RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOX3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029098

Ensembl transcript IDs: ENSMUST00000068563.12, ENSMUST00000068947.14, ENSMUST00000114237.8, ENSMUST00000114238.5, ENSMUST00000156125.8, ENSMUST00000201106.3, ENSMUST00000202266.4

Found 434 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGCCTGCTGGGCGGGCCTGGGAAGGGGGCACTGCTTCCTTAGGCTaGACAGTGTGTGCAGTCACCCTGCCAGGCAGGACCTCGCCACCA +
Preference number: 1 (lower is better)
Translates to: MPAGRAWEGGTASLG*TVCAVTLPGRTSPP
Trigger: TGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCACACACTGTTCAGCCTAAGGAAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR TCA 90 bp AGTGTGTGCAGTCACCCTGCCAGGCAGGACCTCGCCACCACGGACTaGGCTGCAGCACTCAGAAACACAAGTTCCTCTCCATCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: SVCSHPARQDLATTD*AAALRNTSSSPSSL
Trigger: CAGAGAGGATGGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCACACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 90 bp GCCACTCAGGCAGCATCAAAGGTAGGCAAGCCTGCTGCTGTGAAATaGTTCCACCCTCAGGACAGGAAGTCTCCTGCCTTCCTGGGGAAG +
Preference number: 1 (lower is better)
Translates to: ATQAASKVGKPAAVK*FHPQDRKSPAFLGK
Trigger: CTTCCCCAGGAAGGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCCTACCTTTGATGCTGCCTGAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 90 bp GAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTaGCCAGATCTGACACCTGCTGCGGACAATGGACACCTTGGGCAG +
Preference number: 1 (lower is better)
Translates to: EDGMDAMQEAGPDHT*PDLTPAADNGHLGQ
Trigger: CTGCCCAAGGTGTCCATTGTCCGCAGCAGGTGTCAGATCTGGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 90 bp CCTCAGGACAGGAAGTCTCCTGCCTTCCTGGGGAAGTGCATCATTTaGCAGCCTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTG +
Preference number: 1 (lower is better)
Translates to: PQDRKSPAFLGKCII*QPWVCVLSQICWPL
Trigger: CAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCTGTCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 90 bp GACATACAGGTGAGCCACTCAGGCAGCATCAAAGGTAGGCAAGCCTaGTGCTGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTGC +
Preference number: 1 (lower is better)
Translates to: DIQVSHSGSIKGRQA*CCEMLPPSGQEVSC
Trigger: GCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCCTACCTTTGATGCTGCCTGAGTGGCTCACCTGTATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR TCA 90 bp AGTCCTACAGCAGAGGCTACAGCATGGGTCCCAGCAAGCCTCTTCTaGGAGCTAGCCACATGCAAGGACATATGCTTATGTGCCAGCCAC +
Preference number: 1 (lower is better)
Translates to: SPTAEATAWVPASLF*ELATCKDICLCASH
Trigger: GTGGCTGGCACATAAGCATATGTCCTTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGGGACCCATGCTGTAGCCTCTGCTGTAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR TCA 90 bp CTGTGCACAGAGGCTCAAACAAGGATGAAAAGCCAGGACCGACCCTaGCCTCCACAGGTACACTGGGGCAGACATATACCTGCACTCACA +
Preference number: 1 (lower is better)
Translates to: LCTEAQTRMKSQDRP*PPQVHWGRHIPALT
Trigger: TGTGAGTGCAGGTATATGTCTGCCCCAGTGTACCTGTGGAGGTCAGGGTCGGTCCTGGCTTTTCATCCTTGTTTGAGCCTCTGTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 90 bp ATACAGGTGAGCCACTCAGGCAGCATCAAAGGTAGGCAAGCCTGCTaGTGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTGCCTT +
Preference number: 1 (lower is better)
Translates to: IQVSHSGSIKGRQAC*CEMLPPSGQEVSCL
Trigger: AAGGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCCTACCTTTGATGCTGCCTGAGTGGCTCACCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 90 bp AGCTGTAATGTCAGTGGTTTTCAGCGTAGGCATCTGGGTGTCTCTTaGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTG +
Preference number: 1 (lower is better)
Translates to: SCNVSGFQRRHLGVS*SSVSGSRPLDQLFL
Trigger: CAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGACACCCAGATGCCTACGCTGAAAACCACTGACATTACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR CCA 90 bp AGAGCAGCGAGGACCCAAAAGGACCTAAGACCTAGTCCTCGTTGTTaGGAAAAGCCATGGATCCAGGTGGAAGGCGTCATCTGTGGACAC +
Preference number: 1 (lower is better)
Translates to: RAARTQKDLRPSPRC*EKPWIQVEGVICGH
Trigger: GTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTCCTTTTGGGTCCTCGCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTCCTACAGCAGAGTAGGAGGGAGAGACACACCCACCTACTGT +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVCV*SYSRVGGRDTPTYC
Trigger: ACAGTAGGTGGGTGTGTCTCTCCCTCCTACTCTGCTGTAGGAGCACACACACACACACACACACACACACACACACACACACACACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 90 bp TGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATaGTCAACATACCAGTGGCTCTTAAAGAAAACTGACTCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: CATHMLLRVWARNGA*STYQWLLKKTDSPS
Trigger: GGAGGGAGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 90 bp ACCCAAAAGGACCTAAGACCTAGTCCTCGTTGTTGGGAAAAGCCATaGATCCAGGTGGAAGGCGTCATCTGTGGACACATGGCTCTCATG +
Preference number: 1 (lower is better)
Translates to: TQKDLRPSPRCWEKP*IQVEGVICGHMALM
Trigger: CATGAGAGCCATGTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTCCTTTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR GCA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTaGAAATCCCTCGCAAATACCCCATTTGAGGATGGGTACAACAGG +
Preference number: 1 (lower is better)
Translates to: TKSFVKFQGPQGDTL*KSLANTPFEDGYNR
Trigger: CCTGTTGTACCCATCCTCAAATGGGGTATTTGCGAGGGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR TCA 90 bp AAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGAGCCCTaGGATAGCATAACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAG +
Preference number: 1 (lower is better)
Translates to: KAFIVSPDFTFLSEP*DSITKSFVKFQGPQ
Trigger: CTGAGGGCCTTGGAATTTAACAAAGGACTTAGTTATGCTATCTCAGGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR-3UTR CCA 90 bp CATTGCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTGCTCGTCCACGTGGCCTGCTGGGCGGGCCTaGGAAGGGGGCACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: HCHKAALLPKRPDCSSTWPAGRA*EGGTAS
Trigger: GGAAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGG...CCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGCAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR TCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCACAAGCCAGGTATGGCTaGAGAGCAGGAGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSQARYG*RAGGWG
Trigger: GCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTG...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
3UTR-3UTR CCA 90 bp GGCAAGCCTGCTGCTGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTGCCAGTGATGGAGACCCTTaGGGGCGGAGGGAGGACCAC +
Preference number: 2 (lower is better)
Translates to: GKPAAVKCFHPQDRKSPASDGDP*GRREDH
Trigger: GTGGTCCTCCCTCCGCCCCCAAGGGTCTCCATCACT...GGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR TCA 90 bp ACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACACTCGCCACCACGGACTaGGCTGCAGCACTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: TLTSHGLSSLSPVPSYPTLATTD*AAALRN
Trigger: GTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAG...TGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR TCA 90 bp CATTGCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTGCTCGTCCACGTGGCTGAGCTTGCACTCCTaGAGCCATGCCTGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: HCHKAALLPKRPDCSSTWLSLHS*SHACWA
Trigger: CGCCCAGCAGGCATGGCTTCAGGAGTGCAAGCTCAG...CCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR CCA 90 bp GTGACCACTGCCTGGCAGGGTGGGAGGGTAGAGATTCCAAGAGCAGCGAGGACCTTGGAGCTCTGTGTCTaGGTCCAGGCCTCTGGATCA +
Preference number: 2 (lower is better)
Translates to: VTTAWQGGRVEIPRAARTLELCV*VQASGS
Trigger: TGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAA...GGTCCTCGCTGCTCTTGGAATCTCTACCCTCCCACCCTGCCAGGCAGTGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR GCA 90 bp ACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAACGGAATGGATGCCATaGAGGAGGCAGGTCCAGATC +
Preference number: 2 (lower is better)
Translates to: TLTSHGLSSLSPVPSYPTTEWMP*RRQVQI
Trigger: GATCTGGACCTGCCTCCTGCATGGCATCCATTCCGT...TGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR CCA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTTGCACAAGCCAGGTATaGCTGAAGAGCAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPCTSQV*LKSRRL
Trigger: CAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCA...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
3UTR-3UTR TCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAACTGCTTCCTTAGGCTaGACAGTGTGTGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSTASLG*TVCAVT
Trigger: GGTGACTGCACACACTGTTCAGCCTAAGGAAGCAGT...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR GCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCAAGGCTGAACAGTGTGTaGAGTCACCCTGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSRLNSV*SHPARQ
Trigger: CTGCCTGGCAGGGTGACTGCACACACTGTTCAGCCT...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR CAA 90 bp GGGTCTGGCTATGGCCAGTGTAGCAGGGTCATGCCGTGTGTGAATTaGCTGAAGGATGAAAGCCACTGCCAAGCAGTCACTGACACAGCG +
Preference number: 2 (lower is better)
Translates to: GSGYGQCSRVMPCVN*LKDESHCQAVTDTA
Trigger: CGCTGTGTCAGTGACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCATGACCCTGCTACACTGGCCATAGCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CAA 90 bp CCCTCAGGACAGGAAGTCTCCTGCCTTCCTGGGGAAGTGCATCATTaGCCAGCCTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: PSGQEVSCLPGEVHH*PALGLCALTDLLAF
Trigger: AAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCTGTCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR TCA 90 bp TCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATGAAGAAGAACAGGTGGTaGAGAGAGAGGCTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: STLCHPYALACVGTQWSMKKNRW*RERLSG
Trigger: GCCTGAGAGCCTCTCTCTTCACCACCTGTTCTTCTT...CATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR TCA 90 bp ACCCTGACCTCCACAGGTACACTGGGGCAGACATATACCTGCACTCACACACACCCAGCAAGCCTCTTCTaGGAGCTAGCCACATGCAAG +
Preference number: 2 (lower is better)
Translates to: TLTSTGTLGQTYTCTHTHPASLF*ELATCK
Trigger: CTTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGG...GTGTGTGTGAGTGCAGGTATATGTCTGCCCCAGTGTACCTGTGGAGGTCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR CCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCACCTGCTGCGGACAATaGACACCTTGGGCAGACGCA +
Preference number: 2 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGTCCGQ*TPWADA
Trigger: TGCGTCTGCCCAAGGTGTCCATTGTCCGCAGCAGGT...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR CCA 90 bp GACCTAAGACCTAGTCCTCGTTGTTGGGAAAAGCCATGGATCCAGGTGGAAGGCGTGGGATCCTGCCTATaGCAGGAAGGGGTGGCATCT +
Preference number: 2 (lower is better)
Translates to: DLRPSPRCWEKPWIQVEGVGSCL*QEGVAS
Trigger: AGATGCCACCCCTTCCTGCCATAGGCAGGATCCCAC...GCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR CCA 90 bp GGCAAGCCTGCTGCTGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTGCCCTCTCACAGATCTGCTaGCCTTTGGGCTTACGCAAT +
Preference number: 2 (lower is better)
Translates to: GKPAAVKCFHPQDRKSPALSQIC*PLGLRN
Trigger: ATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAG...GGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR TCA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGATGGGTACAACAGGCTaGCCAGGGTCGAGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: REVWPPHSRVKESDSSREMGTTG*PGSRRS
Trigger: GCTTCTCCTCGACCCTGGTCAGCCTGTTGTACCCAT...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR-3UTR GCA 90 bp TGGGATATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCACCACGGACTGAGCTaGAGCACTCAGAAACACAAG +
Preference number: 2 (lower is better)
Translates to: WDIPIAATPTSIPFPHLHHHGLS*STQKHK
Trigger: CTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTG...GTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR GCA 90 bp AGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTGGCCATAAAGCTGCCCTCCTaGCTAAGAGACCTGACTGCT +
Preference number: 2 (lower is better)
Translates to: RGRRNGCHAGGRSRSYLAIKLPS*LRDLTA
Trigger: AGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTAT...GGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR-3UTR GCA 90 bp AGGGCTCGAGGCACAAGCATGGAGACCCTAGTTCAGATCCCCAGAGCCCACATCAAAGGTAGGCAAGCCTaGTGCTGTGAAATGCTTCCA +
Preference number: 2 (lower is better)
Translates to: RARGTSMETLVQIPRAHIKGRQA*CCEMLP
Trigger: TGGAAGCATTTCACAGCAGCAGGCTTGCCTACCTTT...GATGTGGGCTCTGGGGATCTGAACTAGGGTCTCCATGCTTGTGCCTCGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR GCA 90 bp ACCCTGACCTCCACAGGTACACTGGGGCAGACATATACCTGCACTCACACACACGGGAAGTGCATCATTTaGCAGCCTTGGGTTTGTGTG +
Preference number: 2 (lower is better)
Translates to: TLTSTGTLGQTYTCTHTHGKCII*QPWVCV
Trigger: CACACAAACCCAAGGCTGGCAAATGATGCACTTCCC...GTGTGTGTGAGTGCAGGTATATGTCTGCCCCAGTGTACCTGTGGAGGTCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR TCA 90 bp TCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATGGCTCTTAAAGAAAACTaGCTCTCCCTCCTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: STLCHPYALACVGTQWSMALKEN*LSLLSE
Trigger: TTCTGAGAGGAGGGAGAGTCAGTTTTCTTTAAGAGC...CATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR CCA 90 bp ACCCTGACCTCCACAGGTACACTGGGGCAGACATATACCTGCACTCACACACACAGATCTGCTGGCCTTTaGGCTTACGCAATGCAACAA +
Preference number: 2 (lower is better)
Translates to: TLTSTGTLGQTYTCTHTHRSAGL*AYAMQQ
Trigger: TTGTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCT...GTGTGTGTGAGTGCAGGTATATGTCTGCCCCAGTGTACCTGTGGAGGTCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR CCA 90 bp TCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATGCTTCTTGTGACATACTaGTCAGTCTCCAATCAGACA +
Preference number: 2 (lower is better)
Translates to: STLCHPYALACVGTQWSMLLVTY*SVSNQT
Trigger: TGTCTGATTGGAGACTGACCAGTATGTCACAAGAAG...CATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR TCA 90 bp GGAAAAGCCATGGATCCAGGTGGAAGGCGTCATCTGTGGACACATGGCTCTCATTTCCTATCTGAGCCCTaGGATAGCATAACTAAGTCC +
Preference number: 2 (lower is better)
Translates to: GKAMDPGGRRHLWTHGSHFLSEP*DSITKS
Trigger: GGACTTAGTTATGCTATCTCAGGGCTCAGATAGGAA...ATGAGAGCCATGTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR GCA 90 bp CTTCTGTGGGAGCATTTTTCTCAGCGGAAACTTCTGGTGCCACCAGAGGAGTTACAGGGAGACACACTGTaGAAATCCCTCGCAAATACC +
Preference number: 2 (lower is better)
Translates to: LLWEHFSQRKLLVPPEELQGDTL*KSLANT
Trigger: GGTATTTGCGAGGGATTTGCACAGTGTGTCTCCCTG...TAACTCCTCTGGTGGCACCAGAAGTTTCCGCTGAGAAAAATGCTCCCACAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR GCA 90 bp GCACGCAATGGAGCATGCTCAACATACCAGTGGCTCTTAAAGAAAACTGACTCTAAGGATGAAAGCCACTaGCAAGCAGTCACTGACACA +
Preference number: 2 (lower is better)
Translates to: ARNGACSTYQWLLKKTDSKDESH*QAVTDT
Trigger: TGTGTCAGTGACTGCTTGGCAGTGGCTTTCATCCTT...AGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR GCA 90 bp CTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACATACACTACTCAGATaGACAGACACACTTCATACA +
Preference number: 2 (lower is better)
Translates to: LGFVCSHRSAGLWAYAMQHTLLR*TDTLHT
Trigger: TGTATGAAGTGTGTCTGTGCATCTGAGTAGTGTATG...TTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR GCA 90 bp TTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGAACAAATGCCTTCCTGGGGAAGTaGATCATTTGCCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: FLKAAAKDRCHHRAARTNAFLGK*IICQPW
Trigger: CCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGC...ATTTGTTCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR CCA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGAAGTCTCCTGCCTTCCTaGGGAAGTGCATCATTTGCC +
Preference number: 2 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARSLLPS*GSASFA
Trigger: GGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACT...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR CCA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGCATCTGGGTGTCTCTTaGAGCTCTGTGTCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRHLGVS*SSVSGS
