Pregenerated sensors for ACOT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017307Ensembl transcript IDs: ENSMUST00000017451.7, ENSMUST00000103094.11, ENSMUST00000134611.4
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATaGACCAGCCCTCGAGAGCCACCAGCCCAGGGGCTCTCACACTCG | + |
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Preference number: 1 (lower is better) Translates to: AQVTARTPSRRHSRP*TSPREPPAQGLSHS Trigger: CGAGTGTGAGAGCCCCTGGGCTGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR CCA 90 bp | CGGGCACGCACCCAGAACATCTGTTTGGGCTCCAGTGCCTGCAGCTaGGTCAGGGTGGGTGGGTTCACCACCTTGATCTCAATAGGTACC | + |
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Preference number: 1 (lower is better) Translates to: RARTQNICLGSSACS*VRVGGFTTLISIGT Trigger: GGTACCTATTGAGATCAAGGTGGTGAACCCACCCACCCTGACCCAGCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGGTGCGTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 90 bp | GTGGTCGGCTCGGAATGGGGCATGAAACCACATGGAGTGATCCAGTaGCGCCATGAAGTTCACCTTATACTTGGACTGGTGGGGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VVGSEWGMKPHGVIQ*RHEVHLILGLVGQQ Trigger: CTGCTGCCCCACCAGTCCAAGTATAAGGTGAACTTCATGGCGTCACTGGATCACTCCATGTGGTTTCATGCCCCATTCCGAGCCGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 90 bp | GGAAGGCGTAGTCAGAGATATAAGCAGCCACACAGCAATGCATCTTaGTGTCACCTTCCCCAATGTAGCCCCGGGCACGCACCCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: GRRSQRYKQPHSNAS*CHLPQCSPGHAPRT Trigger: TGTTCTGGGTGCGTGCCCGGGGCTACATTGGGGAAGGTGACATCAAGATGCATTGCTGTGTGGCTGCTTATATCTCTGACTACGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 90 bp | ATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTaGCTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISLLYVRGRKPSSQL*LLPQKWQCKVLLAP Trigger: TGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCTCCAGTGCCTGCAGCTaGGTCAGGGTGGGTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: AQVTARTPSRRHSRPCTSSSACS*VRVGGF Trigger: GAACCCACCCACCCTGACCCAGCTGCAGGCACTGGA...GCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR GCA 90 bp | CCACCAGCCCAGGGGCTCTCACACTCGTACAGCATCCAGTGGTCGGCTCGGAATTTGGGCTCCAGTGCCTaGAGCTGGGTCAGGGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PPAQGLSHSYSIQWSARNLGSSA*SWVRVG Trigger: ACCCACCCTGACCCAGCTGCAGGCACTGGAGCCCAA...ATTCCGAGCCGACCACTGGATGCTGTACGAGTGTGAGAGCCCCTGGGCTGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR CAA 90 bp | GGCTCCAGTGCCTGCAGCTGGGTCAGGGTGGGTGGGTTCACCACCTaGATCTCAATAGGTACCTCCTGGGCAGCAACTCGGTTCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GSSACSWVRVGGFTT*ISIGTSWAATRFSP Trigger: GGGGCTGAACCGAGTTGCTGCCCAGGAGGTACCTATTGAGATCAAGGTGGTGAACCCACCCACCCTGACCCAGCTGCAGGCACTGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGGGGCATGAAACCACATaGAGTGATCCAGTGACGCCA | + |
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Preference number: 2 (lower is better) Translates to: GTGHSKDPIPTPQPPMHQGHETT*SDPVTP Trigger: TGGCGTCACTGGATCACTCCATGTGGTTTCATGCCC...CTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR TCA 90 bp | GCACAGGTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCACTCGATACTTCTTGTaGAGGTTAGGGTCCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: AQVTARTPSRRHSRPCTSTRYFL*RLGSLK Trigger: CTTAAGGGACCCTAACCTTCACAAGAAGTATCGAGT...GCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGACCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATGCACCAGCCCTCGACTCCTGCCTCAGAAATaGCAGTGCAAAGTCCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: VTARTPSRRHSRPCTSPRLLPQK*QCKVLL Trigger: TAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAG...TCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGCCCAGCTCTCAACTGTaGCTCCTGCCTCAGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: SPRPSQASFTIAYSLTPEPSSQL*LLPQKW Trigger: CCATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGG...CTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| 3UTR CCA 72 bp | ACCCAGAACATCTGTTTGGGCTCCAGTGCCTGCAGCTaGGTCAGGGTGGGTGGGTTCACCACCTTGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: TQNICLGSSACS*VRVGGFTTLIS Trigger: TGAGATCAAGGTGGTGAACCCACCCACCCTGACCCAGCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGACCCAGAACATCTGTTaGGGCTCCAGTGCCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SPRPSQASFTIAYSLTPETQNIC*GSSACS Trigger: GCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGGT...CTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR CCA 72 bp | GGTGGGTTCACCACCTTGATCTCAATAGGTACCTCCTaGGCAGCAACTCGGTTCAGCCCCACTCGATACTTC | + |
