72 bp | GTGCAATGTGCTGCATGTGGATGCCATGTTTTCTCATaGAGTTCTGCCCTCGATAGTCAGGAGGGTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: VQCAACGCHVFS*SSALDSQEGSP Trigger: TGGGGAACCCTCCTGACTATCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062740.15 ENSMUST00000219697.2 |
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| CDS GCA 72 bp | GTCAAGCTCCAGTACGGTACCTGCCGTGCAATGTGCTaGATGTGGATGCCATGTTTTCTCATGCAGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VKLQYGTCRAMC*MWMPCFLMQFC Trigger: GCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGGTACCGTACTGGAGCTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219697.2 |
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| CDS CCA 72 bp | GGCCCACGTTCCAGTCGGAAACGGCGCTGCTGTCAATaGCCCAATTATCTGAAACCTTTTCATCAGTTACCA | + |
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Preference number: 6 (lower is better) Translates to: GPRSSRKRRCCQ*PNYLKPFHQLP Trigger: TGGTAACTGATGAAAAGGTTTCAGATAATTGGGCCATTGACAGCAGCGCCGTTTCCGACTGGAACGTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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| CDS CCA 72 bp | TCTTCTTTTGTAATCTGCCGTGCAATGTGCTGCATGTaGATGCCATGTTTTCTCATGCAGTTCTGCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SSFVICRAMCCM*MPCFLMQFCPR Trigger: TCGAGGGCAGAACTGCATGAGAAAACATGGCATCCACATGCAGCACATTGCACGGCAGATTACAAAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062740.15 |
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| CDS TCA 72 bp | GTCGGAAACGGCGCTGCTGTCAATGGCCCAATTATCTaGAACCTTTTCATCAGTTACCAGTTTCCTGAATAC | + |
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Preference number: 6 (lower is better) Translates to: VGNGAAVNGPII*NLFISYQFPEY Trigger: GTATTCAGGAAACTGGTAACTGATGAAAAGGTTTCAGATAATTGGGCCATTGACAGCAGCGCCGTTTCCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074038.7 |
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