Pregenerated sensors for ACOT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043487Ensembl transcript IDs: ENSMUST00000056822.4, ENSMUST00000222921.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGAGACCCCCATACCCGACTGGGGTGGTCTGTGGCAAGTGCTTGTaGTTGAATGTCCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: RRPPYPTGVVCGKCL*LNVLVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACCAGGACATTCAAGCACAAGCACTTGCCACAGACCACCCCAGTCGGGTATGGGGGTCTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CCA 90 bp | ACCCCAGCACTGAGAGGAGAGTCATTGCAAAGGCCCAGAGTCCAGTaGGAGCCTTACAAGGAGGCTGAGCTTCCTATGAGCTTCGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: TPALRGESLQRPRVQ*EPYKEAELPMSFVG Trigger: CCCTACGAAGCTCATAGGAAGCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR TCA 90 bp | ACAGATCCATTAGCTGAACTTCAGAGGAGAGAGAAACCCCAGCACTaGGAGGAGAGTCATTGCAAAGGCCCAGAGTCCAGTGGGAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: TDPLAELQRREKPQH*EESHCKGPESSGSL Trigger: AAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCTGAAGTTCAGCTAATGGATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR TCA 90 bp | CACACTAGCCTCACACTTGCTTTGCAATGTAGGATCTTGAGCTCTTaGTCCTCCTGCCTCAGCCTCGCAAGTGCCCGGGATTTCAAATGT | + |
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Preference number: 1 (lower is better) Translates to: HTSLTLALQCRILSS*SSCLSLASARDFKC Trigger: ACATTTGAAATCCCGGGCACTTGCGAGGCTGAGGCAGGAGGATCAAGAGCTCAAGATCCTACATTGCAAAGCAAGTGTGAGGCTAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CCA 90 bp | TCTTGGATAGAATGCCTGACGCCGTGGTTGGATGACCACAGGTTCTaGGTTCTCATTTCTGAGAAACAGAAACTTAGGCCTAGTCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: SWIECLTPWLDDHRF*VLISEKQKLRPSLP Trigger: TGGGAGACTAGGCCTAAGTTTCTGTTTCTCAGAAATGAGAACCCAGAACCTGTGGTCATCCAACCACGGCGTCAGGCATTCTATCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR CCA 90 bp | GGTTCTGTGTACAGCCAGGAAACCATGGGGTTTGACCTGAAGTCTTaGAAGACTTTCTTGTGCTCAGGGATGATCCTCTACTCTGGAATC | + |
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Preference number: 1 (lower is better) Translates to: GSVYSQETMGFDLKS*KTFLCSGMILYSGI Trigger: GATTCCAGAGTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTCAGGTCAAACCCCATGGTTTCCTGGCTGTACACAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR CCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTaGCTTGGCGAAAGGTTCTGTGTACAGCCAGGAAACCATGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RVLSLPLREKRSESY*LGERFCVQPGNHGV Trigger: AACCCCATGGTTTCCTGGCTGTACACAGAACCTTTCGCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR GCA 90 bp | CAGGAAACCATGGGGTTTGACCTGAAGTCTTGGAAGACTTTCTTGTaGTCAGGGATGATCCTCTACTCTGGAATCTCAGGACTAGATAAC | + |
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Preference number: 1 (lower is better) Translates to: QETMGFDLKSWKTFL*SGMILYSGISGLDN Trigger: GTTATCTAGTCCTGAGATTCCAGAGTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTCAGGTCAAACCCCATGGTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR CCA 90 bp | CTTCCTCAACAGTTCTTCATGTTATTTTTGAAAACTGGAGCTCACTaGCAGGCTGAACTGGCGGTTAACAAAGCCCGGGAATCCTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LPQQFFMLFLKTGAH*QAELAVNKARESCL Trigger: CAAACAGGATTCCCGGGCTTTGTTAACCGCCAGTTCAGCCTGCCAGTGAGCTCCAGTTTTCAAAAATAACATGAAGAACTGTTGAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR TCA 90 bp | GTAGCCTGTCATAGATTAACCCTTAGTCCCTTGATGTTCATCCTATaGAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: VACHRLTLSPLMFIL*KLWVLSLARHSTRH Trigger: ATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGATGAACATCAAGGGACTAAGGGTTAATCTATGACAGGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR TCA 90 bp | CTTAAGGTTAAAGTTGGTCTTACAGAGTTAAACAGATCCATTAGCTaGACTTCAGAGGAGAGAGAAACCCCAGCACTGAGAGGAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: LKVKVGLTELNRSIS*TSEERETPALRGES Trigger: TGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCTGAAGTTCAGCTAATGGATCTGTTTAACTCTGTAAGACCAACTTTAACCTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR GCA 90 bp | GTTCTCATTTCTGAGAAACAGAAACTTAGGCCTAGTCTCCCAAATTaGCAGTTTGTAGCCTGTCATAGATTAACCCTTAGTCCCTTGATG | + |
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Preference number: 1 (lower is better) Translates to: VLISEKQKLRPSLPN*QFVACHRLTLSPLM Trigger: CATCAAGGGACTAAGGGTTAATCTATGACAGGCTACAAACTGGCAATTTGGGAGACTAGGCCTAAGTTTCTGTTTCTCAGAAATGAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR GCA 90 bp | CCGGCGGTCCCACGTACCAAGCAGACATTAGTAAAGTTTAGAAAGTaGCCAAGAGTTGTAAAAATGAAGGATATTCTCTTATTTTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: PAVPRTKQTLVKFRK*PRVVKMKDILLFCA Trigger: TGCACAAAATAAGAGAATATCCTTCATTTTTACAACTCTTGGGCACTTTCTAAACTTTACTAATGTCTGCTTGGTACGTGGGACCGCCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CCA 90 bp | CATGAGGTTACAAGTTTGTCTGGCTATATAAGCAACAACAAGGCTTaGATGGTCATGTTTATGTTTAACAGTGGGACAGCATGCAAGATG | + |
