Pregenerated sensors for ACOXL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027380Ensembl transcript IDs: ENSMUST00000028859.8, ENSMUST00000110344.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTCCTCTGCCAGACCAAAATCCCCAAGGTGGCTGCCCTGCACCTaGCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: TSSARPKSPRWLPCT*HFGLCSSSGQILGR Trigger: TCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGGTCTGGCAGAGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR CCA 90 bp | TGCCAGACCAAAATCCCCAAGGTGGCTGCCCTGCACCTGCCACTTTaGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: CQTKIPKVAALHLPL*PLLQLWPNTWKMGH Trigger: GTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGGTCTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR GCA 90 bp | CCAAAATCCCCAAGGTGGCTGCCCTGCACCTGCCACTTTGGCCTCTaGTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATTT | + |
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Preference number: 1 (lower is better) Translates to: PKSPRWLPCTCHFGL*SSSGQILGRWDTKF Trigger: AAATTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCTGCACCTGCCACTTTaGCCTCTGCTCCAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLPDNLPCSSPALAGPPLLHLPL*PLLQLW Trigger: CCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAG...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGCTCGCCAGCCTTAGCTaGACCTCCTCTGCCAGACCA | + |
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Preference number: 2 (lower is better) Translates to: LSGGSRAMAGRSQGKGQALASLS*TSSARP Trigger: TGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAG...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR GCA 90 bp | CACCATGCGGTGGGCGAAGACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGATGCCACTTTGGCCTCTaGTCCAGCTCTGGCCAAATA | + |
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Preference number: 2 (lower is better) Translates to: HHAVGEDDCLGDPGPWLGCHFGL*SSSGQI Trigger: TATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCA...TCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTCTTCGCCCACCGCATGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCCAAAATCCCCAAGGTaGCTGCCCTGCACCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: IPIIPQASQPYLSKPREHPKSPR*LPCTCH Trigger: GTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGG...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR CCA 90 bp | CCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCCTCTGCTCCAGCTCTaGCCAAATACTTGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: PDNLPCSSPALAGPPLPDPLLQL*PNTWKM Trigger: CATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGG...GTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATGGGGATCCAGGGCCATaGCTGGGAGAAGTCAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: IPIIPQASQPYLSKPREHGDPGP*LGEVKV Trigger: TACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATAAGCTGGAGCAAGCCTaGTTCACGAATCATCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: IPIIPQASQPYLSKPREHKLEQA*FTNHPS Trigger: CGAGGGATGATTCGTGAATCAGGCTTGCTCCAGCTT...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATTGCCACTTTGGCCTCTaGTCCAGCTCTGGCCAAATA | + |
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Preference number: 2 (lower is better) Translates to: IPIIPQASQPYLSKPREHCHFGL*SSSGQI Trigger: TATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCA...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCTTTCTATTATTTATTAAATCCCCAAGGTGGCTaGCCTGCACCTGCCACTTTG | + |
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Preference number: 2 (lower is better) Translates to: GQPALPLQAAGASFYYLLNPQGG*PAPATL Trigger: CAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATT...TAATAAATAATAGAAAGATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR CCA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTCAAATACTTGGAAGATaGGACACTAAATTTCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: YPSMAPSPGQLALLLASLQILGR*DTKFLA Trigger: GGCGAGAAATTTAGTGTCCCATCTTCCAAGTATTTG...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCTTTCTATTATTTATTACCTCTGCTCCAGCTCTaGCCAAATACTTGGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: GQPALPLQAAGASFYYLLPLLQL*PNTWKM Trigger: CATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGG...TAATAAATAATAGAAAGATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATACATCTATGCTTTTCTaGAGGGTTGGTAACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: IPIIPQASQPYLSKPREHTSMLF*RVGNSL Trigger: TAAACTGTTACCAACCCTTCAGAAAAGCATAGATGT...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCTTTCTATTATTTATTAAAGTCTCTGGGAATATaGGTCACCACTGACAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: GQPALPLQAAGASFYYLLKSLGI*VTTDSR Trigger: TCTACTGTCAGTGGTGACTCATATTCCCAGAGACTT...TAATAAATAATAGAAAGATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCTTTCTATTATTTATTACAAATACTTGGAAGATaGGACACTAAATTTCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: GQPALPLQAAGASFYYLLQILGR*DTKFLA Trigger: GGCGAGAAATTTAGTGTCCCATCTTCCAAGTATTTG...TAATAAATAATAGAAAGATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR GCA 72 bp | TCCTCTGCCAGACCAAAATCCCCAAGGTGGCTGCCCTaGACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: SSARPKSPRWLP*TCHFGLCSSSG Trigger: GCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGGTCTGGCAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR GCA 72 bp | GGACCTCCTCTGCCAGACCAAAATCCCCAAGGTGGCTaGCCTGCACCTGCCACTTTGGCCTCTGCTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GPPLPDQNPQGG*PAPATLASAPA Trigger: AGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGGTCTGGCAGAGGAGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR GCA 72 bp | ATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTaGTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: IHLWLPLPDNLP*SSPALAGPPLP Trigger: TGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR GCA 72 bp | CCAAGGTGGCTGCCCTGCACCTGCCACTTTGGCCTCTaGTCCAGCTCTGGCCAAATACTTGGAAGATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: PRWLPCTCHFGL*SSSGQILGRWD Trigger: GTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR GCA 72 bp | GCCAGACCAAAATCCCCAAGGTGGCTGCCCTGCACCTaGCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: ARPKSPRWLPCT*HFGLCSSSGQI Trigger: TATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTTGGTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR CCA 72 bp | AAAATCCCCAAGGTGGCTGCCCTGCACCTGCCACTTTaGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: KIPKVAALHLPL*PLLQLWPNTWK Trigger: CTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGCAGGGCAGCCACCTTGGGGATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR TCA 72 bp | ACCCAGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATaGGTCACCACTGACAGTAGAGATCTTTGGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: TQRQSFSKSLGI*VTTDSRDLWWH Trigger: GTGCCACCAAAGATCTCTACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCATGCTGCTTGCTGTACTaGGCCAGCAGTTCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPDNLPCSSPALAGPPLPCCLLY*ASSSRA Trigger: GGCCCGGGAACTGCTGGCCCAGTACAGCAAGCAGCA...TGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR GCA 90 bp | CCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGGATCCCTCTCACGTTaGTCCCATGGCCCCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSPGQLALLLASLSWTSSGSLSR*SHGPSQ Trigger: CTGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCC...AGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACTCACGGCCAGGGCTGTaGCCAGGTGAGACATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYSRPGL*PGETSA Trigger: GGCTGATGTCTCACCTGGCCACAGCCCTGGCCGTGA...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTCCTGGTCCTCCCTGTTaGGACATTGCCTCACTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PSPGQLALLLASLSWTSSPGPPC*DIASLP Trigger: CGGCAGTGAGGCAATGTCCCAACAGGGAGGACCAGG...AGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | CCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACTCAGCAACTGAGCCCTaGTCAGCATGCTGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PDNLPCSSPALAGPPLPDSATEP*SACWPW Trigger: CCAAGGCCAGCATGCTGATCAGGGCTCAGTTGCTGA...GTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | GACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCGCGAGCGACTGTTGGTaGGCGCCCTTCCCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DDCLGDPGPWLGEVKVKAASDCW*APFPGR Trigger: TCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGC...GGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGTGCTCTGGAGTCCCTTaGCAGACAACACACTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PLPDNLPCSSPALAGPPLCSGVP*QTTHSL Trigger: CAGGGAGTGTGTTGTCTGCCAAGGGACTCCAGAGCA...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| 3UTR CAA 72 bp | TGGGGTATCCATCTATGGCTCCCTCTCCCGGACAACTaGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WGIHLWLPLPDN*PCSSPALAGPP Trigger: AGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | GATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCCCTGGCAGGCTCTCTaGAGAAATCCCTGTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DCLGDPGPWLGEVKVKARPWQAL*RNPCGP Trigger: GGGACCACAGGGATTTCTTCAGAGAGCCTGCCAGGG...CCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR GCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACCTTGTCCCCGGCAGTTaGTGTCCAGTTCTGGATCAC | + |
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Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYLVPGS*CPVLDH Trigger: GTGATCCAGAACTGGACAGCAACTGCCGGGGACAAG...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACCTCACGTTGCTCCCATaGCCCCTCTCAGTCATTGCA | + |
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Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYLTLLP*PLSVIA Trigger: TGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAG...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CCA 90 bp | CACCATGCGGTGGGCGAAGACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGTTGCTGTCCAGTTCTaGATCACACCCAAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HHAVGEDDCLGDPGPWLGVAVQF*ITPKSR Trigger: CCTGCTCTTGGGTGTGATCCAGAACTGGACAGCAAC...TCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTCTTCGCCCACCGCATGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | GCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCATACCAGCCTCGCTCCTaGAACACCAGCTTCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALLLASLSWTSSARPKSPYQPRS*NTSFVP Trigger: TGGAACGAAGCTGGTGTTCCAGGAGCGAGGCTGGTA...TGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| 3UTR CAA 72 bp | AGATCTTTGGTGGCACCATGCGGTGGGCGAAGACGATaGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RSLVAPCGGRRR*SGGSRAMAGRS Trigger: ACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTCTTCGCCCACCGCATGGTGCCACCAAAGATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGAAGGGCTGTGGCCAGGTaGGACATCAGCCTGAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGRAVAR*DISLSA Trigger: GGCACTCAGGCTGATGTCTCACCTGGCCACAGCCCT...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGGTGTGCCAGAGACAATaGGGTGACATGGTGCATACA | + |
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Preference number: 4 (lower is better) Translates to: PLPDNLPCSSPALAGPPLVCQRQ*GDMVHT Trigger: TGTATGCACCATGTCACCTCATTGTCTCTGGCACAC...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | GACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCTCAGCAACTGAGCCCTaGTCAGCATGCTGGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DDCLGDPGPWLGEVKVKASATEP*SACWPW Trigger: CCAAGGCCAGCATGCTGATCAGGGCTCAGTTGCTGA...GGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGATCACGGCCAGGGCTGTaGCCAGGTGAGACATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGSRPGL*PGETSA Trigger: GGCTGATGTCTCACCTGGCCACAGCCCTGGCCGTGA...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCAAGTGAGCGCCCTTCCCTaGAAGATGTCTTCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PCSSPALAGPPLPDQNPQVSALP*KMSSSR Trigger: CCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCAC...TTGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGGAGTTCCAGGCACTaGAGAAGTCCCCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YPSMAPSPGQLALLLASLRSSRH*RSPPSW Trigger: CCAAGAAGGGGGACTTCTTCAGTGCCTGGAACTCCT...