Pregenerated sensors for ACOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020777Ensembl transcript IDs: ENSMUST00000066587.12, ENSMUST00000072948.11, ENSMUST00000148601.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AAGACAAGCAACTTAGCTGTGTCAGGAAGTGGGGTCATGGGCGGGTaGATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGA | + |
Preference number: 1 (lower is better) Translates to: KTSNLAVSGSGVMGG*MPLPGRPEWELSPG Trigger: TCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGACCCCACTTCCTGACACAGCTAAGTTGCTTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 90 bp | TTGGTGGGTGGGTGTTTAAGGACTCCTCTTGTTGATATGTTAGTGTaGCAGTTGGTAGGAATGACATACCCACACAGCAGGCAGCAGGGG | + |
Preference number: 1 (lower is better) Translates to: LVGGCLRTPLVDMLV*QLVGMTYPHSRQQG Trigger: CCCCTGCTGCCTGCTGTGTGGGTATGTCATTCCTACCAACTGTCACACTAACATATCAACAAGAGGAGTCCTTAAACACCCACCCACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 90 bp | AGCTTACCACAAAGCCAGCTACTCAGCAAGAACCTCCCCACAGCCTaGACTCATTCTTCAGCTGGCTTAGGATCCATCTTCTCAACTAAC | + |
Preference number: 1 (lower is better) Translates to: SLPQSQLLSKNLPTA*THSSAGLGSIFSTN Trigger: GTTAGTTGAGAAGATGGATCCTAAGCCAGCTGAAGAATGAGTGCAGGCTGTGGGGAGGTTCTTGCTGAGTAGCTGGCTTTGTGGTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 90 bp | GAGCGCTGCTTTCTTGGTGGGTGGGTGTTTAAGGACTCCTCTTGTTaGTATGTTAGTGTGACAGTTGGTAGGAATGACATACCCACACAG | + |
Preference number: 1 (lower is better) Translates to: ERCFLGGWVFKDSSC*YVSVTVGRNDIPTQ Trigger: CTGTGTGGGTATGTCATTCCTACCAACTGTCACACTAACATATCAACAAGAGGAGTCCTTAAACACCCACCCACCAAGAAAGCAGCGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 90 bp | TTCCAGAATATGAATTACTGTCAAATAGAAACCCCACAGGTGACATaGTGCTTACTGTCAATCTTCAGGGATTATCAGTCATTCCAGGAG | + |
Preference number: 1 (lower is better) Translates to: FQNMNYCQIETPQVT*CLLSIFRDYQSFQE Trigger: CTCCTGGAATGACTGATAATCCCTGAAGATTGACAGTAAGCAGCATGTCACCTGTGGGGTTTCTATTTGACAGTAATTCATATTCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 90 bp | CAGAATATGAATTACTGTCAAATAGAAACCCCACAGGTGACATGCTaGTTACTGTCAATCTTCAGGGATTATCAGTCATTCCAGGAGAAA | + |
Preference number: 1 (lower is better) Translates to: QNMNYCQIETPQVTC*LLSIFRDYQSFQEK Trigger: TTTCTCCTGGAATGACTGATAATCCCTGAAGATTGACAGTAAGCAGCATGTCACCTGTGGGGTTTCTATTTGACAGTAATTCATATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR CAA 90 bp | AACTTAGCTGTGTCAGGAAGTGGGGTCATGGGCGGGTGCATGCCATaGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTGCTT | + |
Preference number: 2 (lower is better) Translates to: NLAVSGSGVMGGCMP*PGRPEWELSPGALL Trigger: AAGCAGCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGACCCCACTTCCTGACACAGCTAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAAGTCAGCCACCATGATTaGAGTCCAGGCAACGGCCGA | + |
Preference number: 2 (lower is better) Translates to: SIWEAEDQRSRPLWALSQVSHHD*SPGNGR Trigger: TCGGCCGTTGCCTGGACTTCAATCATGGTGGCTGAC...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR GCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGCGGGTGCATGCCATTaGCAGGAAGACCAGAGTGGG | + |
Preference number: 2 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGAGACH*QEDQSG Trigger: CCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR GCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGGGGTCATGGGCGGGTaGATGCCATTGCCAGGAAGA | + |
Preference number: 2 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGGVMGG*MPLPGR Trigger: TCTTCCTGGCAATGGCATGCACCCGCCCATGACCCC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCAGCTGTGTCAGGAAGTaGGGTCATGGGCGGGTGCAT | + |
Preference number: 2 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGSCVRK*GHGRVH Trigger: ATGCACCCGCCCATGACCCCACTTCCTGACACAGCT...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCTGCACCTACAACACTaGATTCTCATTTCATCTCTA | + |
Preference number: 2 (lower is better) Translates to: AGACHCQEDQSGSLVPERLHLQH*ILISSL Trigger: TAGAGATGAAATGAGAATCCAGTGTTGTAGGTGCAG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACCCATACTTGATCTATaGGGAAAGACTGGTCATTGT | + |
Preference number: 2 (lower is better) Translates to: SIWEAEDQRSRPLWALSQPILDL*GKTGHC Trigger: ACAATGACCAGTCTTTCCTCATAGATCAAGTATGGG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAAAAGGACTCCTCTTGTTaGTATGTTAGTGTGACAGTT | + |
Preference number: 2 (lower is better) Translates to: SIWEAEDQRSRPLWALSQKDSSC*YVSVTV Trigger: AACTGTCACACTAACATATCAACAAGAGGAGTCCTT...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCCCACACACTCACATCTaGGTTTCTATTAGTTTCTGG | + |
Preference number: 2 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGPHTHI*VSISFW Trigger: CCAGAAACTAATAGAAACCCAGATGTGAGTGTGTGG...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR TCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCATAGCTACACAAGTCTaGAGACGATTTCACAAGGAT | + |
Preference number: 2 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGIATQV*RRFHKD Trigger: ATCCTTGTGAAATCGTCTTCAGACTTGTGTAGCTAT...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCACTCAGCAGATGGCTaGGGCCCAGGGCTTTCCTGT | + |
Preference number: 2 (lower is better) Translates to: SGIISHSRRKVKTVSANLHSADG*GPGLSC Trigger: ACAGGAAAGCCCTGGGCCCCAGCCATCTGCTGAGTG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGTCATGGGCGGGTGCATaGCATTGCCAGGAAGACCAG | + |
Preference number: 2 (lower is better) Translates to: SGIISHSRRKVKTVSANLSWAGA*HCQEDQ Trigger: CTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGA...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAATCTATGAGGAAAGACTaGTCATTGTCTCTATTATCT | + |
Preference number: 2 (lower is better) Translates to: SIWEAEDQRSRPLWALSQSMRKD*SLSLLS Trigger: AGATAATAGAGACAATGACCAGTCTTTCCTCATAGA...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCTAACACTCAGCAGATaGCTGGGGCCCAGGGCTTTC | + |
Preference number: 2 (lower is better) Translates to: SGIISHSRRKVKTVSANLLTLSR*LGPRAF Trigger: GAAAGCCCTGGGCCCCAGCCATCTGCTGAGTGTTAG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR TCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAATAGCTACACAAGTCTaGAGACGATTTCACAAGGAT | + |
Preference number: 2 (lower is better) Translates to: TAGSRGICKGHTLTSGFLIATQV*RRFHKD Trigger: ATCCTTGTGAAATCGTCTTCAGACTTGTGTAGCTAT...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTACTGCACCTACAACACTaGATTCTCATTTCATCTCTA | + |
Preference number: 2 (lower is better) Translates to: TAGSRGICKGHTLTSGFLLHLQH*ILISSL Trigger: TAGAGATGAAATGAGAATCCAGTGTTGTAGGTGCAG...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR CAA 90 bp | GCTCATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTaGCTCTATAGCTACACAAGTCTGAAGACGATTTCACAAGGATTA | + |
Preference number: 2 (lower is better) Translates to: AHFSLLIERERPAHH*LYSYTSLKTISQGL Trigger: TAATCCTTGTGAAATCGTCTTCAGACTTGTGTAGCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR CAA 90 bp | TACTTGATCTATGAGGAAAGACTGGTCATTGTCTCTATTATCTCTTaGAGGAGAAGCAAAGCAAGAAAGGGAAGGTCAGCCACCATGATT | + |
Preference number: 2 (lower is better) Translates to: YLIYEERLVIVSIIS*RRSKARKGRSATMI Trigger: AATCATGGTGGCTGACCTTCCCTTTCTTGCTTTGCTTCTCCTCAAAGAGATAATAGAGACAATGACCAGTCTTTCCTCATAGATCAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 72 bp | TGTCAGGAAGTGGGGTCATGGGCGGGTGCATGCCATTaGCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAG | + |
Preference number: 3 (lower is better) Translates to: CQEVGSWAGACH*QEDQSGSLVPE Trigger: CTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGACCCCACTTCCTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CAA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGGCGGGTGCATGCCATaGCCAGGAAGACCAGAGTGG | + |