Trigger: GGACCCAGACACAGAGCTCCAAGAGACACCCAGATG...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR-3UTR TCA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGTTCCTATCTGAGCCCTaGGATAGCATAACTAAGTCC +
Preference number: 2 (lower is better)
Translates to: VKESDSSREKSVSQKSSTFLSEP*DSITKS
Trigger: GGACTTAGTTATGCTATCTCAGGGCTCAGATAGGAA...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR-3UTR GCA 90 bp TTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGAACAAATTTTGGGCTTACGCAATaGAACAAGGGGCCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: FLKAAAKDRCHHRAARTNFGLTQ*NKGPFL
Trigger: AAGGAAAGGCCCCTTGTTGCATTGCGTAAGCCCAAA...ATTTGTTCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR TCA 72 bp GGGCGGGCCTGGGAAGGGGGCACTGCTTCCTTAGGCTaGACAGTGTGTGCAGTCACCCTGCCAGGCAGGACC +
Preference number: 3 (lower is better)
Translates to: GRAWEGGTASLG*TVCAVTLPGRT
Trigger: GGTCCTGCCTGGCAGGGTGACTGCACACACTGTTCAGCCTAAGGAAGCAGTGCCCCCTTCCCAGGCCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR TCA 72 bp ACTTGGCCATGTTCCACGGTGCTGAGCTTGCACTCCTaGAGCCATGCCTGCTGGGCGGGCCTGGGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: TWPCSTVLSLHS*SHACWAGLGRG
Trigger: CCCCCTTCCCAGGCCCGCCCAGCAGGCATGGCTTCAGGAGTGCAAGCTCAGCACCGTGGAACATGGCCAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp GGAAGGGGGCACTGCTTCCTTAGGCTGAACAGTGTGTaGAGTCACCCTGCCAGGCAGGACCTCGCCACCACG +
Preference number: 3 (lower is better)
Translates to: GRGHCFLRLNSV*SHPARQDLATT
Trigger: CGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCACACACTGTTCAGCCTAAGGAAGCAGTGCCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp AGCCATGCCTGCTGGGCGGGCCTGGGAAGGGGGCACTaGTTCCTTAGGCTGAACAGTGTGTGCAGTCACCCT +
Preference number: 3 (lower is better)
Translates to: SHACWAGLGRGH*FLRLNSVCSHP
Trigger: AGGGTGACTGCACACACTGTTCAGCCTAAGGAAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGCATGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp ATGTTCCACGGTGCTGAGCTTGCACTCCTGAAGCCATaGCTGCTGGGCGGGCCTGGGAAGGGGGCACTGCTT +
Preference number: 3 (lower is better)
Translates to: MFHGAELALLKP*LLGGPGKGALL
Trigger: AAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGCATGGCTTCAGGAGTGCAAGCTCAGCACCGTGGAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp CCCTGCCAGGCAGGACCTCGCCACCACGGACTGAGCTaGAGCACTCAGAAACACAAGTTCCTCTCCATCCTC +
Preference number: 3 (lower is better)
Translates to: PCQAGPRHHGLS*STQKHKFLSIL
Trigger: GAGGATGGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR CCA 72 bp CAGCTGGCAGGCCCCTATTCAACTGGGGTAGGACTCTaGGAGGATGCTGAGCCAGGGCGGTGTGTGTGTATG +
Preference number: 3 (lower is better)
Translates to: QLAGPYSTGVGL*EDAEPGRCVCM
Trigger: CATACACACACACCGCCCTGGCTCAGCATCCTCCCAGAGTCCTACCCCAGTTGAATAGGGGCCTGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR TCA 72 bp AGTCACCCTGCCAGGCAGGACCTCGCCACCACGGACTaGGCTGCAGCACTCAGAAACACAAGTTCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SHPARQDLATTD*AAALRNTSSSP
Trigger: TGGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR CCA 72 bp GTGTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTaGATCAGCTGTTCCTGCTGTAACCGCCCCTCCAAC +
Preference number: 3 (lower is better)
Translates to: VSLGALCLGPGL*ISCSCCNRPSN
Trigger: GTTGGAGGGGCGGTTACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR GCA 72 bp TCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAGGATaGACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: SEPCPQLPYSSG*TSQVWLKSRRL
Trigger: CAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTGGGGACAGGGCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
3UTR GCA 72 bp AATGTAGCCTCTACCCATAGGCCCCCACATGCCACCTaGCTCACCCTTGGGACTGAGGAGGGGAGTATACAC +
Preference number: 3 (lower is better)
Translates to: NVASTHRPPHAT*LTLGTEEGSIH
Trigger: GTGTATACTCCCCTCCTCAGTCCCAAGGGTGAGGCAGGTGGCATGTGGGGGCCTATGGGTAGAGGCTACATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp TCATACCTGGCCAGATCTGACACCTGCTGCGGACAATaGACACCTTGGGCAGACGCAGCTAGGGTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: SYLARSDTCCGQ*TPWADAARVEP
Trigger: TGGCTCTACCCTAGCTGCGTCTGCCCAAGGTGTCCATTGTCCGCAGCAGGTGTCAGATCTGGCCAGGTATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp CCTTGGGCAGACGCAGCTAGGGTAGAGCCACAACATTaGCATAAAGCTGCCCTCCTGCCTAAGAGACCTGAC +
Preference number: 3 (lower is better)
Translates to: PWADAARVEPQH*HKAALLPKRPD
Trigger: GTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGCAATGTTGTGGCTCTACCCTAGCTGCGTCTGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR CCA 72 bp GTCAGTGGTTTTCAGCGTAGGCATCTGGGTGTCTCTTaGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAG +
Preference number: 3 (lower is better)
Translates to: VSGFQRRHLGVS*SSVSGSRPLDQ
Trigger: CTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGACACCCAGATGCCTACGCTGAAAACCACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR TCA 72 bp CCCCTATTCAACTGGGGTAGGACTCTGGGAGGATGCTaGGCCAGGGCGGTGTGTGTGTATGACCAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: PLFNWGRTLGGC*ARAVCVYDQEE
Trigger: TTCTTCTTGGTCATACACACACACCGCCCTGGCTCAGCATCCTCCCAGAGTCCTACCCCAGTTGAATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR GCA 72 bp TGCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTaGTCGTCCACGTGGTGTGAACTTGGCCATGTTCCA +
Preference number: 3 (lower is better)
Translates to: CHKAALLPKRPD*SSTWCELGHVP
Trigger: TGGAACATGGCCAAGTTCACACCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
3UTR GCA 72 bp CCTCAGGACAGGAAGTCTCCTGCCTTCCTGGGGAAGTaGATCATTTGCCAGCCTTGGGTTTGTGTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: PQDRKSPAFLGK*IICQPWVCVLS
Trigger: TGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCTGTCCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp GCAGCATCAAAGGTAGGCAAGCCTGCTGCTGTGAAATaGTTCCACCCTCAGGACAGGAAGTCTCCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: AASKVGKPAAVK*FHPQDRKSPAF
Trigger: GAAGGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCCTACCTTTGATGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 72 bp CGAATGGTGTGGGATCCTGCCTATGGCAGGAAGGGGTaGCATCTATGTCTTTCAGAAGTACGAGGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: RMVWDPAYGRKG*HLCLSEVRGSG
Trigger: GCCAGACCCTCGTACTTCTGAAAGACATAGATGCCACCCCTTCCTGCCATAGGCAGGATCCCACACCATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp AGTCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTaGGCACGCAATGGAGCATGCTCAACATACCAGTGG +
Preference number: 3 (lower is better)
Translates to: SPLCATHMLLRV*ARNGACSTYQW
Trigger: CCACTGGTATGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp TGCCAGCCTTGGGTTTGTGTGCTCTCACAGATCTGCTaGCCTTTGGGCTTACGCAATGCAACAAGGGGCCTT +
Preference number: 3 (lower is better)
Translates to: CQPWVCVLSQIC*PLGLRNATRGL
Trigger: AAGGCCCCTTGTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 72 bp CCTGCCTTCCTGGGGAAGTGCATCATTTGCCAGCCTTaGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTG +
Preference number: 3 (lower is better)
Translates to: PAFLGKCIICQP*VCVLSQICWPL
Trigger: CAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR-3UTR CAA 90 bp GAAAAGGGCTCGAGGCACAAGCATGGAGACCCTAGTTCAGATCCCCAGAGCCCACATCATTTGCCAGCCTaGGGTTTGTGTGCTCTCACA +
Preference number: 3 (lower is better)
Translates to: EKGSRHKHGDPSSDPQSPHHLPA*GLCALT
Trigger: TGTGAGAGCACACAAACCCAAGGCTGGCAAATGATG...TGGGCTCTGGGGATCTGAACTAGGGTCTCCATGCTTGTGCCTCGAGCCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp AGCCATCAAGTCCACTCTGTGCCACCCATATGCTCTTaGGTGTGTGGGCACGCAATGGAGCATGCTCAACAT +
Preference number: 3 (lower is better)
Translates to: SHQVHSVPPICS*VCGHAMEHAQH
Trigger: ATGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGACTTGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR GCA 72 bp TGGGGAAGTGCATCATTTGCCAGCCTTGGGTTTGTGTaGTCTCACAGATCTGCTGGCCTTTGGGCTTACGCA +
Preference number: 3 (lower is better)
Translates to: WGSASFASLGFV*SHRSAGLWAYA
Trigger: TGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp AGGAAGTCTCCTGCCTTCCTGGGGAAGTGCATCATTTaGCAGCCTTGGGTTTGTGTGCTCTCACAGATCTGC +
Preference number: 3 (lower is better)
Translates to: RKSPAFLGKCII*QPWVCVLSQIC
Trigger: GCAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp TGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTaGCTTCCTGGGGAAGTGCATCATTTGCCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: CEMLPPSGQEVS*LPGEVHHLPAL
Trigger: CAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp CAGCAGAGTAGGAGGGAGAGACACACCCACCTACTGTaGACAGAGGCTCAAACAAGGATGAAAAGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: QQSRRERHTHLL*TEAQTRMKSQD
Trigger: GTCCTGGCTTTTCATCCTTGTTTGAGCCTCTGTGCACAGTAGGTGGGTGTGTCTCTCCCTCCTACTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTCCTACAGCAGAGTAGGAGGGAGAGACACACCC +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVCV*SYSRVGGRDTP
Trigger: GGGTGTGTCTCTCCCTCCTACTCTGCTGTAGGAGCACACACACACACACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 72 bp GAAGCTGTAATGTCAGTGGTTTTCAGCGTAGGCATCTaGGTGTCTCTTGGAGCTCTGTGTCTGGGTCCAGGC +
Preference number: 3 (lower is better)
Translates to: EAVMSVVFSVGI*VSLGALCLGPG
Trigger: GCCTGGACCCAGACACAGAGCTCCAAGAGACACCCAGATGCCTACGCTGAAAACCACTGACATTACAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR CCA 72 bp TGTGTCTGTGGTCCCCACCACCATGCACGTCTTCTGTaGGAGCATTTTTCTCAGCGGAAACTTCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: CVCGPHHHARLL*EHFSQRKLLVP
Trigger: TGGCACCAGAAGTTTCCGCTGAGAAAAATGCTCCCACAGAAGACGTGCATGGTGGTGGGGACCACAGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR TCA 72 bp GCAGAGGCTACAGCATGGGTCCCAGCAAGCCTCTTCTaGGAGCTAGCCACATGCAAGGACATATGCTTATGT +
Preference number: 3 (lower is better)
Translates to: AEATAWVPASLF*ELATCKDICLC
Trigger: ACATAAGCATATGTCCTTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGGGACCCATGCTGTAGCCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CCA 72 bp GCCCATCAGAAAGCGAATGGTGTGGGATCCTGCCTATaGCAGGAAGGGGTGGCATCTATGTCTTTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: AHQKANGVGSCL*QEGVASMSFRS
Trigger: ACTTCTGAAAGACATAGATGCCACCCCTTCCTGCCATAGGCAGGATCCCACACCATTCGCTTTCTGATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp GGAAAAGCCATGGATCCAGGTGGAAGGCGTCATCTGTaGACACATGGCTCTCATGTTTTACAGGGACTCCAG +
Preference number: 3 (lower is better)
Translates to: GKAMDPGGRRHL*THGSHVLQGLQ
Trigger: CTGGAGTCCCTGTAAAACATGAGAGCCATGTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp GACCTAAGACCTAGTCCTCGTTGTTGGGAAAAGCCATaGATCCAGGTGGAAGGCGTCATCTGTGGACACATG +
Preference number: 3 (lower is better)
Translates to: DLRPSPRCWEKP*IQVEGVICGHM
Trigger: CATGTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp AGGACCCAAAAGGACCTAAGACCTAGTCCTCGTTGTTaGGAAAAGCCATGGATCCAGGTGGAAGGCGTCATC +
Preference number: 3 (lower is better)
Translates to: RTQKDLRPSPRC*EKPWIQVEGVI
Trigger: GATGACGCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTCCTTTTGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR TCA 72 bp CATCATAGGGCAGCAAGAACAAATGAGGCTGGCTTATaGGGTGAGAGAGGACATACAGGTGAGCCACTCAGG +
Preference number: 3 (lower is better)
Translates to: HHRAARTNEAGL*GERGHTGEPLR
Trigger: CCTGAGTGGCTCACCTGTATGTCCTCTCTCACCTCATAAGCCAGCCTCATTTGTTCTTGCTGCCCTATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR GCA 72 bp ATGCCGTGTGTGAATTTGCTGAAGGATGAAAGCCACTaGCAAGCAGTCACTGACACAGCGGGATGTGTCTGT +
Preference number: 3 (lower is better)
Translates to: MPCVNLLKDESH*QAVTDTAGCVC
Trigger: ACAGACACATCCCGCTGTGTCAGTGACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp TGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATaGAGCATGCTCAACATACCAGTGGCTCTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: CHPYALACVGTQ*SMLNIPVALKE
Trigger: TTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp GGGGACCATGTGACGTATCTTAATGCAGCATTCTACTaGCCGTGGACACTTCTTGTGACATACTGGTCAGTC +
Preference number: 3 (lower is better)
Translates to: GDHVTYLNAAFY*PWTLLVTYWSV
Trigger: GACTGACCAGTATGTCACAAGAAGTGTCCACGGCCAGTAGAATGCTGCATTAAGATACGTCACATGGTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR CAA 90 bp CAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTCGCAAATACCCCATTaGAGGATGGGTACAACAGGC +
Preference number: 3 (lower is better)
Translates to: QTAAERRVCLKNLPRIPKSQIPH*RMGTTG
Trigger: GCCTGTTGTACCCATCCTCAAATGGGGTATTTGCGA...CTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR TCA 72 bp GATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTGTaGGCCCTGACTTTACCTTCCTATCTGAGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: DPKVHFSRRLSL*ALTLPSYLSPE
Trigger: CTCAGGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR GCA 72 bp TTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTaGAAATCCCTCGCAAATACCCCATTTGAGGATGGG +
Preference number: 3 (lower is better)
Translates to: FVKFQGPQGDTL*KSLANTPFEDG
Trigger: CCCATCCTCAAATGGGGTATTTGCGAGGGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR GCA 72 bp CATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATaGTCAACATACCAGTGGCTCTTAAAGAAAACTGAC +
Preference number: 3 (lower is better)
Translates to: HMLLRVWARNGA*STYQWLLKKTD
Trigger: GTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR-3UTR CAA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGTCGCAAATACCCCATTaGAGGATGGGTACAACAGGC +
Preference number: 3 (lower is better)
Translates to: VKESDSSREKSVSQKSSTSQIPH*RMGTTG
Trigger: GCCTGTTGTACCCATCCTCAAATGGGGTATTTGCGA...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
3UTR TCA 72 bp GGGACCAGGATACACCATTCATTTCTAGAAGTCATGTaGTATCACCCATCTAAGTCTGGTTGTCCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: GTRIHHSFLEVM*YHPSKSGCPES
Trigger: GCTCTCTGGACAACCAGACTTAGATGGGTGATATCACATGACTTCTAGAAATGAATGGTGTATCCTGGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR TCA 72 bp AGCATGCTCAACATACCAGTGGCTCTTAAAGAAAACTaGCTCTCCCTCCTCTCAGAAGCTATAGCTAAAGAT +
Preference number: 3 (lower is better)
Translates to: SMLNIPVALKEN*LSLLSEAIAKD
Trigger: ATCTTTAGCTATAGCTTCTGAGAGGAGGGAGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CCA 72 bp ATAAAGATCTTCAAATTACATCATTCTGATGGTTCATaGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTA +
Preference number: 3 (lower is better)
Translates to: IKIFKLHHSDGS*YRGVNGRYREV
Trigger: TACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGATCTTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp CTTGCACTCCTGAAGCCATGCCTGCTGGGCGGGCCTGGGAAGGGGGCACTGCTTAGGCTTGCCAGCCGATaGCAGAGCATGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: LALLKPCLLGGPGKGALLRLASR*QSMDLT
Trigger: CGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT...AAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGCATGGCTTCAGGAGTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR TCA 90 bp GACCACTGCCTGGCAGGGTGGGAGGGTAGAGATTCCAAGAGCAGCGAGGACCCATCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: DHCLAGWEGRDSKSSEDPSVGPN*HRVAEN
Trigger: GTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGA...TGGGTCCTCGCTGCTCTTGGAATCTCTACCCTCCCACCCTGCCAGGCAGTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR GCA 90 bp GTGCAGTCACCCTGCCAGGCAGGACCTCGCCACCACGGACTGAGCTGCAGCACTCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VQSPCQAGPRHHGLSCSTPSCPG*PPKIWQ
Trigger: CTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGG...AGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp GCCTGCTGGGCGGGCCTGGGAAGGGGGCACTGCTTCCTTAGGCTGAACAGTGTGGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ACWAGLGRGHCFLRLNSVADARA*ISRPSS
Trigger: AGAACTCGGACGTGAGATCCATGCTCTGGCATCGGC...CACACTGTTCAGCCTAAGGAAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAAGCAGGGCCATGTGCTaGCTCAGGCACCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSSRAMC*LRHHRP