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR TCA 90 bp | GATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGAGGAGTTCCAGGCACTaGAGAAGTCCCCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DCLGDPGPWLGEVKVKARRSSRH*RSPPSW Trigger: CCAAGAAGGGGGACTTCTTCAGTGCCTGGAACTCCT...CCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR GCA 90 bp | CCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTATCAGCCTGAGTGCCTaGATTTGGTGCTCAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSPGQLALLLASLSWTSSISLSA*IWCSMI Trigger: GATCATTGAGCACCAAATGCAGGCACTCAGGCTGAT...AGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGTCAGCATGCTGGCCTTaGGGGTCAGGTATTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPDNLPCSSPALAGPPLSACWP*GSGIYV Trigger: AACATAAATACCTGACCCCCAAGGCCAGCATGCTGA...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGGTGTGCCAGAGACAATaGGGTGACATGGTGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSRAMAGRSQGKGQAVCQRQ*GDMVHT Trigger: TGTATGCACCATGTCACCTCATTGTCTCTGGCACAC...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | GACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCTGGACACATCCACCATaGAGAGCACTTCTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DDCLGDPGPWLGEVKVKAWTHPP*RALLPG Trigger: TCCTGGGAGAAGTGCTCTGCATGGTGGATGTGTCCA...GGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACAGGTTTTTCTTATGCTaGTTGCTGTACTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYRFFLC*LLYWAS Trigger: GCTGGCCCAGTACAGCAAGCAGCATAAGAAAAACCT...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CACCATGCGGTGGGCGAAGACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGACCCAGGATAAGGATTTaGCTGATGAAGCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAVGEDDCLGDPGPWLGPRIRI*LMKLFL Trigger: AAGGAAGAGCTTCATCAGCCAAATCCTTATCCTGGG...TCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTCTTCGCCCACCGCATGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCAACCAGCAGGTTCTCTCTaGGAATCCGAACCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PCSSPALAGPPLPDQNPQPAGSL*ESEPCQ Trigger: TTGACAAGGTTCGGATTCCCAGAGAGAACCTGCTGG...TTGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | GCACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGGTGAGCGCCCTTCCCTaGAAGATGTCTTCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APATLASAPALAKYLEDGVSALP*KMSSSR Trigger: CCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCAC...CCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACGACAATGAGGTGACATaGTGCATACAGGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYDNEVT*CIQEFQ Trigger: CTGGAACTCCTGTATGCACCATGTCACCTCATTGTC...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | AGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAGAGAGGGCTGTGGCCAGGTaGGACATCAGCCTGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SARAFRSLWEYESPLTVERAVAR*DISLSA Trigger: GGCACTCAGGCTGATGTCTCACCTGGCCACAGCCCT...CTCTACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGCCACAACCTGAAGCATaGCCACATTGTCACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSRAMAGRSQGKGQAPQPEA*PHCHLQ Trigger: TTGAAGGTGACAATGTGGTCATGCTTCAGGTTGTGG...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGGACACCAAACTCCGCTaGAGAACCCTTTCTCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSRAMAGRSQGKGQADTKLR*RTLSRK Trigger: TTTTCGAGAAAGGGTTCTTCAGCGGAGTTTGGTGTC...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | GCACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGTTCCATGATTCCAGCTaGTCTGGAGTCCCTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APATLASAPALAKYLEDGFHDSS*SGVPWQ Trigger: CTGCCAAGGGACTCCAGAGCAGCTGGAATCATGGAA...CCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTTCCCATGCATGGCATTaGCGATGTACATCTTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPSMAPSPGQLALLLASLSHAWH*RCTSCG Trigger: CCCACAAGATGTACATCGGCAATGCCATGCATGGGA...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCAAATCAGCCTGAGTGCCTaGATTTGGTGCTCAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: PCSSPALAGPPLPDQNPQISLSA*IWCSMI Trigger: GATCATTGAGCACCAAATGCAGGCACTCAGGCTGAT...TTGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCAGACATCAGCCTGAGTaGCTGCATTTGGTGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LALLLASLSWTSSARPKSRHQPE*LHLVLN Trigger: ATTGAGCACCAAATGCAGGCACTCAGGCTGATGTCT...GGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCAAAGGTTTTTCTTATGCTaGTTGCTGTACTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCSSPALAGPPLPDQNPQRFFLC*LLYWAS Trigger: GCTGGCCCAGTACAGCAAGCAGCATAAGAAAAACCT...TTGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGATGTCGAGGTCAAAGGTaGCCTCAGTCTGGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGCRGQR*PQSGSL Trigger: GAGGGATCCAGACTGAGGCCACCTTTGACCTCGACA...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGTCAGGTCTGAGATTCTaGTTTCCATCATGTAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPDNLPCSSPALAGPPLSGLRF*FPSCNP Trigger: TGGGTTACATGATGGAAACCAGAATCTCAGACCTGA...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATGCTGCTTGCTGTACTaGGCCAGCAGTTCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFGLCSSSGQILGRWDTKCCLLY*ASSSRA Trigger: GGCCCGGGAACTGCTGGCCCAGTACAGCAAGCAGCA...TTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGGACAATGAGGTGACATaGTGCATACAGGAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSRAMAGRSQGKGQADNEVT*CIQEFQ Trigger: CTGGAACTCCTGTATGCACCATGTCACCTCATTGTC...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACACGGATGGTGATGTGTaGAATGTTGAAGGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYTDGDV*NVEGRD Trigger: ATCTCTGCCTTCAACATTCCACACATCACCATCCGT...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACGTCACATTTCAGGTCTaGGATTCTGGTTTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDPGPWLGEVKVKARRGYVTFQV*DSGFHH Trigger: ATGATGGAAACCAGAATCTCAGACCTGAAATGTGAC...