Preference number: 3 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGGGCMP*PGRPEW Trigger: CCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 72 bp | AACTTAGCTGTGTCAGGAAGTGGGGTCATGGGCGGGTaGATGCCATTGCCAGGAAGACCAGAGTGGGAGCTT | + |
Preference number: 3 (lower is better) Translates to: NLAVSGSGVMGG*MPLPGRPEWEL Trigger: AAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGACCCCACTTCCTGACACAGCTAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR-3UTR CAA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGTCTCTATTATCTCTTaGAGGAGAAGCAAAGCAAGA | + |
Preference number: 3 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGVSIIS*RRSKAR Trigger: TCTTGCTTTGCTTCTCCTCAAAGAGATAATAGAGAC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR CCA 72 bp | CTACGTCGGCCTGGGCTACTACTGCACCTACAACACTaGATTCTCATTTCATCTCTAAGTCTGCTCATTTCT | + |
Preference number: 3 (lower is better) Translates to: LRRPGLLLHLQH*ILISSLSLLIS Trigger: AGAAATGAGCAGACTTAGAGATGAAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 72 bp | TTCCACTCCATTAATACTGTGTTCTCAGAACTGCTCTaGAAGAACTGTTCTCACGATGCCAATGCCACAGAC | + |
Preference number: 3 (lower is better) Translates to: FHSINTVFSELL*KNCSHDANATD Trigger: GTCTGTGGCATTGGCATCGTGAGAACAGTTCTTTCAGAGCAGTTCTGAGAACACAGTATTAATGGAGTGGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 72 bp | ATGAGGAAAGACTGGTCATTGTCTCTATTATCTCTTTaGGGAGAAGCAAAGCAAGAAAGGGAAGGTCAGCCA | + |
Preference number: 3 (lower is better) Translates to: MRKDWSLSLLSL*GEAKQEREGQP Trigger: TGGCTGACCTTCCCTTTCTTGCTTTGCTTCTCCTCAAAGAGATAATAGAGACAATGACCAGTCTTTCCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 72 bp | TTTCTTGGTGGGTGGGTGTTTAAGGACTCCTCTTGTTaGTATGTTAGTGTGACAGTTGGTAGGAATGACATA | + |
Preference number: 3 (lower is better) Translates to: FLGGWVFKDSSC*YVSVTVGRNDI Trigger: TATGTCATTCCTACCAACTGTCACACTAACATATCAACAAGAGGAGTCCTTAAACACCCACCCACCAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 72 bp | AATTACTGTCAAATAGAAACCCCACAGGTGACATGCTaGTTACTGTCAATCTTCAGGGATTATCAGTCATTC | + |
Preference number: 3 (lower is better) Translates to: NYCQIETPQVTC*LLSIFRDYQSF Trigger: GAATGACTGATAATCCCTGAAGATTGACAGTAAGCAGCATGTCACCTGTGGGGTTTCTATTTGACAGTAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR GCA 72 bp | ATGAATTACTGTCAAATAGAAACCCCACAGGTGACATaGTGCTTACTGTCAATCTTCAGGGATTATCAGTCA | + |
Preference number: 3 (lower is better) Translates to: MNYCQIETPQVT*CLLSIFRDYQS Trigger: TGACTGATAATCCCTGAAGATTGACAGTAAGCAGCATGTCACCTGTGGGGTTTCTATTTGACAGTAATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR TCA 72 bp | GTTAAGACTGTGTCAGCAAATCTGATGGCTTTGACTTaGTGTCATTTCCACTCCATTAATACTGTGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: VKTVSANLMALT*CHFHSINTVFS Trigger: TGAGAACACAGTATTAATGGAGTGGAAATGACATCAAGTCAAAGCCATCAGATTTGCTGACACAGTCTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTGGGGCGAGTCACTGTaGGCAGCTCCAGGATCCGAC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERWGESL*AAPGSD Trigger: GTCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAATGGGGCGAGTCACTGTaGGCAGCTCCAGGATCCGAC | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQWGESL*AAPGSD Trigger: GTCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCA...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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3UTR CAA 72 bp | GTGTCAGGAAGTGGGGTCATGGGCGGGTGCATGCCATaGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: VSGSGVMGGCMP*PGRPEWELSPG Trigger: TCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGCCCATGACCCCACTTCCTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAATCTTCGGTGGCCTGGTaGAGCAAGGTGGGCAGGAAC | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQSSVAW*SKVGRN Trigger: GTTCCTGCCCACCTTGCTTCACCAGGCCACCGAAGA...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCCGACTGTTTACCTGTaGCATCTGAGCCCCTGTGAT | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERPTVYL*HLSPCD Trigger: ATCACAGGGGCTCAGATGTCACAGGTAAACAGTCGG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACCTGCTGCTCTTCGGTaGCCTGGTGAAGCAAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQPAALR*PGEARW Trigger: CCACCTTGCTTCACCAGGCCACCGAAGAGCAGCAGG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCAATGGTGCATGCCTTaGACAGACTCTGAGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERQWCMP*TDSELH Trigger: GTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCTCTTCGGTGGCCTGGTaGAGCAAGGTGGGCAGGAAC | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGSSVAW*SKVGRN Trigger: GTTCCTGCCCACCTTGCTTCACCAGGCCACCGAAGA...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGTGGGGCGAGTCACTGTaGGCAGCTCCAGGATCCGAC | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLWGESL*AAPGSD Trigger: GTCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCA...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCAATGGCAATGGTGCATaGCTTGGACAGACTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERNGNGA*LGQTLS Trigger: GCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATT...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAGGCCAGACTGCCACCTaGTGCGGCTGGATACGCTGG | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLGQTAT*CGWIRW Trigger: CCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCC...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCCAGAGTTGGCCAGACTaGCACCTGCTGCGGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGQSWPD*HLLRLD Trigger: ATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTG...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTCTTGGGGTCATATGTaGCAGTGGTTTCCAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERSWGHM*QWFPSL Trigger: GAGGCTTGGAAACCACTGCCACATATGACCCCAAGA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGCCTTCAGCCCAGCTGTaGGGGCATGAAGCTCAGGCA | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLPSAQL*GHEAQA Trigger: TGCCTGAGCTTCATGCCCTCACAGCTGGGCTGAAGG...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTGCACGGCTCTGTCTTaGATCTTGGGGAGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERCTALS*ILGSLS Trigger: AGATAAACTCCCCAAGATTCAAGACAGAGCCGTGCA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCATCGAATGGCAATGGTaGATGCCTTGGACAGACTCT | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERIEWQW*MPWTDS Trigger: AGAGTCTGTCCAAGGCATGCACCATTGCCATTCGAT...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTATTTGGAATCCCACTaGTGTGAGAATAGCCGTGCC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERYLESH*CENSRA Trigger: GGCACGGCTATTCTCACAGCAGTGGGATTCCAAATA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTGGCCAGACTGCCACCTaGTGCGGCTGGATACGCTGG | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFGQTAT*CGWIRW Trigger: CCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCC...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCTTCATAACCAAACTTaGGGCCGATATCCCCAACAG | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERLHNQT*GRYPQQ Trigger: CTGTTGGGGATATCGGCCCCAAGTTTGGTTATGAAG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGAAGGCATAGGCGGTaGCCAGGAGCGGGAAGAGTT | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLGRHRR*PGAGRV Trigger: AACTCTTCCCGCTCCTGGCCACCGCCTATGCCTTCC...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAAAGGAACATGCCCAAGTaGAGGTCCAAAGGCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQRNMPK*RSKGSG Trigger: TCCTGAGCCTTTGGACCTTCACTTGGGCATGTTCCT...