Trigger: CGGCCTGTGGTGCCTGAGCCAGCACATGGCCCTGCT...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCGCAGCTCCCCAGAGTTaGAGGAGGCTCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSAAPQS*RRLLLG
Trigger: ACCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGC...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR TCA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGGCAGCTCCCCAGAGTTaGAGGAGGCTCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLAAPQS*RRLLLG
Trigger: ACCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGC...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAANTTA*VAVLPR
Trigger: CCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGC...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp ACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLTSHGLSSLSPVPSYPTANTTA*VAVLPR
Trigger: CCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGC...TGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAGAGGCTCCAGGAGGCTaGGCAGGTAGTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSEAPGG*AGSCWS
Trigger: AGACCAGCAACTACCTGCTCAGCCTCCTGGAGCCTC...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCATGGCCGAGAACCGGATaGCTATGGACACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAWPRTG*LWTRPA
Trigger: AGCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCA...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp ACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGTGGCCGAGAACCGGATaGCTATGGACACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLQLRMHKPGMAEEQEAGWPRTG*LWTRPA
Trigger: AGCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCA...CCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp TCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATGGCAGCTCCCCAGAGTTaGAGGAGGCTCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: STLCHPYALACVGTQWSMAAPQS*RRLLLG
Trigger: ACCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGC...CATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR TCA 90 bp GAAAAGGGCTCGAGGCACAAGCATGGAGACCCTAGTTCAGATCCCCAGAGCCCATCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EKGSRHKHGDPSSDPQSPSVGPN*HRVAEN
Trigger: GTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGA...TGGGCTCTGGGGATCTGAACTAGGGTCTCCATGCTTGTGCCTCGAGCCCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTAGGCTTGCCAGCCGATaGCAGAGCATGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPRLASR*QSMDLT
Trigger: CGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCGTGCTCAGTTCCTTCTaGAGGCAACAGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSVLSSF*RQQALH
Trigger: ATGCAGGGCCTGTTGCCTGCAGAAGGAACTGAGCAC...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCACGGAATGGATGCCATaGAGGAGGCAGGTCCAGATC +
Preference number: 4 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSTEWMP*RRQVQI
Trigger: GATCTGGACCTGCCTCCTGCATGGCATCCATTCCGT...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAGGAAGACGGAATGGATaGCATGCAGGAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSGRRNG*HAGGRS
Trigger: GGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCC...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACGGAGGACGCATTTGTTaGCCAGGGACCAGTCGTACA +
Preference number: 4 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYGGRIC*PGTSRT
Trigger: TGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCC...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCGGAGGACGCATTTGTTaGCCAGGGACCAGTCGTACA +
Preference number: 4 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSGGRIC*PGTSRT
Trigger: TGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCC...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp GCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTGCTCGTCCACGTGGTGTGCCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: AIKLPSCLRDLTARPRGVPSPPS*EAGSSC
Trigger: ACACGAAGACCCTGCTTCCCATGACGGGGGTGATGG...CACACCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp TACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAGCCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: YSSGCTSQVWLKSRRLGQPSPPS*EAGSSC
Trigger: ACACGAAGACCCTGCTTCCCATGACGGGGGTGATGG...CTGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp AGGGCTCGAGGCACAAGCATGGAGACCCTAGTTCAGATCCCCAGAGCCCACATCCCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: RARGTSMETLVQIPRAHIPSPPS*EAGSSC
Trigger: ACACGAAGACCCTGCTTCCCATGACGGGGGTGATGG...GATGTGGGCTCTGGGGATCTGAACTAGGGTCTCCATGCTTGTGCCTCGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCTCCAGTCAGCCTTGCTaGAGCCCAGGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSSSQPC*SPGTSG
Trigger: GCCAGAAGTTCCTGGGCTCCAGCAAGGCTGACTGGA...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp ACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACATCCAGTCAGCCTTGCTaGAGCCCAGGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLTSHGLSSLSPVPSYPTSSQPC*SPGTSG
Trigger: GCCAGAAGTTCCTGGGCTCCAGCAAGGCTGACTGGA...TGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCCACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSHSPQR*RQTGAV
Trigger: CACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTG...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp GGAAAAGCCATGGATCCAGGTGGAAGGCGTCATCTGTGGACACATGGCTCTCATAGCAGGGCCATGTGCTaGCTCAGGCACCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: GKAMDPGGRRHLWTHGSHSRAMC*LRHHRP
Trigger: CGGCCTGTGGTGCCTGAGCCAGCACATGGCCCTGCT...ATGAGAGCCATGTGTCCACAGATGACGCCTTCCACCTGGATCCATGGCTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp GCCATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGAGCAGGGCCATGTGCTaGCTCAGGCACCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: AIKASLMGAIPYWDIPIASRAMC*LRHHRP
Trigger: CGGCCTGTGGTGCCTGAGCCAGCACATGGCCCTGCT...CGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp CAGTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGGCAGCTCCCCAGAGTTaGAGGAGGCTCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: QLPYSSGCTSQVWLKSRRAAPQS*RRLLLG
Trigger: ACCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGC...CCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp ACCCTGACCTCCACAGGTACACTGGGGCAGACATATACCTGCACTCACACACACGCAGCTCCCCAGAGTTaGAGGAGGCTCTTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: TLTSTGTLGQTYTCTHTHAAPQS*RRLLLG
Trigger: ACCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGC...GTGTGTGTGAGTGCAGGTATATGTCTGCCCCAGTGTACCTGTGGAGGTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR TCA 90 bp TGGGATATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACTCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: WDIPIAATPTSIPFPHLHSVGPN*HRVAEN
Trigger: GTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGA...GTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp TGCCTCACCCTTGGGACTGAGGAGGGGAGTATACACACACAGGAGCAGGGACCAGGAGGACGCATTTGTTaGCCAGGGACCAGTCGTACA +
Preference number: 4 (lower is better)
Translates to: CLTLGTEEGSIHTQEQGPGGRIC*PGTSRT
Trigger: TGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCC...TGGTCCCTGCTCCTGTGTGTGTATACTCCCCTCCTCAGTCCCAAGGGTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp ATGACAGCAGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGAGGAGGACGCATTTGTTaGCCAGGGACCAGTCGTACA +
Preference number: 4 (lower is better)
Translates to: MTAASVMQSQVMETLGGGGGRIC*PGTSRT
Trigger: TGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCC...TCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCTGCTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp AGAGGCTACAGCATGGGTCCCAGCAAGCCTCTTCTGAGAGCTAGCCACATGCAATGGCCGAGAACCGGATaGCTATGGACACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGYSMGPSKPLLRASHMQWPRTG*LWTRPA
Trigger: AGCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCA...TTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGGGACCCATGCTGTAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSADARA*ISRPSS
Trigger: AGAACTCGGACGTGAGATCCATGCTCTGGCATCGGC...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp ACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGCAGAGGAAGACGGAATaGATGCCATGCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLQLRMHKPGMAEEQEAGQRKTE*MPCRRQ
Trigger: CTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTG...CCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GACCTAAGACCTAGTCCTCGTTGTTGGGAAAAGCCATGGATCCAGGTGGAAGGCGAGGCTCCAGGAGGCTaGGCAGGTAGTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: DLRPSPRCWEKPWIQVEGEAPGG*AGSCWS
Trigger: AGACCAGCAACTACCTGCTCAGCCTCCTGGAGCCTC...GCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR GCA 90 bp TCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLGALCLGPGLWISCSCCPSCPG*PPKIWQ
Trigger: CTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGG...ACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACTTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYLSRPF*PSFFPM
Trigger: CATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAA...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGCCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLPGTEV*AIAAVD
Trigger: ATCCACTGCAGCAATGGCGCATACTTCCGTACCTGG...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCACCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAPGTEV*AIAAVD
Trigger: ATCCACTGCAGCAATGGCGCATACTTCCGTACCTGG...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp CATTGCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTGCTCGTCCACGTGGTGCCCACCCAAAATTTaGCAGCCTCGAAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: HCHKAALLPKRPDCSSTWCPPKI*QPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCA...CCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSHSPQR*RQTGAV
Trigger: CACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTG...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTTGGTATTACTCCCATaGCTCAGTTCGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSLVLLP*LSSVRA
Trigger: TGCTCTCACCGAACTGAGTCATGGGAGTAATACCAA...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp ATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATAGAGGCTCCAGGAGGCTaGGCAGGTAGTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: IPQRKTEWMPCRRQVQIIEAPGG*AGSCWS
Trigger: AGACCAGCAACTACCTGCTCAGCCTCCTGGAGCCTC...TATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp CAGTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLPYSSGCTSQVWLKSRRPSCPG*PPKIWQ
Trigger: CTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGG...CCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTTTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPLSRPF*PSFFPM
Trigger: CATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAA...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp ATGACAGCAGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGATTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: MTAASVMQSQVMETLGGGLSRPF*PSFFPM
Trigger: CATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAA...TCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCTGCTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCAAGTGGATTACATCCTaGCCGTCCCAAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSKWITS*PSQKSS
Trigger: GCTGCTCTTTTGGGACGGCCAGGATGTAATCCACTT...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp GGCAAGCCTGCTGCTGTGAAATGCTTCCACCCTCAGGACAGGAAGTCTCCTGCCAAGTGGATTACATCCTaGCCGTCCCAAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GKPAAVKCFHPQDRKSPAKWITS*PSQKSS
Trigger: GCTGCTCTTTTGGGACGGCCAGGATGTAATCCACTT...GGCAGGAGACTTCCTGTCCTGAGGGTGGAAGCATTTCACAGCAGCAGGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCATGCCCACCCAAAATTTaGCAGCCTCGAAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSCPPKI*QPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCA...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTCTGTCCAGCAGGTTCTaGCGAGGAATTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPLSSRF*RGIRTL
Trigger: CAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp ACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGCTGTCCAGCAGGTTCTaGCGAGGAATTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: TLQLRMHKPGMAEEQEAGLSSRF*RGIRTL
Trigger: CAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG...CCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp ATGACAGCAGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGACTGTCCAGCAGGTTCTaGCGAGGAATTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: MTAASVMQSQVMETLGGGLSSRF*RGIRTL
Trigger: CAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG...TCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCTGCTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp AGAGGCTACAGCATGGGTCCCAGCAAGCCTCTTCTGAGAGCTAGCCACATGCAAGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RGYSMGPSKPLLRASHMQADARA*ISRPSS
Trigger: AGAACTCGGACGTGAGATCCATGCTCTGGCATCGGC...TTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGGGACCCATGCTGTAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp GACCTAAGACCTAGTCCTCGTTGTTGGGAAAAGCCATGGATCCAGGTGGAAGGCTCCAGTCAGCCTTGCTaGAGCCCAGGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: DLRPSPRCWEKPWIQVEGSSQPC*SPGTSG
Trigger: GCCAGAAGTTCCTGGGCTCCAGCAAGGCTGACTGGA...GCCTTCCACCTGGATCCATGGCTTTTCCCAACAACGAGGACTAGGTCTTAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCCTGGACTTTTTCTCTTaGCAGTATCTCCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSLDFFS*QYLRWL
Trigger: GAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAG...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GTGCAGTCACCCTGCCAGGCAGGACCTCGCCACCACGGACTGAGCTGCAGCACTGTCATTCTCCAAAGTTaGGAAGATGGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VQSPCQAGPRHHGLSCSTVILQS*EDGFLE
Trigger: TTCAAGAAAACCATCTTCTCAACTTTGGAGAATGAC...AGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR TCA 90 bp AGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGAGGGAGGACGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SQCDAEPSDGDPWGRREDAVPLL*RSHTQR
Trigger: TCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGC...GTCCTCCCTCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp GAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTAACCGCCACTCAAAGACCCTCTTaGAGCGAAGGAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ELCVWVQASGSAVPAVTATQRPS*SEGSSV
Trigger: AACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGT...GGCGGTTACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCCCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSEEDGMDAMQEAGPDHTPGTEV*AIAAVD
Trigger: ATCCACTGCAGCAATGGCGCATACTTCCGTACCTGG...GGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYLAVVS*FKVTAS
Trigger: AGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAG...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp AGGGTCATGCCGTGTGTGAATTTGCTGAAGGATGAAAGCCACTGCCAAGCAGTCCCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: RVMPCVNLLKDESHCQAVPSPPS*EAGSSC
Trigger: ACACGAAGACCCTGCTTCCCATGACGGGGGTGATGG...GACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCATGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACTGGCCGAGAACCGGATaGCTATGGACACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHWPRTG*LWTRPA
Trigger: AGCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCA...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp TGCCTCACCCTTGGGACTGAGGAGGGGAGTATACACACACAGGAGCAGGGACCACTGGACTTTTTCTCTTaGCAGTATCTCCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: CLTLGTEEGSIHTQEQGPLDFFS*QYLRWL