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Preference number: 1 (lower is better) Translates to: HEVTSLSGYISNNKA*MVMFMFNSGTACKM Trigger: CATCTTGCATGCTGTCCCACTGTTAAACATAAACATGACCATCCAAGCCTTGTTGTTGCTTATATAGCCAGACAAACTTGTAACCTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR TCA 90 bp | TTGTTTGCTTTGTCTTATTTAAACCTTGATAACATTGTGGTGTTTTaGATAAGAACGGGCCACATAAGCCCATATACCTCAGTACTTAGT | + |
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Preference number: 1 (lower is better) Translates to: LFALSYLNLDNIVVF*IRTGHISPYTSVLS Trigger: ACTAAGTACTGAGGTATATGGGCTTATGTGGCCCGTTCTTATTCAAAACACCACAATGTTATCAAGGTTTAAATAAGACAAAGCAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR GCA 90 bp | GGTTCCCTCACAAGCAGAATAAAAGACAGTCCAGTAACTGGGAGTTaGATAAATACTTCTTATATTCTTTTACTTAAGGTTAAAGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: GSLTSRIKDSPVTGS*INTSYILLLKVKVG Trigger: ACCAACTTTAACCTTAAGTAAAAGAATATAAGAAGTATTTATGCAACTCCCAGTTACTGGACTGTCTTTTATTCTGCTTGTGAGGGAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTGGCTGGATTGTCTGGGGAATTTaGAGGAGGGGGATGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: AELPMSFVGSWGCSFAGWIVWGI*RRGMCP Trigger: AGGGCACATCCCCCTCCTTCAAATTCCCCAGACAAT...CCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR CAA 90 bp | GTGTTTGCTTCTGTTTGTCTCCGCCAAATCCTTACCCACCTAGCTTaGAGGACCCTCAATTCCGGAGACCCCCATACCCGACTGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VFASVCLRQILTHLA*RTLNSGDPHTRLGW Trigger: CCACCCCAGTCGGGTATGGGGGTCTCCGGAATTGAGGGTCCTCAAAGCTAGGTGGGTAAGGATTTGGCGGAGACAAACAGAAGCAAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTCATTGCAAAGGCCCAGAGTCCAGTGGGAGCCTTACAAGGAGGCTGAGCTCTGGGTTTTGTCCTTaGCAAGGCATAGCACTAGGC | + |
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Preference number: 2 (lower is better) Translates to: ESHCKGPESSGSLTRRLSSGFCP*QGIALG Trigger: GCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGA...GCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTGGCTGGCCTAGTCTCCCAAATTaGCAGTTTGTAGCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: AELPMSFVGSWGCSFAGWPSLPN*QFVACH Trigger: ATGACAGGCTACAAACTGGCAATTTGGGAGACTAGG...CCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR CCA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTATTGACCTCAAAAGGTaGAGGCCTCCTGGAACCGGT | + |
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Preference number: 2 (lower is better) Translates to: NTASICVCVCSVTSRRICIDLKR*RPPGTG Trigger: ACCGGTTCCAGGAGGCCTCCACCTTTTGAGGTCAAT...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CAA 90 bp | GGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTaGAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GRVALLEKLCHWEWV*KFQKPTIGLMWLSL Trigger: CAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTCAAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCATGCCAAATGTCCTCATaGAGGGGCAAGGATAACTCT | + |
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Preference number: 2 (lower is better) Translates to: EVSKAHNRPDVALSAYGSCQMSS*RGKDNS Trigger: AGAGTTATCCTTGCCCCTTCATGAGGACATTTGGCA...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCGAGAAAGTGACTCCGTaGGTAGAACTGTGCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RVLSLPLREKRSESYWLGEKVTP*VELCPK Trigger: CTTTGGGCACAGTTCTACCCACGGAGTCACTTTCTC...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR CAA 90 bp | AGCCAGGAAACCATGGGGTTTGACCTGAAGTCTTGGAAGACTTTCTaGTGCTCAGGGATGATCCTCTACTCTGGAATCTCAGGACTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SQETMGFDLKSWKTF*CSGMILYSGISGLD Trigger: ATCTAGTCCTGAGATTCCAGAGTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTCAGGTCAAACCCCATGGTTTCCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTGCAAGTGCTTGTGCTTaGATGTCCTGGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFASACA*MSWCVC Trigger: ACACACACACCAGGACATTCAAGCACAAGCACTTGC...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGGCCTCACAGCATTTTACAGGCATTGCCTCTGGTGCCCAGCTTTTTACCTGACAAGCACAAAACTCTaGAGATATTGCCAAATGTCC | + |
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Preference number: 2 (lower is better) Translates to: RGLTAFYRHCLWCPAFYLTSTKL*RYCQMS Trigger: GGACATTTGGCAATATCTGCAGAGTTTTGTGCTTGT...CAGGTAAAAAGCTGGGCACCAGAGGCAATGCCTGTAAAATGCTGTGAGGCCTCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCCCCCGGGGAAACCAATaGTTTACTTTCGAAATCATT | + |