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTTATACTGCTGCGTCTaGAAATCCAAAATCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERLYCCV*KSKIWG Trigger: GCCCCAGATTTTGGATTTTCAGACGCAGCAGTATAA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAAGGACTATCGCATGATTaGAAGTCTTCCCAAGCCCCC | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQGLSHD*KSSQAP Trigger: GGGGGCTTGGGAAGACTTCCAATCATGCGATAGTCC...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAGATTCCAGGCCGGCATaGAGAAACGCTCCTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLDSRPA*RNAPAA Trigger: AGCAGCAGGAGCGTTTCTTCATGCCGGCCTGGAATC...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCCTTCAGCCCAGCTGTaGGGGCATGAAGCTCAGGCA | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFPSAQL*GHEAQA Trigger: TGCCTGAGCTTCATGCCCTCACAGCTGGGCTGAAGG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCTACCATCCAAGATGTaGGTGATTAACTCTGGATTG | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERLPSKM*VINSGL Trigger: CAATCCAGAGTTAATCACGCACATCTTGGATGGTAG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR GCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQPSGRR*QLSGVL Trigger: AAGAACTCCAGATAATTGGCACCTACGCCCAGACGG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGGACTATCGCATGATTaGAAGTCTTCCCAAGCCCCC | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGGLSHD*KSSQAP Trigger: GGGGGCTTGGGAAGACTTCCAATCATGCGATAGTCC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCCCAACAGTGATGCCTaGCAGAGGCTTGTGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFPNSDA*QRLVGP Trigger: GGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGAATGTCCACCAGAGTTaGCCAGACTGCCACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLNVHQS*PDCHLL Trigger: CAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATT...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAATCAGGATGCCCTCGGTaGACAGAGTTTTTAAACCAC | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQSGCPR*TEFLNH Trigger: GTGGTTTAAAAACTCTGTGCACCGAGGGCATCCTGA...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066587.12 |
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CDS-3UTR CCA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCCTCATGTTGGAAGTCTaGATCGTTCAGAATCAAGTT | + |
Preference number: 4 (lower is better) Translates to: AGACHCQEDQSGSLVPERLMLEV*IVQNQV Trigger: AACTTGATTCTGAACGATCCAGACTTCCAACATGAG...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGACTATCGCATGATTaGAAGTCTTCCCAAGCCCCC | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLGLSHD*KSSQAP Trigger: GGGGGCTTGGGAAGACTTCCAATCATGCGATAGTCC...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACTTCATAACCAAACTTaGGGCCGATATCCCCAACAG | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQLHNQT*GRYPQQ Trigger: CTGTTGGGGATATCGGCCCCAAGTTTGGTTATGAAG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACCGTCAGGCTTCACCTaGGCATATTTCATCAACATG | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQPSGFT*AYFINM Trigger: CATGTTGATGAAATATGCCCAGGTGAAGCCTGACGG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCGCCTTGGACAGACTCTaGGCTGCACTTCCCACGAGG | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLALDRL*AALPTR Trigger: CCTCGTGGGAAGTGCAGCTCAGAGTCTGTCCAAGGC...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCCCTTCAGCCCAGCTGTaGGGGCATGAAGCTCAGGCA | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLPSAQL*GHEAQA Trigger: TGCCTGAGCTTCATGCCCTCACAGCTGGGCTGAAGG...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCTGCACGGCTCTGTCTTaGATCTTGGGGAGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGCTALS*ILGSLS Trigger: AGATAAACTCCCCAAGATTCAAGACAGAGCCGTGCA...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGAATGGCAATGGTGCATaGCTTGGACAGACTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLNGNGA*LGQTLS Trigger: GCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATT...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACTTGGGGAGTTTATCTaGAAAGACCTTAACGGTCAC | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQLGEFI*KDLNGH Trigger: GTGACCGTTAAGGTCTTTGCAGATAAACTCCCCAAG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCTCACTCAGGTCGCCTTaGCCAATGCTCTCATTAATC | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGSLRSP*PMLSLI Trigger: GATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGA...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGATCGAATGGCAATGGTaGATGCCTTGGACAGACTCT | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLIEWQW*MPWTDS Trigger: AGAGTCTGTCCAAGGCATGCACCATTGCCATTCGAT...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGATGGAAGTCACAGTTaGGCTGTTGAGAATGAACTC | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGDGSHS*AVENEL Trigger: GAGTTCATTCTCAACAGCCCAACTGTGACTTCCATC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAAACCTTACGAAAACCATaGTCCCATATGTCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQTLRKP*SHMSAC Trigger: ACAAGCTGACATATGGGACCATGGTTTTCGTAAGGT...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCAATGGTGCATGCCTTaGACAGACTCTGAGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFQWCMP*TDSELH Trigger: GTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACGTGACGTAAATATTTaGAATCCCACTGCTGTGAGA | + |
Preference number: 4 (lower is better) Translates to: SIWEAEDQRSRPLWALSQRDVNI*NPTAVR Trigger: TCTCACAGCAGTGGGATTCCAAATATTTACGTCACG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCCAATTTCTACCAATCTaGCTGCACGTAGCTTGTAGG | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGQFLPI*LHVACR Trigger: CCTACAAGCTACGTGCAGCCAGATTGGTAGAAATTG...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCTCAGTGGGGACTTCTTaGCCCACTCAAACAAGTTTT | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGSVGTS*PTQTSF Trigger: AAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGA...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGTTATACTGCTGCGTCTaGAAATCCAAAATCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLLYCCV*KSKIWG Trigger: GCCCCAGATTTTGGATTTTCAGACGCAGCAGTATAA...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTATGCACGGCTCTGTCTTaGATCTTGGGGAGTTTATCT | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLCTALS*ILGSLS Trigger: AGATAAACTCCCCAAGATTCAAGACAGAGCCGTGCA...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTATTTACCTGTGACATCTaGGCCCCTGTGATGATGTTC | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLFTCDI*APVMMF Trigger: GAACATCATCACAGGGGCTCAGATGTCACAGGTAAA...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTACTTCAGGGTCTGCGATaGCAAATTCCCTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLLQGLR*QIPSSS Trigger: AGAAGATGAGGGAATTTGGCATCGCAGACCCTGAAG...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
||
CDS-3UTR CCA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCACCTTACGAAAACCATaGTCCCATATGTCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGTLRKP*SHMSAC Trigger: ACAAGCTGACATATGGGACCATGGTTTTCGTAAGGT...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCAATGTCCACCAGAGTTaGCCAGACTGCCACCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLNVHQS*PDCHLL Trigger: CAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATT...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR TCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCAGGAACATGCCCAAGTaGAGGTCCAAAGGCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLRNMPK*RSKGSG Trigger: TCCTGAGCCTTTGGACCTTCACTTGGGCATGTTCCT...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