Trigger: GAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAG...TGGTCCCTGCTCCTGTGTGTGTATACTCCCCTCCTCAGTCCCAAGGGTGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGCTGGACTTTTTCTCTTaGCAGTATCTCCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLLDFFS*QYLRWL
Trigger: GAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAG...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGCTGGACTTTTTCTCTTaGCAGTATCTCCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: TLQLRMHKPGMAEEQEAGLDFFS*QYLRWL
Trigger: GAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAG...CCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp GGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACAACACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GFVCSHRSAGLWAYAMQQHSPQR*RQTGAV
Trigger: CACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTG...TTGTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp ATATGCTTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGAGCAGGGCCATGTGCTaGCTCAGGCACCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: ICLCASHSEIGVQASRFTSRAMC*LRHHRP
Trigger: CGGCCTGTGGTGCCTGAGCCAGCACATGGCCCTGCT...CGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAAGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
3UTR CAA 72 bp AAGCCATCAAGTCCACTCTGTGCCACCCATATGCTCTaGCGTGTGTGGGCACGCAATGGAGCATGCTCAACA +
Preference number: 4 (lower is better)
Translates to: KPSSPLCATHML*RVWARNGACST
Trigger: TGTTGAGCATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGACTTGATGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CAA 72 bp CAGGAAGTCTCCTGCCTTCCTGGGGAAGTGCATCATTaGCCAGCCTTGGGTTTGTGTGCTCTCACAGATCTG +
Preference number: 4 (lower is better)
Translates to: QEVSCLPGEVHH*PALGLCALTDL
Trigger: CAGATCTGTGAGAGCACACAAACCCAAGGCTGGCAAATGATGCACTTCCCCAGGAAGGCAGGAGACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR TCA 90 bp CTAAAGACAGGTGCCATCATAGGGCAGCAAGAACAAATGAGGCTGGCTTATGAGGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LKTGAIIGQQEQMRLAYEANTTA*VAVLPR
Trigger: CCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGC...CTCATAAGCCAGCCTCATTTGTTCTTGCTGCCCTATGATGGCACCTGTCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp GCCATAAAGCTGCCCTCCTGCCTAAGAGACCTGACTGCTCGTCCACGTGGTGTGACTCAAAGACCCTCTTaGAGCGAAGGAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: AIKLPSCLRDLTARPRGVTQRPS*SEGSSV
Trigger: AACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGT...CACACCACGTGGACGAGCAGTCAGGTCTCTTAGGCAGGAGGGCAGCTTTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp ACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAACTCAAAGACCCTCTTaGAGCGAAGGAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TLTSHGLSSLSPVPSYPTTQRPS*SEGSSV
Trigger: AACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGT...TGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp AGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGAGGGAGGACTCAAGGTACTTGAAATaGTTCTCAGAACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: SQCDAEPSDGDPWGRREDSRYLK*FSEPET
Trigger: CGTTTCTGGTTCTGAGAAGCATTTCAAGTACCTTGA...GTCCTCCCTCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCAGTATGCGCCATTGCTaGAGTGGATATTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSSMRHC*SGYSRT
Trigger: TGTCCTTGAATATCCACTGCAGCAATGGCGCATACT...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCAAAGTGGATTACATCCTaGCCGTCCCAAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSKWITS*PSQKSS
Trigger: GCTGCTCTTTTGGGACGGCCAGGATGTAATCCACTT...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: REVWPPHSRVKESDSSREADARA*ISRPSS
Trigger: AGAACTCGGACGTGAGATCCATGCTCTGGCATCGGC...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp GAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTAACCGCCATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ELCVWVQASGSAVPAVTAISFGN*GVQNKV
Trigger: GACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGAT...GGCGGTTACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCATTGGTATTACTCCCATaGCTCAGTTCGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSLVLLP*LSSVRA
Trigger: TGCTCTCACCGAACTGAGTCATGGGAGTAATACCAA...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp ATATGCTTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGGAGGCTCCAGGAGGCTaGGCAGGTAGTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ICLCASHSEIGVQASRFTEAPGG*AGSCWS
Trigger: AGACCAGCAACTACCTGCTCAGCCTCCTGGAGCCTC...CGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAAGCATAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACTCTAGCACACCATTCTaGTGCAGGACAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHSSTPF*CRTAAH
Trigger: GTGGGCAGCTGTCCTGCAGCAGAATGGTGTGCTAGA...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPISFGN*GVQNKV
Trigger: GACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGAT...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp GGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACAACCAACTTCTCCTGGGTaGACAGAACCTCACCATCAG +
Preference number: 4 (lower is better)
Translates to: GFVCSHRSAGLWAYAMQQPTSPG*TEPHHQ
Trigger: CTGATGGTGAGGTTCTGTCCACCCAGGAGAAGTTGG...TTGTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR TCA 90 bp AGTTCACTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLQQKAFIVSPDFTFLSANTTA*VAVLPR
Trigger: CCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGC...AGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAGTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCTCTCCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCASHSEIGVQASRFTSLPSCPG*PPKIWQ
Trigger: CTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGG...GAGAGACGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGCTGCTGCAGGACAGCTaGCCACAGGTTTTTATAGAG +
Preference number: 4 (lower is better)
Translates to: REVWPPHSRVKESDSSRELLQDS*PQVFIE
Trigger: CTCTATAAAAACCTGTGGGCAGCTGTCCTGCAGCAG...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp TGGGATATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACATGGTTTTCTTGAAGTaGATTACATCCTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: WDIPIAATPTSIPFPHLHMVFLK*ITSWPS
Trigger: GGACGGCCAGGATGTAATCCACTTCAAGAAAACCAT...GTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp CAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGGGAGGACGCATTTGTTaGCCAGGGACCAGTCGTACA +
Preference number: 4 (lower is better)
Translates to: QTAAERRVCLKNLPRIPKGGRIC*PGTSRT
Trigger: TGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCC...CTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACCAGAAACGAAAACTGTaGTTCCAAAAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYQKRKL*FQKPTC
Trigger: ACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTG...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTGCAAATCCCCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: TKSFVKFQGPQGDTLCKSPSPPS*EAGSSC
Trigger: ACACGAAGACCCTGCTTCCCATGACGGGGGTGATGG...GGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ATATGCTTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCCAGTCAGCCTTGCTaGAGCCCAGGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ICLCASHSEIGVQASRFTSSQPC*SPGTSG
Trigger: GCCAGAAGTTCCTGGGCTCCAGCAAGGCTGACTGGA...CGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAAGCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp GCACGCAATGGAGCATGCTCAACATACCAGTGGCTCTTAAAGAAAACTGACTCTCACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARNGACSTYQWLLKKTDSHSPQR*RQTGAV
Trigger: CACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTG...AGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
3UTR CAA 72 bp TATGGCCAGTGTAGCAGGGTCATGCCGTGTGTGAATTaGCTGAAGGATGAAAGCCACTGCCAAGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: YGQCSRVMPCVN*LKDESHCQAVT
Trigger: AGTGACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCATGACCCTGCTACACTGGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR TCA 90 bp ATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTGGCCAGATCTGACACCTAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: MDAMQEAGPDHTWPDLTPRRWFS*SGLHPG
Trigger: GCCAGGATGTAATCCACTTCAAGAAAACCATCTTCT...AGGTGTCAGATCTGGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR TCA 90 bp TACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAGGTCATTCTCCAAAGTTaGGAAGATGGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: YSSGCTSQVWLKSRRLGQVILQS*EDGFLE
Trigger: TTCAAGAAAACCATCTTCTCAACTTTGGAGAATGAC...CTGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VTLQLRMHKPGMAEEQEAAVPLL*RSHTQR
Trigger: TCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGC...AGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VKESDSSREKSVSQKSSTANTTA*VAVLPR
Trigger: CCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGC...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGAGGCTCCAGGAGGCTaGGCAGGTAGTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VKESDSSREKSVSQKSSTEAPGG*AGSCWS
Trigger: AGACCAGCAACTACCTGCTCAGCCTCCTGGAGCCTC...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp AGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTGGCCTCAAGGTACTTGAAATaGTTCTCAGAACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: RGRRNGCHAGGRSRSYLASRYLK*FSEPET
Trigger: CGTTTCTGGTTCTGAGAAGCATTTCAAGTACCTTGA...GGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp GCCATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGAGTATGCGCCATTGCTaGAGTGGATATTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: AIKASLMGAIPYWDIPIASMRHC*SGYSRT
Trigger: TGTCCTTGAATATCCACTGCAGCAATGGCGCATACT...CGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp ACACACAGGAGCAGGGACCAGGATACACCATTCATTTCTAGAAGTCATGTGATAAGGCTTGCCAGCCGATaGCAGAGCATGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: THRSRDQDTPFISRSHVIRLASR*QSMDLT
Trigger: CGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT...TATCACATGACTTCTAGAAATGAATGGTGTATCCTGGTCCCTGCTCCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR GCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGLAVVS*FKVTAS
Trigger: AGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAG...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp AGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTAGCACACCATTCTGCTaGAGGACAGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SVSQKSSTDPKVHFSRRLSTPFC*RTAAHR
Trigger: CCTGTGGGCAGCTGTCCTGCAGCAGAATGGTGTGCT...AAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp ATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACAAGAAGGTCCTGTCTaGAAATGCCTGAGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: IPQRKTEWMPCRRQVQIIQEGPV*KCLRSR
Trigger: TCGACTTCTCAGGCATTTGCAGACAGGACCTTCTTG...TATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CCA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTGCAAATCCGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TKSFVKFQGPQGDTLCKSADARA*ISRPSS
Trigger: AGAACTCGGACGTGAGATCCATGCTCTGGCATCGGC...GGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp GGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACAACTGGACTTTTTCTCTTaGCAGTATCTCCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: GFVCSHRSAGLWAYAMQQLDFFS*QYLRWL
Trigger: GAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAG...TTGTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp AAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSVSQKSSTDPKVHFSRRHSPQR*RQTGAV
Trigger: CACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTG...CCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGAGCAGGGCCATGTGCTaGCTCAGGCACCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRSRAMC*LRHHRP
Trigger: CGGCCTGTGGTGCCTGAGCCAGCACATGGCCCTGCT...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGRRWFS*SGLHPG
Trigger: GCCAGGATGTAATCCACTTCAAGAAAACCATCTTCT...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp TCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTGTCATTCTCCAAAGTTaGGAAGATGGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SLGALCLGPGLWISCSCCVILQS*EDGFLE
Trigger: TTCAAGAAAACCATCTTCTCAACTTTGGAGAATGAC...ACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGAVPLL*RSHTQR
Trigger: TCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGC...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCTCTTCTCAAGGTACTTaGAATGCTTCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGSSQGT*NASQNQ
Trigger: CTGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGA...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACTTGGTATTACTCCCATaGCTCAGTTCGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHLVLLP*LSSVRA
Trigger: TGCTCTCACCGAACTGAGTCATGGGAGTAATACCAA...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp GTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCACCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSQKSSTDPKVHFSRRLSPSCPG*PPKIWQ
Trigger: CTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGG...TGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATAGGCTTGCCAGCCGATaGCAGAGCATGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHRLASR*QSMDLT
Trigger: CGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGAAGGCTTGCCAGCCGATaGCAGAGCATGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARRLASR*QSMDLT
Trigger: CGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp TCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTTGCTTCAAAGTCACTaGCTCTGGACTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSEEDGMDAMQEAGPDHTLLQSH*LWTFSL
Trigger: AAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAA...GGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR GCA 90 bp CAGTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGTTGCTTCAAAGTCACTaGCTCTGGACTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QLPYSSGCTSQVWLKSRRLLQSH*LWTFSL
Trigger: AAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAA...CCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp AGAGGCTACAGCATGGGTCCCAGCAAGCCTCTTCTGAGAGCTAGCCACATGCAATTGCTTCAAAGTCACTaGCTCTGGACTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGYSMGPSKPLLRASHMQLLQSH*LWTFSL
Trigger: AAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAA...TTGCATGTGGCTAGCTCTCAGAAGAGGCTTGCTGGGACCCATGCTGTAGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp AGGGTCATGCCGTGTGTGAATTTGCTGAAGGATGAAAGCCACTGCCAAGCAGTCCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RVMPCVNLLKDESHCQAVLAVVS*FKVTAS
Trigger: AGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAG...GACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCATGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp GTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATGCCCACCCAAAATTTaGCAGCCTCGAAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSQKSSTDPKVHFSRRLSCPPKI*QPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCA...TGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTGTGAGCCCTCTGTCCAGCAGGTTCTaGCGAGGAATTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: IFHGSQSSLQQKAFIVSPLSSRF*RGIRTL
Trigger: CAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG...AGGGCTCACAATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp AAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTGTGAGTCCAGTCAGCCTTGCTaGAGCCCAGGAACTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KNLPRIPKFTSAEGFHCESSQPC*SPGTSG
Trigger: GCCAGAAGTTCCTGGGCTCCAGCAAGGCTGACTGGA...CTCACAATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp GCCATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: AIKASLMGAIPYWDIPIAISFGN*GVQNKV
Trigger: GACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGAT...CGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR TCA 90 bp TTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLCALTDLLAFGLTQCNRRWFS*SGLHPG