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | GCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCCCAGTCACATTTCAGGTCTaGGATTCTGGTTTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLASLSWTSSARPKSPVTFQV*DSGFHH Trigger: ATGATGGAAACCAGAATCTCAGACCTGAAATGTGAC...TGGGGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | GACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCGACACCAAACTCCGCTaGAGAACCCTTTCTCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DDCLGDPGPWLGEVKVKADTKLR*RTLSRK Trigger: TTTTCGAGAAAGGGTTCTTCAGCGGAGTTTGGTGTC...GGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACCAAAATCCACGGATGGTGATGTGTaGAATGTTGAAGGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LALLLASLSWTSSARPKSTDGDV*NVEGRD Trigger: ATCTCTGCCTTCAACATTCCACACATCACCATCCGT...GGATTTTGGTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR TCA 90 bp | GCACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGCCACAACCTGAAGCATaGCCACATTGTCACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: APATLASAPALAKYLEDGPQPEA*PHCHLQ Trigger: TTGAAGGTGACAATGTGGTCATGCTTCAGGTTGTGG...CCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGTGCCTGCATTTGGTaGTCAATGATCTTCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSRAMAGRSQGKGQASACIW*SMIFTS Trigger: AGAAGTGAAGATCATTGAGCACCAAATGCAGGCACT...CGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | GATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGTTTTCTTATGCTGCTTaGTGTACTGGGCCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCLGDPGPWLGEVKVKARFSYAA*CTGPAV Trigger: AACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAA...CCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | GATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGAGTGCCTGCATTTGGTaGTCAATGATCTTCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DCLGDPGPWLGEVKVKARSACIW*SMIFTS Trigger: AGAAGTGAAGATCATTGAGCACCAAATGCAGGCACT...CCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGAAGACATCAGCCTGAGTaGCTGCATTTGGTGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGRHQPE*LHLVLN Trigger: ATTGAGCACCAAATGCAGGCACTCAGGCTGATGTCT...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | TGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATTTCTCGCCTGGCTTGTCCCCGGCAGTTaGTGTCCAGTTCTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSSGQILGRWDTKFLAWLVPGS*CPVLDH Trigger: GTGATCCAGAACTGGACAGCAACTGCCGGGGACAAG...CCAGGCGAGAAATTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | GCACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGCTGAGTGCCTGCATTTaGTGCTCAATGATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: APATLASAPALAKYLEDGLSACI*CSMIFT Trigger: AGTGAAGATCATTGAGCACCAAATGCAGGCACTCAG...CCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTTCAGGTCTGAGATTCTaGTTTCCATCATGTAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPSMAPSPGQLALLLASLSGLRF*FPSCNP Trigger: TGGGTTACATGATGGAAACCAGAATCTCAGACCTGA...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAGTTGCTGTCCAGTTCTaGATCACACCCAAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSARAFRSLWEYESPLTVVAVQF*ITPKSR Trigger: CCTGCTCTTGGGTGTGATCCAGAACTGGACAGCAAC...TACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATTTCTCGCCTGGTACCAGCCTCGCTCCTaGAACACCAGCTTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSSSGQILGRWDTKFLAWYQPRS*NTSFVP Trigger: TGGAACGAAGCTGGTGTTCCAGGAGCGAGGCTGGTA...CCAGGCGAGAAATTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGAATCCCAGTATACTTCTaGTCCTTGAGTGGCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGIPVYF*SLSGQN Trigger: GTTTTGGCCACTCAAGGAGCAGAAGTATACTGGGAT...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGAGCCCCTCTCAGTCATTaGAAACATCCCAGTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGAPLSH*KHPSIL Trigger: AAGTATACTGGGATGTTTGCAATGACTGAGAGGGGC...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAATAGCTGTCACTCCTaGGTACAAGTTTCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPSMAPSPGQLALLLASLNSCHS*VQVSIF Trigger: GAAAATGGAAACTTGTACCCAGGAGTGACAGCTATT...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | GCACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGTTCATACCCTCTTTGTaGATCATGTCAATAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: APATLASAPALAKYLEDGFIPSL*IMSIAV Trigger: GACAGCTATTGACATGATGCACAAAGAGGGTATGAA...CCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR TCA 90 bp | AGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAGAGTATACTTCTGCTCCTTaGGTGGCCAAAACCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SARAFRSLWEYESPLTVEYTSAP*VAKTTW Trigger: CCAAGTGGTTTTGGCCACTCAAGGAGCAGAAGTATA...CTCTACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATCTTTCTATTATTTATTATTTTCTTATGCTGCTTaGTGTACTGGGCCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQPALPLQAAGASFYYLLFSYAA*CTGPAV Trigger: AACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAA...TAATAAATAATAGAAAGATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAACTTCTGCTCCTTGAGTaGCCAAAACCACTTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HFGLCSSSGQILGRWDTKLLLLE*PKPLGN Trigger: GTTACCAAGTGGTTTTGGCCACTCAAGGAGCAGAAG...TTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATTTCTCGCCTGGATGGCGCCCAAAGCTTaGAAAGTCACTGCTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSSGQILGRWDTKFLAWMAPKA*KVTASL Trigger: AAGACTAGCAGTGACTTTCCAAGCTTTGGGCGCCAT...CCAGGCGAGAAATTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
||