||
CDS-3UTR TCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTGCCTTGGACAGACTCTaGGCTGCACTTCCCACGAGG | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPALDRL*AALPTR Trigger: CCTCGTGGGAAGTGCAGCTCAGAGTCTGTCCAAGGC...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR TCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCCCGACTGTTTACCTGTaGCATCTGAGCCCCTGTGAT | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLPTVYL*HLSPCD Trigger: ATCACAGGGGCTCAGATGTCACAGGTAAACAGTCGG...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR GCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCAGAGTTGGCCAGACTaGCACCTGCTGCGGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSQSWPD*HLLRLD Trigger: ATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCAGAGTTGGCCAGACTaGCACCTGCTGCGGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLQSWPD*HLLRLD Trigger: ATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR GCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGAGTTTTCATACACATTaGCATCATAGCGGCCGAGAA | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLSFHTH*HHSGRE Trigger: TTCTCGGCCGCTATGATGGCAATGTGTATGAAAACT...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCCTGCTGCTCTTCGGTaGCCTGGTGAAGCAAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLPAALR*PGEARW Trigger: CCACCTTGCTTCACCAGGCCACCGAAGAGCAGCAGG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGTTGAGAATGAACTCTTaGGTCTTGGGGTCATATGTG | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLLRMNS*VLGSYV Trigger: CACATATGACCCCAAGACCCAAGAGTTCATTCTCAA...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAGATGGAAGTCACAGTTaGGCTGTTGAGAATGAACTC | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLDGSHS*AVENEL Trigger: GAGTTCATTCTCAACAGCCCAACTGTGACTTCCATC...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCCCAACAGTGATGCCTaGCAGAGGCTTGTGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLPNSDA*QRLVGP Trigger: GGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTCCCAACAGTGATGCCTaGCAGAGGCTTGTGGGTCCC | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPPNSDA*QRLVGP Trigger: GGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGG...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGGGAAGGCATAGGCGGTaGCCAGGAGCGGGAAGAGTT | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLGRHRR*PGAGRV Trigger: AACTCTTCCCGCTCCTGGCCACCGCCTATGCCTTCC...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCGGAAGGCATAGGCGGTaGCCAGGAGCGGGAAGAGTT | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSGRHRR*PGAGRV Trigger: AACTCTTCCCGCTCCTGGCCACCGCCTATGCCTTCC...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
||
CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGCGTGACGTAAATATTTaGAATCCCACTGCTGTGAGA | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLRDVNI*NPTAVR Trigger: TCTCACAGCAGTGGGATTCCAAATATTTACGTCACG...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCTCCACGCCACTTCCTTaGTCTTCCTGTGACTCACTT | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLSTPLP*SSCDSL Trigger: AAGTGAGTCACAGGAAGAGCAAGGAAGTGGCGTGGA...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAAGTTTTCATACACATTaGCATCATAGCGGCCGAGAA | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLSFHTH*HHSGRE Trigger: TTCTCGGCCGCTATGATGGCAATGTGTATGAAAACT...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCTCTTGGGGTCATATGTaGCAGTGGTTTCCAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLSWGHM*QWFPSL Trigger: GAGGCTTGGAAACCACTGCCACATATGACCCCAAGA...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAACCTTACGAAAACCATaGTCCCATATGTCAGCTTGT | + |
Preference number: 4 (lower is better) Translates to: TAGSRGICKGHTLTSGFLTLRKP*SHMSAC Trigger: ACAAGCTGACATATGGGACCATGGTTTTCGTAAGGT...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGCTCTGTCTTGAATCTTaGGGAGTTTATCTGCAAAGA | + |
Preference number: 4 (lower is better) Translates to: IPTQQAAGAYVRATHSHLLCLES*GVYLQR Trigger: TCTTTGCAGATAAACTCCCCAAGATTCAAGACAGAG...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCTTTACCTGTGACATCTaGGCCCCTGTGATGATGTTC | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLFTCDI*APVMMF Trigger: GAACATCATCACAGGGGCTCAGATGTCACAGGTAAA...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCTACCATCCAAGATGTaGGTGATTAACTCTGGATTG | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFLPSKM*VINSGL Trigger: CAATCCAGAGTTAATCACGCACATCTTGGATGGTAG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCGGTCATATGTGGCAGTaGTTTCCAAGCCTCGAAGAT | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLGHMWQ*FPSLED Trigger: ATCTTCGAGGCTTGGAAACCACTGCCACATATGACC...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCTCACTCAGGTCGCCTTaGCCAATGCTCTCATTAATC | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLSLRSP*PMLSLI Trigger: GATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGA...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCGTGACGTAAATATTTaGAATCCCACTGCTGTGAGA | + |
Preference number: 4 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFRDVNI*NPTAVR Trigger: TCTCACAGCAGTGGGATTCCAAATATTTACGTCACG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTCCGACTGTTTACCTGTaGCATCTGAGCCCCTGTGAT | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPPTVYL*HLSPCD Trigger: ATCACAGGGGCTCAGATGTCACAGGTAAACAGTCGG...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCGATTTCTTCAGGGTCTaGGATGCCAAATTCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLDFFRV*DAKFPH Trigger: ATGAGGGAATTTGGCATCGCAGACCCTGAAGAAATC...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR GCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCAGGTGGGCAGGAACATaGCCAAGTGAAGGTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSRWAGT*PSEGPK Trigger: CTTTGGACCTTCACTTGGGCATGTTCCTGCCCACCT...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCAATGGTGCATGCCTTaGACAGACTCTGAGCTGCAC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSQWCMP*TDSELH Trigger: GTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCAATGGCAATGGTGCATaGCTTGGACAGACTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSNGNGA*LGQTLS Trigger: GCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATT...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTTCCACGCCACTTCCTTaGTCTTCCTGTGACTCACTT | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPSTPLP*SSCDSL Trigger: AAGTGAGTCACAGGAAGAGCAAGGAAGTGGCGTGGA...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGTCCACGCCACTTCCTTaGTCTTCCTGTGACTCACTT | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLSTPLP*SSCDSL Trigger: AAGTGAGTCACAGGAAGAGCAAGGAAGTGGCGTGGA...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPPSGRR*QLSGVL Trigger: AAGAACTCCAGATAATTGGCACCTACGCCCAGACGG...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTTCTTGGGGTCATATGTaGCAGTGGTTTCCAAGCCTC | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPSWGHM*QWFPSL Trigger: GAGGCTTGGAAACCACTGCCACATATGACCCCAAGA...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCTTGAGAATGAACTCTTaGGTCTTGGGGTCATATGTG | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLLRMNS*VLGSYV Trigger: CACATATGACCCCAAGACCCAAGAGTTCATTCTCAA...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCTTTACCTGTGACATCTaGGCCCCTGTGATGATGTTC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSFTCDI*APVMMF Trigger: GAACATCATCACAGGGGCTCAGATGTCACAGGTAAA...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTCTTCAGGGTCTGCGATaGCAAATTCCCTCATCTTCT | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPLQGLR*QIPSSS Trigger: AGAAGATGAGGGAATTTGGCATCGCAGACCCTGAAG...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGATCGAATGGCAATGGTaGATGCCTTGGACAGACTCT | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLIEWQW*MPWTDS Trigger: AGAGTCTGTCCAAGGCATGCACCATTGCCATTCGAT...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGTATTTGGAATCCCACTaGTGTGAGAATAGCCGTGCC | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLYLESH*CENSRA Trigger: GGCACGGCTATTCTCACAGCAGTGGGATTCCAAATA...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCCGTCAGGCTTCACCTaGGCATATTTCATCAACATG | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSPSGFT*AYFINM Trigger: CATGTTGATGAAATATGCCCAGGTGAAGCCTGACGG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCTCACTCAGGTCGCCTTaGCCAATGCTCTCATTAATC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSSLRSP*PMLSLI Trigger: GATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGA...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCCTCTGTCTTGAATCTTaGGGAGTTTATCTGCAAAGA | + |