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Preference number: 2 (lower is better) Translates to: RETVSKTGTGLSSSHRRSPRGNQ*FTFEII Trigger: AATGATTTCGAAAGTAAAGCATTGGTTTCCCCGGGG...GGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTAGGATAACTCTAGGTTaGAAACCACCACCAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: NTASICVCVCSVTSRRICRITLG*KPPPAC Trigger: ACATGCTGGTGGTGGTTTTCAACCTAGAGTTATCCT...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTATTTGTGTATGTGTGTaGTCTGTGACCTCCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFICVCV*SVTSRR Trigger: CCTCCTGGAGGTCACAGAGCACACACATACACAAAT...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGAGAGAAACCCCAGCACTGAGAGGAGAGTCATTGCAAAGGCCCAGAGTGCCCTTTATCTTGATTaGTTAGTTCTATCAATAGGG | + |
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Preference number: 2 (lower is better) Translates to: RGERNPSTERRVIAKAQSALYLD*LVLSIG Trigger: CCCTATTGATAGAACTAACCAATCAAGATAAAGGGC...ACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTTACCTGGGTATTGGGGACTTGAACTCAGTCAGATCTTCATGGTTGCCAAGCCTATACTAGCTAAATaGAAACAGCACCCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FLPGYWGLELSQIFMVAKPILAK*KQHPLP Trigger: GGGGAGGGGGTGCTGTTTCCATTTAGCTAGTATAGG...CTTGGCAACCATGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAGGTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCAACTCTTAAAGAAGATTaGGAGAATTTGGAGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: EVSKAHNRPDVALSAYGSTLKED*ENLESG Trigger: CCCACTCTCCAAATTCTCTCAATCTTCTTTAAGAGT...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGCTTGTGCTTGAATGTCCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTCATGTTATTTTTaGAAACTGGAGCTCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: QVLVLECPGVCVCVCVCVSSCYF*KLELTG Trigger: GCCAGTGAGCTCCAGTTTTCAAAAATAACATGAAGA...CACACACACACACACACACACACACACACCAGGACATTCAAGCACAAGCACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAGCTGCAAAATACACTCAGATTCAAACGGCCTGTGTTTGCTTCTGTTTGGTGGTCTGTGGCAAGTaGTTGTGCTTGAATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRAAKYTQIQTACVCFCLVVCGK*LCLNVL Trigger: CAGGACATTCAAGCACAAGCACTTGCCACAGACCAC...CAAACAGAAGCAAACACAGGCCGTTTGAATCTGAGTGTATTTTGCAGCTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCATATTTGGGATTGCTTTaGTGGATACAGTCTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: EVSKAHNRPDVALSAYGSYLGLL*WIQSPR Trigger: TCTTGGAGACTGTATCCAGCAAAGCAATCCCAAATA...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATGACCACAGGTTCTGGGTTCTCATTTCTGAGAAACAGAAACTTAGGCCTAACGCATGGTGGAAGCTaGAGGATTAGAAGTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: WMTTGSGFSFLRNRNLGLTHGGS*RIRSSS Trigger: GGAAGAACTTCTAATCCTCCAGCTTCCACCATGCGT...TAGGCCTAAGTTTCTGTTTCTCAGAAATGAGAACCCAGAACCTGTGGTCATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAGCTGCAAAATACACTCAGATTCAAACGGCCTGTGTTTGCTTCTGTTTGAAGCAATTTACCGACTaGGCTGTCTCCCAGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: LRAAKYTQIQTACVCFCLKQFTD*AVSQHN Trigger: ATTGTGCTGGGAGACAGCTCAGTCGGTAAATTGCTT...CAAACAGAAGCAAACACAGGCCGTTTGAATCTGAGTGTATTTTGCAGCTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCTGTGGCAAGTGCTTGTaGTTGAATGTCCTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVCGKCL*LNVLVC Trigger: ACACACCAGGACATTCAAGCACAAGCACTTGCCACA...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTTCAGTCAGATCTTCATaGTTGCCAAGCAAGCAATTT | + |
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Preference number: 2 (lower is better) Translates to: NTASICVCVCSVTSRRICSVRSS*LPSKQF Trigger: AAATTGCTTGCTTGGCAACCATGAAGATCTGACTGA...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTCAGAGTTGTGATGCTTaGATGATTTTTGTGCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: NTASICVCVCSVTSRRICQSCDA*MIFVLH Trigger: GTGAAGCACAAAAATCATCCAAGCATCACAACTCTG...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTGGGTTAAAGGCTCTTTaGAAGTTTGATGTGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFGLKAL*KFDVKG Trigger: TCCTTTCACATCAAACTTTCAAAGAGCCTTTAACCC...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CAA 90 bp | AAGGTCAATACTGGATGTCTTCCTCAACAGTTCTTCATGTTATTTTaGAAAACTGGAGCTCACTGGCAGGCTGAACTGGCGGTTAACAAA | + |