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Preference number: 3 (lower is better) Translates to: GGFTTLISIGTS*AATRFSPTRYF Trigger: GAAGTATCGAGTGGGGCTGAACCGAGTTGCTGCCCAGGAGGTACCTATTGAGATCAAGGTGGTGAACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 72 bp | AGTCAGAGATATAAGCAGCCACACAGCAATGCATCTTaGTGTCACCTTCCCCAATGTAGCCCCGGGCACGCA | + |
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Preference number: 3 (lower is better) Translates to: SQRYKQPHSNAS*CHLPQCSPGHA Trigger: TGCGTGCCCGGGGCTACATTGGGGAAGGTGACATCAAGATGCATTGCTGTGTGGCTGCTTATATCTCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 72 bp | GGGCATGAAACCACATGGAGTGATCCAGTGACGCCATaGAGTTCACCTTATACTTGGACTGGTGGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GHETTWSDPVTP*SSPYTWTGGAA Trigger: TGCTGCCCCACCAGTCCAAGTATAAGGTGAACTTCATGGCGTCACTGGATCACTCCATGTGGTTTCATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR GCA 72 bp | GAAGTTCACCTTATACTTGGACTGGTGGGGCAGCAGTaGTGTACCCAGGAAGGCGTAGTCAGAGATATAAGC | + |
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Preference number: 3 (lower is better) Translates to: EVHLILGLVGQQ*CTQEGVVRDIS Trigger: GCTTATATCTCTGACTACGCCTTCCTGGGTACAGCACTGCTGCCCCACCAGTCCAAGTATAAGGTGAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| 3UTR TCA 72 bp | TTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTaGCTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LYVRGRKPSSQL*LLPQKWQCKVL Trigger: AAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| 3UTR TCA 72 bp | TCGGAATGGGGCATGAAACCACATGGAGTGATCCAGTaGCGCCATGAAGTTCACCTTATACTTGGACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SEWGMKPHGVIQ*RHEVHLILGLV Trigger: CACCAGTCCAAGTATAAGGTGAACTTCATGGCGTCACTGGATCACTCCATGTGGTTTCATGCCCCATTCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CCCAGGGGCTCTCACACTCGTACAGCATCCAGTGGTCGGCTCGGAATGGGGCATGGGCTGGGCTGCATCTaGTGGAAGGAGGCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRGSHTRTASSGRLGMGHGLGCI*WKEAWQ Trigger: CTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAGCCC...ATGCCCCATTCCGAGCCGACCACTGGATGCTGTACGAGTGTGAGAGCCCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCGGGCTGGGCTGCATCTaGTGGAAGGAGGCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSGLGCI*WKEAWQ Trigger: CTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAGCCC...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCGGCATGGAGAACTGGTaGTGCAGCGGGCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSGMENW*CSGLGC Trigger: GCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCC...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| 3UTR CAA 72 bp | GCCTGCAGCTGGGTCAGGGTGGGTGGGTTCACCACCTaGATCTCAATAGGTACCTCCTGGGCAGCAACTCGG | + |
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Preference number: 4 (lower is better) Translates to: ACSWVRVGGFTT*ISIGTSWAATR Trigger: CCGAGTTGCTGCCCAGGAGGTACCTATTGAGATCAAGGTGGTGAACCCACCCACCCTGACCCAGCTGCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTCGGTCGGCGTCGCCATaGGCATCTCCCAGACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRPSQASFTIAYSLTPEARSASP*ASPRPS Trigger: AGAGGGTCTGGGAGATGCTCATGGCGACGCCGACCG...AGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTTGCAGCGGGCTGGGCTaGATCTGCTGGAAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRPSQASFTIAYSLTPEACSGLG*ICWKEA Trigger: GGCCTCCTTCCAGCAGATGCAGCCCAGCCCGCTGCA...AGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTGGCATGGAGAACTGGTaGTGCAGCGGGCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRPSQASFTIAYSLTPEAGMENW*CSGLGC Trigger: GCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCC...AGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCTTGGGCTCCAGTGCCTaGAGCTGGGTCAGGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSLGSSA*SWVRVG Trigger: ACCCACCCTGACCCAGCTGCAGGCACTGGAGCCCAA...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | CTTGATCTCAATAGGTACCTCCTGGGCAGCAACTCGGTTCAGCCCCACTCGATATGCAGCGGGCTGGGCTaGATCTGCTGGAAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LDLNRYLLGSNSVQPHSICSGLG*ICWKEA Trigger: GGCCTCCTTCCAGCAGATGCAGCCCAGCCCGCTGCA...TATCGAGTGGGGCTGAACCGAGTTGCTGCCCAGGAGGTACCTATTGAGATCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCCTGGGCTGCATCTGCTaGAAGGAGGCCTGGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSLGCIC*KEAWQM Trigger: CATCTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAG...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | ATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACGGTGCTGCAGCGGGCTaGGCTGCATCTGCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IAYSLTPEASIGSHPPGHGAAAG*AASAGR Trigger: CCTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACC...GTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | TTCCCCAATGTAGCCCCGGGCACGCACCCAGAACATCTGTTTGGGCTCCAGTGCTACGTGGTACAGCACTaGCACTTTCGGGTCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FPNVAPGTHPEHLFGLQCYVVQH*HFRVPC Trigger: ACAGGGGACCCGAAAGTGCCAGTGCTGTACCACGTA...GCACTGGAGCCCAAACAGATGTTCTGGGTGCGTGCCCGGGGCTACATTGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
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| CDS-3UTR TCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGCGGTCGGCGTCGCCATaGGCATCTCCCAGACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMRSASP*ASPRPS Trigger: AGAGGGTCTGGGAGATGCTCATGGCGACGCCGACCG...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGGGCATGGAGAACTGGTaGTGCAGCGGGCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMGMENW*CSGLGC Trigger: GCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCC...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCCTTCACTCACAGACTTaGCTGCAGCCACCAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSLHSQT*LQPPGP Trigger: AGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGTGAAG...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGGGTGCTGCAGCGGGCTaGGCTGCATCTGCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMGAAAG*AASAGR Trigger: CCTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACC...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | CCTTTTAGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACAGGGGCACGGAGGGCATaGAGAACTGGTGCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PFSPRPSQASFTIAYSLTGARRA*RTGAAA Trigger: CGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCC...TGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCTAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCGGGGCACGGAGGGCATaGAGAACTGGTGCTGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPGARRA*RTGAAA Trigger: CGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCC...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCACTCACAGACTTGGCTaGAGCCACCAGGGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPTHRLG*SHQGLA Trigger: GGCCAGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGT...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGAAGATGGCCTTGCCATaGTGCACAGCCTTCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: SPRPSQASFTIAYSLTPEKMALP*CTAFTA Trigger: CGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTT...CTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTAAGATGGCCTTGCCATaGTGCACAGCCTTCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: PRPSQASFTIAYSLTPEAKMALP*CTAFTA Trigger: CGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTT...AGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAGGGCTGGGCTGCATCTaGTGGAAGGAGGCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASEGLGCI*WKEAWQ Trigger: CTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAGCCC...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAATGCAGCGGGCTGGGCTaGATCTGCTGGAAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASECSGLG*ICWKEA Trigger: GGCCTCCTTCCAGCAGATGCAGCCCAGCCCGCTGCA...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCTTGGGCTCCAGTGCCTaGAGCTGGGTCAGGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPLGSSA*SWVRVG Trigger: ACCCACCCTGACCCAGCTGCAGGCACTGGAGCCCAA...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | AGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGACGCCACAGCCGCCCATaGACCAGCCCTCGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQASFTIAYSLTPEASIGRHSRP*TSPREP Trigger: TGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCG...TCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017451.7 |
||
| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAGAGGGCATGGAGAACTaGTGCTGCAGCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASEEGMEN*CCSGLG Trigger: GCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTC...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGTCCAGTGCCTGCAGCTaGGTCAGGGTGGGTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMSSACS*VRVGGF Trigger: GAACCCACCCACCCTGACCCAGCTGCAGGCACTGGA...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR TCA 90 bp | AGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGACGGTCGGCGTCGCCATaGGCATCTCCCAGACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQASFTIAYSLTPEASIGRSASP*ASPRPS Trigger: AGAGGGTCTGGGAGATGCTCATGGCGACGCCGACCG...TCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
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| CDS-3UTR GCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAACTCACAGACTTGGCTaGAGCCACCAGGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASETHRLG*SHQGLA Trigger: GGCCAGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGT...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCCTGTTTGGGCTCCAGTaGCTGCAGCTGGGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPLFGLQ*LQLGQG Trigger: ACCCTGACCCAGCTGCAGGCACTGGAGCCCAAACAG...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGGCCGAGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGTGCTGGAAGGAGGCCTaGCAGATGAAGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRPSQASFTIAYSLTPECWKEA*QMKMAL Trigger: CAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCA...CTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCTCGGCCTGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
||
| CDS-3UTR CCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGCTGGGCTGCATCTGCTaGAAGGAGGCCTGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMLGCIC*KEAWQM Trigger: CATCTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAG...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCATCTTTCACTATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGAGAGGGCATGGAGAACTaGTGCTGCAGCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQASFTIAYSLTPEASIGEGMEN*CCSGLG Trigger: GCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTC...TCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTATAGTGAAAGATGCCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000134611.4 |
||
| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAATCCAGTGCCTGCAGCTaGGTCAGGGTGGGTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASESSACS*VRVGGF Trigger: GAACCCACCCACCCTGACCCAGCTGCAGGCACTGGA...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGAAGATGGCCTTGCCATaGTGCACAGCCTTCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMKMALP*CTAFTA Trigger: CGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTT...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
||
| CDS-3UTR GCA 90 bp | AATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTCGCCACAGCCGCCCATaGACCAGCCCTCGAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLFIVCKRQEAQLSTVTPRHSRP*TSPREP Trigger: TGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCG...AGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
||
| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAATACGTGGTACAGCACTaGCACTTTCGGGTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASEYVVQH*HFRVPC Trigger: GCAGGGGACCCGAAAGTGCCAGTGCTGTACCACGTA...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTGGTGCTGCAGCGGGCTaGGCTGCATCTGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTGAAAG*AASAGR Trigger: CCTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACC...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | AATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGAGGGCATGGAGAACTaGTGCTGCAGCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLFIVCKRQEAQLSTVTPEGMEN*CCSGLG Trigger: GCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTC...AGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
||
| CDS-3UTR CCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTGGGGCACGGAGGGCATaGAGAACTGGTGCTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTGARRA*RTGAAA Trigger: CGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCC...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCGTGGTCGGCTCGGAATaGGGCATGAAACCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPVVGSE*GMKPHG Trigger: TCCATGTGGTTTCATGCCCCATTCCGAGCCGACCAC...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103094.11 |
