Pregenerated sensors for ACOT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028937Ensembl transcript IDs: ENSMUST00000030779.10, ENSMUST00000075363.10, ENSMUST00000105652.3, ENSMUST00000167926.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTaGATACTGGGCTATTGCCACAACTGTGCTGACCCGGGACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QWKSGVWPRGQFLSD*ILGYCHNCADPGQE Trigger: CTCCTGTCCCGGGTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR GCA 90 bp | ACAGCAGCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTaGTCTGGTGTCCATGGTGGCCTTTGGGACAACACTGGGGACATA | + |
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Preference number: 1 (lower is better) Translates to: TAALLVMLASSGQSV*SGVHGGLWDNTGDI Trigger: TATGTCCCCAGTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGCTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 90 bp | CTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTaGCCAAGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGC | + |
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Preference number: 1 (lower is better) Translates to: LNTSHNTSSQWKSGV*PRGQFLSDCILGYC Trigger: GCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACCAATTTCTAAGTGACTaGATACTGGGCTATTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ASSGQSVCSGVHGGLWDNQFLSD*ILGYCH Trigger: GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTG...GTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACCAATTTCTAAGTGACTaGATACTGGGCTATTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHQFLSD*ILGYCH Trigger: GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTG...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGGGCCATAGGGAACACTaGCACTCAACACTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: FISDAGFFRPVGVLWCPWGHREH*HSTLHT Trigger: TGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCC...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGCCATAGGGAACACTaGCACTCAACACTTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: ALLVMLASSGQSVCSGVHGHREH*HSTLHT Trigger: TGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCC...ATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGACAGCAGCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCCAATTTCTAAGTGACTaGATACTGGGCTATTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PDSSFISDAGFFRPVGVLQFLSD*ILGYCH Trigger: GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTG...GAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGCTGCTGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 72 bp | AGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTaGTGTCCATGGTGGCCTTTGGGACAACACTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SDAGFFRPVGVL*CPWWPLGQHWG Trigger: TCCCCAGTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR GCA 72 bp | TCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTaGATACTGGGCTATTGCCACAACTGTGCTGACCCG | + |
|
Preference number: 3 (lower is better) Translates to: SGVWPRGQFLSD*ILGYCHNCADP Trigger: CGGGTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR GCA 72 bp | AGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTaGCACAACTGTGCTGACCCGGGACAGGAGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RGQFLSDCILGY*HNCADPGQEED Trigger: GTCTTCCTCCTGTCCCGGGTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR GCA 72 bp | GGTGCACAGGTTTTGGGGATGGGCCATAGGGAACACTaGCACTCAACACTTCACACAACACCAGCTCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: GAQVLGMGHREH*HSTLHTTPALS Trigger: ACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCCCATCCCCAAAACCTGTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 72 bp | CTGCCACTCAACACTTCACACAACACCAGCTCTCAGTaGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LPLNTSHNTSSQ*KSGVWPRGQFL Trigger: TAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACGACATAAATAAAGCTTaGGTGCACAGGTTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASSGQSVCSGVHGGLWDNDINKA*VHRFWG Trigger: TCCCCAAAACCTGTGCACCAAAGCTTTATTTATGTC...GTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCGACATAAATAAAGCTTaGGTGCACAGGTTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LVMLASSGQSVCSGVHGGDINKA*VHRFWG