Trigger: GCCAGGATGTAATCCACTTCAAGAAAACCATCTTCT...GTTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR TCA 90 bp ATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATATCTTCTCAAGGTACTTaGAATGCTTCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: IPQRKTEWMPCRRQVQIISSQGT*NASQNQ
Trigger: CTGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGA...TATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR TCA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGTCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRSVGPN*HRVAEN
Trigger: GTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGA...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCTCAAGGTACTTGAAATaGTTCTCAGAACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGSRYLK*FSEPET
Trigger: CGTTTCTGGTTCTGAGAAGCATTTCAAGTACCTTGA...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR GCA 90 bp GAGTATACACACACAGGAGCAGGGACCAGGATACACCATTCATTTCTAGAAGTCTTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: EYTHTGAGTRIHHSFLEVLSRPF*PSFFPM
Trigger: CATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAA...GACTTCTAGAAATGAATGGTGTATCCTGGTCCCTGCTCCTGTGTGTGTATACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR GCA 90 bp AGTTCACTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTCCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SSLQQKAFIVSPDFTFLSPGTEV*AIAAVD
Trigger: ATCCACTGCAGCAATGGCGCATACTTCCGTACCTGG...AGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAGTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACAGAAACGAAAACTGTaGTTCCAAAAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSQKRKL*FQKPTC
Trigger: ACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTG...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CCA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTGCCCACCCAAAATTTaGCAGCCTCGAAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHCPPKI*QPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCA...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGATGCCCACCCAAAATTTaGCAGCCTCGAAATCCGGGG +
Preference number: 4 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARCPPKI*QPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCA...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp GCACGCAATGGAGCATGCTCAACATACCAGTGGCTCTTAAAGAAAACTGACTCTCTGTCCAGCAGGTTCTaGCGAGGAATTCGAACTTTG +
Preference number: 4 (lower is better)
Translates to: ARNGACSTYQWLLKKTDSLSSRF*RGIRTL
Trigger: CAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG...AGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CCA 90 bp ACACCACACAGACACACATGTATGCATGCACACACATACACTACTCAGATGCACTTCTCCAACTTCTCCTaGGTGGACAGAACCTCACCA +
Preference number: 4 (lower is better)
Translates to: TPHRHTCMHAHTYTTQMHFSNFS*VDRTSP
Trigger: TGGTGAGGTTCTGTCCACCCAGGAGAAGTTGGAGAA...GTGCATCTGAGTAGTGTATGTGTGTGCATGCATACATGTGTGTCTGTGTGGTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR TCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHRRWFS*SGLHPG
Trigger: GCCAGGATGTAATCCACTTCAAGAAAACCATCTTCT...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp CTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGAGCCCGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQQKAFIVSPDFTFLSEPAVPLL*RSHTQR
Trigger: TCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGC...GGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACTCTTCTCAAGGTACTTaGAATGCTTCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHSSQGT*NASQNQ
Trigger: CTGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGA...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp AGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: SVSQKSSTDPKVHFSRRLLSRPF*PSFFPM
Trigger: CATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAA...AAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCTCTCAGTATGCGCCATTGCTaGAGTGGATATTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: LCASHSEIGVQASRFTSLSMRHC*SGYSRT
Trigger: TGTCCTTGAATATCCACTGCAGCAATGGCGCATACT...GAGAGACGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGTTGCTTCAAAGTCACTaGCTCTGGACTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: REVWPPHSRVKESDSSRELLQSH*LWTFSL
Trigger: AAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAA...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCTCTCCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LCASHSEIGVQASRFTSLLAVVS*FKVTAS
Trigger: AGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAG...GAGAGACGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGAGCACACCATTCTGCTaGAGGACAGCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRSTPFC*RTAAHR
Trigger: CCTGTGGGCAGCTGTCCTGCAGCAGAATGGTGTGCT...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp GTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCAAAGTGGATTACATCCTaGCCGTCCCAAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSQKSSTDPKVHFSRRLSKWITS*PSQKSS
Trigger: GCTGCTCTTTTGGGACGGCCAGGATGTAATCCACTT...TGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp TTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCTCTCTCTTCTCAAGGTACTTaGAATGCTTCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LCASHSEIGVQASRFTSLSSQGT*NASQNQ
Trigger: CTGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGA...GAGAGACGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACTCAAGGTACTTGAAATaGTTCTCAGAACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHSRYLK*FSEPET
Trigger: CGTTTCTGGTTCTGAGAAGCATTTCAAGTACCTTGA...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTGCAAATCCAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: TKSFVKFQGPQGDTLCKSRRWFS*SGLHPG
Trigger: GCCAGGATGTAATCCACTTCAAGAAAACCATCTTCT...GGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp GCACGCAATGGAGCATGCTCAACATACCAGTGGCTCTTAAAGAAAACTGACTCTGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARNGACSTYQWLLKKTDSAVPLL*RSHTQR
Trigger: TCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGC...AGAGTCAGTTTTCTTTAAGAGCCACTGGTATGTTGAGCATGCTCCATTGCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR TCA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTTGGTATTACTCCCATaGCTCAGTTCGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHLVLLP*LSSVRA
Trigger: TGCTCTCACCGAACTGAGTCATGGGAGTAATACCAA...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGATTGGTATTACTCCCATaGCTCAGTTCGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARLVLLP*LSSVRA
Trigger: TGCTCTCACCGAACTGAGTCATGGGAGTAATACCAA...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp AGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTACTCAAAGACCCTCTTaGAGCGAAGGAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SVSQKSSTDPKVHFSRRLTQRPS*SEGSSV
Trigger: AACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGT...AAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp GTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCAAGTATGCGCCATTGCTaGAGTGGATATTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: VSQKSSTDPKVHFSRRLSSMRHC*SGYSRT
Trigger: TGTCCTTGAATATCCACTGCAGCAATGGCGCATACT...TGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp AAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGAGTATGCGCCATTGCTaGAGTGGATATTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: KSVSQKSSTDPKVHFSRRSMRHC*SGYSRT
Trigger: TGTCCTTGAATATCCACTGCAGCAATGGCGCATACT...CCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp AGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SVSQKSSTDPKVHFSRRLLAVVS*FKVTAS
Trigger: AGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAG...AAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp ACACCACACAGACACACATGTATGCATGCACACACATACACTACTCAGATGCACATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: TPHRHTCMHAHTYTTQMHISFGN*GVQNKV
Trigger: GACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGAT...GTGCATCTGAGTAGTGTATGTGTGTGCATGCATACATGTGTGTCTGTGTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGAACTCAAAGACCCTCTTaGAGCGAAGGAAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARTQRPS*SEGSSV
Trigger: AACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGT...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp CTAAAGACAGGTGCCATCATAGGGCAGCAAGAACAAATGAGGCTGGCTTATGAGCAGAAACGAAAACTGTaGTTCCAAAAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: LKTGAIIGQQEQMRLAYEQKRKL*FQKPTC
Trigger: ACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTG...CTCATAAGCCAGCCTCATTTGTTCTTGCTGCCCTATGATGGCACCTGTCTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR GCA 90 bp AGTTCACTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTTCAAGGTACTTGAAATaGTTCTCAGAACCAGAAACG +
Preference number: 4 (lower is better)
Translates to: SSLQQKAFIVSPDFTFLSSRYLK*FSEPET
Trigger: CGTTTCTGGTTCTGAGAAGCATTTCAAGTACCTTGA...AGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAGTGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR GCA 90 bp TTTTACAGATACAACACTTTGAGTTTAACTGCTTCATTAGGCGACGAACAGAAACCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FYRYNTLSLTASLGDEQKPGTEV*AIAAVD
Trigger: ATCCACTGCAGCAATGGCGCATACTTCCGTACCTGG...TTTCTGTTCGTCGCCTAATGAAGCAGTTAAACTCAAAGTGTTGTATCTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CCA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTGCAAATCCCAGAAACGAAAACTGTaGTTCCAAAAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: TKSFVKFQGPQGDTLCKSQKRKL*FQKPTC
Trigger: ACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTG...GGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTC +
Preference number: 4 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHISFGN*GVQNKV
Trigger: GACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGAT...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp GTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCAGTCATTCTCCAAAGTTaGGAAGATGGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSQKSSTDPKVHFSRRLSVILQS*EDGFLE
Trigger: TTCAAGAAAACCATCTTCTCAACTTTGGAGAATGAC...TGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp GCATTTTTCTCAGCGGAAACTTCTGGTGCCACCAGAGGAGTTAATAAAACATTTTCTTCTCAAGGTACTTaGAATGCTTCTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: AFFSAETSGATRGVNKTFSSQGT*NASQNQ
Trigger: CTGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGA...AAATGTTTTATTAACTCCTCTGGTGGCACCAGAAGTTTCCGCTGAGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR GCA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTTGCTTCAAAGTCACTaGCTCTGGACTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHLLQSH*LWTFSL
Trigger: AAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAA...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CCA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGCAGAAACGAAAACTGTaGTTCCAAAAACCAACATGT +
Preference number: 4 (lower is better)
Translates to: VKESDSSREKSVSQKSSTQKRKL*FQKPTC
Trigger: ACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTG...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR TCA 90 bp TTTTACAGATACAACACTTTGAGTTTAACTGCTTCATTAGGCGACGAACAGAAAGTCATTCTCCAAAGTTaGGAAGATGGTTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FYRYNTLSLTASLGDEQKVILQS*EDGFLE
Trigger: TTCAAGAAAACCATCTTCTCAACTTTGGAGAATGAC...TTTCTGTTCGTCGCCTAATGAAGCAGTTAAACTCAAAGTGTTGTATCTGTAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS GCA 90 bp AGGCTTGCCAGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTaGCTGCTGGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTGCAC +
Preference number: 5 (lower is better)
Translates to: RLASRCQSMDLTSEF*LLVAVVSPEPGTLH
Trigger: GTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 90 bp TTGCCAGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTGCCTaGTGGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTGCACCTCT +
Preference number: 5 (lower is better)
Translates to: LPADARAWISRPSSA*WSLWSPLSRALCTS
Trigger: AGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp CCAGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTGCCTGCTaGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTGCACCTCTATC +
Preference number: 5 (lower is better)
Translates to: PADARAWISRPSSAC*SLWSPLSRALCTSI
Trigger: GATAGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 90 bp GGCACTCCTGGATACCCCGCTGGGCTGTCCATGAGGCTAGAGGCTTaGCAGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: GTPGYPAGLSMRLEA*QPMPEHGSHVRVLP
Trigger: AGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCAGCGGGGTATCCAGGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp TGGGCTGTCCATGAGGCTAGAGGCTTGCCAGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCTGCCTGCTGGTCGCTGTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: WAVHEARGLPADARA*ISRPSSACWSLWSP
Trigger: GGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp GCCAGAGCATGGATCTCACGTCCGAGTTCTGCCTGCTGGTCGCTGTaGTCTCCCCTGAGCCGGGCACTCTGCACCTCTATCAAGTCCATG +
Preference number: 5 (lower is better)
Translates to: ARAWISRPSSACWSL*SPLSRALCTSIKSM
Trigger: CATGGACTTGATAGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCAGCTCCCCAGAGTaGAAGGAGGCTCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYSSSPE*KEALAR
Trigger: CCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGCT...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS CCA 90 bp AGGGTCTTCGTGTCACGGATCTGCACCAGGAAGGAATGCAGCCCGTaGCACTGGCCGTCTGGCATGTACAGTTGGGCAAACACCACCGCA +
Preference number: 5 (lower is better)
Translates to: RVFVSRICTRKECSP*HWPSGMYSWANTTA
Trigger: TGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCATTCCTTCCTGGTGCAGATCCGTGACACGAAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp CAGGCCGTAGAGCGTGCTGAGCCGCCCGAGCACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTGTATATGTTCGTGGAATCGCTGCAT +
Preference number: 5 (lower is better)
Translates to: QAVERAEPPEHSPQR*RQTGAVYMFVESLH
Trigger: ATGCAGCGATTCCACGAACATATACACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTGCTCGGGCGGCTCAGCACGCTCTACGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAAGCAGCTCCCCAGAGTaGAAGGAGGCTCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGASSSPE*KEALAR
Trigger: CCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGCT...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp TACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAGGAAGTGAGCTCCGTCTaGGAGAGGAGGCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: YSSGCTSQVWLKSRRLGQEVSSV*ERRLQE
Trigger: CTCCTGGAGCCTCCTCTCCAAGACGGAGCTCACTTC...CTGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS GCA 90 bp GAGGGGGCGATGACATCTACCAAGGCCACCGCATCGTCTTTCAGCTaGTCACACAGGGTCAGGATGGCGTCCTCCATCGCTCTTCCTGTT +
Preference number: 5 (lower is better)
Translates to: EGAMTSTKATASSFS*SHRVRMASSIALPV
Trigger: AACAGGAAGAGCGATGGAGGACGCCATCCTGACCCTGTGTGAGCAGCTGAAAGACGATGCGGTGGCCTTGGTAGATGTCATCGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp ACGGATCTGCACCAGGAAGGAATGCAGCCCGTGGCACTGGCCGTCTaGCATGTACAGTTGGGCAAACACCACCGCATGAGTTGCCGTCTT +
Preference number: 5 (lower is better)
Translates to: TDLHQEGMQPVALAV*HVQLGKHHRMSCRL
Trigger: AAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCATTCCTTCCTGGTGCAGATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGGCCGTCTTGCCCAGGTaGCCCACCCAAAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLAVLPR*PTQNLA
Trigger: TGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGC...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCAGCCGTCTTGCCCAGGTaGCCCACCCAAAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAAVLPR*PTQNLA
Trigger: TGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGC...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp ATGACAGCAGCCAGTGTGATGCAGAGCCAAGTGATGGAGACCCTTGGGGGCGGAGCCGTCTTGCCCAGGTaGCCCACCCAAAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: MTAASVMQSQVMETLGGGAVLPR*PTQNLA