| CDS-3UTR CCA 90 bp | CACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATCAGCATGCTGGCCTTaGGGGTCAGGTATTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HFGLCSSSGQILGRWDTKSACWP*GSGIYV Trigger: AACATAAATACCTGACCCCCAAGGCCAGCATGCTGA...TTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | AGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAGAGCTGAGTGCCTGCATTTaGTGCTCAATGATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SARAFRSLWEYESPLTVELSACI*CSMIFT Trigger: AGTGAAGATCATTGAGCACCAAATGCAGGCACTCAG...CTCTACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | AGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAGAGAGAAGTCCCCCTTCTTaGTCACCACCTTATAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SARAFRSLWEYESPLTVERSPPS*SPPYSK Trigger: TTTACTATAAGGTGGTGACCAAGAAGGGGGACTTCT...CTCTACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CCA 90 bp | CACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAAAGAAGTCCCCCTTCTTaGTCACCACCTTATAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HFGLCSSSGQILGRWDTKRSPPS*SPPYSK Trigger: TTTACTATAAGGTGGTGACCAAGAAGGGGGACTTCT...TTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | GGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGCGAGGCTACTGGATCCCTCTCACGTaGCTCCCATGGCCCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GDPGPWLGEVKVKARRGYWIPLT*LPWPLS Trigger: TGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCCA...GTAGCCTCGCCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | CCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCTTGTCCCCGGCAGTaGCTGTCCAGTTCTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPGQLALLLASLSWTSSACPRQ*LSSSGS Trigger: TGATCCAGAACTGGACAGCAACTGCCGGGGACAAGC...AGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | TATCCATCTATGGCTCCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTCTGCTCTGGAGTCCCTaGGCAGACAACACACTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YPSMAPSPGQLALLLASLLLWSP*ADNTLP Trigger: AGGGAGTGTGTTGTCTGCCAAGGGACTCCAGAGCAG...AAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGGAGCCATAGATGGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCTGAGTGCCTGCATTaGGTGCTCAATGATCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPDNLPCSSPALAGPPLPECLH*VLNDLH Trigger: GTGAAGATCATTGAGCACCAAATGCAGGCACTCAGG...CAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | CCCTCTCCCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTCCTGAGTGCCTGCATTaGGTGCTCAATGATCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPGQLALLLASLSWTSSPECLH*VLNDLH Trigger: GTGAAGATCATTGAGCACCAAATGCAGGCACTCAGG...AGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGGGAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 90 bp | GCCATCAGTGCCTGTAGCGAGCGACTGTTGGTGAGCGCCCTTCCCTaGAAGATGTCTTCATCCAGGATGTCGTCTGCATGCCTGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AISACSERLLVSALP*KMSSSRMSSACLLV Trigger: CACAAGCAGGCATGCAGACGACATCCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGCTACAGGCACTGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 90 bp | TCTGCATGCCTGCTTGTGAAGGTCACGGCCAGGGCTGTGGCCAGGTaGGACATCAGCCTGAGTGCCTGCATTTGGTGCTCAATGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SACLLVKVTARAVAR*DISLSACIWCSMIF Trigger: GAAGATCATTGAGCACCAAATGCAGGCACTCAGGCTGATGTCTCACCTGGCCACAGCCCTGGCCGTGACCTTCACAAGCAGGCATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 90 bp | AGGCTTTCAGTCCAGCCATCAGTGCCTGTAGCGAGCGACTGTTGGTaGGCGCCCTTCCCTGGAAGATGTCTTCATCCAGGATGTCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSVQPSVPVASDCW*APFPGRCLHPGCRL Trigger: CAGACGACATCCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGCTACAGGCACTGATGGCTGGACTGAAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | CCGGACAACTTGCCCTGCTCCTCGCCAGCCTTAGCTGGACCTCCTCTGCCAGACTCAGGACTTCCAAGATaGCTGATTGCACCACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PDNLPCSSPALAGPPLPDSGLPR*LIAPPN Trigger: ATTTGGTGGTGCAATCAGCAATCTTGGAAGTCCTGA...GTCTGGCAGAGGAGGTCCAGCTAAGGCTGGCGAGGAGCAGGGCAAGTTGTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | CACCATGCGGTGGGCGAAGACGATTGTCTGGGGGATCCAGGGCCATGGCTGGGAAGTGGCCAAAACCACTaGGTAACATGTTCAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: HHAVGEDDCLGDPGPWLGSGQNH*VTCSGL Trigger: AAGTCCTGAACATGTTACCAAGTGGTTTTGGCCACT...TCCCAGCCATGGCCCTGGATCCCCCAGACAATCGTCTTCGCCCACCGCATGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | CACCTGCCACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGAGCTTGTCCCCGGCAGTaGCTGTCCAGTTCTGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HLPLWPLLQLWPNTWKMGACPRQ*LSSSGS Trigger: TGATCCAGAACTGGACAGCAACTGCCGGGGACAAGC...TCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTGGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 90 bp | CACACGGCATGTCAATCACAAACTCCTGATTGTCGAGGTCAAAGGTaGCCTCAGTCTGGATCCCTCTCACGTTGCTCCCATGGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTACQSQTPDCRGQR*PQSGSLSRCSHGPS Trigger: AGAGGGGCCATGGGAGCAACGTGAGAGGGATCCAGACTGAGGCCACCTTTGACCTCGACAATCAGGAGTTTGTGATTGACATGCCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | CCTTGTCCTTGGGCCCAAATTGCCTTCGGCTGTGGCTGTAGCGGATaGCTATCATCAGTCCAAGCTTCATGGCGCCCAAAGCTTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCPWAQIAFGCGCSG*LSSVQASWRPKLGK Trigger: CTTTCCAAGCTTTGGGCGCCATGAAGCTTGGACTGATGATAGCCATCCGCTACAGCCACAGCCGAAGGCAATTTGGGCCCAAGGACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATGGCCCCTCTCAGTCATaGCAAACATCCCAGTATACT | + |
|
Preference number: 5 (lower is better) Translates to: IPIIPQASQPYLSKPREHGPSQS*QTSQYT Trigger: AGTATACTGGGATGTTTGCAATGACTGAGAGGGGCC...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | ATTCCAATTATTCCCCAGGCCAGCCAGCCCTACCTCTCCAAGCCGCGGGAGCATATCAGCATGCTGGCCTaGGGGGTCAGGTATTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: IPIIPQASQPYLSKPREHISMLA*GVRYLC Trigger: ACATAAATACCTGACCCCCAAGGCCAGCATGCTGAT...ATGCTCCCGCGGCTTGGAGAGGTAGGGCTGGCTGGCCTGGGGAATAATTGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | AGGTCAAAGGTGGCCTCAGTCTGGATCCCTCTCACGTTGCTCCCATaGCCCCTCTCAGTCATTGCAAACATCCCAGTATACTTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSKVASVWIPLTLLP*PLSVIANIPVYFCS Trigger: GGAGCAGAAGTATACTGGGATGTTTGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCCAGACTGAGGCCACCTTTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS-3UTR CAA 90 bp | GATTGTCTGGGGGATCCAGGGCCATGGCTGGGAGAAGTCAAGGTAAAGGCCAGGTTTTTCTTATGCTGCTaGCTGTACTGGGCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DCLGDPGPWLGEVKVKARFFLCC*LYWASS Trigger: ACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAAA...CCTGGCCTTTACCTTGACTTCTCCCAGCCATGGCCCTGGATCCCCCAGACAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 90 bp | ACCTTCAGGGCGTCATCCTTCACGGACTCGCACAAATTCAGCAACTaGGCCCTGATCAGCATGCTGGCCTTGGGGGTCAGGTATTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: TFRASSFTDSHKFSN*ALISMLALGVRYLC Trigger: ACATAAATACCTGACCCCCAAGGCCAGCATGCTGATCAGGGCTCAGTTGCTGAATTTGTGCGAGTCCGTGAAGGATGACGCCCTGAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 90 bp | GATTGTCGAGGTCAAAGGTGGCCTCAGTCTGGATCCCTCTCACGTTaGTCCCATGGCCCCTCTCAGTCATTGCAAACATCCCAGTATACT | + |