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| CDS-3UTR TCA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCACTCGATACTTCTTGTaGAGGTTAGGGTCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTPASEMAVQSPFSPRPSTRYFL*RLGSLK Trigger: CTTAAGGGACCCTAACCTTCACAAGAAGTATCGAGT...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAATGCTGGAAGGAGGCCTaGCAGATGAAGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASECWKEA*QMKMAL Trigger: CAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCA...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAACCCAGAACATCTGTTTaGGCTCCAGTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASEPRTSV*APVPAA Trigger: AGCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGG...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCTTATACTTGGACTGGTaGGGCAGCAGTGCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPLYLDW*GSSAVP Trigger: GGGTACAGCACTGCTGCCCCACCAGTCCAAGTATAA...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGTTATACTTGGACTGGTaGGGCAGCAGTGCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMLYLDW*GSSAVP Trigger: GGGTACAGCACTGCTGCCCCACCAGTCCAAGTATAA...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR GCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCTGTTTGGGCTCCAGTaGCTGCAGCTGGGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTLFGLQ*LQLGQG Trigger: ACCCTGACCCAGCTGCAGGCACTGGAGCCCAAACAG...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAATGCAGGGAGTGGACATaGACGTCTTCACTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASECREWT*TSSLTD Trigger: GTCTGTGAGTGAAGACGTCCATGTCCACTCCCTGCA...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTCTGGGCTGCATCTGCTaGAAGGAGGCCTGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NLFIVCKRQEAQLSTVTPLGCIC*KEAWQM Trigger: CATCTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAG...AGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAGGGCATGAAACCACATaGAGTGATCCAGTGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVCKRQEAQLSTVTPASEGHETT*SDPVTP Trigger: TGGCGTCACTGGATCACTCCATGTGGTTTCATGCCC...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCGGATCACACCCTCCTaGGCACAGGTCACAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTRITPS*AQVTAR Trigger: CCTTGCTGTGACCTGTGCCCAGGAGGGTGTGATCCG...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103094.11 |
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| CDS-3UTR TCA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCCACAGCAATGCATCTTaGTGTCACCTTCCCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTVTPASEMAVQSPFSPHSNAS*CHLPQC Trigger: ACATTGGGGAAGGTGACATCAAGATGCATTGCTGTG...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTCTTCACTCACAGACTTaGCTGCAGCCACCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFIVCKRQEAQLSTVTPLHSQT*LQPPGP Trigger: AGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGTGAAG...AGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTTACGTGGTACAGCACTaGCACTTTCGGGTCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTYVVQH*HFRVPC Trigger: GCAGGGGACCCGAAAGTGCCAGTGCTGTACCACGTA...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR TCA 90 bp | GTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAATGACTCGATACTTCTTGTaGAGGTTAGGGTCCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCKRQEAQLSTVTPASEMTRYFL*RLGSLK Trigger: CTTAAGGGACCCTAACCTTCACAAGAAGTATCGAGT...CATTTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CCA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTTGCTGGAAGGAGGCCTaGCAGATGAAGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTCWKEA*QMKMAL Trigger: CAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCA...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CCA 90 bp | AATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTCCCAGAACATCTGTTTaGGCTCCAGTGCCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFIVCKRQEAQLSTVTPPRTSV*APVPAA Trigger: AGCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGG...AGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS CCA 90 bp | GGGCCTCGTGATCCAGCAGGTCTTCTGGCGGGGGCACGGAGGGCATaGAGAACTGGTGCTGCAGCGGGCTGGGCTGCATCTGCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRDPAGLLAGARRA*RTGAAAGWAASAGR Trigger: CCTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCCCGCCAGAAGACCTGCTGGATCACGAGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS GCA 90 bp | TGCATCTGCTGGAAGGAGGCCTGGCAGATGAAGATGGCCTTGCCATaGTGCACAGCCTTCACGGCGCGCACTGAGAAGCTGGCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CICWKEAWQMKMALP*CTAFTARTEKLAPV Trigger: GACAGGAGCCAGCTTCTCAGTGCGCGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCAGATGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS GCA 90 bp | GCAGTGCAGGGAGTGGACATGGACGTCTTCACTCACAGACTTGGCTaGAGCCACCAGGGCCTGGCCCATAATTTGACCCCCAAAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVQGVDMDVFTHRLG*SHQGLAHNLTPKEP Trigger: CGGCTCTTTGGGGGTCAAATTATGGGCCAGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGTGAAGACGTCCATGTCCACTCCCTGCACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS-3UTR CAA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCTCTAGCGGCTCGAGGTaGAGCACGCTCGTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTVTPASEMAVQSPFSPSSGSR*STLVTS Trigger: GCTGGTCACGAGCGTGCTCAACCTCGAGCCGCTAGA...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGGTCAGGGTGGGTGGGTTCACCACCTTGATCTCAATAGGTACCTCCTGCAGATGAAGATGGCCTaGCCATGCTGCACAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLGQGGWVHHLDLNRYLLQMKMA*PCCTAF Trigger: GAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTG...CAGGAGGTACCTATTGAGATCAAGGTGGTGAACCCACCCACCCTGACCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGTACCCAGGAAGGCGTAGTCAGAGATATAAGCAGCCACACAGCAATGCATTCTAGCGGCTCGAGGTaGAGCACGCTCGTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCTQEGVVRDISSHTAMHSSGSR*STLVTS Trigger: GCTGGTCACGAGCGTGCTCAACCTCGAGCCGCTAGA...ATGCATTGCTGTGTGGCTGCTTATATCTCTGACTACGCCTTCCTGGGTACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134611.4 |
||
| CDS-3UTR CAA 90 bp | ATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACACCCAGAACATCTGTTaGGGCTCCAGTGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IAYSLTPEASIGSHPPGHTQNIC*GSSACS Trigger: GCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGGT...GTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017451.7 |
||
| CDS-3UTR CAA 90 bp | CTCTCAACTGTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCCAGATGAAGATGGCCTaGCCATGCTGCACAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSTVTPASEMAVQSPFSPQMKMA*PCCTAF Trigger: GAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTG...GGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCACAGTTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
||
| CDS-3UTR CAA 90 bp | ATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTCCTGCCTCAGAAACCCAGAACATCTGTTaGGGCTCCAGTGCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IVCKRQEAQLSTVTPASETQNIC*GSSACS Trigger: GCTGCAGGCACTGGAGCCCAAACAGATGTTCTGGGT...TTCTGAGGCAGGAGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCTGCCTCAGAAATGGCAGTGCAAAGTCCTTTTAGCCCCAGGCCGAGCACACAGCAATGCATCTaGATGTCACCTTCCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VTPASEMAVQSPFSPRPSTQQCI*MSPSPM Trigger: CATTGGGGAAGGTGACATCAAGATGCATTGCTGTGT...GCTCGGCCTGGGGCTAAAAGGACTTTGCACTGCCATTTCTGAGGCAGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
||
| CDS-3UTR CAA 90 bp | AGCAATCTCTTTATTGTATGTAAGAGGCAGGAAGCCCAGCTCTCAACTGTGACTTCTAGCGGCTCGAGGTaGAGCACGCTCGTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: SNLFIVCKRQEAQLSTVTSSGSR*STLVTS Trigger: GCTGGTCACGAGCGTGCTCAACCTCGAGCCGCTAGA...AGTCACAGTTGAGAGCTGGGCTTCCTGCCTCTTACATACAATAAAGAGATTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS-3UTR CAA 90 bp | ATAGCTTACTCTCTGACACCTGAGGCTTCAATCGGATCACACCCTCCTGGGCACACACAGCAATGCATCTaGATGTCACCTTCCCCAATG | + |
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Preference number: 5 (lower is better) Translates to: IAYSLTPEASIGSHPPGHTQQCI*MSPSPM Trigger: CATTGGGGAAGGTGACATCAAGATGCATTGCTGTGT...GTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAGTAAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017451.7 |