Preference number: 4 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLLCLES*GVYLQR Trigger: TCTTTGCAGATAAACTCCCCAAGATTCAAGACAGAG...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR TCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTTTATACTGCTGCGTCTaGAAATCCAAAATCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPLYCCV*KSKIWG Trigger: GCCCCAGATTTTGGATTTTCAGACGCAGCAGTATAA...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCTTGGGGAGTTTATCTaGAAAGACCTTAACGGTCAC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSLGEFI*KDLNGH Trigger: GTGACCGTTAAGGTCTTTGCAGATAAACTCCCCAAG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTCTTGGGGAGTTTATCTaGAAAGACCTTAACGGTCAC | + |
Preference number: 4 (lower is better) Translates to: TSLKTISQGLVNQGEIRPLGEFI*KDLNGH Trigger: GTGACCGTTAAGGTCTTTGCAGATAAACTCCCCAAG...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCGATGGAAGTCACAGTTaGGCTGTTGAGAATGAACTC | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSDGSHS*AVENEL Trigger: GAGTTCATTCTCAACAGCCCAACTGTGACTTCCATC...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCAATTTCTACCAATCTaGCTGCACGTAGCTTGTAGG | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSQFLPI*LHVACR Trigger: CCTACAAGCTACGTGCAGCCAGATTGGTAGAAATTG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGCAATTTCTACCAATCTaGCTGCACGTAGCTTGTAGG | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLQFLPI*LHVACR Trigger: CCTACAAGCTACGTGCAGCCAGATTGGTAGAAATTG...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCTCAGTGGGGACTTCTTaGCCCACTCAAACAAGTTTT | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSSVGTS*PTQTSF Trigger: AAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGA...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGTCAGTGGGGACTTCTTaGCCCACTCAAACAAGTTTT | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLSVGTS*PTQTSF Trigger: AAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGA...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR GCA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGAGTTTTCATACACATTaGCATCATAGCGGCCGAGAA | + |
Preference number: 4 (lower is better) Translates to: SGIISHSRRKVKTVSANLSFHTH*HHSGRE Trigger: TTCTCGGCCGCTATGATGGCAATGTGTATGAAAACT...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCTTGAGAATGAACTCTTaGGTCTTGGGGTCATATGTG | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSLRMNS*VLGSYV Trigger: CACATATGACCCCAAGACCCAAGAGTTCATTCTCAA...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCTCATGTTGGAAGTCTaGATCGTTCAGAATCAAGTT | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSLMLEV*IVQNQV Trigger: AACTTGATTCTGAACGATCCAGACTTCCAACATGAG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR CCA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCTCTGTCTTGAATCTTaGGGAGTTTATCTGCAAAGA | + |
Preference number: 4 (lower is better) Translates to: HFSLLIERERPAHHLLYSLCLES*GVYLQR Trigger: TCTTTGCAGATAAACTCCCCAAGATTCAAGACAGAG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCGGCAGTGCGCCTCACTaGCGCGAACAAGGTCGACAG | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERGSAPH*REQGRQ Trigger: CTGTCGACCTTGTTCGCGCAAGTGAGGCGCACTGCC...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCATGCCTGGCAGAGGCTaGTGGGTCCCAATCTCACGG | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERMPGRG*WVPISR Trigger: CCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCAT...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCACCAAAGCCACAGCGTaGGGGCGAGTCACTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERTKATA*GRVTVS Trigger: GCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGT...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | CCTGCTGCTCTTCGGTGGCCTGGTGAAGCAAGGTGGGCAGGAACATaGCCAAGTGAAGGTCCAAAGGCTCAGGATGCCCTCGGTGCACAG | + |
Preference number: 5 (lower is better) Translates to: PAALRWPGEARWAGT*PSEGPKAQDALGAQ Trigger: CTGTGCACCGAGGGCATCCTGAGCCTTTGGACCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTCACCAGGCCACCGAAGAGCAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS CCA 90 bp | TCCACCAGAGTTGGCCAGACTGCCACCTGCTGCGGCTGGATACGCTaGCTCGGCAGGTCATTCAAGTACGACACCATACCACCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: STRVGQTATCCGWIR*LGRSFKYDTIPPTS Trigger: GCTGGTGGGTGGTATGGTGTCGTACTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | GTAGGCTTCTGTCAGGCTGTCCAGGCTGTTAATGTCCACCAGAGTTaGCCAGACTGCCACCTGCTGCGGCTGGATACGCTGGCTCGGCAG | + |
Preference number: 5 (lower is better) Translates to: VGFCQAVQAVNVHQS*PDCHLLRLDTLARQ Trigger: CTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAACAGCCTGGACAGCCTGACAGAAGCCTAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTCGTGGACCTCTGTCTaGTTCAGTGGGGACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERSWTSV*FSGDFL Trigger: CAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | ATTTCTCGACGGCGCCGGGTGTTCTCCGGACTACCATCCAAGATGTaGGTGATTAACTCTGGATTGAAGGTGGCGGCGGCCCGCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: ISRRRRVFSGLPSKM*VINSGLKVAAARSL Trigger: CAAGGAGCGGGCCGCCGCCACCTTCAATCCAGAGTTAATCACGCACATCTTGGATGGTAGTCCGGAGAACACCCGGCGCCGTCGAGAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS GCA 90 bp | TCCAGGCTGTTAATGTCCACCAGAGTTGGCCAGACTGCCACCTGCTaGGGCTGGATACGCTGGCTCGGCAGGTCATTCAAGTACGACACC | + |
Preference number: 5 (lower is better) Translates to: SRLLMSTRVGQTATC*GWIRWLGRSFKYDT Trigger: GGTGTCGTACTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAACAGCCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | TGCCCTCGGTGCACAGAGCGTGGCCCATCTCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTTGGGACGGGTGCATCCATTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: CPRCTERGPSPSGRR*QLSGVLGTGASISP Trigger: AGGAGAAATGGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAGATGGGCCACGCTCTGTGCACCGAGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCATGCCTGGCAGAGGCTaGTGGGTCCCAATCTCACGG | + |
Preference number: 5 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGMPGRG*WVPISR Trigger: CCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCAT...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGCAGTGCGCCTCACTaGCGCGAACAAGGTCGACAG | + |