|
Preference number: 5 (lower is better) Translates to: DCRGQRWPQSGSLSR*SHGPSQSLQTSQYT Trigger: AGTATACTGGGATGTTTGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCCAGACTGAGGCCACCTTTGACCTCGACAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | TGGCAGACAACACACTCCCTGGCAGGCTCTCTGAAGAAATCCCTGTaGTCCCCGCAGATGACAGCACACTTTGGATGCCAATCTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: WQTTHSLAGSLKKSL*SPQMTAHFGCQSIQ Trigger: CTGTATAGATTGGCATCCAAAGTGTGCTGTCATCTGCGGGGACCACAGGGATTTCTTCAGAGAGCCTGCCAGGGAGTGTGTTGTCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 90 bp | AGTCTGGATCCCTCTCACGTTGCTCCCATGGCCCCTCTCAGTCATTaGAAACATCCCAGTATACTTCTGCTCCTTGAGTGGCCAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLDPSHVAPMAPLSH*KHPSILLLLEWPKP Trigger: TGGTTTTGGCCACTCAAGGAGCAGAAGTATACTGGGATGTTTGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCCAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | TTCGGCTGTGGCTGTAGCGGATGGCTATCATCAGTCCAAGCTTCATaGCGCCCAAAGCTTGGAAAGTCACTGCTAGTCTTGAAGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FGCGCSGWLSSVQAS*RPKLGKSLLVLKES Trigger: TGACTCCTTCAAGACTAGCAGTGACTTTCCAAGCTTTGGGCGCCATGAAGCTTGGACTGATGATAGCCATCCGCTACAGCCACAGCCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | ACCAGCTTCGTTCCATACAGCAGACAAAACTTCATTAGCAAAGCCTaGTCCTCCCTGTTGGGACATTGCCTCACTGCCGTCGTGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSFVPYSRQNFISKA*SSLLGHCLTAVVNC Trigger: GCAGTTCACGACGGCAGTGAGGCAATGTCCCAACAGGGAGGACCAGGCTTTGCTAATGAAGTTTTGTCTGCTGTATGGAACGAAGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 90 bp | AGGAAACTGGTTCTCAGCTTGTCCCCGGCAGTTGCTGTCCAGTTCTaGATCACACCCAAGAGCAGGTTTTTCTTATGCTGCTTGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RKLVLSLSPAVAVQF*ITPKSRFFLCCLLY Trigger: GTACAGCAAGCAGCATAAGAAAAACCTGCTCTTGGGTGTGATCCAGAACTGGACAGCAACTGCCGGGGACAAGCTGAGAACCAGTTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCGCCAGAGCTTTTCGAAGTCTCTGGGAATATGAGTCACCACTGACAGTAATCAGCATGCTGGCCTaGGGGGTCAGGTATTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: PSARAFRSLWEYESPLTVISMLA*GVRYLC Trigger: ACATAAATACCTGACCCCCAAGGCCAGCATGCTGAT...TACTGTCAGTGGTGACTCATATTCCCAGAGACTTCGAAAAGCTCTGGCGCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 90 bp | AGTGTTAAACGCCAGGAAACTGGTTCTCAGCTTGTCCCCGGCAGTTaGTGTCCAGTTCTGGATCACACCCAAGAGCAGGTTTTTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SVKRQETGSQLVPGS*CPVLDHTQEQVFLM Trigger: CATAAGAAAAACCTGCTCTTGGGTGTGATCCAGAACTGGACAGCAACTGCCGGGGACAAGCTGAGAACCAGTTTCCTGGCGTTTAACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 90 bp | CTGAAGAAATCCCTGTGGTCCCCGCAGATGACAGCACACTTTGGATaGCAATCTATACAGAGGGACTTCTATAAACAGTCCACTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LKKSLWSPQMTAHFG*QSIQRDFYKQSTPS Trigger: GGATGGAGTGGACTGTTTATAGAAGTCCCTCTGTATAGATTGGCATCCAAAGTGTGCTGTCATCTGCGGGGACCACAGGGATTTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 90 bp | GCCTTGGGGGTCAGGTATTTATGTTCTAAGTACCAGCCTCGCTCCTaGAACACCAGCTTCGTTCCATACAGCAGACAAAACTTCATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGVRYLCSKYQPRS*NTSFVPYSRQNFIS Trigger: GCTAATGAAGTTTTGTCTGCTGTATGGAACGAAGCTGGTGTTCCAGGAGCGAGGCTGGTACTTAGAACATAAATACCTGACCCCCAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS-3UTR CAA 90 bp | CACTTTGGCCTCTGCTCCAGCTCTGGCCAAATACTTGGAAGATGGGACACTAAATTTTTCTTATGCTGCTaGCTGTACTGGGCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFGLCSSSGQILGRWDTKFFLCC*LYWASS Trigger: ACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAAA...TTTAGTGTCCCATCTTCCAAGTATTTGGCCAGAGCTGGAGCAGAGGCCAAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 90 bp | GGAGTCAGTGTTGCCAGGATCGCATTGAATCTTGCGTTCTTGCTTTaGATAGGTGAATGGTATTGTCCATCTGGAGTCACAGAACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVSVARIALNLAFLL*IGEWYCPSGVTEPN Trigger: GTTTGGTTCTGTGACTCCAGATGGACAATACCATTCACCTATTCAAAGCAAGAACGCAAGATTCAATGCGATCCTGGCAACACTGACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS TCA 90 bp | GTCACCTTCAAAGGTTACAAACACATCTGTGTCACATTTCAGGTCTaGGATTCTGGTTTCCATCATGTAACCCATGCCTCCGGTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VTFKGYKHICVTFQV*DSGFHHVTHASGAF Trigger: GAATGCACCGGAGGCATGGGTTACATGATGGAAACCAGAATCTCAGACCTGAAATGTGACACAGATGTGTTTGTAACCTTTGAAGGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 90 bp | TCTGGACACCAAACTCCGCTGAAGAACCCTTTCTCGAAAATTCACTaGTTTCAGCAGAAAGGCAAGACATCCTACCGTGTCAGTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGHQTPLKNPFSKIH*FQQKGKTSYRVSVK Trigger: TTTAACACTGACACGGTAGGATGTCTTGCCTTTCTGCTGAAAGCAGTGAATTTTCGAGAAAGGGTTCTTCAGCGGAGTTTGGTGTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 90 bp | CAAAGGTTACAAACACATCTGTGTCACATTTCAGGTCTGAGATTCTaGTTTCCATCATGTAACCCATGCCTCCGGTGCATTCACGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRLQTHLCHISGLRF*FPSCNPCLRCIHDS Trigger: ACTGTCGTGAATGCACCGGAGGCATGGGTTACATGATGGAAACCAGAATCTCAGACCTGAAATGTGACACAGATGTGTTTGTAACCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 90 bp | TGTTGCCAGGATCGCATTGAATCTTGCGTTCTTGCTTTGAATAGGTaGATGGTATTGTCCATCTGGAGTCACAGAACCAAACTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCQDRIESCVLALNR*MVLSIWSHRTKLIQ Trigger: CTGGATAAGTTTGGTTCTGTGACTCCAGATGGACAATACCATTCACCTATTCAAAGCAAGAACGCAAGATTCAATGCGATCCTGGCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 90 bp | TCAAATATCAAAATTCCGTTATCCACACCATTCATACCCTCTTTGTaGATCATGTCAATAGCTGTCACTCCTGGGTACAAGTTTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SNIKIPLSTPFIPSL*IMSIAVTPGYKFPF Trigger: AAATGGAAACTTGTACCCAGGAGTGACAGCTATTGACATGATGCACAAAGAGGGTATGAATGGTGTGGATAACGGAATTTTGATATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 