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Preference number: 2 (lower is better) Translates to: KVNTGCLPQQFFMLF*KTGAHWQAELAVNK Trigger: TTTGTTAACCGCCAGTTCAGCCTGCCAGTGAGCTCCAGTTTTCAAAAATAACATGAAGAACTGTTGAGGAAGACATCCAGTATTGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGGAATTTGAAGGAGGGGGATGTGCCCTTTATCTTGATTGGTTAGTTCTATTGATGTTCATCCTATaGAAACTCTGGGTTTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SGEFEGGGCALYLDWLVLLMFIL*KLWVLS Trigger: GGACAAAACCCAGAGTTTTCATAGGATGAACATCAA...TAGAACTAACCAATCAAGATAAAGGGCACATCCCCCTCCTTCAAATTCCCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGCTGGCATTTAGTGGATTTCAAGTTGCACTCCCTCTTCAGCATATAGTTAAGATTGAGAGAATTTaGAGAGTGGGGACAAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: VWLAFSGFQVALPLQHIVKIERI*RVGTRL Trigger: TAACCTTGTCCCCACTCTCCAAATTCTCTCAATCTT...AACTATATGCTGAAGAGGGAGTGCAACTTGAAATCCACTAAATGCCAGCCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCTTGGGATTGCTTTGCTaGATACAGTCTCCAAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVLGLLC*IQSPRV Trigger: AACTCTTGGAGACTGTATCCAGCAAAGCAATCCCAA...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCTCCAGTCTTCATTTTTaGCAAGCACAAAACTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVSSLHF*QAQNSA Trigger: TGCAGAGTTTTGTGCTTGTCAAAAATGAAGACTGGA...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CAA 90 bp | TTTTTGTGCTTCACTGTGCCGAATGATTTTTGTTGGTATTTGGGATaGCTTTGCTGGATACAGTCTCCAAGAGTTGTAGTGTTTGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLCFTVPNDFCWYLG*LCWIQSPRVVVFGF Trigger: AAACCCAAACACTACAACTCTTGGAGACTGTATCCAGCAAAGCAATCCCAAATACCAACAAAAATCATTCGGCACAGTGAAGCACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCACATTTCATAGTCATAGTCATCTTGACATCAAAACCTTTTTCCCAGACAGGGATGACCACAGGTTCTaGGTTCTCATTTCTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTFHSHSHLDIKTFFPDRDDHRF*VLISEK Trigger: TTTCTCAGAAATGAGAACCCAGAACCTGTGGTCATC...CCTGTCTGGGAAAAAGGTTTTGATGTCAAGATGACTATGACTATGAAATGTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGAGCTGCAAAATACACTCAGATTCAAACGGCCTGTGTTTGCTTCTGTTTGCATTGTCTTCATTTGTaGGTTAAAGGCTCTTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LRAAKYTQIQTACVCFCLHCLHL*VKGSLK Trigger: TTTCAAAGAGCCTTTAACCCACAAATGAAGACAATG...CAAACAGAAGCAAACACAGGCCGTTTGAATCTGAGTGTATTTTGCAGCTCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR GCA 72 bp | AGACCCCCATACCCGACTGGGGTGGTCTGTGGCAAGTaGTTGTGCTTGAATGTCCTGGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RPPYPTGVVCGK*LCLNVLVCVCV Trigger: CACACACACACACACCAGGACATTCAAGCACAAGCACTTGCCACAGACCACCCCAGTCGGGTATGGGGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | AAGGAGGCTGAGCTTCCTATGAGCTTCGTAGGGAGCTaGGGATGCAGCTTTGCTGGCTGGATGCATGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KEAELPMSFVGS*GCSFAGWMHAC Trigger: ACAGGCATGCATCCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGCCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | CTGAGAGGAGAGTCATTGCAAAGGCCCAGAGTCCAGTaGGAGCCTTACAAGGAGGCTGAGCTTCCTATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRGESLQRPRVQ*EPYKEAELPMS Trigger: GCTCATAGGAAGCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | TATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTaGCTGGATGCATGCCTGTTAGGGTATAAGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YELRRELGMQLC*LDACLLGYKTH Trigger: GTGAGTCTTATACCCTAACAGGCATGCATCCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | CAAGTTCCACAGACTGAGGCGATTGACCTCAAAAGGTaGAGGCCTCCTGGAACCGGTTGTGGAACTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QVPQTEAIDLKR*RPPGTGCGTIC Trigger: GCAAATAGTTCCACAACCGGTTCCAGGAGGCCTCCACCTTTTGAGGTCAATCGCCTCAGTCTGTGGAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | CTGTGTTCTGCAATGACTCTAGTACTTTCCTGTGGCTaGGAGGGGTGCGCCAGGAACCATGTTTCTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LCSAMTLVLSCG*EGCARNHVSPV Trigger: AACAGGAGAAACATGGTTCCTGGCGCACCCCTCCCAGCCACAGGAAAGTACTAGAGTCATTGCAGAACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGTCATTGCAAAGGCCCAGAGTCCAGTGGGAGCCTTACAAGGAGGCTGAGCAAGGCCCAGCTTTTATaGTCTGGGGAATTTGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESHCKGPESSGSLTRRLSKAQLL*SGEFEG Trigger: TCCTTCAAATTCCCCAGACAATAAAAGCTGGGCCTT...GCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTTGGCAGTCCTGTTACTaGCTCTGTAGACCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NTASICVCVCSVTSRRICWQSCY*LCRPGW Trigger: CCAGCCTGGTCTACAGAGCAAGTAACAGGACTGCCA...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR TCA 72 bp | TTAGCTGAACTTCAGAGGAGAGAGAAACCCCAGCACTaGGAGGAGAGTCATTGCAAAGGCCCAGAGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LAELQRREKPQH*EESHCKGPESS Trigger: ACTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCTGAAGTTCAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR TCA 72 bp | ACACTAGCCTCACACTTGCTTTGCAATGTAGGATCTTaGGCTCTTGATCCTCCTGCCTCAGCCTCGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLASHLLCNVGS*ALDPPASASQV Trigger: CACTTGCGAGGCTGAGGCAGGAGGATCAAGAGCTCAAGATCCTACATTGCAAAGCAAGTGTGAGGCTAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR GCA 72 bp | AGGGAGCTGGGGATGCAGCTTTGCTGGCTGGATGCATaGCTGTTAGGGTATAAGACTCACCAGAGAATGATA | + |
|