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| CDS GCA 72 bp | TCTTCTGGCGGGGGCACGGAGGGCATGGAGAACTGGTaGTGCAGCGGGCTGGGCTGCATCTGCTGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSGGGTEGMENW*CSGLGCICWKE Trigger: CTCCTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCCCGCCAGAAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS CCA 72 bp | AGGTCTTCTGGCGGGGGCACGGAGGGCATGGAGAACTaGTGCTGCAGCGGGCTGGGCTGCATCTGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSSGGGTEGMEN*CCSGLGCICWK Trigger: CTTCCAGCAGATGCAGCCCAGCCCGCTGCAGCACCAGTTCTCCATGCCCTCCGTGCCCCCGCCAGAAGACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS CCA 72 bp | CTGGTCAATGAGGGCCTCGTGATCCAGCAGGTCTTCTaGCGGGGGCACGGAGGGCATGGAGAACTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LVNEGLVIQQVF*RGHGGHGELVL Trigger: CAGCACCAGTTCTCCATGCCCTCCGTGCCCCCGCCAGAAGACCTGCTGGATCACGAGGCCCTCATTGACCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS CAA 90 bp | CTGGGCTGCATCTGCTGGAAGGAGGCCTGGCAGATGAAGATGGCCTaGCCATGCTGCACAGCCTTCACGGCGCGCACTGAGAAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LGCICWKEAWQMKMA*PCCTAFTARTEKLA Trigger: AGCCAGCTTCTCAGTGCGCGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCAGATGCAGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS TCA 72 bp | GACTTGGCTGCAGCCACCAGGGCCTGGCCCATAATTTaGCCCCCAAAGAGCCGCTGGGAGGTAGGTACCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLAAATRAWPII*PPKSRWEVGTQ Trigger: CTGGGTACCTACCTCCCAGCGGCTCTTTGGGGGTCAAATTATGGGCCAGGCCCTGGTGGCTGCAGCCAAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS TCA 72 bp | GGCCTTGCCATGCTGCACAGCCTTCACGGCGCGCACTaGGAAGCTGGCTCCTGTCCGTATCCTCTCTACGTG | + |
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Preference number: 6 (lower is better) Translates to: GLAMLHSLHGAH*EAGSCPYPLYV Trigger: CACGTAGAGAGGATACGGACAGGAGCCAGCTTCTCAGTGCGCGCCGTGAAGGCTGTGCAGCATGGCAAGGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS GCA 72 bp | ACAGCAAGGACCCCATCCCGACGCCACAGCCGCCCATaGACCAGCCCTCGAGAGCCACCTTATACTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: TARTPSRRHSRP*TSPREPPYTWT Trigger: AGTCCAAGTATAAGGTGGCTCTCGAGGGCTGGTGCATGGGCGGCTGTGGCGTCGGGATGGGGTCCTTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017451.7 |
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| CDS TCA 72 bp | TTAGGGTCCCTTAAGTACTGGTCAATGAGGGCCTCGTaGTCCAGCAGGTCTTCTGGCGGGGGCACGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGSLKYWSMRAS*SSRSSGGGTEG Trigger: GCCCTCCGTGCCCCCGCCAGAAGACCTGCTGGATCACGAGGCCCTCATTGACCAGTACTTAAGGGACCCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS GCA 72 bp | TGGAAGGAGGCCTGGCAGATGAAGATGGCCTTGCCATaGTGCACAGCCTTCACGGCGCGCACTGAGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WKEAWQMKMALP*CTAFTARTEKL Trigger: CAGCTTCTCAGTGCGCGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTGCCAGGCCTCCTTCCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS CAA 72 bp | AGACTTGGCTGCAGCCACCAGGGCCTGGCCCATAATTaGACCCCCAAAGAGCCGCTGGGAGGTAGGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: RLGCSHQGLAHN*TPKEPLGGRYP Trigger: TGGGTACCTACCTCCCAGCGGCTCTTTGGGGGTCAAATTATGGGCCAGGCCCTGGTGGCTGCAGCCAAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS CAA 72 bp | ATCTGCTGGAAGGAGGCCTGGCAGATGAAGATGGCCTaGCCATGCTGCACAGCCTTCACGGCGCGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: ICWKEAWQMKMA*PCCTAFTARTE Trigger: CTCAGTGCGCGCCGTGAAGGCTGTGCAGCATGGCAAGGCCATCTTCATCTGCCAGGCCTCCTTCCAGCAGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 ENSMUST00000134611.4 |
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| CDS GCA 72 bp | GGAGTGGACATGGACGTCTTCACTCACAGACTTGGCTaGAGCCACCAGGGCCTGGCCCATAATTTGACCCCC | + |
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Preference number: 6 (lower is better) Translates to: GVDMDVFTHRLG*SHQGLAHNLTP Trigger: GGGGGTCAAATTATGGGCCAGGCCCTGGTGGCTGCAGCCAAGTCTGTGAGTGAAGACGTCCATGTCCACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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| CDS GCA 72 bp | GAGAGCCACCTTATACTTGGACTGGTGGGGCAGCAGTaGTGTACCCAGGAAGGCGTAGTCAGAGATATAAGC | + |
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Preference number: 6 (lower is better) Translates to: ESHLILGLVGQQ*CTQEGVVRDIS Trigger: GCTTATATCTCTGACTACGCCTTCCTGGGTACAGCACTGCTGCCCCACCAGTCCAAGTATAAGGTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017451.7 |
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| CDS TCA 72 bp | GCAGCAACTCGGTTCAGCCCCACTCGATACTTCTTGTaGAGGTTAGGGTCCCTTAAGTACTGGTCAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: AATRFSPTRYFL*RLGSLKYWSMR Trigger: CCTCATTGACCAGTACTTAAGGGACCCTAACCTTCACAAGAAGTATCGAGTGGGGCTGAACCGAGTTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017451.7 ENSMUST00000103094.11 |
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