Preference number: 5 (lower is better) Translates to: IPTQQAAGAYVRATHSHLGSAPH*REQGRQ Trigger: CTGTCGACCTTGTTCGCGCAAGTGAGGCGCACTGCC...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCACCAAAGCCACAGCGTaGGGGCGAGTCACTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGTKATA*GRVTVS Trigger: GCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGT...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGACCAAAGCCACAGCGTaGGGGCGAGTCACTGTGAGC | + |
Preference number: 5 (lower is better) Translates to: IPTQQAAGAYVRATHSHLTKATA*GRVTVS Trigger: GCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGT...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS TCA 90 bp | AGTCAAAGGCATCCACCAAAGCCACAGCGTTGGGGCGAGTCACTGTaGGCAGCTCCAGGATCCGACTGTTTACCTGTGACATCTGAGCCC | + |
Preference number: 5 (lower is better) Translates to: SQRHPPKPQRWGESL*AAPGSDCLPVTSEP Trigger: GGGCTCAGATGTCACAGGTAAACAGTCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGTGGATGCCTTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | CTCCCCCTCGAAGGTGCAGGCCGGGGTAAACGTGACGTAAATATTTaGAATCCCACTGCTGTGAGAATAGCCGTGCCCACCGCAAGCCAT | + |
Preference number: 5 (lower is better) Translates to: LPLEGAGRGKRDVNI*NPTAVRIAVPTASH Trigger: ATGGCTTGCGGTGGGCACGGCTATTCTCACAGCAGTGGGATTCCAAATATTTACGTCACGTTTACCCCGGCCTGCACCTTCGAGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | CTGTTAATGTCCACCAGAGTTGGCCAGACTGCCACCTGCTGCGGCTaGATACGCTGGCTCGGCAGGTCATTCAAGTACGACACCATACCA | + |
Preference number: 5 (lower is better) Translates to: LLMSTRVGQTATCCG*IRWLGRSFKYDTIP Trigger: TGGTATGGTGTCGTACTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAACAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCGTTGAGAATGAACTCTaGGGTCTTGGGGTCATATGT | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERVENEL*GLGVIC Trigger: ACATATGACCCCAAGACCCAAGAGTTCATTCTCAAC...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GCGGGTGCATGCCATTGCCAGGAAGACCAGAGTGGGAGCTTAGTCCCGGAGCGCTCTTCGATACCAGCATaGGCTGTCCAGGTAGTAAAA | + |
Preference number: 5 (lower is better) Translates to: AGACHCQEDQSGSLVPERSSIPA*AVQVVK Trigger: TTTTACTACCTGGACAGCCAATGCTGGTATCGAAGA...GCGCTCCGGGACTAAGCTCCCACTCTGGTCTTCCTGGCAATGGCATGCACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | AGCCTCGAAGATGAGTTCCGTGGCCCATCTCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTTGGGACGGGTGCATCCATTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: SLEDEFRGPSPSGRR*QLSGVLGTGASISP Trigger: AGGAGAAATGGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAGATGGGCCACGGAACTCATCTTCGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072948.11 |
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CDS CCA 90 bp | AACTTGGGGCCGATATCCCCAACAGTGATGCCTGGCAGAGGCTTGTaGGTCCCAATCTCACGGATAGGGACAACAAAGGCATGTAACCCG | + |
Preference number: 5 (lower is better) Translates to: NLGPISPTVMPGRGL*VPISRIGTTKACNP Trigger: CGGGTTACATGCCTTTGTTGTCCCTATCCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGGGATATCGGCCCCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCCCCCAGGCCACCACTaGATGGAAGTCACAGTTGGG | + |
Preference number: 5 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFPPGHH*MEVTVG Trigger: CCCAACTGTGACTTCCATCAAGTGGTGGCCTGGGGG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | AGCATCTGGGAGGCTGAGGATCAGAGGTCAAGGCCACTCTGGGCCCTGTCTCAACTCACTCAGGTCGCCTaGGCCAATGCTCTCATTAAT | + |
Preference number: 5 (lower is better) Translates to: SIWEAEDQRSRPLWALSQLTQVA*ANALIN Trigger: ATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGAG...TTGAGACAGGGCCCAGAGTGGCCTTGACCTCTGATCCTCAGCCTCCCAGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGTCGTGGACCTCTGTCTaGTTCAGTGGGGACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: IPTQQAAGAYVRATHSHLSWTSV*FSGDFL Trigger: CAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGA...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | ATCTGCAAAGACCTTAACGGTCACGTAGTGGCAGTGCGCCTCACTTaGGCGAACAAGGTCGACAGAAGTCAAGTTCCACGCCACTTCCTT | + |
Preference number: 5 (lower is better) Translates to: ICKDLNGHVVAVRLT*ANKVDRSQVPRHFL Trigger: AAGGAAGTGGCGTGGAACTTGACTTCTGTCGACCTTGTTCGCGCAAGTGAGGCGCACTGCCACTACGTGACCGTTAAGGTCTTTGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | CTCTTCATAACCAAACTTGGGGCCGATATCCCCAACAGTGATGCCTaGCAGAGGCTTGTGGGTCCCAATCTCACGGATAGGGACAACAAA | + |
Preference number: 5 (lower is better) Translates to: LFITKLGADIPNSDA*QRLVGPNLTDRDNK Trigger: TTTGTTGTCCCTATCCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGGGATATCGGCCCCAAGTTTGGTTATGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | GGCTTAGGATCCATCTTCTCAACTAACACTCAGCAGATGGCTGGGGCCCAGGGCGGGCCTGAAGGTTTTTaGCAGCAATTTCTACCAATC | + |
Preference number: 5 (lower is better) Translates to: GLGSIFSTNTQQMAGAQGGPEGF*QQFLPI Trigger: GATTGGTAGAAATTGCTGCAAAAAACCTTCAGGCCC...GCCCTGGGCCCCAGCCATCTGCTGAGTGTTAGTTGAGAAGATGGATCCTAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | ACTGTATCGAATGGCAATGGTGCATGCCTTGGACAGACTCTGAGCTaGACTTCCCACGAGGAAGGACCTTACGAAAACCATGGTCCCATA | + |
Preference number: 5 (lower is better) Translates to: TVSNGNGACLGQTLS*TSHEEGPYENHGPI Trigger: TATGGGACCATGGTTTTCGTAAGGTCCTTCCTCGTGGGAAGTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATTCGATACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | ACGCTGGCTTCGAGTGAGGAAGTTATAGTCCTCATGTTGGAAGTCTaGATCGTTCAGAATCAAGTTCTCGATTTCTCGACGGCGCCGGGT | + |
Preference number: 5 (lower is better) Translates to: TLASSEEVIVLMLEV*IVQNQVLDFSTAPG Trigger: ACCCGGCGCCGTCGAGAAATCGAGAACTTGATTCTGAACGATCCAGACTTCCAACATGAGGACTATAACTTCCTCACTCGAAGCCAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS-3UTR CAA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTCTCACTCAGGTCGCCTaGGCCAATGCTCTCATTAAT | + |
Preference number: 5 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFLTQVA*ANALIN Trigger: ATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGAG...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ATACCCACACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGTCTTCGATACCAGCATaGGCTGTCCAGGTAGTAAAA | + |
Preference number: 5 (lower is better) Translates to: IPTQQAAGAYVRATHSHLSSIPA*AVQVVK Trigger: TTTTACTACCTGGACAGCCAATGCTGGTATCGAAGA...CAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGTGTGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | CACCACTTGATGGAAGTCACAGTTGGGCTGTTGAGAATGAACTCTTaGGTCTTGGGGTCATATGTGGCAGTGGTTTCCAAGCCTCGAAGA | + |
Preference number: 5 (lower is better) Translates to: HHLMEVTVGLLRMNS*VLGSYVAVVSKPRR Trigger: TCTTCGAGGCTTGGAAACCACTGCCACATATGACCCCAAGACCCAAGAGTTCATTCTCAACAGCCCAACTGTGACTTCCATCAAGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCCCCCCAGGCCACCACTaGATGGAAGTCACAGTTGGG | + |
Preference number: 5 (lower is better) Translates to: HFSLLIERERPAHHLLYSPPGHH*MEVTVG Trigger: CCCAACTGTGACTTCCATCAAGTGGTGGCCTGGGGG...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCATGCCTGGCAGAGGCTaGTGGGTCCCAATCTCACGG | + |
Preference number: 5 (lower is better) Translates to: HFSLLIERERPAHHLLYSMPGRG*WVPISR Trigger: CCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCAT...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ACAGCAGGCAGCAGGGGCATATGTAAGGGCCACACACTCACATCTGGGTTTCTAGGGCCTGAAGGTTTTTaGCAGCAATTTCTACCAATC | + |
Preference number: 5 (lower is better) Translates to: TAGSRGICKGHTLTSGFLGPEGF*QQFLPI Trigger: GATTGGTAGAAATTGCTGCAAAAAACCTTCAGGCCC...TAGAAACCCAGATGTGAGTGTGTGGCCCTTACATATGCCCCTGCTGCCTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | GACTCTGAGCTGCACTTCCCACGAGGAAGGACCTTACGAAAACCATaGTCCCATATGTCAGCTTGTTACTCAGAGGTTTTACATACGTGC | + |