Preference number: 3 (lower is better) Translates to: RELGMQLCWLDA*LLGYKTHQRMI Trigger: TATCATTCTCTGGTGAGTCTTATACCCTAACAGGCATGCATCCAGCCAGCAAAGCTGCATCCCCAGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | GCATTGCCTCTGGTGCCCAGCTTTTTACCTGGGTATTaGGGACTTGAACTCAGTCAGATCTTCATGGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALPLVPSFLPGY*GLELSQIFMVA Trigger: GGCAACCATGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAGGTAAAAAGCTGGGCACCAGAGGCAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCCTCTGGGTTTTGTCCTaGGCAAGGCATAGCACTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RVLSLPLREKRSESYWLGLWVLS*ARHSTR Trigger: CCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAG...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCTATTGTCTGGGGAATTaGAAGGAGGGGGATGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RVLSLPLREKRSESYWLGYCLGN*KEGDVP Trigger: GGGCACATCCCCCTCCTTCAAATTCCCCAGACAATA...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGTTTGCTTCTGTTTGTCTCCGCCAAATCCTTACCCACCTAGCTTTGAGGGGGGCTGTTCAGTATTaGGTGGGAAGGGTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PVFASVCLRQILTHLALRGAVQY*VGRVES Trigger: ACTTTCTACCCTTCCCACCAAATACTGAACAGCCCC...CCTCAAAGCTAGGTGGGTAAGGATTTGGCGGAGACAAACAGAAGCAAACACAGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR TCA 72 bp | TCTGGTGCCCAGCTTTTTACCTGGGTATTGGGGACTTaGACTCAGTCAGATCTTCATGGTTGCCAAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGAQLFTWVLGT*TQSDLHGCQAS Trigger: GCTTGCTTGGCAACCATGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAGGTAAAAAGCTGGGCACCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | AGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTaGCTTGGCGAAAGGTTCTGTGTACAGCCAGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPLREKRSESY*LGERFCVQPGN Trigger: GTTTCCTGGCTGTACACAGAACCTTTCGCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR CAA 90 bp | CTATTTGTTGTATGTCTTCGGCAGGTGGGTTCCCTCACAAGCAGAATAAAAGACCTGAGAGGAGAGTCATaGCAAAGGCCCAGAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFVVCLRQVGSLTSRIKDLRGES*QRPRVQ Trigger: CTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAG...GTCTTTTATTCTGCTTGTGAGGGAACCCACCTGCCGAAGACATACAACAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCGTCAGATCTTCATGGTaGCCAAGCAAGCAATTTACC | + |
|
Preference number: 3 (lower is better) Translates to: RETVSKTGTGLSSSHRRSVRSSW*PSKQFT Trigger: GGTAAATTGCTTGCTTGGCAACCATGAAGATCTGAC...GGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTCTTACCCACCTAGCTTaGAGGACCCTCAATTCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFLTHLA*RTLNSG Trigger: TCCGGAATTGAGGGTCCTCAAAGCTAGGTGGGTAAG...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCCACGTACCAAGCAGACATGATTTTTGTTGGTATTaGGGATTGCTTTGCTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TGTGLSSSHRRSHVPSRHDFCWY*GLLCWI Trigger: TATCCAGCAAAGCAATCCCAAATACCAACAAAAATC...ATGTCTGCTTGGTACGTGGGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCTTCTTAGACCAGGGTTaGCCAACATCAACACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RETVSKTGTGLSSSHRRSFLDQG*PTSTQH Trigger: ATGCTGTGTTGATGTTGGCAAACCCTGGTCTAAGAA...GGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCCACGTACCAAGCAGACATGGATATTCTCTTATTTaGTGCAACAACCACCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGTGLSSSHRRSHVPSRHGYSLI*CNNHQS Trigger: ACTTTGGTGGTTGTTGCACAAAATAAGAGAATATCC...ATGTCTGCTTGGTACGTGGGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR CCA 72 bp | TACAGCCAGGAAACCATGGGGTTTGACCTGAAGTCTTaGAAGACTTTCTTGTGCTCAGGGATGATCCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: YSQETMGFDLKS*KTFLCSGMILY Trigger: GTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTCAGGTCAAACCCCATGGTTTCCTGGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCTTAGTGGATTTCAAGTaGCACTCCCTCTTCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: RETVSKTGTGLSSSHRRSLVDFK*HSLFSI Trigger: TATGCTGAAGAGGGAGTGCAACTTGAAATCCACTAA...GGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CAA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTCTGGGTATTGGGGACTaGAACTCAGTCAGATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTASICVCVCSVTSRRICLGIGD*NSVRSS Trigger: TGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAG...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCAGTATTTGGGATTGCTTaGCTGGATACAGTCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVSKAHNRPDVALSAYGSVFGIA*LDTVSK Trigger: CTTGGAGACTGTATCCAGCAAAGCAATCCCAAATAC...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCACAACACAGCATCCATTaGTGTATGTGTGTGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVSKAHNRPDVALSAYGSQHSIH*CMCVLC Trigger: ACAGAGCACACACATACACAAATGGATGCTGTGTTG...