Trigger: TGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGC...TCCGCCCCCAAGGGTCTCCATCACTTGGCTCTGCATCACACTGGCTGCTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp GAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTAACCGCCACGGCCAGCTTCAGGTaGACCACAGACATGCTGATG +
Preference number: 5 (lower is better)
Translates to: ELCVWVQASGSAVPAVTATASFR*TTDMLM
Trigger: CATCAGCATGTCTGTGGTCAACCTGAAGCTGGCCGT...GGCGGTTACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp TCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTGAAGTGAGCTCCGTCTaGGAGAGGAGGCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SLGALCLGPGLWISCSCCEVSSV*ERRLQE
Trigger: CTCCTGGAGCCTCCTCTCCAAGACGGAGCTCACTTC...ACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTTGCACTCCTGAAGCCATGCCTGCTGGGCGGGCCTGGGAAGGGGGCACTGCTTCCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LALLKPCLLGGPGKGALLPYTWL*FLASKS
Trigger: TGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGG...AAGCAGTGCCCCCTTCCCAGGCCCGCCCAGCAGGCATGGCTTCAGGAGTGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS GCA 90 bp CTGGCATGTACAGTTGGGCAAACACCACCGCATGAGTTGCCGTCTTaGCCAGGTTGCCCACCCAAAATTTGGCAGCCTCGAAATCCGGGG +
Preference number: 5 (lower is better)
Translates to: LACTVGQTPPHELPS*PGCPPKIWQPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp TCTGCCCCAGCTTCTTCCCAATGTCACCGACCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGTCACGGATCTGCACCAGGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: SAPASSQCHRPSPPS*EAGSSCHGSAPGRN
Trigger: ATTCCTTCCTGGTGCAGATCCGTGACACGAAGACCCTGCTTCCCATGACGGGGGTGATGGTCGGTGACATTGGGAAGAAGCTGGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAGTCTGGCATGTACAGTaGGGCAAACACCACCGCATG +
Preference number: 5 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSVWHVQ*GKHHRM
Trigger: CATGCGGTGGTGTTTGCCCAACTGTACATGCCAGAC...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCTCAACGGCCAGCTTCAGGTaGACCACAGACATGCTGATG +
Preference number: 5 (lower is better)
Translates to: HLPRSVFSEPCPQLPYSSTASFR*TTDMLM
Trigger: CATCAGCATGTCTGTGGTCAACCTGAAGCTGGCCGT...TGAGCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp GCCTCTACCCATAGGCCCCCACATGCCACCTGCCTCACCCTTGGGACTGAGGAGTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: ASTHRPPHATCLTLGTEESGLFL*AVSPMA
Trigger: AGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGA...CTCCTCAGTCCCAAGGGTGAGGCAGGTGGCATGTGGGGGCCTATGGGTAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS GCA 90 bp GGCCAGGGCCAGGGGCCGGCAGCCGTACACCTGGCTGTTGTTTCTTaGTTCAAAGTCACTGCCTCTGGACTTTTTCTCTTGGCAGTATCT +
Preference number: 5 (lower is better)
Translates to: GQGQGPAAVHLAVVS*FKVTASGLFLLAVS
Trigger: AGATACTGCCAAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGGCTGCCGGCCCCTGGCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CAGTGTGTGCAGTCACCCTGCCAGGCAGGACCTCGCCACCACGGACTGAGCTGCGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGG +
Preference number: 5 (lower is better)
Translates to: QCVQSPCQAGPRHHGLSCEKMVF*KWITSW
Trigger: CCAGGATGTAATCCACTTCAAGAAAACCATCTTCTC...GCAGCTCAGTCCGTGGTGGCGAGGTCCTGCCTGGCAGGGTGACTGCACACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp TCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCGCCGTCTTGCCCAGGTaGCCCACCCAAAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSEEDGMDAMQEAGPDHTAVLPR*PTQNLA
Trigger: TGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGC...GGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp CTCTGGGAGGATGCTGAGCCAGGGCGGTGTGTGTGTATGACCAAGAAGAACAGGGTCTGGCATGTACAGTaGGGCAAACACCACCGCATG +
Preference number: 5 (lower is better)
Translates to: LWEDAEPGRCVCMTKKNRVWHVQ*GKHHRM
Trigger: CATGCGGTGGTGTTTGCCCAACTGTACATGCCAGAC...CCTGTTCTTCTTGGTCATACACACACACCGCCCTGGCTCAGCATCCTCCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CAA 90 bp TCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTACGGCCAGCTTCAGGTaGACCACAGACATGCTGATG +
Preference number: 5 (lower is better)
Translates to: SLGALCLGPGLWISCSCCTASFR*TTDMLM
Trigger: CATCAGCATGTCTGTGGTCAACCTGAAGCTGGCCGT...ACAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS TCA 90 bp GGATATTCAAGGACAGGAATCTCTTCCTTATCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAACCGGATGGCTATGGACACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GYSRTGISSLSVGPN*HRVAENRMAMDTAS
Trigger: GCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGATAAGGAAGAGATTCCTGTCCTTGAATATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 90 bp AGTTCTGCCTGCTGGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTaGACCTCTATCAAGTCCATGAAGATTGTCTTAGAGAAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SSACWSLWSPLSRAL*TSIKSMKIVLEKWS
Trigger: GGACCACTTCTCTAAGACAATCTTCATGGACTTGATAGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAAAGCAGCTCCCCAGAGTaGAAGGAGGCTCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: LGFVCSHRSAGLWAYAMQSSSPE*KEALAR
Trigger: CCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGCT...TTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCAGTCTGGCATGTACAGTaGGGCAAACACCACCGCATG +
Preference number: 5 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSVWHVQ*GKHHRM
Trigger: CATGCGGTGGTGTTTGCCCAACTGTACATGCCAGAC...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp GGACCTCGCCACCACGGACTGAGCTGCAGCACTCAGAAACACAAGTTCCTCTCCCGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAG +
Preference number: 5 (lower is better)
Translates to: GPRHHGLSCSTQKHKFLSRKYAP*LQWIFK
Trigger: CTTGAATATCCACTGCAGCAATGGCGCATACTTCCG...GGAGAGGAACTTGTGTTTCTGAGTGCTGCAGCTCAGTCCGTGGTGGCGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp GCTTATGAGGTGAGAGAGGACATACAGGTGAGCCACTCAGGCAGCATCAAAGGTGAAGTGAGCTCCGTCTaGGAGAGGAGGCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AYEVREDIQVSHSGSIKGEVSSV*ERRLQE
Trigger: CTCCTGGAGCCTCCTCTCCAAGACGGAGCTCACTTC...ACCTTTGATGCTGCCTGAGTGGCTCACCTGTATGTCCTCTCTCACCTCATAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCACCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAPGCCF*LQSHCL
Trigger: GAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGG...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGCCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLPGCCF*LQSHCL
Trigger: GAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGG...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS TCA 90 bp CAGCTTTGGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGGCGATaGCATCTACCAAGGCCACCGCATCGTCTTTCAGCTGCTCACACA +
Preference number: 5 (lower is better)
Translates to: QLWQLGSSEQSRRGR*HLPRPPHRLSAAHT
Trigger: TGTGTGAGCAGCTGAAAGACGATGCGGTGGCCTTGGTAGATGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 90 bp ACAGTTGGGCAAACACCACCGCATGAGTTGCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAGCCTCGAAATCCGGGGAATGTAAGA +
Preference number: 5 (lower is better)
Translates to: TVGQTPPHELPSCPG*PPKIWQPRNPGNVR
Trigger: TCTTACATTCCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 90 bp GGCAACAGGCCCTGCATGTGGTGGTCCTACCAAGAAGGTCCTGTCTaGAAATGCCTGAGAAGTCGACCTCACCATCAGCTTTGGCAATTG +
Preference number: 5 (lower is better)
Translates to: GNRPCMWWSYQEGPV*KCLRSRPHHQLWQL
Trigger: CAATTGCCAAAGCTGATGGTGAGGTCGACTTCTCAGGCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CCA 90 bp AGCATGTGCTCAGTTCCTTCTGCAGGCAACAGGCCCTGCATGTGGTaGTCCTACCAAGAAGGTCCTGTCTGCAAATGCCTGAGAAGTCGA +
Preference number: 5 (lower is better)
Translates to: SMCSVPSAGNRPCMW*SYQEGPVCKCLRSR
Trigger: TCGACTTCTCAGGCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCCTGCAGAAGGAACTGAGCACATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CCA 90 bp GAGAGCATGTGCTCAGTTCCTTCTGCAGGCAACAGGCCCTGCATGTaGTGGTCCTACCAAGAAGGTCCTGTCTGCAAATGCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: ESMCSVPSAGNRPCM*WSYQEGPVCKCLRS
Trigger: ACTTCTCAGGCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCCTGCAGAAGGAACTGAGCACATGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CCA 90 bp GAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTaGCCAGATCTGACACCTCACCATCAGCTTTGGCAATTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: EDGMDAMQEAGPDHT*PDLTPHHQLWQLGS
Trigger: ACTCCCCAATTGCCAAAGCTGATGGTGAGGTGTCAGATCTGGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLYSKTL*QRRKFS
Trigger: ACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTA...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGTACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: TLQLRMHKPGMAEEQEAGYSKTL*QRRKFS
Trigger: ACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTA...CCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CATAAAAGCAAGCCTGATGGGAGCCATCCCCTACTGGGATATTCCCATAGCGGCACGGCCAGCTTCAGGTaGACCACAGACATGCTGATG +
Preference number: 5 (lower is better)
Translates to: HKSKPDGSHPLLGYSHSGTASFR*TTDMLM
Trigger: CATCAGCATGTCTGTGGTCAACCTGAAGCTGGCCGT...GCCGCTATGGGAATATCCCAGTAGGGGATGGCTCCCATCAGGCTTGCTTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CTGTTCTTAGTCTCAATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGGAAGTGAGCTCCGTCTaGGAGAGGAGGCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LFLVSIPQRKTEWMPCRREVSSV*ERRLQE
Trigger: CTCCTGGAGCCTCCTCTCCAAGACGGAGCTCACTTC...CCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAATTGAGACTAAGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp CTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGAGCCCGAAGTGAGCTCCGTCTaGGAGAGGAGGCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LQQKAFIVSPDFTFLSEPEVSSV*ERRLQE
Trigger: CTCCTGGAGCCTCCTCTCCAAGACGGAGCTCACTTC...GGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp TCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACCTTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: SHSGYAYIYTLPPPPPSPSGLFL*AVSPMA
Trigger: AGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGA...AGGTGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp GTCTCTTGGAGCTCTGTGTCTGGGTCCAGGCCTCTGGATCAGCTGTTCCTGCTGTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: VSWSSVSGSRPLDQLFLLSGLFL*AVSPMA
Trigger: AGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGA...CAGCAGGAACAGCTGATCCAGAGGCCTGGACCCAGACACAGAGCTCCAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGGGCACCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LQLRMHKPGMAEEQEAGAPYTWL*FLASKS
Trigger: TGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGG...TGCCCCAGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CTCTGGGAGGATGCTGAGCCAGGGCGGTGTGTGTGTATGACCAAGAAGAACAGGCATCGCTCTTCCTGTTaGTTCCCCAGAAATGTAGCC +
Preference number: 5 (lower is better)
Translates to: LWEDAEPGRCVCMTKKNRHRSSC*FPRNVA
Trigger: GGCTACATTTCTGGGGAACAAACAGGAAGAGCGATG...CCTGTTCTTCTTGGTCATACACACACACCGCCCTGGCTCAGCATCCTCCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CAA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCCATCAGCTTTGGCAATaGGGGAGTTCAGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSHQLWQ*GSSEQS
Trigger: ACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATG...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGGTCTGGCATGTACAGTaGGGCAAACACCACCGCATG +
Preference number: 5 (lower is better)
Translates to: REVWPPHSRVKESDSSREVWHVQ*GKHHRM
Trigger: CATGCGGTGGTGTTTGCCCAACTGTACATGCCAGAC...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAAGTCTGGCATGTACAGTaGGGCAAACACCACCGCATG +
Preference number: 5 (lower is better)
Translates to: LGFVCSHRSAGLWAYAMQVWHVQ*GKHHRM
Trigger: CATGCGGTGGTGTTTGCCCAACTGTACATGCCAGAC...TTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAG +
Preference number: 5 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSRKYAP*LQWIFK
Trigger: CTTGAATATCCACTGCAGCAATGGCGCATACTTCCG...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp TGGGATATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: WDIPIAATPTSIPFPHLHPGCCF*LQSHCL
Trigger: GAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGG...GTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp TATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACCCTCACATCGCTCTTCCTGTTaGTTCCCCAGAAATGTAGCC +
Preference number: 5 (lower is better)
Translates to: YSHSGYAYIYTLPPPPPSHRSSC*FPRNVA
Trigger: GGCTACATTTCTGGGGAACAAACAGGAAGAGCGATG...TGAGGGTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS TCA 90 bp TCCCAGTCCTGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTTGTTaGACATGGCGAATCCATTATCCAGGCCATTCTGCCCCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SQSCPAGSGEEFELC*TWRIHYPGHSAPAS
Trigger: AGAAGCTGGGGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAGGACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS TCA 90 bp CATTGTTGTCACCTTCATAGGTACAGTTTGGGTCGTTGTCGTTTCTaGGGTCACCAAACCGGTTCATGGCCAGGTAGCCATGTCCCCCAC +
Preference number: 5 (lower is better)
Translates to: HCCHLHRYSLGRCRF*GHQTGSWPGSHVPH
Trigger: GTGGGGGACATGGCTACCTGGCCATGAACCGGTTTGGTGACCTCAGAAACGACAACGACCCAAACTGTACCTATGAAGGTGACAACAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS TCA 90 bp TGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTGGCCAGATCTaGCACCTCACCATCAGCTTTGGCAATTGGGGAGTTCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: WMPCRRQVQIIPGQI*HLTISFGNWGVQNK
Trigger: TTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTGTCAGATCTGGCCAGGTATGATCTGGACCTGCCTCCTGCATGGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114238.5
CDS CCA 90 bp ATTGCTGCAGTGGATATTCAAGGACAGGAATCTCTTCCTTATCCGTaGGTCCAAACTGACACCGTGTGGCCGAGAACCGGATGGCTATGG +
Preference number: 5 (lower is better)
Translates to: IAAVDIQGQESLPYP*VQTDTVWPRTGWLW
Trigger: CCATAGCCATCCGGTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGATAAGGAAGAGATTCCTGTCCTTGAATATCCACTGCAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp GGTCTGCTGCAGCAGGACATTGTTGTCACCTTCATAGGTACAGTTTaGGTCGTTGTCGTTTCTGAGGTCACCAAACCGGTTCATGGCCAG +
Preference number: 5 (lower is better)
Translates to: GLLQQDIVVTFIGTV*VVVVSEVTKPVHGQ
Trigger: CTGGCCATGAACCGGTTTGGTGACCTCAGAAACGACAACGACCCAAACTGTACCTATGAAGGTGACAACAATGTCCTGCTGCAGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp CAACTTCTCCTGGGTGGACAGAACCTCACCATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTCGGAGGGGGCGATGACATCTACCAA +
Preference number: 5 (lower is better)
Translates to: QLLLGGQNLTISFGN*GVQNKVGGGDDIYQ
Trigger: TTGGTAGATGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTTCTGTCCACCCAGGAGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp AGGGCTCGAGGCACAAGCATGGAGACCCTAGTTCAGATCCCCAGAGCCCACATCGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGG +
Preference number: 5 (lower is better)
Translates to: RARGTSMETLVQIPRAHIEKMVF*KWITSW
Trigger: CCAGGATGTAATCCACTTCAAGAAAACCATCTTCTC...GATGTGGGCTCTGGGGATCTGAACTAGGGTCTCCATGCTTGTGCCTCGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp TCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACCTACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: SSEEDGMDAMQEAGPDHTYSKTL*QRRKFS
Trigger: ACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTA...GGTATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp CACCCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACATCTTCTCAAGGTACTaGAAATGCTTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: HPHLPRSVFSEPCPQLPYIFSRY*KCFSEP
Trigger: TGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGAT...GTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CCTCACCTCCCACGGTCTGTCTTCTCTGAGCCCTGTCCCCAGTTACCCTACAGCATCTTCTCAAGGTACTaGAAATGCTTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: PHLPRSVFSEPCPQLPYSIFSRY*KCFSEP