Trigger: TCCCCAAAACCTGTGCACCAAAGCTTTATTTATGTC...GCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 72 bp | TCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTaGCCAAGGGGGCAATTTCTAAGTGACTGCATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SHNTSSQWKSGV*PRGQFLSDCIL Trigger: CAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 72 bp | ACTGGGGACATAAATAAAGCTTTGGTGCACAGGTTTTaGGGATGGGCCATAGGGAACACTGCCACTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: TGDINKALVHRF*GWAIGNTATQH Trigger: GTGTTGAGTGGCAGTGTTCCCTATGGCCCATCCCCAAAACCTGTGCACCAAAGCTTTATTTATGTCCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| 3UTR CCA 72 bp | GACATAAATAAAGCTTTGGTGCACAGGTTTTGGGGATaGGCCATAGGGAACACTGCCACTCAACACTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: DINKALVHRFWG*AIGNTATQHFT Trigger: TGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCCCATCCCCAAAACCTGTGCACCAAAGCTTTATTTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | TTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCCGTGCACGAAGCCATaGAGGGTGCAGTCCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVMLASSGQSVCSGVHGGPCTKP*RVQSEG Trigger: GCCCTCGGACTGCACCCTTCATGGCTTCGTGCACGG...GCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | GCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACGTGACAGGAAGTCAGTaGGCTCCACCCGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGQSVCSGVHGGLWDNVTGSQ*APPVPG Trigger: CCCTGGCACGGGTGGAGCGCACTGACTTCCTGTCAC...GTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | GCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACCGAAGCCATGAAGGGTaGAGTCCGAGGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSGQSVCSGVHGGLWDNRSHEG*SPRAPP Trigger: TGGTGGGGCCCTCGGACTGCACCCTTCATGGCTTCG...GTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | CACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCCCGTGCACGAAGCCATaGAGGGTGCAGTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HTTPALSGNRGFGQGGNFPCTKP*RVQSEG Trigger: GCCCTCGGACTGCACCCTTCATGGCTTCGTGCACGG...GAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | AGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCAGTGCGCTCCACCCGTaGCAGGGCAGCCACACAGCG | + |
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Preference number: 4 (lower is better) Translates to: SSQWKSGVWPRGQFLSDCSALHP*QGSHTA Trigger: CGCTGTGTGGCTGCCCTGGCACGGGTGGAGCGCACT...GCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | CTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACGAAGCCATGAAGGGTaGAGTCCGAGGGCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LLQASRCALVSMVAFGTTRSHEG*SPRAPP Trigger: TGGTGGGGCCCTCGGACTGCACCCTTCATGGCTTCG...TGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | TCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCCGTGCACGAAGCCATaGAGGGTGCAGTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SHNTSSQWKSGVWPRGQFPCTKP*RVQSEG Trigger: GCCCTCGGACTGCACCCTTCATGGCTTCGTGCACGG...AAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACCTCGAAAAGGCTACCTaGCTCCCCACCTCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHLEKAT*LPTSQR Trigger: CCTCTGGGAGGTGGGGAGGCAGGTAGCCTTTTCGAG...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGAGTGCGCTCCACCCGTaGCAGGGCAGCCACACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FISDAGFFRPVGVLWCPWSALHP*QGSHTA Trigger: CGCTGTGTGGCTGCCCTGGCACGGGTGGAGCGCACT...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | GCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATAGTGCGCTCCACCCGTaGCAGGGCAGCCACACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLVMLASSGQSVCSGVHSALHP*QGSHTA Trigger: CGCTGTGTGGCTGCCCTGGCACGGGTGGAGCGCACT...ATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | TTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCCGGTAGCGCTTTTGTaGGTTGTCCACCACAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LVMLASSGQSVCSGVHGGPVALL*VVHHRV Trigger: GACCCTGTGGTGGACAACTCACAAAAGCGCTACCGG...GCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | GCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGCGGCGGCGGAATCTaGGAACAGGTGTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALLVMLASSGQSVCSGVHGGGGI*EQVSSR Trigger: CCTGCTGGACACCTGTTCTCAGATTCCGCCGCCGCC...ATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075363.10 |