72 bp | GTTGAGCGCGCGCCGCATCCCGCACGAGCGGTTGCATaGGTGCCGGGTAGGCGGCCTCGGCAGCCCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VERAPHPARAVA*VPGRRPRQPRG Trigger: ACCCCGGGGCTGCCGAGGCCGCCTACCCGGCACCCATGCAACCGCTCGTGCGGGATGCGGCGCGCGCTCAAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | CTGCTTGTGAAGGTCACGGCCAGGGCTGTGGCCAGGTaGGACATCAGCCTGAGTGCCTGCATTTGGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLVKVTARAVAR*DISLSACIWCS Trigger: TGAGCACCAAATGCAGGCACTCAGGCTGATGTCTCACCTGGCCACAGCCCTGGCCGTGACCTTCACAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | CCCTGGAAGATGTCTTCATCCAGGATGTCGTCTGCATaGCTGCTTGTGAAGGTCACGGCCAGGGCTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWKMSSSRMSSA*LLVKVTARAVA Trigger: GGCCACAGCCCTGGCCGTGACCTTCACAAGCAGGCATGCAGACGACATCCTGGATGAAGACATCTTCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | TGTCTTCATCCAGGATGTCGTCTGCATGCCTGCTTGTaGAGGTCACGGCCAGGGCTGTGGCCAGGTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CLHPGCRLHACL*RSRPGLWPGET Trigger: TGTCTCACCTGGCCACAGCCCTGGCCGTGACCTTCACAAGCAGGCATGCAGACGACATCCTGGATGAAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | GTCCAGCCATCAGTGCCTGTAGCGAGCGACTGTTGGTaGGCGCCCTTCCCTGGAAGATGTCTTCATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VQPSVPVASDCW*APFPGRCLHPG Trigger: TCCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGCTACAGGCACTGATGGCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS CCA 72 bp | GCCTGTAGCGAGCGACTGTTGGTGAGCGCCCTTCCCTaGAAGATGTCTTCATCCAGGATGTCGTCTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ACSERLLVSALP*KMSSSRMSSAC Trigger: GCATGCAGACGACATCCTGGATGAAGACATCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGCTACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
||
| CDS GCA 72 bp | CCTTCCCTGGAAGATGTCTTCATCCAGGATGTCGTCTaGATGCCTGCTTGTGAAGGTCACGGCCAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLEDVFIQDVV*MPACEGHGQGC Trigger: ACAGCCCTGGCCGTGACCTTCACAAGCAGGCATGCAGACGACATCCTGGATGAAGACATCTTCCAGGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | CGCCAGGAAACTGGTTCTCAGCTTGTCCCCGGCAGTTaGTGTCCAGTTCTGGATCACACCCAAGAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: RQETGSQLVPGS*CPVLDHTQEQV Trigger: AACCTGCTCTTGGGTGTGATCCAGAACTGGACAGCAACTGCCGGGGACAAGCTGAGAACCAGTTTCCTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 72 bp | TGGGCCCAAATTGCCTTCGGCTGTGGCTGTAGCGGATaGCTATCATCAGTCCAAGCTTCATGGCGCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: WAQIAFGCGCSG*LSSVQASWRPK Trigger: CTTTGGGCGCCATGAAGCTTGGACTGATGATAGCCATCCGCTACAGCCACAGCCGAAGGCAATTTGGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | TTCAGTCCAGCCATCAGTGCCTGTAGCGAGCGACTGTaGGTGAGCGCCCTTCCCTGGAAGATGTCTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: FSPAISACSERL*VSALPWKMSSS Trigger: GGATGAAGACATCTTCCAGGGAAGGGCGCTCACCAACAGTCGCTCGCTACAGGCACTGATGGCTGGACTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | GGATCACACCCAAGAGCAGGTTTTTCTTATGCTGCTTaGTGTACTGGGCCAGCAGTTCCCGGGCCACAACCT | + |
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Preference number: 6 (lower is better) Translates to: GSHPRAGFSYAA*CTGPAVPGPQP Trigger: AGGTTGTGGCCCGGGAACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAAACCTGCTCTTGGGTGTGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | CAGTTCTGGATCACACCCAAGAGCAGGTTTTTCTTATaGTGCTTGCTGTACTGGGCCAGCAGTTCCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QFWITPKSRFFL*CLLYWASSSRA Trigger: GGCCCGGGAACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAAACCTGCTCTTGGGTGTGATCCAGAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 72 bp | ACACACTCCCTGGCAGGCTCTCTGAAGAAATCCCTGTaGTCCCCGCAGATGACAGCACACTTTGGATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: THSLAGSLKKSL*SPQMTAHFGCQ Trigger: TTGGCATCCAAAGTGTGCTGTCATCTGCGGGGACCACAGGGATTTCTTCAGAGAGCCTGCCAGGGAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 72 bp | GTGGCCTCAGTCTGGATCCCTCTCACGTTGCTCCCATaGCCCCTCTCAGTCATTGCAAACATCCCAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: VASVWIPLTLLP*PLSVIANIPVY Trigger: GTATACTGGGATGTTTGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAGAGGGATCCAGACTGAGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 72 bp | CCCTCTCACGTTGCTCCCATGGCCCCTCTCAGTCATTaGAAACATCCCAGTATACTTCTGCTCCTTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PSHVAPMAPLSH*KHPSILLLLEW Trigger: CCACTCAAGGAGCAGAAGTATACTGGGATGTTTGCAATGACTGAGAGGGGCCATGGGAGCAACGTGAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 72 bp | TTCTGGATCACACCCAAGAGCAGGTTTTTCTTATGCTaGTTGCTGTACTGGGCCAGCAGTTCCCGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: FWITPKSRFFLC*LLYWASSSRAT Trigger: TGTGGCCCGGGAACTGCTGGCCCAGTACAGCAAGCAGCATAAGAAAAACCTGCTCTTGGGTGTGATCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | CTCACTGCCGTCGTGAACTGCTCTAGTGCAACTCTGTaGATGTGTGCCAGAGACAATGAGGTGACATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LTAVVNCSSATL*MCARDNEVTWC Trigger: GCACCATGTCACCTCATTGTCTCTGGCACACATTCACAGAGTTGCACTAGAGCAGTTCACGACGGCAGTGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | CCTTCACGGACTCGCACAAATTCAGCAACTGAGCCCTaGTCAGCATGCTGGCCTTGGGGGTCAGGTATTTAT | + |