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTTCAAAAGCCCACAATAGGCCTGATGTGGCTCTCTCTGCCTATGGGTCACTCCAGTCTTCATTTTaGACAAGCACAAAACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVSKAHNRPDVALSAYGSLQSSF*TSTKLC Trigger: GCAGAGTTTTGTGCTTGTCAAAAATGAAGACTGGAG...TGACCCATAGGCAGAGAGAGCCACATCAGGCCTATTGTGGGCTTTTGAAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCGTCTGTGGCAAGTGCTaGTGCTTGAATGTCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVVCGKC*CLNVLV Trigger: CACCAGGACATTCAAGCACAAGCACTTGCCACAGAC...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR GCA 72 bp | ATGGGGTTTGACCTGAAGTCTTGGAAGACTTTCTTGTaGTCAGGGATGATCCTCTACTCTGGAATCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MGFDLKSWKTFL*SGMILYSGISG Trigger: TCCTGAGATTCCAGAGTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTCAGGTCAAACCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | CAGTTCTTCATGTTATTTTTGAAAACTGGAGCTCACTaGCAGGCTGAACTGGCGGTTAACAAAGCCCGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QFFMLFLKTGAH*QAELAVNKARE Trigger: TTCCCGGGCTTTGTTAACCGCCAGTTCAGCCTGCCAGTGAGCTCCAGTTTTCAAAAATAACATGAAGAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATTTCATAGTCATAGTCATCTTGACATCAAAACCTTTTTCCCAGACAGGGAGCTGTCTCCCCATTaGGGAGTGGAGACCTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTFHSHSHLDIKTFFPDRELSPH*GVETSS Trigger: ACTAGAGGTCTCCACTCCCAAATGGGGAGACAGCTC...CCTGTCTGGGAAAAAGGTTTTGATGTCAAGATGACTATGACTATGAAATGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTTGTGTTTGCTTCTGTTaGTCTCCGCCAAATCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFCVCFC*SPPNPY Trigger: GTAAGGATTTGGCGGAGACAAACAGAAGCAAACACA...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTTGGAACAGAATCATTTaGATCTGGGGCTGTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFWNRII*IWGCSV Trigger: TACTGAACAGCCCCAGATCAAAATGATTCTGTTCCA...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGCTTGTGCTTGAATGTCCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTCATGTTATTTTaGAAAACTGGAGCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: QVLVLECPGVCVCVCVCVFFMLF*KTGAHW Trigger: CCAGTGAGCTCCAGTTTTCAAAAATAACATGAAGAA...CACACACACACACACACACACACACACACCAGGACATTCAAGCACAAGCACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | ATAATAATAATATGGAGCTGTCTCCCCATTTGGGAGTaGAGACCTCTAGTGGGCTTAAAGGCCCAGCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IIIIWSCLPIWE*RPLVGLKAQLL Trigger: TAAAAGCTGGGCCTTTAAGCCCACTAGAGGTCTCCACTCCCAAATGGGGAGACAGCTCCATATTATTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | AAGAATATTGACCATAACGACTTACTAACCTGCTCTTaGAAATATGCCACTAGCCTTGGACAACCTCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KNIDHNDLLTCS*KYATSLGQPPQ Trigger: CTGGGGAGGTTGTCCAAGGCTAGTGGCATATTTCCAAGAGCAGGTTAGTAAGTCGTTATGGTCAATATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTAGGACGTGTGGCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTTGAACATTGTCTTCATTaGTGGGTTAAAGGCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QIRTCGFVGEIVSLGVGFEHCLH*WVKGSL Trigger: CAAAGAGCCTTTAACCCACAAATGAAGACAATGTTC...AAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGCCACACGTCCTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR GCA 72 bp | GTGCCGAATGATTTTTGTTGGTATTTGGGATTGCTTTaGTGGATACAGTCTCCAAGAGTTGTAGTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VPNDFCWYLGLL*WIQSPRVVVFG Trigger: CCCAAACACTACAACTCTTGGAGACTGTATCCAGCAAAGCAATCCCAAATACCAACAAAAATCATTCGGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | GCTAGAAGACCAGAGCTCAGAGAATTTGACTGTAGTTaGGTTCAAGGCTTTATCATGAAAGCTCAGATCATG | + |
|
Preference number: 3 (lower is better) Translates to: ARRPELREFDCS*VQGFIMKAQIM Trigger: CATGATCTGAGCTTTCATGATAAAGCCTTGAACCCAACTACAGTCAAATTCTCTGAGCTCTGGTCTTCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGATCCTCTACTCTGGAATCTCAGGACTAGATAACGCTTCACTACAACTAGGGGACCTCACTGAAGGGTaGTTCATTTATCTTAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: MILYSGISGLDNASLQLGDLTEG*FIYLSY Trigger: ATAGCTAAGATAAATGAACAACCCTTCAGTGAGGTC...CCCTAGTTGTAGTGAAGCGTTATCTAGTCCTGAGATTCCAGAGTAGAGGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR GCA 72 bp | TCTGAGAAACAGAAACTTAGGCCTAGTCTCCCAAATTaGCAGTTTGTAGCCTGTCATAGATTAACCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SEKQKLRPSLPN*QFVACHRLTLS Trigger: ACTAAGGGTTAATCTATGACAGGCTACAAACTGGCAATTTGGGAGACTAGGCCTAAGTTTCTGTTTCTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | CACAATGTATCCATTTGGAACAGAATCATTTTGATCTaGGGCTGTTCAGTATTTGGTGGGAAGGGTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HNVSIWNRIILI*GCSVFGGKGRK Trigger: CTTTCTACCCTTCCCACCAAATACTGAACAGCCCCAGATCAAAATGATTCTGTTCCAAATGGATACATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CCA 72 bp | TCATATGGCTGCACGTGCGTCATCGGAGGTGGGTTTTaGTATGTGGTAAAGAAAGCCTTAATTAAAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SYGCTCVIGGGF*YVVKKALIKKN Trigger: ATTCTTTTTAATTAAGGCTTTCTTTACCACATACCAAAACCCACCTCCGATGACGCACGTGCAGCCATATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCAAAACTCTGCAGATATaGCCAAATGTCCTCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVKTLQI*PNVLMK Trigger: CTTCATGAGGACATTTGGCAATATCTGCAGAGTTTT...