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| CDS-3UTR TCA 90 bp | GGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACGATCTGCTCTGGTTCTaGCAGCCCTCATGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GVWPRGQFLSDCILGYCHDLLWF*QPSWQP Trigger: GGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATC...GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | AGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCGATCTGCTCTGGTTCTaGCAGCCCTCATGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSQWKSGVWPRGQFLSDCDLLWF*QPSWQP Trigger: GGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATC...GCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | CCAGACAGCAGCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCCTCGAAAAGGCTACCTaGCTCCCCACCTCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PDSSFISDAGFFRPVGVLLEKAT*LPTSQR Trigger: CCTCTGGGAGGTGGGGAGGCAGGTAGCCTTTTCGAG...GAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGCTGCTGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACTTCTGGCTGTTACAGTaGCGCGTGCTGATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHFWLLQ*RVLMMA Trigger: GGCCATCATCAGCACGCGGCACTGTAACAGCCAGAA...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCCGTGCACGAAGCCATaGAGGGTGCAGTCCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNPCTKP*RVQSEG Trigger: GCCCTCGGACTGCACCCTTCATGGCTTCGTGCACGG...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | CTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGCCGGTAGCGCTTTTGTaGGTTGTCCACCACAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LNTSHNTSSQWKSGVWPRPVALL*VVHHRV Trigger: GACCCTGTGGTGGACAACTCACAAAAGCGCTACCGG...CCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | AGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACGTGACAGGAAGTCAGTaGGCTCCACCCGTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGQFLSDCILGYCHNCADVTGSQ*APPVPG Trigger: CCCTGGCACGGGTGGAGCGCACTGACTTCCTGTCAC...GTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | CAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACCCGGGAGTGACAGGAAGTCAGTaGGCTCCACCCGTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QFLSDCILGYCHNCADPGVTGSQ*APPVPG Trigger: CCCTGGCACGGGTGGAGCGCACTGACTTCCTGTCAC...TCCCGGGTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR GCA 90 bp | AGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACCGAAGCCATGAAGGGTaGAGTCCGAGGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQFLSDCILGYCHNCADRSHEG*SPRAPP Trigger: TGGTGGGGCCCTCGGACTGCACCCTTCATGGCTTCG...GTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACCTGAGGCACAGGCATTaGCTTGCCCTCCTGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TSSQWKSGVWPRGQFLSDLRHRH*LALLVQ Trigger: CTGAACCAGGAGGGCAAGCCAATGCCTGTGCCTCAG...GTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR TCA 90 bp | CTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGCATCATCTGGACGCATaGTCCGGCAGATCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: LNTSHNTSSQWKSGVWPRHHLDA*SGRSGW Trigger: CCATCCAGATCTGCCGGATCATGCGTCCAGATGATG...CCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075363.10 |
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| CDS-3UTR GCA 90 bp | TCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTTTCTGGCTGTTACAGTaGCGCGTGCTGATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHNTSSQWKSGVWPRGQFFWLLQ*RVLMMA Trigger: GGCCATCATCAGCACGCGGCACTGTAACAGCCAGAA...AAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTTCTGGCTGTTACAGTaGCGCGTGCTGATGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSQWKSGVWPRGQFLSDFWLLQ*RVLMMA Trigger: GGCCATCATCAGCACGCGGCACTGTAACAGCCAGAA...GTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATGTGACAGGAAGTCAGTaGGCTCCACCCGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNVTGSQ*APPVPG Trigger: CCCTGGCACGGGTGGAGCGCACTGACTTCCTGTCAC...