Trigger: TGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGAT...GCTGTAGGGTAACTGGGGACAGGGCTCAGAGAAGACAGACCGTGGGAGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGGCCGTCTTGCCCAGGTaGCCCACCCAAAATTTGGCA +
Preference number: 5 (lower is better)
Translates to: QTAAERRVCLKNLPRIPKAVLPR*PTQNLA
Trigger: TGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGC...CTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CAGTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: QLPYSSGCTSQVWLKSRRSGLFL*AVSPMA
Trigger: AGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGA...CCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp TCCACTCTGTGCCACCCATATGCTCTTGCGTGTGTGGGCACGCAATGGAGCATGCATCAGCTTTGGCAATaGGGGAGTTCAGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: STLCHPYALACVGTQWSMHQLWQ*GSSEQS
Trigger: ACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATG...CATGCTCCATTGCGTGCCCACACACGCAAGAGCATATGGGTGGCACAGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS GCA 90 bp ATTCGAACTTTGTTGAACATGGCGAATCCATTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATGTCACCGACCATCACCCCCGTCATG +
Preference number: 5 (lower is better)
Translates to: IRTLLNMANPLSRPF*PSFFPMSPTITPVM
Trigger: CATGACGGGGGTGATGGTCGGTGACATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp AAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGAGCAGCTCCCCAGAGTaGAAGGAGGCTCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: KSVSQKSSTDPKVHFSRRSSSPE*KEALAR
Trigger: CCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGCT...CCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp AGAGAAGTATGGCCACCCCACAGCAGGGTTAAAGAATCAGACAGCAGCAGAGAGCGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAG +
Preference number: 5 (lower is better)
Translates to: REVWPPHSRVKESDSSRERKYAP*LQWIFK
Trigger: CTTGAATATCCACTGCAGCAATGGCGCATACTTCCG...CTCTCTGCTGCTGTCTGATTCTTTAACCCTGCTGTGGGGTGGCCATACTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp AGGGTCATGCCGTGTGTGAATTTGCTGAAGGATGAAAGCCACTGCCAAGCAGTCCCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: RVMPCVNLLKDESHCQAVPGCCF*LQSHCL
Trigger: GAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGG...GACTGCTTGGCAGTGGCTTTCATCCTTCAGCAAATTCACACACGGCATGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CAA 90 bp TATGAGGTGAGAGAGGACATACAGGTGAGCCACTCAGGCAGCATCAAAGGTAGGCCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTC +
Preference number: 5 (lower is better)
Translates to: YEVREDIQVSHSGSIKGRPGCCF*LQSHCL
Trigger: GAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGG...CCTACCTTTGATGCTGCCTGAGTGGCTCACCTGTATGTCCTCTCTCACCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS CCA 90 bp TTCTCAGAACCAGAAACGAAAACTGTGGTTCCAAAAACCAACATGTaGAGGACGCATTTGTTGGCCAGGGACCAGTCGTACATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FSEPETKTVVPKTNM*RTHLLARDQSYMPR
Trigger: CCTGGGCATGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTGGTTCTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 90 bp AGCTGCCCACAGGTTTTTATAGAGCTCACCATCAGCTTTGGCAATTaGGGAGTTCAGAACAAAGTCGGAGGGGGCGATGACATCTACCAA +
Preference number: 5 (lower is better)
Translates to: SCPQVFIELTISFGN*GVQNKVGGGDDIYQ
Trigger: TTGGTAGATGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGCTCTATAAAAACCTGTGGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CAGTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGG +
Preference number: 5 (lower is better)
Translates to: QLPYSSGCTSQVWLKSRREKMVF*KWITSW
Trigger: CCAGGATGTAATCCACTTCAAGAAAACCATCTTCTC...CCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp ACACCACACAGACACACATGTATGCATGCACACACATACACTACTCAGATGCACACGGCCAGCTTCAGGTaGACCACAGACATGCTGATG +
Preference number: 5 (lower is better)
Translates to: TPHRHTCMHAHTYTTQMHTASFR*TTDMLM
Trigger: CATCAGCATGTCTGTGGTCAACCTGAAGCTGGCCGT...GTGCATCTGAGTAGTGTATGTGTGTGCATGCATACATGTGTGTCTGTGTGGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LGFVCSHRSAGLWAYAMQPYTWL*FLASKS
Trigger: TGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGG...TTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTGTTCTTAGTCTCAATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCATCGCTCTTCCTGTTaGTTCCCCAGAAATGTAGCC +
Preference number: 5 (lower is better)
Translates to: LFLVSIPQRKTEWMPCRRHRSSC*FPRNVA
Trigger: GGCTACATTTCTGGGGAACAAACAGGAAGAGCGATG...CCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAATTGAGACTAAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp GTTACCCTACAGCTCAGGATGCACAAGCCAGGTATGGCTGAAGAGCAGGAGGCTGGAATTCGAACTTTGTaGAACATGGCGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: VTLQLRMHKPGMAEEQEAGIRTL*NMANPL
Trigger: TAATGGATTCGCCATGTTCAACAAAGTTCGAATTCC...AGCCTCCTGCTCTTCAGCCATACCTGGCTTGTGCATCCTGAGCTGTAGGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp TGGGATATTCCCATAGCGGCTACGCCTACATCTATACCCTTCCCCCACCTCCACGGAATTCGAACTTTGTaGAACATGGCGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: WDIPIAATPTSIPFPHLHGIRTL*NMANPL
Trigger: TAATGGATTCGCCATGTTCAACAAAGTTCGAATTCC...GTGGAGGTGGGGGAAGGGTATAGATGTAGGCGTAGCCGCTATGGGAATATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068563.12
ENSMUST00000114238.5
CDS-3UTR CAA 90 bp CAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGCGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAG +
Preference number: 5 (lower is better)
Translates to: QTAAERRVCLKNLPRIPKRKYAP*LQWIFK
Trigger: CTTGAATATCCACTGCAGCAATGGCGCATACTTCCG...CTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGAGCCCCCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LQQKAFIVSPDFTFLSEPPYTWL*FLASKS
Trigger: TGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGG...GGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ATTCCTCAGAGGAAGACGGAATGGATGCCATGCAGGAGGCAGGTCCAGATCATACATCAGCTTTGGCAATaGGGGAGTTCAGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: IPQRKTEWMPCRRQVQIIHQLWQ*GSSEQS
Trigger: ACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATG...TATGATCTGGACCTGCCTCCTGCATGGCATCCATTCCGTCTTCCTCTGAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS-3UTR CAA 90 bp CTTGGGTTTGTGTGCTCTCACAGATCTGCTGGCCTTTGGGCTTACGCAATGCAACATCAGCTTTGGCAATaGGGGAGTTCAGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: LGFVCSHRSAGLWAYAMQHQLWQ*GSSEQS
Trigger: ACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATG...TTGCATTGCGTAAGCCCAAAGGCCAGCAGATCTGTGAGAGCACACAAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGAGCAGCTCCCCAGAGTaGAAGGAGGCTCTTGCTCGG +
Preference number: 5 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRSSSPE*KEALAR
Trigger: CCGAGCAAGAGCCTCCTTCAACTCTGGGGAGCTGCT...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ACACCACACAGACACACATGTATGCATGCACACACATACACTACTCAGATGCACCGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAG +
Preference number: 5 (lower is better)
Translates to: TPHRHTCMHAHTYTTQMHRKYAP*LQWIFK
Trigger: CTTGAATATCCACTGCAGCAATGGCGCATACTTCCG...GTGCATCTGAGTAGTGTATGTGTGTGCATGCATACATGTGTGTCTGTGTGGTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp ATATGCTTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGCATCGCTCTTCCTGTTaGTTCCCCAGAAATGTAGCC +
Preference number: 5 (lower is better)
Translates to: ICLCASHSEIGVQASRFTHRSSC*FPRNVA
Trigger: GGCTACATTTCTGGGGAACAAACAGGAAGAGCGATG...CGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAAGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS TCA 90 bp CTGTCGTTCGCATGGCCTTGGTATTACTCCCATGACTCAGTTCGGTaGGAGCAAAACAGCCAAAAATCTCCAGGCTATAGATCTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LSFAWPWYYSHDSVR*EQNSQKSPGYRSSQ
Trigger: TTGAGAAGATCTATAGCCTGGAGATTTTTGGCTGTTTTGCTCTCACCGAACTGAGTCATGGGAGTAATACCAAGGCCATGCGAACGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CTTCAGCAGAAGGCTTTCATTGTGAGCCCTGACTTTACCTTCCTATCTGAGCCCGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGG +
Preference number: 5 (lower is better)
Translates to: LQQKAFIVSPDFTFLSEPEKMVF*KWITSW
Trigger: CCAGGATGTAATCCACTTCAAGAAAACCATCTTCTC...GGGCTCAGATAGGAAGGTAAAGTCAGGGCTCACAATGAAAGCCTTCTGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ATATGCTTATGTGCCAGCCACAGTGAGATTGGAGTGCAAGCTTCTAGATTCACGTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: ICLCASHSEIGVQASRFTSGLFL*AVSPMA
Trigger: AGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGA...CGTGAATCTAGAAGCTTGCACTCCAATCTCACTGTGGCTGGCACATAAGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp AAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCATCGCTCTTCCTGTTaGTTCCCCAGAAATGTAGCC +
Preference number: 5 (lower is better)
Translates to: KSVSQKSSTDPKVHFSRRHRSSC*FPRNVA
Trigger: GGCTACATTTCTGGGGAACAAACAGGAAGAGCGATG...CCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS TCA 90 bp TCAGCACTAGAATCTTCAGGGGGTTCTTTAGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGACCCTCTTGCAGCGAAGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: SALESSGGSLAVPLL*RSHTQRPSCSEGSS
Trigger: TGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGCTAAAGAACCCCCTGAAGATTCTAGTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp CAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGG +
Preference number: 5 (lower is better)
Translates to: QTAAERRVCLKNLPRIPKEKMVF*KWITSW
Trigger: CCAGGATGTAATCCACTTCAAGAAAACCATCTTCTC...CTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp GGTTCATGGTACAGAGGAGTAAATGGCAGGTATAGAGAAGTATGGCCACCCCACATCTTCTCAAGGTACTaGAAATGCTTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: GSWYRGVNGRYREVWPPHIFSRY*KCFSEP
Trigger: TGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGAT...GTGGGGTGGCCATACTTCTCTATACCTGCCATTTACTCCTCTGTACCATGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp CTTCTGTGGGAGCATTTTTCTCAGCGGAAACTTCTGGTGCCACCAGAGGAGTTAGGAATTCGAACTTTGTaGAACATGGCGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: LLWEHFSQRKLLVPPEELGIRTL*NMANPL
Trigger: TAATGGATTCGCCATGTTCAACAAAGTTCGAATTCC...TAACTCCTCTGGTGGCACCAGAAGTTTCCGCTGAGAAAAATGCTCCCACAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000068947.14
CDS-3UTR CAA 90 bp AAGAGTGTGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KSVSQKSSTDPKVHFSRRPYTWL*FLASKS
Trigger: TGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGG...CCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACACACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ACTAAGTCCTTTGTTAAATTCCAAGGCCCTCAGGGAGACACACTGTGCAAATCCCATCAGCTTTGGCAATaGGGGAGTTCAGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: TKSFVKFQGPQGDTLCKSHQLWQ*GSSEQS
Trigger: ACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATG...GGATTTGCACAGTGTGTCTCCCTGAGGGCCTTGGAATTTAACAAAGGACTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp TGTCTCAAAAATCTTCCACGGATCCCAAAGTTCACTTCAGCAGAAGGCTTTCATTACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: CLKNLPRIPKFTSAEGFHYSKTL*QRRKFS
Trigger: ACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTA...ATGAAAGCCTTCTGCTGAAGTGAACTTTGGGATCCGTGGAAGATTTTTGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ACACAATTTTTAAAAGCAGCAGCTAAAGACAGGTGCCATCATAGGGCAGCAAGATACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGT +
Preference number: 5 (lower is better)
Translates to: TQFLKAAAKDRCHHRAARYSKTL*QRRKFS
Trigger: ACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTA...TCTTGCTGCCCTATGATGGCACCTGTCTTTAGCTGCTGCTTTTAAAAATTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp ACACCACACAGACACACATGTATGCATGCACACACATACACTACTCAGATGCACATCTTCTCAAGGTACTaGAAATGCTTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: TPHRHTCMHAHTYTTQMHIFSRY*KCFSEP
Trigger: TGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGAT...GTGCATCTGAGTAGTGTATGTGTGTGCATGCATACATGTGTGTCTGTGTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS-3UTR CAA 90 bp GTTAAAGAATCAGACAGCAGCAGAGAGAAGAGTGTGTCTCAAAAATCTTCCACGGGAATTCGAACTTTGTaGAACATGGCGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: VKESDSSREKSVSQKSSTGIRTL*NMANPL
Trigger: TAATGGATTCGCCATGTTCAACAAAGTTCGAATTCC...CGTGGAAGATTTTTGAGACACACTCTTCTCTCTGCTGCTGTCTGATTCTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp ATCTTCAAATTACATCATTCTGATGGTTCATGGTACAGAGGAGTAAATGGCAGGATCTTCTCAAGGTACTaGAAATGCTTCTCAGAACCA +
Preference number: 5 (lower is better)
Translates to: IFKLHHSDGSWYRGVNGRIFSRY*KCFSEP
Trigger: TGGTTCTGAGAAGCATTTCAAGTACCTTGAGAAGAT...CCTGCCATTTACTCCTCTGTACCATGAACCATCAGAATGATGTAATTTGAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS-3UTR CAA 90 bp TTTTACAGATACAACACTTTGAGTTTAACTGCTTCATTAGGCGACGAACAGAAAGGAATTCGAACTTTGTaGAACATGGCGAATCCATTA +
Preference number: 5 (lower is better)
Translates to: FYRYNTLSLTASLGDEQKGIRTL*NMANPL
Trigger: TAATGGATTCGCCATGTTCAACAAAGTTCGAATTCC...TTTCTGTTCGTCGCCTAATGAAGCAGTTAAACTCAAAGTGTTGTATCTGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS CCA 72 bp CCCCCACACGCCTCACGGCACTCCTGGATACCCCGCTaGGCTGTCCATGAGGCTAGAGGCTTGCCAGCCGAT +
Preference number: 6 (lower is better)
Translates to: PPHASRHSWIPR*AVHEARGLPAD
Trigger: ATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCAGCGGGGTATCCAGGAGTGCCGTGAGGCGTGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp AGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTaGCTGCTGGTCGCTGTGGTCTCCCCTGAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SRCQSMDLTSEF*LLVAVVSPEPG
Trigger: GCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp GCCAGAGCATGGATCTCACGTCCGAGTTCTGCCTGCTaGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTGC +
Preference number: 6 (lower is better)
Translates to: ARAWISRPSSAC*SLWSPLSRALC
Trigger: GCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp GATGCCAGAGCATGGATCTCACGTCCGAGTTCTGCCTaGTGGTCGCTGTGGTCTCCCCTGAGCCGGGCACTC +
Preference number: 6 (lower is better)
Translates to: DARAWISRPSSA*WSLWSPLSRAL
Trigger: GAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp CGGCACTCCTGGATACCCCGCTGGGCTGTCCATGAGGCTAGAGGCTaGCCAGCCGATGCCAGAGCATGGATCTCACGTCCGAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RHSWIPRWAVHEARG*PADARAWISRPSSA
Trigger: GGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCAGCGGGGTATCCAGGAGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp GGATACCCCGCTGGGCTGTCCATGAGGCTAGAGGCTTaGCAGCCGATGCCAGAGCATGGATCTCACGTCCGA +
Preference number: 6 (lower is better)
Translates to: GYPAGLSMRLEA*QPMPEHGSHVR
Trigger: TCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCAGCGGGGTATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp TGGATCTCACGTCCGAGTTCTGCCTGCTGGTCGCTGTaGTCTCCCCTGAGCCGGGCACTCTGCACCTCTATC +
Preference number: 6 (lower is better)
Translates to: WISRPSSACWSL*SPLSRALCTSI
Trigger: GATAGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp TGGATACCCCGCTGGGCTGTCCATGAGGCTAGAGGCTaGCCAGCCGATGCCAGAGCATGGATCTCACGTCCG +
Preference number: 6 (lower is better)
Translates to: WIPRWAVHEARG*PADARAWISRP
Trigger: CGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATGGACAGCCCAGCGGGGTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp CAGGAAGGAATGCAGCCCGTGGCACTGGCCGTCTGGCATGTACAGTaGGGCAAACACCACCGCATGAGTTGCCGTCTTGCCCAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: QEGMQPVALAVWHVQ*GKHHRMSCRLAQVA
Trigger: GGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCATTCCTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CGGATCTGCACCAGGAAGGAATGCAGCCCGTGGCACTaGCCGTCTGGCATGTACAGTTGGGCAAACACCACC +
Preference number: 6 (lower is better)
Translates to: RICTRKECSPWH*PSGMYSWANTT
Trigger: GGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCATTCCTTCCTGGTGCAGATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CATGAGGCTAGAGGCTTGCCAGCCGATGCCAGAGCATaGATCTCACGTCCGAGTTCTGCCTGCTGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: HEARGLPADARA*ISRPSSACWSL