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR TCA 72 bp | ATTATAACGCACAGATTTATTCACTCAGCCCATGTTTaGGGAATGGCTAGAAGACCAGAGCTCAGAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: IITHRFIHSAHV*GMARRPELREF Trigger: AAATTCTCTGAGCTCTGGTCTTCTAGCCATTCCTCAAACATGGGCTGAGTGAATAAATCTGTGCGTTATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | ACAAGTTTGTCTGGCTATATAAGCAACAACAAGGCTTaGATGGTCATGTTTATGTTTAACAGTGGGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSLSGYISNNKA*MVMFMFNSGTA Trigger: TGCTGTCCCACTGTTAAACATAAACATGACCATCCAAGCCTTGTTGTTGCTTATATAGCCAGACAAACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTCTGTATAAAGGCCAAAGGTCAATACTaGATGTCTTCCTCAACAGTTCTTCATGTTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCIKAKGQY*MSSSTVLHVIF Trigger: AAAAATAACATGAAGAACTGTTGAGGAAGACATCCAGTATTGACCTTTGGCCTTTATACAGACACACACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR GCA 72 bp | CCACGTACCAAGCAGACATTAGTAAAGTTTAGAAAGTaGCCAAGAGTTGTAAAAATGAAGGATATTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PRTKQTLVKFRK*PRVVKMKDILL Trigger: TAAGAGAATATCCTTCATTTTTACAACTCTTGGGCACTTTCTAAACTTTACTAATGTCTGCTTGGTACGTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR TCA 72 bp | AGGAAACTTGGTAGAAAATTTACTCTTAAAGAAGATTaGGAGAATTTGGAGAGTGGGGACAAGGTTACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RKLGRKFTLKED*ENLESGDKVTK Trigger: TTTAGTAACCTTGTCCCCACTCTCCAAATTCTCTCAATCTTCTTTAAGAGTAAATTTTCTACCAAGTTTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTGGCTGGATGATCCCAGGGAACTaGCCCTTGCCTGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AELPMSFVGSWGCSFAGWMIPGN*PLPGGR Trigger: CCTGCCCCCAGGCAAGGGCCAGTTCCCTGGGATCAT...CCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | ACTGGAACAGGTCTCAGTTCCAGTCACCGGCGGTCCCACGTACCAAGCAGACATGGGTGGGTAGGTGGGTaGAGAGCTGCTCACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTGLSSSHRRSHVPSRHGWVGG*RAAHLG Trigger: CCCCAGGTGAGCAGCTCTCCACCCACCTACCCACCC...ATGTCTGCTTGGTACGTGGGACCGCCGGTGACTGGAACTGAGACCTGTTCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAGAGAAACCCCAGCACTGAGAGGAGAGTCATTGCAAAGGCCCAGAGTCAGGGAACTGGCCCTTaGCTGGGGGCAGGAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGERNPSTERRVIAKAQSQGTGP*LGAGRA Trigger: CGCTCTTCCTGCCCCCAGGCAAGGGCCAGTTCCCTG...ACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR TCA 90 bp | GCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTGGCTGGTTCCATACAAATCGATaGTCCCAGGGAACTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AELPMSFVGSWGCSFAGWFHTNR*SQGTGP Trigger: AGGGCCAGTTCCCTGGGATCATCGATTTGTATGGAA...CCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCGAACTGGCCCTTGCCTaGGGGCAGGAAGAGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLSLPLREKRSESYWLGELALA*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGCAAGGGCCAGTTC...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCATTGCAAAGGCCCAGAGTCCAGTGGGAGCCTTACAAGGAGGCTGAGCGGGATAAGACTCTGGTaGTTGGGTTCCTCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESHCKGPESSGSLTRRLSGIRLW*LGSSSG Trigger: TCCACTGGAGGAACCCAACCACCAGAGTCTTATCCC...GCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CAA 72 bp | GAGGAGAGAGAAACCCCAGCACTGAGAGGAGAGTCATaGCAAAGGCCCAGAGTCCAGTGGGAGCCTTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EERETPALRGES*QRPRVQWEPYK Trigger: CTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCCTTACAAGGAGGCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGAAATGGGATAAGACTCTaGTGGTTGGGTTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WEPYKEAELPMSFVGSWGNGIRL*WLGSSS Trigger: ACTGGAGGAACCCAACCACCAGAGTCTTATCCCATT...TCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGCCTCCTTGTAAGGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGAGAGAAACCCCAGCACTGAGAGGAGAGTCATTGCAAAGGCCCAGAGTGGTCTGTCTTTTCCATaGGCTTGCAGGCGTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGERNPSTERRVIAKAQSGLSFP*ACRRSQ Trigger: CTGTGAACGCCTGCAAGCCCATGGAAAAGACAGACC...ACTCTGGGCCTTTGCAATGACTCTCCTCTCAGTGCTGGGGTTTCTCTCTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | TTTTTACCTGGGTATTGGGGACTTGAACTCAGTCAGATCTTCATGGTTGCCAAGGGAGAGCTGCTCACCTaGGGGCAGGAAGAGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPGYWGLELSQIFMVAKGELLT*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGTGAGCAGCTCTCC...CTTGGCAACCATGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAGGTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CAA 