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACTCCTCCTCCTGCTCCTaGCGTAAATACACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHSSSCS*RKYTMG Trigger: TCCCATTGTGTATTTACGGCAGGAGCAGGAGGAGGA...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACATCCTCCTCCTGCTCCTaGCGTAAATACACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLQASRCALVSMVAFGTTSSSCS*RKYTMG Trigger: TCCCATTGTGTATTTACGGCAGGAGCAGGAGGAGGA...TGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGAAGCCATGAAGGGTaGAGTCCGAGGGCCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNRSHEG*SPRAPP Trigger: TGGTGGGGCCCTCGGACTGCACCCTTCATGGCTTCG...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACAGCCGTAAATACACAATaGGAGGCACCTCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQASRCALVSMVAFGTTAVNTQ*EAPQGP Trigger: AGGTCCTTGAGGTGCCTCCCATTGTGTATTTACGGC...TGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATCTGAGGCACAGGCATTaGCTTGCCCTCCTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLVMLASSGQSVCSGVHLRHRH*LALLVQ Trigger: CTGAACCAGGAGGGCAAGCCAATGCCTGTGCCTCAG...ATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACAGTCCACATTCTTCAATaGCAGGGGCACATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQASRCALVSMVAFGTTVHILQ*QGHIPQ Trigger: TTGTGGTATGTGCCCCTGTCATTGAAGAATGTGGAC...TGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATACCGGTAGCGCTTTTGTaGGTTGTCCACCACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQWKSGVWPRGQFLSDCIPVALL*VVHHRV Trigger: GACCCTGTGGTGGACAACTCACAAAAGCGCTACCGG...TATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACATTACTATGTTGGTCTTaGAGTGGCGTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQASRCALVSMVAFGTTLLCWS*SGVQPQ Trigger: TTGTGGCTGCACGCCACTGCAAGACCAACATAGTAA...TGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCCACCGTGTTCGGCTCTaGGTTCAGGACAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGNTATQHFTQHQLSVEIHRVRL*VQDRLD Trigger: GTCCAGCCTGTCCTGAACCCAGAGCCGAACACGGTG...GATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCACCGTGTTCGGCTCTaGGTTCAGGACAGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNHRVRL*VQDRLD Trigger: GTCCAGCCTGTCCTGAACCCAGAGCCGAACACGGTG...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACCTGAGGCACAGGCATTaGCTTGCCCTCCTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQFLSDCILGYCHNCADLRHRH*LALLVQ Trigger: CTGAACCAGGAGGGCAAGCCAATGCCTGTGCCTCAG...GTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCCCAGAATGTTTTCCTaGGCCCCGAACACTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNPRMFS*APNTPG Trigger: GCCAGGAGTGTTCGGGGCTCAGGAAAACATTCTGGG...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACAGCAGCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTCTTGTCGTGGAAATTaGTGGCATCCACAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDSSFISDAGFFRPVGVLSCRGN*WHPQRQ Trigger: CTGCCTCTGTGGATGCCATCAATTTCCACGACAAGA...GAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGCTGCTGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGATCTTGTCGTGGAAATTaGTGGCATCCACAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHREHCHSTLHTTPALSGSCRGN*WHPQRQ Trigger: CTGCCTCTGTGGATGCCATCAATTTCCACGACAAGA...TCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACTCCTCCTCCTGCTCCTaGCGTAAATACACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVWPRGQFLSDCILGYCHSSSCS*RKYTMG Trigger: TCCCATTGTGTATTTACGGCAGGAGCAGGAGGAGGA...GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACCAATCATCTTCAGAATaGTCCCTCCATGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGQSVCSGVHGGLWDNQSSSE*SLHEHC Trigger: GCAATGTTCATGGAGGGACCATTCTGAAGATGATTG...GTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACGCCGTAAATACACAATaGGAGGCACCTCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSQWKSGVWPRGQFLSDAVNTQ*EAPQGP Trigger: AGGTCCTTGAGGTGCCTCCCATTGTGTATTTACGGC...GTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCCTGAGGCACAGGCATTaGCTTGCCCTCCTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGNTATQHFTQHQLSVEILRHRH*LALLVQ Trigger: CTGAACCAGGAGGGCAAGCCAATGCCTGTGCCTCAG...GATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | TCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTGTCCACATTCTTCAATaGCAGGGGCACATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SHNTSSQWKSGVWPRGQFVHILQ*QGHIPQ Trigger: TTGTGGTATGTGCCCCTGTCATTGAAGAATGTGGAC...AAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGTCCACATTCTTCAATaGCAGGGGCACATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTSHNTSSQWKSGVWPRVHILQ*QGHIPQ Trigger: TTGTGGTATGTGCCCCTGTCATTGAAGAATGTGGAC...CCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | ACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTCTTGTCGTGGAAATTaGTGGCATCCACAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLPLNTSHNTSSQWKSGVSCRGN*WHPQRQ Trigger: CTGCCTCTGTGGATGCCATCAATTTCCACGACAAGA...AACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTTACTATGTTGGTCTTaGAGTGGCGTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TSSQWKSGVWPRGQFLSDLLCWS*SGVQPQ Trigger: TTGTGGCTGCACGCCACTGCAAGACCAACATAGTAA...GTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCTTACTATGTTGGTCTTaGAGTGGCGTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQWKSGVWPRGQFLSDCLLCWS*SGVQPQ Trigger: TTGTGGCTGCACGCCACTGCAAGACCAACATAGTAA...GCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCCACATTGGCATCATCTaGACGCATGATCCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQWKSGVWPRGQFLSDCHIGII*THDPSH Trigger: ATGGGAAGGATCATGCGTCCAGATGATGCCAATGTG...GCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGGTCCACATTCTTCAATaGCAGGGGCACATACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FISDAGFFRPVGVLWCPWVHILQ*QGHIPQ Trigger: TTGTGGTATGTGCCCCTGTCATTGAAGAATGTGGAC...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATATCCTCCTCCTGCTCCTaGCGTAAATACACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQWKSGVWPRGQFLSDCISSSCS*RKYTMG Trigger: TCCCATTGTGTATTTACGGCAGGAGCAGGAGGAGGA...TATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATTTACTATGTTGGTCTTaGAGTGGCGTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLVMLASSGQSVCSGVHLLCWS*SGVQPQ Trigger: TTGTGGCTGCACGCCACTGCAAGACCAACATAGTAA...ATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACCCGGGAGCCGTAAATACACAATaGGAGGCACCTCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLSDCILGYCHNCADPGAVNTQ*EAPQGP Trigger: AGGTCCTTGAGGTGCCTCCCATTGTGTATTTACGGC...TCCCGGGTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGCCTTTGGGACAACACTGGGGACATAAATAAAGCTTTGGTGCACAGGGCCGTAAATACACAATaGGAGGCACCTCAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HGGLWDNTGDINKALVHRAVNTQ*EAPQGP Trigger: AGGTCCTTGAGGTGCCTCCCATTGTGTATTTACGGC...CCTGTGCACCAAAGCTTTATTTATGTCCCCAGTGTTGTCCCAAAGGCCACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGGCCTTTGGGACAACACTGGGGACATAAATAAAGCTTTGGTGCACAGGCACATTGGCATCATCTaGACGCATGATCCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGGLWDNTGDINKALVHRHIGII*THDPAD Trigger: ATCTGCCGGATCATGCGTCCAGATGATGCCAATGTG...CCTGTGCACCAAAGCTTTATTTATGTCCCCAGTGTTGTCCCAAAGGCCACCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075363.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATATGTCCAAGCTTTTGGTaGTCTGCTCTGGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SQWKSGVWPRGQFLSDCICPSFW*SALVLT Trigger: TGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACA...TATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACAACTGTGCTGACTGTCCAAGCTTTTGGTaGTCTGCTCTGGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RGQFLSDCILGYCHNCADCPSFW*SALVLT Trigger: TGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACA...GTCAGCACAGTTGTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACCAATCATCTTCAGAATaGTCCCTCCATGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSSQWKSGVWPRGQFLSDQSSSE*SLHEHC Trigger: GCAATGTTCATGGAGGGACCATTCTGAAGATGATTG...GTCACTTAGAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCCACATTGGCATCATCTaGACGCATGATCCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGNTATQHFTQHQLSVEIHIGII*THDPSH Trigger: ATGGGAAGGATCATGCGTCCAGATGATGCCAATGTG...GATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGCAATCATCTTCAGAATaGTCCCTCCATGAACATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FISDAGFFRPVGVLWCPWQSSSE*SLHEHC Trigger: GCAATGTTCATGGAGGGACCATTCTGAAGATGATTG...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