Trigger: CAGCGACCAGCAGGCAGAACTCGGACGTGAGATCCATGCTCTGGCATCGGCTGGCAAGCCTCTAGCCTCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp ATGCAGCCCGTGGCACTGGCCGTCTGGCATGTACAGTaGGGCAAACACCACCGCATGAGTTGCCGTCTTGCC +
Preference number: 6 (lower is better)
Translates to: MQPVALAVWHVQ*GKHHRMSCRLA
Trigger: GGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CACCAGGAAGGAATGCAGCCCGTGGCACTGGCCGTCTaGCATGTACAGTTGGGCAAACACCACCGCATGAGT +
Preference number: 6 (lower is better)
Translates to: HQEGMQPVALAV*HVQLGKHHRMS
Trigger: ACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGGCCAGTGCCACGGGCTGCATTCCTTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp GAGCGTGCTGAGCCGCCCGAGCACAGTCCGCAGAGATaGAGACAGACCGGAGCTGTGTATATGTTCGTGGAA +
Preference number: 6 (lower is better)
Translates to: ERAEPPEHSPQR*RQTGAVYMFVE
Trigger: TTCCACGAACATATACACAGCTCCGGTCTGTCTCCATCTCTGCGGACTGTGCTCGGGCGGCTCAGCACGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp GCCAGGGCCAGGGGCCGGCAGCCGTACACCTGGCTGTaGTTTCTTGCTTCAAAGTCACTGCCTCTGGACTTT +
Preference number: 6 (lower is better)
Translates to: ARARGRQPYTWL*FLASKSLPLDF
Trigger: AAAGTCCAGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGGCTGCCGGCCCCTGGCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS GCA 72 bp CAAACACCACCGCATGAGTTGCCGTCTTGCCCAGGTTaGCCACCCAAAATTTGGCAGCCTCGAAATCCGGGG +
Preference number: 6 (lower is better)
Translates to: QTPPHELPSCPG*PPKIWQPRNPG
Trigger: CCCCGGATTTCGAGGCTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp GCTTCTTCCCAATGTCACCGACCATCACCCCCGTCATaGGAAGCAGGGTCTTCGTGTCACGGATCTGCACCA +
Preference number: 6 (lower is better)
Translates to: ASSQCHRPSPPS*EAGSSCHGSAP
Trigger: TGGTGCAGATCCGTGACACGAAGACCCTGCTTCCCATGACGGGGGTGATGGTCGGTGACATTGGGAAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp TCTCTTCCTTATCCGTGGGTCCAAACTGACACCGTGTaGCCGAGAACCGGATGGCTATGGACACGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SLPYPWVQTDTV*PRTGWLWTRPA
Trigger: AGCTGGCCGTGTCCATAGCCATCCGGTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGATAAGGAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp AGGCCAGGGCCAGGGGCCGGCAGCCGTACACCTGGCTGTTGTTTCTaGCTTCAAAGTCACTGCCTCTGGACTTTTTCTCTTGGCAGTATC +
Preference number: 6 (lower is better)
Translates to: RPGPGAGSRTPGCCF*LQSHCLWTFSLGSI
Trigger: GATACTGCCAAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAAGAAACAACAGCCAGGTGTACGGCTGCCGGCCCCTGGCCCTGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS TCA 72 bp CCGTCTGGCATGTACAGTTGGGCAAACACCACCGCATaGGTTGCCGTCTTGCCCAGGTTGCCCACCCAAAAT +
Preference number: 6 (lower is better)
Translates to: PSGMYSWANTTA*VAVLPRLPTQN
Trigger: ATTTTGGGTGGGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGTACATGCCAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp ACAGTTGGGCAAACACCACCGCATGAGTTGCCGTCTTaGCCAGGTTGCCCACCCAAAATTTGGCAGCCTCGA +
Preference number: 6 (lower is better)
Translates to: TVGQTPPHELPS*PGCPPKIWQPR
Trigger: TCGAGGCTGCCAAATTTTGGGTGGGCAACCTGGGCAAGACGGCAACTCATGCGGTGGTGTTTGCCCAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp GACAGACCGGAGCTGTGTATATGTTCGTGGAATCGCTaGATCACGGTGAGTTCCATGAAGGCCAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: DRPELCICSWNR*ITVSSMKARAR
Trigger: CCTGGCCCTGGCCTTCATGGAACTCACCGTGATGCAGCGATTCCACGAACATATACACAGCTCCGGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp ATGACATCTACCAAGGCCACCGCATCGTCTTTCAGCTaGTCACACAGGGTCAGGATGGCGTCCTCCATCGCT +
Preference number: 6 (lower is better)
Translates to: MTSTKATASSFS*SHRVRMASSIA
Trigger: AGCGATGGAGGACGCCATCCTGACCCTGTGTGAGCAGCTGAAAGACGATGCGGTGGCCTTGGTAGATGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp AGCATGTGCTCAGTTCCTTCTGCAGGCAACAGGCCCTaGATGTGGTGGTCCTACCAAGAAGGTCCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: SMCSVPSAGNRP*MWWSYQEGPVC
Trigger: GCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCCTGCAGAAGGAACTGAGCACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS TCA 72 bp AGGACAGGAATCTCTTCCTTATCCGTGGGTCCAAACTaGCACCGTGTGGCCGAGAACCGGATGGCTATGGAC +
Preference number: 6 (lower is better)
Translates to: RTGISSLSVGPN*HRVAENRMAMD
Trigger: GTCCATAGCCATCCGGTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGATAAGGAAGAGATTCCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp GGTCCAAGGCATAGGCAGCCGCCAGGTACGGAAGTATaGGCCATTGCTGCAGTGGATATTCAAGGACAGGAA +
Preference number: 6 (lower is better)
Translates to: GPRHRQPPGTEV*AIAAVDIQGQE
Trigger: TTCCTGTCCTTGAATATCCACTGCAGCAATGGCGCATACTTCCGTACCTGGCGGCTGCCTATGCCTTGGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp TGCTGGTCGCTGTGGTCTCCCCTGAGCCGGGCACTCTaGACCTCTATCAAGTCCATGAAGATTGTCTTAGAG +
Preference number: 6 (lower is better)
Translates to: CWSLWSPLSRAL*TSIKSMKIVLE
Trigger: CTCTAAGACAATCTTCATGGACTTGATAGAGGTGCAGAGTGCCCGGCTCAGGGGAGACCACAGCGACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp TCAGTTCCTTCTGCAGGCAACAGGCCCTGCATGTGGTaGTCCTACCAAGAAGGTCCTGTCTGCAAATGCCTG +
Preference number: 6 (lower is better)
Translates to: SVPSAGNRPCMW*SYQEGPVCKCL
Trigger: CAGGCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCCTGCAGAAGGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CCA 72 bp TGCTCAGTTCCTTCTGCAGGCAACAGGCCCTGCATGTaGTGGTCCTACCAAGAAGGTCCTGTCTGCAAATGC +
Preference number: 6 (lower is better)
Translates to: CSVPSAGNRPCM*WSYQEGPVCKC
Trigger: GCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGGCCTGTTGCCTGCAGAAGGAACTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS TCA 72 bp CAATTGGGGAGTTCAGAACAAAGTCGGAGGGGGCGATaGCATCTACCAAGGCCACCGCATCGTCTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: QLGSSEQSRRGR*HLPRPPHRLSA
Trigger: AGCTGAAAGACGATGCGGTGGCCTTGGTAGATGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp CCCTGCATGTGGTGGTCCTACCAAGAAGGTCCTGTCTaGAAATGCCTGAGAAGTCGACCTCACCATCAGCTT +
Preference number: 6 (lower is better)
Translates to: PCMWWSYQEGPV*KCLRSRPHHQL
Trigger: AAGCTGATGGTGAGGTCGACTTCTCAGGCATTTGCAGACAGGACCTTCTTGGTAGGACCACCACATGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CCA 72 bp ACTTCTCCTGGGTGGACAGAACCTCACCATCAGCTTTaGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: TSPGWTEPHHQL*QLGSSEQSRRG
Trigger: CCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTTCTGTCCACCCAGGAGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS CAA 72 bp ACTGTGGTTCCAAAAACCAACATGTGGAGGACGCATTaGTTGGCCAGGGACCAGTCGTACATGCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TVVPKTNMWRTH*LARDQSYMPRQ
Trigger: CTGCCTGGGCATGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp GGCATAGGCAGCCGCCAGGTACGGAAGTATGCGCCATaGCTGCAGTGGATATTCAAGGACAGGAATCTCTTC +
Preference number: 6 (lower is better)
Translates to: GIGSRQVRKYAP*LQWIFKDRNLF
Trigger: GAAGAGATTCCTGTCCTTGAATATCCACTGCAGCAATGGCGCATACTTCCGTACCTGGCGGCTGCCTATGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp AGGTCCTGTCTGCAAATGCCTGAGAAGTCGACCTCACCATCAGCTTaGGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGGCGATGACA +
Preference number: 6 (lower is better)
Translates to: RSCLQMPEKSTSPSA*AIGEFRTKSEGAMT
Trigger: TGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTCGACTTCTCAGGCATTTGCAGACAGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CAA 90 bp CTCTTCTCCAACTTCTCCTGGGTGGACAGAACCTCACCATCAGCTTaGGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGGCGATGACA +
Preference number: 6 (lower is better)
Translates to: LFSNFSWVDRTSPSA*AIGEFRTKSEGAMT
Trigger: TGTCATCGCCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTTCTGTCCACCCAGGAGAAGTTGGAGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS CCA 72 bp GTGGATATTCAAGGACAGGAATCTCTTCCTTATCCGTaGGTCCAAACTGACACCGTGTGGCCGAGAACCGGA +
Preference number: 6 (lower is better)
Translates to: VDIQGQESLPYP*VQTDTVWPRTG
Trigger: TCCGGTTCTCGGCCACACGGTGTCAGTTTGGACCCACGGATAAGGAAGAGATTCCTGTCCTTGAATATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp TGCAAATGCCTGAGAAGTCGACCTCACCATCAGCTTTaGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: CKCLRSRPHHQL*QLGSSEQSRRG
Trigger: CCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTCGACTTCTCAGGCATTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CAA 72 bp GTGGTTCCAAAAACCAACATGTGGAGGACGCATTTGTaGGCCAGGGACCAGTCGTACATGCCCAGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: VVPKTNMWRTHL*ARDQSYMPRQL
Trigger: TAACTGCCTGGGCATGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp CTGCAAATGCCTGAGAAGTCGACCTCACCATCAGCTTaGGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LQMPEKSTSPSA*AIGEFRTKSEG
Trigger: CCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTCGACTTCTCAGGCATTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000068563.12
CDS CAA 72 bp AACTTCTCCTGGGTGGACAGAACCTCACCATCAGCTTaGGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGG +
Preference number: 6 (lower is better)
Translates to: NFSWVDRTSPSA*AIGEFRTKSEG
Trigger: CCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGGTTCTGTCCACCCAGGAGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202266.4
CDS CAA 90 bp TTCCCAGTCCTGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTTGTaGAACATGGCGAATCCATTATCCAGGCCATTCTGCCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: FPVLSSRFWRGIRTL*NMANPLSRPFCPSF
Trigger: GAAGCTGGGGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAGGACTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp ATATTCCCAGTCCTGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTaGTTGAACATGGCGAATCCATTATCCAGGCCATTCTGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: IFPVLSSRFWRGIRT*LNMANPLSRPFCPS
Trigger: GCTGGGGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAGGACTGGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS GCA 72 bp TTGTTGAACATGGCGAATCCATTATCCAGGCCATTCTaGCCCAGCTTCTTCCCAATGTCACCGACCATCACC +
Preference number: 6 (lower is better)
Translates to: LLNMANPLSRPF*PSFFPMSPTIT
Trigger: GGTGATGGTCGGTGACATTGGGAAGAAGCTGGGGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp AGCCGCCAGGTACGGAAGTATGCGCCATTGCTGCAGTaGATATTCAAGGACAGGAATCTCTTCCTTATCCGT +
Preference number: 6 (lower is better)
Translates to: SRQVRKYAPLLQ*IFKDRNLFLIR
Trigger: ACGGATAAGGAAGAGATTCCTGTCCTTGAATATCCACTGCAGCAATGGCGCATACTTCCGTACCTGGCGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CTGCCCACAGGTTTTTATAGAGCTCACCATCAGCTTTaGCAATTGGGGAGTTCAGAACAAAGTCGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LPTGFYRAHHQL*QLGSSEQSRRG
Trigger: CCCCCTCCGACTTTGTTCTGAACTCCCCAATTGCCAAAGCTGATGGTGAGCTCTATAAAAACCTGTGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000068947.14
ENSMUST00000114237.8
CDS CAA 90 bp ACGAAAACTGTGGTTCCAAAAACCAACATGTGGAGGACGCATTTGTaGGCCAGGGACCAGTCGTACATGCCCAGGCAGTTAATCAGCACT +
Preference number: 6 (lower is better)
Translates to: TKTVVPKTNMWRTHL*ARDQSYMPRQLIST
Trigger: AGTGCTGATTAACTGCCTGGGCATGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCACAGTTTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp GAAACGAAAACTGTGGTTCCAAAAACCAACATGTGGAGGACGCATTaGTTGGCCAGGGACCAGTCGTACATGCCCAGGCAGTTAATCAGC +
Preference number: 6 (lower is better)
Translates to: ETKTVVPKTNMWRTH*LARDQSYMPRQLIS
Trigger: GCTGATTAACTGCCTGGGCATGTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCACAGTTTTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS TCA 72 bp TGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTTGTTaGACATGGCGAATCCATTATCCAGGCCATTCTGCC +
Preference number: 6 (lower is better)
Translates to: CPAGSGEEFELC*TWRIHYPGHSA
Trigger: GGCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CCAGAAACGAAAACTGTGGTTCCAAAAACCAACATGTaGAGGACGCATTTGTTGGCCAGGGACCAGTCGTAC +
Preference number: 6 (lower is better)
Translates to: PETKTVVPKTNM*RTHLLARDQSY
Trigger: GTACGACTGGTCCCTGGCCAACAAATGCGTCCTCCACATGTTGGTTTTTGGAACCACAGTTTTCGTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp CTGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTTGTaGAACATGGCGAATCCATTATCCAGGCCATTCTGC +
Preference number: 6 (lower is better)
Translates to: LSSRFWRGIRTL*NMANPLSRPFC
Trigger: GCAGAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp GTCCTGTCCAGCAGGTTCTGGCGAGGAATTCGAACTTaGTTGAACATGGCGAATCCATTATCCAGGCCATTC +
Preference number: 6 (lower is better)
Translates to: VLSSRFWRGIRT*LNMANPLSRPF
Trigger: GAATGGCCTGGATAATGGATTCGCCATGTTCAACAAAGTTCGAATTCCTCGCCAGAACCTGCTGGACAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CCA 72 bp CAGCAGGACATTGTTGTCACCTTCATAGGTACAGTTTaGGTCGTTGTCGTTTCTGAGGTCACCAAACCGGTT +
Preference number: 6 (lower is better)
Translates to: QQDIVVTFIGTV*VVVVSEVTKPV
Trigger: AACCGGTTTGGTGACCTCAGAAACGACAACGACCCAAACTGTACCTATGAAGGTGACAACAATGTCCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS CAA 90 bp TTTAGCAGTTCCTCTACTTTGAAGAAGCCATACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGTTCTCGTAGCTTCTCTAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FSSSSTLKKPYSKTL*QRRKFSSRSFSRGR
Trigger: CCTGCCCCTAGAGAAGCTACGAGAACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 90 bp GCTGTTGTTTCTTGCTTCAAAGTCACTGCCTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCTCTCTTGGAGCAAGTAGCAAACAAG +
Preference number: 6 (lower is better)
Translates to: AVVSCFKVTASGLFL*AVSPMALLEQVANK
Trigger: CTTGTTTGCTACTTGCTCCAAGAGAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAAGAAACAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS CAA 72 bp TCTTGCTTCAAAGTCACTGCCTCTGGACTTTTTCTCTaGGCAGTATCTCCGATGGCTCTCTTGGAGCAAGTA +
Preference number: 6 (lower is better)
Translates to: SCFKVTASGLFL*AVSPMALLEQV
Trigger: TACTTGCTCCAAGAGAGCCATCGGAGATACTGCCAAGAGAAAAAGTCCAGAGGCAGTGACTTTGAAGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000201106.3
ENSMUST00000202266.4
CDS CAA 90 bp ATCAGCACTAGAATCTTCAGGGGGTTCTTTAGCAGTTCCTCTACTTaGAAGAAGCCATACTCAAAGACCCTCTTGCAGCGAAGGAAGTTC +
Preference number: 6 (lower is better)
Translates to: ISTRIFRGFFSSSST*KKPYSKTLLQRRKF
Trigger: GAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGCTAAAGAACCCCCTGAAGATTCTAGTGCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS TCA 72 bp GAGGGTCATTCTCCAAAGTTGAGAAGATGGTTTTCTTaGAGTGGATTACATCCTGGCCGTCCCAAAAGAGCA +
Preference number: 6 (lower is better)
Translates to: EGHSPKLRRWFS*SGLHPGRPKRA
Trigger: TGCTCTTTTGGGACGGCCAGGATGTAATCCACTTCAAGAAAACCATCTTCTCAACTTTGGAGAATGACCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000156125.8
ENSMUST00000202266.4
CDS TCA 72 bp GAATCTTCAGGGGGTTCTTTAGCAGTTCCTCTACTTTaGAGAAGCCATACTCAAAGACCCTCTTGCAGCGAA +
Preference number: 6 (lower is better)
Translates to: ESSGGSLAVPLL*RSHTQRPSCSE
Trigger: TTCGCTGCAAGAGGGTCTTTGAGTATGGCTTCTTCAAAGTAGAGGAACTGCTAAAGAACCCCCTGAAGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS CAA 72 bp AGAGGGTCATTCTCCAAAGTTGAGAAGATGGTTTTCTaGAAGTGGATTACATCCTGGCCGTCCCAAAAGAGC +
Preference number: 6 (lower is better)
Translates to: RGSFSKVEKMVF*KWITSWPSQKS
Trigger: GCTCTTTTGGGACGGCCAGGATGTAATCCACTTCAAGAAAACCATCTTCTCAACTTTGGAGAATGACCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000156125.8
ENSMUST00000202266.4
CDS CAA 72 bp TCCTCTACTTTGAAGAAGCCATACTCAAAGACCCTCTaGCAGCGAAGGAAGTTCAGTTCTCGTAGCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSTLKKPYSKTL*QRRKFSSRSFS
Trigger: AGAGAAGCTACGAGAACTGAACTTCCTTCGCTGCAAGAGGGTCTTTGAGTATGGCTTCTTCAAAGTAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4
CDS TCA 72 bp AAAATTTGGCAGCCTCGAAATCCGGGGAATGTAAGATaGATTCCTGAGTATCAGGATCATAGTGAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: KIWQPRNPGNVR*IPEYQDHSELS
Trigger: CGACAGCTCACTATGATCCTGATACTCAGGAATTCATCTTACATTCCCCGGATTTCGAGGCTGCCAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068563.12
ENSMUST00000068947.14
ENSMUST00000114237.8
ENSMUST00000114238.5
ENSMUST00000202266.4