Preference number: 5 (lower is better) Translates to: DSELHFPRGRTLRKP*SHMSACYSEVLHTC Trigger: GCACGTATGTAAAACCTCTGAGTAACAAGCTGACATATGGGACCATGGTTTTCGTAAGGTCCTTCCTCGTGGGAAGTGCAGCTCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CTCTTAGTGGTAGATCAGAAAGTGCTAGGCAAGAAAGCCTGGAAAGTCCAGCTCGTCACAGTTGGGCTGTaGAGAATGAACTCTTGGGTC | + |
Preference number: 5 (lower is better) Translates to: LLVVDQKVLGKKAWKVQLVTVGL*RMNSWV Trigger: GACCCAAGAGTTCATTCTCAACAGCCCAACTGTGAC...GAGCTGGACTTTCCAGGCTTTCTTGCCTAGCACTTTCTGATCTACCACTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 90 bp | CCCTCGGTGCACAGAGTTTTTAAACCACATGATTTCTTCAGGGTCTaGGATGCCAAATTCCCTCATCTTCTTCACCATGGTGGCACTCTT | + |
Preference number: 5 (lower is better) Translates to: PSVHRVFKPHDFFRV*DAKFPHLLHHGGTL Trigger: AAGAGTGCCACCATGGTGAAGAAGATGAGGGAATTTGGCATCGCAGACCCTGAAGAAATCATGTGGTTTAAAAACTCTGTGCACCGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066587.12 |
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CDS-3UTR CAA 90 bp | AGGTCCTACGTCGGCCTGGGCTACTACTGCACCTACAACACTGGATTCTCATTTGTCCCATATGTCAGCTaGTTACTCAGAGGTTTTACA | + |
Preference number: 5 (lower is better) Translates to: RSYVGLGYYCTYNTGFSFVPYVS*LLRGFT Trigger: TGTAAAACCTCTGAGTAACAAGCTGACATATGGGAC...AAATGAGAATCCAGTGTTGTAGGTGCAGTAGTAGCCCAGGCCGACGTAGGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTGTTCCTCAGCACGGCTaGCACGGCTCTGTCTTGAAT | + |
Preference number: 5 (lower is better) Translates to: TSLKTISQGLVNQGEIRPVPQHG*HGSVLN Trigger: ATTCAAGACAGAGCCGTGCAAGCCGTGCTGAGGAAC...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCGTTCCTCAGCACGGCTaGCACGGCTCTGTCTTGAAT | + |
Preference number: 5 (lower is better) Translates to: HFSLLIERERPAHHLLYSVPQHG*HGSVLN Trigger: ATTCAAGACAGAGCCGTGCAAGCCGTGCTGAGGAAC...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGGTTCCTCAGCACGGCTaGCACGGCTCTGTCTTGAAT | + |
Preference number: 5 (lower is better) Translates to: SGIISHSRRKVKTVSANLVPQHG*HGSVLN Trigger: ATTCAAGACAGAGCCGTGCAAGCCGTGCTGAGGAAC...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 90 bp | TGTAGTAAGATTCGTGGACCTCTGTCTTGTTCAGTGGGGACTTCTTaGCCCACTCAAACAAGTTTTCATACACATTGCCATCATAGCGGC | + |
Preference number: 5 (lower is better) Translates to: CSKIRGPLSCSVGTS*PTQTSFHTHCHHSG Trigger: GCCGCTATGATGGCAATGTGTATGAAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGAATCTTACTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCTCGTGGACCTCTGTCTaGTTCAGTGGGGACTTCTTG | + |
Preference number: 5 (lower is better) Translates to: HFSLLIERERPAHHLLYSSWTSV*FSGDFL Trigger: CAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGA...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGGTCACAGTTGGGCTGTaGAGAATGAACTCTTGGGTC | + |
Preference number: 5 (lower is better) Translates to: SGIISHSRRKVKTVSANLVTVGL*RMNSWV Trigger: GACCCAAGAGTTCATTCTCAACAGCCCAACTGTGAC...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGGTTGAGAATGAACTCTaGGGTCTTGGGGTCATATGT | + |
Preference number: 5 (lower is better) Translates to: SGIISHSRRKVKTVSANLVENEL*GLGVIC Trigger: ACATATGACCCCAAGACCCAAGAGTTCATTCTCAAC...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | CATTTCTCTTTACTTATAGAGAGGGAAAGGCCAGCCCATCATTTGCTCTATAGCGTTGAGAATGAACTCTaGGGTCTTGGGGTCATATGT | + |
Preference number: 5 (lower is better) Translates to: HFSLLIERERPAHHLLYSVENEL*GLGVIC Trigger: ACATATGACCCCAAGACCCAAGAGTTCATTCTCAAC...GCTATAGAGCAAATGATGGGCTGGCCTTTCCCTCTCTATAAGTAAAGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGTCTTCGATACCAGCATaGGCTGTCCAGGTAGTAAAA | + |
Preference number: 5 (lower is better) Translates to: SGIISHSRRKVKTVSANLSSIPA*AVQVVK Trigger: TTTTACTACCTGGACAGCCAATGCTGGTATCGAAGA...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | ACAAGTCTGAAGACGATTTCACAAGGATTAGTGAATCAAGGAGAGATTCGGCCTGTCCCATATGTCAGCTaGTTACTCAGAGGTTTTACA | + |
Preference number: 5 (lower is better) Translates to: TSLKTISQGLVNQGEIRPVPYVS*LLRGFT Trigger: TGTAAAACCTCTGAGTAACAAGCTGACATATGGGAC...AGGCCGAATCTCTCCTTGATTCACTAATCCTTGTGAAATCGTCTTCAGACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS-3UTR CAA 90 bp | TCAGGGATTATCAGTCATTCCAGGAGAAAGGTTAAGACTGTGTCAGCAAATCTGGTCCCATATGTCAGCTaGTTACTCAGAGGTTTTACA | + |
Preference number: 5 (lower is better) Translates to: SGIISHSRRKVKTVSANLVPYVS*LLRGFT Trigger: TGTAAAACCTCTGAGTAACAAGCTGACATATGGGAC...CAGATTTGCTGACACAGTCTTAACCTTTCTCCTGGAATGACTGATAATCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | TCCACCAGAGTTGGCCAGACTGCCACCTGCTGCGGCTaGATACGCTGGCTCGGCAGGTCATTCAAGTACGAC | + |
Preference number: 6 (lower is better) Translates to: STRVGQTATCCG*IRWLGRSFKYD Trigger: GTCGTACTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | CTTCGGTGGCCTGGTGAAGCAAGGTGGGCAGGAACATaGCCAAGTGAAGGTCCAAAGGCTCAGGATGCCCTC | + |
Preference number: 6 (lower is better) Translates to: LRWPGEARWAGT*PSEGPKAQDAL Trigger: GAGGGCATCCTGAGCCTTTGGACCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTCACCAGGCCACCGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000148601.2 |
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CDS GCA 72 bp | CTGTTAATGTCCACCAGAGTTGGCCAGACTGCCACCTaGTGCGGCTGGATACGCTGGCTCGGCAGGTCATTC | + |
Preference number: 6 (lower is better) Translates to: LLMSTRVGQTAT*CGWIRWLGRSF Trigger: GAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAACAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | TGCACAGAGCGTGGCCCATCTCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTTGGGACGGGTGCATCC | + |
Preference number: 6 (lower is better) Translates to: CTERGPSPSGRR*QLSGVLGTGAS Trigger: GGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAGATGGGCCACGCTCTGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148601.2 |
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CDS CCA 72 bp | GTTGGCCAGACTGCCACCTGCTGCGGCTGGATACGCTaGCTCGGCAGGTCATTCAAGTACGACACCATACCA | + |
Preference number: 6 (lower is better) Translates to: VGQTATCCGWIR*LGRSFKYDTIP Trigger: TGGTATGGTGTCGTACTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | TGTCAGGCTGTCCAGGCTGTTAATGTCCACCAGAGTTaGCCAGACTGCCACCTGCTGCGGCTGGATACGCTG | + |
Preference number: 6 (lower is better) Translates to: CQAVQAVNVHQS*PDCHLLRLDTL Trigger: CAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAACAGCCTGGACAGCCTGACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 90 bp | GTGGCCCATCTCCGTCTGGGCGTAGGTGCCAATTATCTGGAGTTCTaGGGACGGGTGCATCCATTTCTCCTGCTGAGCAGTGGTGCCCTG | + |
Preference number: 6 (lower is better) Translates to: VAHLRLGVGANYLEF*GRVHPFLLLSSGAL Trigger: CAGGGCACCACTGCTCAGCAGGAGAAATGGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAGATGGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | TTAATGTCCACCAGAGTTGGCCAGACTGCCACCTGCTaGGGCTGGATACGCTGGCTCGGCAGGTCATTCAAG | + |
Preference number: 6 (lower is better) Translates to: LMSTRVGQTATC*GWIRWLGRSFK Trigger: CTTGAATGACCTGCCGAGCCAGCGTATCCAGCCGCAGCAGGTGGCAGTCTGGCCAACTCTGGTGGACATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | GATGAGTTCCGTGGCCCATCTCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTTCTTGGGACGGGTGCATCC | + |
Preference number: 6 (lower is better) Translates to: DEFRGPSPSGRR*QLSGVLGTGAS Trigger: GGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAGATGGGCCACGGAACTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072948.11 |
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CDS CAA 72 bp | GGACTACCATCCAAGATGTGCGTGATTAACTCTGGATaGAAGGTGGCGGCGGCCCGCTCCTTGCGCAGATCG | + |