||
| CDS-3UTR CCA 90 bp | CATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCACATTGGCATCATCTaGACGCATGATCTGTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HREHCHSTLHTTPALSGNHIGII*THDLFD Trigger: GTCAAACAGATCATGCGTCCAGATGATGCCAATGTG...ATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105652.3 |
||
| CDS-3UTR CAA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACGGCACAGGCATTGGCTaGCCCTCCTGGTTCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHGTGIG*PSWFRD Trigger: GTCCCTGAACCAGGAGGGCAAGCCAATGCCTGTGCC...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS CCA 90 bp | ACGGCCTTTGCCTTCTTCGAAGCGCTTCTTCTCATCCTCCGTCTCTaGCACAAGCTGAGGCACAGGCATTGGCTTGCCCTCCTGGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TAFAFFEALLLILRL*HKLRHRHWLALLVQ Trigger: CTGAACCAGGAGGGCAAGCCAATGCCTGTGCCTCAGCTTGTGCCAGAGACGGAGGATGAGAAGAAGCGCTTCGAAGAAGGCAAAGGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | GGCCATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAGGCACAGGCATTGGCTaGCCCTCCTGGTTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GHREHCHSTLHTTPALSGGTGIG*PSWFRD Trigger: GTCCCTGAACCAGGAGGGCAAGCCAATGCCTGTGCC...TCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | GGGGTTTGGCCAAGGGGGCAATTTCTAAGTGACTGCATACTGGGCTATTGCCACGGCACAGGCATTGGCTaGCCCTCCTGGTTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: GVWPRGQFLSDCILGYCHGTGIG*PSWFRD Trigger: GTCCCTGAACCAGGAGGGCAAGCCAATGCCTGTGCC...GTGGCAATAGCCCAGTATGCAGTCACTTAGAAATTGCCCCCTTGGCCAAACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGGGCACAGGCATTGGCTaGCCCTCCTGGTTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: FISDAGFFRPVGVLWCPWGTGIG*PSWFRD Trigger: GTCCCTGAACCAGGAGGGCAAGCCAATGCCTGTGCC...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS GCA 90 bp | CTGTGTGGCCCTGTCGCTTCGCCTTCATCTGCAGATAACGGCCTTTaGCTTCTTCGAAGCGCTTCTTCTCATCCTCCGTCTCTGGCACAA | + |
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Preference number: 5 (lower is better) Translates to: LCGPVASPSSADNGL*LLRSASSHPPSLAQ Trigger: TTGTGCCAGAGACGGAGGATGAGAAGAAGCGCTTCGAAGAAGGCAAAGGCCGTTATCTGCAGATGAAGGCGAAGCGACAGGGCCACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | TTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTGGCCTTTGGGACAACACGGCACCTCAAGGACCTaGTCCACATTCTTCAATGAC | + |
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Preference number: 5 (lower is better) Translates to: FFRPVGVLWCPWWPLGQHGTSRT*STFFND Trigger: GTCATTGAAGAATGTGGACAAGGTCCTTGAGGTGCC...GTGTTGTCCCAAAGGCCACCATGGACACCAGAGCACACCGACTGGCCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS TCA 90 bp | GGACGCATGATCCTTCCCATGGTGACGCAATGTCCAAGCTTTTGGTaGTCTGCTCTGGTTCTGACAGCCCTCATGGCAGCCCAGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: GRMILPMVTQCPSFW*SALVLTALMAAQNV Trigger: AACATTCTGGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGAAGGATCATGCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | CTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATATCTTGTCGTGGAAATaGATGGCATCCACAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LHTTPALSGNRGFGQGGNILSWK*MASTEA Trigger: TGCCTCTGTGGATGCCATCAATTTCCACGACAAGAT...ATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS GCA 90 bp | CATGATCCTTCCCATGGTGACGCAATGTCCAAGCTTTTGGTGATCTaGTCTGGTTCTGACAGCCCTCATGGCAGCCCAGAATGTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HDPSHGDAMSKLLVI*SGSDSPHGSPECFP Trigger: AGGAAAACATTCTGGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGAAGGATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | GGCCATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAATCTTGTCGTGGAAATaGATGGCATCCACAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GHREHCHSTLHTTPALSGILSWK*MASTEA Trigger: TGCCTCTGTGGATGCCATCAATTTCCACGACAAGAT...TCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | CTTCACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTATTGGTCAGCTTTTaGGTACCTGTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: LHTTPALSGNRGFGQGGNLLVSF*VPVRMF Trigger: GAACATCCTCACAGGTACCAAAAAGCTGACCAATAA...ATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | CACACAACACCAGCTCTCAGTGGAAATCGGGGGTTTGGCCAAGGGGGCAATTTCTTATTGGTCAGCTTTTaGGTACCTGTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: HTTPALSGNRGFGQGGNFLLVSF*VPVRMF Trigger: GAACATCCTCACAGGTACCAAAAAGCTGACCAATAA...GAAATTGCCCCCTTGGCCAAACCCCCGATTTCCACTGAGAGCTGGTGTTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | TTTATTAGTGATGCTGGCTTCTTCAGGCCAGTCGGTGTGCTCTGGTGTCCATGGTTATTGGTCAGCTTTTaGGTACCTGTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: FISDAGFFRPVGVLWCPWLLVSF*VPVRMF Trigger: GAACATCCTCACAGGTACCAAAAAGCTGACCAATAA...CCATGGACACCAGAGCACACCGACTGGCCTGAAGAAGCCAGCATCACTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCATCTTGTCGTGGAAATaGATGGCATCCACAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: IGNTATQHFTQHQLSVEIILSWK*MASTEA Trigger: TGCCTCTGTGGATGCCATCAATTTCCACGACAAGAT...GATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS-3UTR CAA 90 bp | ATAGGGAACACTGCCACTCAACACTTCACACAACACCAGCTCTCAGTGGAAATCTTATTGGTCAGCTTTTaGGTACCTGTGAGGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: IGNTATQHFTQHQLSVEILLVSF*VPVRMF Trigger: GAACATCCTCACAGGTACCAAAAAGCTGACCAATAA...GATTTCCACTGAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS GCA 72 bp | CACTCCTGGCCAGGCGTCAGGCTCGAAAAGGCTACCTaGCTCCCCACCTCCCAGAGGCGCAGAGTCCCGACC | + |
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Preference number: 6 (lower is better) Translates to: HSWPGVRLEKAT*LPTSQRRRVPT Trigger: GGTCGGGACTCTGCGCCTCTGGGAGGTGGGGAGGCAGGTAGCCTTTTCGAGCCTGACGCCTGGCCAGGAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS CCA 72 bp | GCCTTCTTCGAAGCGCTTCTTCTCATCCTCCGTCTCTaGCACAAGCTGAGGCACAGGCATTGGCTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: AFFEALLLILRL*HKLRHRHWLAL Trigger: GAGGGCAAGCCAATGCCTGTGCCTCAGCTTGTGCCAGAGACGGAGGATGAGAAGAAGCGCTTCGAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS TCA 72 bp | ATCCTTCCCATGGTGACGCAATGTCCAAGCTTTTGGTaGTCTGCTCTGGTTCTGACAGCCCTCATGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ILPMVTQCPSFW*SALVLTALMAA Trigger: GGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS GCA 72 bp | TCCCATGGTGACGCAATGTCCAAGCTTTTGGTGATCTaGTCTGGTTCTGACAGCCCTCATGGCAGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SHGDAMSKLLVI*SGSDSPHGSPE Trigger: TTCTGGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS GCA 72 bp | CCTGTCGCTTCGCCTTCATCTGCAGATAACGGCCTTTaGCTTCTTCGAAGCGCTTCTTCTCATCCTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: PVASPSSADNGL*LLRSASSHPPS Trigger: AGACGGAGGATGAGAAGAAGCGCTTCGAAGAAGGCAAAGGCCGTTATCTGCAGATGAAGGCGAAGCGACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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| CDS CAA 90 bp | ATCTGGACGCATGATCCTTCCCATGGTGACGCAATGTCCAAGCTTTaGGTGATCTGCTCTGGTTCTGACAGCCCTCATGGCAGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: IWTHDPSHGDAMSKL*VICSGSDSPHGSPE Trigger: TTCTGGGCTGCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGAAGGATCATGCGTCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS CAA 72 bp | CATGATCCTTCCCATGGTGACGCAATGTCCAAGCTTTaGGTGATCTGCTCTGGTTCTGACAGCCCTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: HDPSHGDAMSKL*VICSGSDSPHG Trigger: GCCATGAGGGCTGTCAGAACCAGAGCAGATCACCAAAAGCTTGGACATTGCGTCACCATGGGAAGGATCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030779.10 ENSMUST00000167926.8 |
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| CDS CAA 72 bp | GTGATGACACAGCCTTTCCGGATCTTGTCGTGGAAATaGATGGCATCCACAGAGGCAGTTACTATGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VMTQPFRILSWK*MASTEAVTMLV Trigger: GACCAACATAGTAACTGCCTCTGTGGATGCCATCAATTTCCACGACAAGATCCGGAAAGGCTGTGTCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030779.10 ENSMUST00000075363.10 ENSMUST00000105652.3 ENSMUST00000167926.8 |
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