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Preference number: 6 (lower is better) Translates to: PSRTRTNSATEP*SACWPWGSGIY Trigger: ATAAATACCTGACCCCCAAGGCCAGCATGCTGATCAGGGCTCAGTTGCTGAATTTGTGCGAGTCCGTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | TTCATTAGCAAAGCCTGGTCCTCCCTGTTGGGACATTaGCTCACTGCCGTCGTGAACTGCTCTAGTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: FISKAWSSLLGH*LTAVVNCSSAT Trigger: AGTTGCACTAGAGCAGTTCACGACGGCAGTGAGGCAATGTCCCAACAGGGAGGACCAGGCTTTGCTAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 72 bp | TTTTTCTTCCATGATTCCAGCTGCTCTGGAGTCCCTTaGCAGACAACACACTCCCTGGCAGGCTCTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FFFHDSSCSGVP*QTTHSLAGSLK Trigger: CTTCAGAGAGCCTGCCAGGGAGTGTGTTGTCTGCCAAGGGACTCCAGAGCAGCTGGAATCATGGAAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 72 bp | GGCTGTAGCGGATGGCTATCATCAGTCCAAGCTTCATaGCGCCCAAAGCTTGGAAAGTCACTGCTAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GCSGWLSSVQAS*RPKLGKSLLVL Trigger: CAAGACTAGCAGTGACTTTCCAAGCTTTGGGCGCCATGAAGCTTGGACTGATGATAGCCATCCGCTACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 90 bp | TTGGGGATTCCTGTTTTTGGTGCACGGATGGTGATGTGTGGAATGTaGAAGGCAGAGATCACCTTCAGGGCGTCATCCTTCACGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: LGIPVFGARMVMCGM*KAEITFRASSFTDS Trigger: CGAGTCCGTGAAGGATGACGCCCTGAAGGTGATCTCTGCCTTCAACATTCCACACATCACCATCCGTGCACCAAAAACAGGAATCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CAA 90 bp | TTGGTGCTCAATGATCTTCACTTCTTCCTTGTCCTTGGGCCCAAATaGCCTTCGGCTGTGGCTGTAGCGGATGGCTATCATCAGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVLNDLHFFLVLGPK*PSAVAVADGYHQSK Trigger: CTTGGACTGATGATAGCCATCCGCTACAGCCACAGCCGAAGGCAATTTGGGCCCAAGGACAAGGAAGAAGTGAAGATCATTGAGCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 90 bp | CCATACAGCAGACAAAACTTCATTAGCAAAGCCTGGTCCTCCCTGTaGGGACATTGCCTCACTGCCGTCGTGAACTGCTCTAGTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: PYSRQNFISKAWSSL*GHCLTAVVNCSSAT Trigger: AGTTGCACTAGAGCAGTTCACGACGGCAGTGAGGCAATGTCCCAACAGGGAGGACCAGGCTTTGCTAATGAAGTTTTGTCTGCTGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS GCA 72 bp | TCCCTGTGGTCCCCGCAGATGACAGCACACTTTGGATaGCAATCTATACAGAGGGACTTCTATAAACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SLWSPQMTAHFG*QSIQRDFYKQS Trigger: GGACTGTTTATAGAAGTCCCTCTGTATAGATTGGCATCCAAAGTGTGCTGTCATCTGCGGGGACCACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | TGTGGCCAGGTGAGACATCAGCCTGAGTGCCTGCATTaGGTGCTCAATGATCTTCACTTCTTCCTTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CGQVRHQPECLH*VLNDLHFFLVL Trigger: AAGGACAAGGAAGAAGTGAAGATCATTGAGCACCAAATGCAGGCACTCAGGCTGATGTCTCACCTGGCCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | TCATCCCTGATAGGGACAATAAAACAGTGGGGCCCTTaGGACTTTCCCTCAATGATGAGTTGGGCGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SSLIGTIKQWGP*DFPSMMSWAKT Trigger: TGTCTTCGCCCAACTCATCATTGAGGGAAAGTCTCAAGGGCCCCACTGTTTTATTGTCCCTATCAGGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CCA 72 bp | GCTATCATCAGTCCAAGCTTCATGGCGCCCAAAGCTTaGAAAGTCACTGCTAGTCTTGAAGGAGTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: AIISPSFMAPKA*KVTASLEGVSV Trigger: AACACTGACTCCTTCAAGACTAGCAGTGACTTTCCAAGCTTTGGGCGCCATGAAGCTTGGACTGATGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | TTCATCCCTGATAGGGACAATAAAACAGTGGGGCCCTaGAGACTTTCCCTCAATGATGAGTTGGGCGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FIPDRDNKTVGP*RLSLNDELGED Trigger: GTCTTCGCCCAACTCATCATTGAGGGAAAGTCTCAAGGGCCCCACTGTTTTATTGTCCCTATCAGGGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 72 bp | CCCCTCTCAGTCATTGCAAACATCCCAGTATACTTCTaGTCCTTGAGTGGCCAAAACCACTTGGTAACATGT | + |
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Preference number: 6 (lower is better) Translates to: PLSVIANIPVYF*SLSGQNHLVTC Trigger: ACATGTTACCAAGTGGTTTTGGCCACTCAAGGAGCAGAAGTATACTGGGATGTTTGCAATGACTGAGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 72 bp | CAAACTCCGCTGAAGAACCCTTTCTCGAAAATTCACTaGTTTCAGCAGAAAGGCAAGACATCCTACCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QTPLKNPFSKIH*FQQKGKTSYRV Trigger: GACACGGTAGGATGTCTTGCCTTTCTGCTGAAAGCAGTGAATTTTCGAGAAAGGGTTCTTCAGCGGAGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 72 bp | AGTCCCCCTTCTTGGTCACCACCTTATAGTAAATTCTaGACACCAAACTCCGCTGAAGAACCCTTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: SPPSWSPPYSKF*TPNSAEEPFLE Trigger: TTCGAGAAAGGGTTCTTCAGCGGAGTTTGGTGTCCAGAATTTACTATAAGGTGGTGACCAAGAAGGGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS CCA 72 bp | GTCAGGTATTTATGTTCTAAGTACCAGCCTCGCTCCTaGAACACCAGCTTCGTTCCATACAGCAGACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: VRYLCSKYQPRS*NTSFVPYSRQN Trigger: GTTTTGTCTGCTGTATGGAACGAAGCTGGTGTTCCAGGAGCGAGGCTGGTACTTAGAACATAAATACCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028859.8 ENSMUST00000110344.2 |
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| CDS TCA 72 bp | GTTGCCAGGATCGCATTGAATCTTGCGTTCTTGCTTTaGATAGGTGAATGGTATTGTCCATCTGGAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: VARIALNLAFLL*IGEWYCPSGVT Trigger: TGTGACTCCAGATGGACAATACCATTCACCTATTCAAAGCAAGAACGCAAGATTCAATGCGATCCTGGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | CCAGTATACTTCTGCTCCTTGAGTGGCCAAAACCACTaGGTAACATGTTCAGGACTTCCAAGATTGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: PVYFCSLSGQNH*VTCSGLPRLLI Trigger: AATCAGCAATCTTGGAAGTCCTGAACATGTTACCAAGTGGTTTTGGCCACTCAAGGAGCAGAAGTATACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS GCA 72 bp | AAAATTCCGTTATCCACACCATTCATACCCTCTTTGTaGATCATGTCAATAGCTGTCACTCCTGGGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: KIPLSTPFIPSL*IMSIAVTPGYK Trigger: CTTGTACCCAGGAGTGACAGCTATTGACATGATGCACAAAGAGGGTATGAATGGTGTGGATAACGGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | ATCAAAATTCCGTTATCCACACCATTCATACCCTCTTaGTGCATCATGTCAATAGCTGTCACTCCTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: IKIPLSTPFIPS*CIMSIAVTPGY Trigger: GTACCCAGGAGTGACAGCTATTGACATGATGCACAAAGAGGGTATGAATGGTGTGGATAACGGAATTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 90 bp | ACAGAACCAAACTTATCCAGCAGGTTCTCTCTGGGAATCCGAACCTaGTCAAATATCAAAATTCCGTTATCCACACCATTCATACCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TEPNLSSRFSLGIRT*SNIKIPLSTPFIPS Trigger: AGAGGGTATGAATGGTGTGGATAACGGAATTTTGATATTTGACAAGGTTCGGATTCCCAGAGAGAACCTGCTGGATAAGTTTGGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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| CDS CAA 72 bp | AACTTATCCAGCAGGTTCTCTCTGGGAATCCGAACCTaGTCAAATATCAAAATTCCGTTATCCACACCATTC | + |
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Preference number: 6 (lower is better) Translates to: NLSSRFSLGIRT*SNIKIPLSTPF Trigger: GAATGGTGTGGATAACGGAATTTTGATATTTGACAAGGTTCGGATTCCCAGAGAGAACCTGCTGGATAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028859.8 |
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