Preference number: 6 (lower is better) Translates to: GLPSKMCVINSG*KVAAARSLRRS Trigger: CGATCTGCGCAAGGAGCGGGCCGCCGCCACCTTCAATCCAGAGTTAATCACGCACATCTTGGATGGTAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS TCA 72 bp | CATCCACCAAAGCCACAGCGTTGGGGCGAGTCACTGTaGGCAGCTCCAGGATCCGACTGTTTACCTGTGACA | + |
Preference number: 6 (lower is better) Translates to: HPPKPQRWGESL*AAPGSDCLPVT Trigger: TGTCACAGGTAAACAGTCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | GACCTTAACGGTCACGTAGTGGCAGTGCGCCTCACTTaGGCGAACAAGGTCGACAGAAGTCAAGTTCCACGC | + |
Preference number: 6 (lower is better) Translates to: DLNGHVVAVRLT*ANKVDRSQVPR Trigger: GCGTGGAACTTGACTTCTGTCGACCTTGTTCGCGCAAGTGAGGCGCACTGCCACTACGTGACCGTTAAGGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | ACCAAACTTGGGGCCGATATCCCCAACAGTGATGCCTaGCAGAGGCTTGTGGGTCCCAATCTCACGGATAGG | + |
Preference number: 6 (lower is better) Translates to: TKLGADIPNSDA*QRLVGPNLTDR Trigger: CCTATCCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGGGATATCGGCCCCAAGTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 72 bp | GGGCCGATATCCCCAACAGTGATGCCTGGCAGAGGCTaGTGGGTCCCAATCTCACGGATAGGGACAACAAAG | + |
Preference number: 6 (lower is better) Translates to: GPISPTVMPGRG*WVPISRIGTTK Trigger: CTTTGTTGTCCCTATCCGTGAGATTGGGACCCACAAGCCTCTGCCAGGCATCACTGTTGGGGATATCGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | ACTGGCGCCTCACAGCACTGTATCGAATGGCAATGGTaGATGCCTTGGACAGACTCTGAGCTGCACTTCCCA | + |
Preference number: 6 (lower is better) Translates to: TGASQHCIEWQW*MPWTDSELHFP Trigger: TGGGAAGTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATTCGATACAGTGCTGTGAGGCGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | CAGACTGGCGCCTCACAGCACTGTATCGAATGGCAATaGTGCATGCCTTGGACAGACTCTGAGCTGCACTTC | + |
Preference number: 6 (lower is better) Translates to: QTGASQHCIEWQ*CMPWTDSELHF Trigger: GAAGTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATTCGATACAGTGCTGTGAGGCGCCAGTCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 72 bp | TCCTTAAAGTCAAAGGCATCCACCAAAGCCACAGCGTaGGGGCGAGTCACTGTGAGCAGCTCCAGGATCCGA | + |
Preference number: 6 (lower is better) Translates to: SLKSKASTKATA*GRVTVSSSRIR Trigger: TCGGATCCTGGAGCTGCTCACAGTGACTCGCCCCAACGCTGTGGCTTTGGTGGATGCCTTTGACTTTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 72 bp | CTCCGTCTGGGCGTAGGTGCCAATTATCTGGAGTTCTaGGGACGGGTGCATCCATTTCTCCTGCTGAGCAGT | + |
Preference number: 6 (lower is better) Translates to: LRLGVGANYLEF*GRVHPFLLLSS Trigger: ACTGCTCAGCAGGAGAAATGGATGCACCCGTCCCAAGAACTCCAGATAATTGGCACCTACGCCCAGACGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS TCA 72 bp | GTGGCCAGGAGCGGGAAGAGTTTATACTGCTGCGTCTaGAAATCCAAAATCTGGGGCTCTGGCTCGCTTCTC | + |
Preference number: 6 (lower is better) Translates to: VARSGKSLYCCV*KSKIWGSGSLL Trigger: GAGAAGCGAGCCAGAGCCCCAGATTTTGGATTTTCAGACGCAGCAGTATAAACTCTTCCCGCTCCTGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | GAAGGTGCAGGCCGGGGTAAACGTGACGTAAATATTTaGAATCCCACTGCTGTGAGAATAGCCGTGCCCACC | + |
Preference number: 6 (lower is better) Translates to: EGAGRGKRDVNI*NPTAVRIAVPT Trigger: GGTGGGCACGGCTATTCTCACAGCAGTGGGATTCCAAATATTTACGTCACGTTTACCCCGGCCTGCACCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 72 bp | CCACCGCAAGCCATCCGACATTCTTCGATACCAGCATaGGCTGTCCAGGTAGTAAAAGCCTTCAGCCCAGCT | + |
Preference number: 6 (lower is better) Translates to: PPQAIRHSSIPA*AVQVVKAFSPA Trigger: AGCTGGGCTGAAGGCTTTTACTACCTGGACAGCCAATGCTGGTATCGAAGAATGTCGGATGGCTTGCGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 90 bp | CCCAGCTGTGAGGGCATGAAGCTCAGGCAGCTCACTCAGGTCGCCTaGGCCAATGCTCTCATTAATCCGCATGTAGGTCTCCTTTATGTA | + |
Preference number: 6 (lower is better) Translates to: PSCEGMKLRQLTQVA*ANALINPHVGLLYV Trigger: TACATAAAGGAGACCTACATGCGGATTAATGAGAGCATTGGCCAAGGCGACCTGAGTGAGCTGCCTGAGCTTCATGCCCTCACAGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 90 bp | CCCACGAGGAAGGACCTTACGAAAACCATGGTCCCATATGTCAGCTaGTTACTCAGAGGTTTTACATACGTGCCGTCAGGCTTCACCTGG | + |
Preference number: 6 (lower is better) Translates to: PTRKDLTKTMVPYVS*LLRGFTYVPSGFTW Trigger: CCAGGTGAAGCCTGACGGCACGTATGTAAAACCTCTGAGTAACAAGCTGACATATGGGACCATGGTTTTCGTAAGGTCCTTCCTCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS TCA 72 bp | CACAGGTTCCTCAGCACGGCTTGCACGGCTCTGTCTTaGATCTTGGGGAGTTTATCTGCAAAGACCTTAACG | + |
Preference number: 6 (lower is better) Translates to: HRFLSTACTALS*ILGSLSAKTLT Trigger: CGTTAAGGTCTTTGCAGATAAACTCCCCAAGATTCAAGACAGAGCCGTGCAAGCCGTGCTGAGGAACCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | AATGGCAATGGTGCATGCCTTGGACAGACTCTGAGCTaGACTTCCCACGAGGAAGGACCTTACGAAAACCAT | + |
Preference number: 6 (lower is better) Translates to: NGNGACLGQTLS*TSHEEGPYENH Trigger: ATGGTTTTCGTAAGGTCCTTCCTCGTGGGAAGTGCAGCTCAGAGTCTGTCCAAGGCATGCACCATTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | CAAGGTCGACAGAAGTCAAGTTCCACGCCACTTCCTTaGTCTTCCTGTGACTCACTTGGGCCTGAAGGTTTT | + |
Preference number: 6 (lower is better) Translates to: QGRQKSSSTPLP*SSCDSLGPEGF Trigger: AAAACCTTCAGGCCCAAGTGAGTCACAGGAAGAGCAAGGAAGTGGCGTGGAACTTGACTTCTGTCGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 90 bp | CCACTTCCTTGCTCTTCCTGTGACTCACTTGGGCCTGAAGGTTTTTaGCAGCAATTTCTACCAATCTGGCTGCACGTAGCTTGTAGGCTT | + |
Preference number: 6 (lower is better) Translates to: PLPCSSCDSLGPEGF*QQFLPIWLHVACRL Trigger: AAGCCTACAAGCTACGTGCAGCCAGATTGGTAGAAATTGCTGCAAAAAACCTTCAGGCCCAAGTGAGTCACAGGAAGAGCAAGGAAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 72 bp | TGCTCTTCCTGTGACTCACTTGGGCCTGAAGGTTTTTaGCAGCAATTTCTACCAATCTGGCTGCACGTAGCT | + |
Preference number: 6 (lower is better) Translates to: CSSCDSLGPEGF*QQFLPIWLHVA Trigger: AGCTACGTGCAGCCAGATTGGTAGAAATTGCTGCAAAAAACCTTCAGGCCCAAGTGAGTCACAGGAAGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CAA 90 bp | CACCTCGTAACGCTGGCTTCGAGTGAGGAAGTTATAGTCCTCATGTaGGAAGTCTGGATCGTTCAGAATCAAGTTCTCGATTTCTCGACG | + |
Preference number: 6 (lower is better) Translates to: HLVTLASSEEVIVLM*EVWIVQNQVLDFST Trigger: CGTCGAGAAATCGAGAACTTGATTCTGAACGATCCAGACTTCCAACATGAGGACTATAACTTCCTCACTCGAAGCCAGCGTTACGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS CCA 72 bp | ATTCGTGGACCTCTGTCTTGTTCAGTGGGGACTTCTTaGCCCACTCAAACAAGTTTTCATACACATTGCCAT | + |
Preference number: 6 (lower is better) Translates to: IRGPLSCSVGTS*PTQTSFHTHCH Trigger: ATGGCAATGTGTATGAAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS GCA 72 bp | CATATGTCAGCTTGTTACTCAGAGGTTTTACATACGTaGCGTCAGGCTTCACCTGGGCATATTTCATCAACA | + |
Preference number: 6 (lower is better) Translates to: HMSACYSEVLHT*RQASPGHISST Trigger: TGTTGATGAAATATGCCCAGGTGAAGCCTGACGGCACGTATGTAAAACCTCTGAGTAACAAGCTGACATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |
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CDS CCA 72 bp | TCGAGTGAGGAAGTTATAGTCCTCATGTTGGAAGTCTaGATCGTTCAGAATCAAGTTCTCGATTTCTCGACG | + |
Preference number: 6 (lower is better) Translates to: SSEEVIVLMLEV*IVQNQVLDFST Trigger: CGTCGAGAAATCGAGAACTTGATTCTGAACGATCCAGACTTCCAACATGAGGACTATAACTTCCTCACTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 |
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CDS CCA 72 bp | CTTGTAGTAAGATTCGTGGACCTCTGTCTTGTTCAGTaGGGACTTCTTGGCCCACTCAAACAAGTTTTCATA | + |
Preference number: 6 (lower is better) Translates to: LVVRFVDLCLVQ*GLLGPLKQVFI Trigger: TATGAAAACTTGTTTGAGTGGGCCAAGAAGTCCCCACTGAACAAGACAGAGGTCCACGAATCTTACTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066587.12 ENSMUST00000072948.11 ENSMUST00000148601.2 |