72 bp | GTTTGGGCTTCGAGGCCTCACAGCATTTTACAGGCATaGCCTCTGGTGCCCAGCTTTTTACCTGGGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWASRPHSILQA*PLVPSFLPGYW Trigger: CCAATACCCAGGTAAAAAGCTGGGCACCAGAGGCAATGCCTGTAAAATGCTGTGAGGCCTCGAAGCCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGTCATTGCAAAGGCCCAGAGTCCAGTGGGAGCCTTACAAGGAGGCTGAGCTTTTGGAAGAAAGTTTaGATGCGTTGCCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESHCKGPESSGSLTRRLSFWKKV*MRCQAS Trigger: GGATGCCTGGCAACGCATTCAAACTTTCTTCCAAAA...GCTCAGCCTCCTTGTAAGGCTCCCACTGGACTCTGGGCCTTTGCAATGACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | AACACAGCATCCATTTGTGTATGTGTGTGCTCTGTGACCTCCAGGAGGATCTGTAGCTTAGGAACCGGGTaGGTAGGTGGGTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTASICVCVCSVTSRRICSLGTG*VGGWRA Trigger: AGCTCTCCACCCACCTACCCACCCGGTTCCTAAGCT...ACAGATCCTCCTGGAGGTCACAGAGCACACACATACACAAATGGATGCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR TCA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCATCCAGCTGTGCCCTTaGTTGAGCACGTGGCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: SYENSGFCPWQGIALGMTIQLCP*LSTWLT Trigger: GGTAAGCCACGTGCTCAATCAAGGGCACAGCTGGAT...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGAAATAGAGAAACTGTTTCTAAGACTGGAACAGGTCTCAGTTCCAGTCAGGTGGGTGGAGAGCTaGTCACCTGGGGGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPEIEKLFLRLEQVSVPVRWVES*SPGGRK Trigger: CTTCCTGCCCCCAGGTGAGCAGCTCTCCACCCACCT...GACTGGAACTGAGACCTGTTCCAGTCTTAGAAACAGTTTCTCTATTTCTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR GCA 90 bp | ATGATCCTCTACTCTGGAATCTCAGGACTAGATAACGCTTCACTACAACTAGGGAGCACGGCAAAACCATaGCCAGCCAGAAGGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MILYSGISGLDNASLQLGSTAKP*PARRLA Trigger: AGCCAGCCTTCTGGCTGGGCATGGTTTTGCCGTGCT...CCCTAGTTGTAGTGAAGCGTTATCTAGTCCTGAGATTCCAGAGTAGAGGATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | CTTGAGAGCTGCAAAATACACTCAGATTCAAACGGCCTGTGTTTGCTTCTGTTTAACCGGGTGGGTAGGTaGGTGGAGAGCTGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LESCKIHSDSNGLCLLLFNRVGR*VESCSP Trigger: AGGTGAGCAGCTCTCCACCCACCTACCCACCCGGTT...AAACAGAAGCAAACACAGGCCGTTTGAATCTGAGTGTATTTTGCAGCTCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CAA 72 bp | CTCTGGTGCCCAGCTTTTTACCTGGGTATTGGGGACTaGAACTCAGTCAGATCTTCATGGTTGCCAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWCPAFYLGIGD*NSVRSSWLPSK Trigger: CTTGCTTGGCAACCATGAAGATCTGACTGAGTTCAAGTCCCCAATACCCAGGTAAAAAGCTGGGCACCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCGTGGCTTACCTCCATTaGAGACTGCTTCACCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVLSLPLREKRSESYWLGVAYLH*RLLHPT Trigger: TGTTGGGTGAAGCAGTCTTCAATGGAGGTAAGCCAC...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCGAAAGGTTCTGTGTACAGCCAGCTGGGCCTTTTCCAATaGGATAAGACTCTGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKREVKATGLAKGSVYSQLGLFQ*DKTLVV Trigger: AACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAG...CTGGCTGTACACAGAACCTTTCGCCAAGCCAGTAGCTTTCACTTCTCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | TGGATGACCACAGGTTCTGGGTTCTCATTTCTGAGAAACAGAAACTTAGGCCTAAACAGGAAGGGTCCCTaGGCCTTTTCCAATGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WMTTGSGFSFLRNRNLGLNRKGP*AFSNGI Trigger: TATCCCATTGGAAAAGGCCCAGGGACCCTTCCTGTT...TAGGCCTAAGTTTCTGTTTCTCAGAAATGAGAACCCAGAACCTGTGGTCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CAA 72 bp | TACACTCAGATTCAAACGGCCTGTGTTTGCTTCTGTTaGTCTCCGCCAAATCCTTACCCACCTAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTQIQTACVCFC*SPPNPYPPSFE Trigger: CTCAAAGCTAGGTGGGTAAGGATTTGGCGGAGACAAACAGAAGCAAACACAGGCCGTTTGAATCTGAGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR GCA 90 bp | ATTTGTTGTATGTCTTCGGCAGGTGGGTTCCCTCACAAGCAGAATAAAAGACAGTCTTTTCCATGGGCTTaGAGGCGTTCACAGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: ICCMSSAGGFPHKQNKRQSFPWA*RRSQAI Trigger: TATAGCCTGTGAACGCCTGCAAGCCCATGGAAAAGA...CTGTCTTTTATTCTGCTTGTGAGGGAACCCACCTGCCGAAGACATACAACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCACAGTGACCAGTTTCTaGATAGTAGATTATCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVLSLPLREKRSESYWLGTVTSF*IVDYLG Trigger: CCCCAGATAATCTACTATCCAGAAACTGGTCACTGT...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTTAGCCTACCGCTCAGAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCAGGAGGAAAATAAGGTaGCTCAATACAGTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLSLPLREKRSESYWLGRRKIR*LNTVTS Trigger: ACTGGTCACTGTATTGAGCCACCTTATTTTCCTCCT...GCCAAGCCAGTAGCTTTCACTTCTCTTTTCTCTGAGCGGTAGGCTAAGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CAA 72 bp | GTGTATGTCACCACCGCTGGGCTCCAGTCTTCATTTTaGACAAGCACAAAACTCTGCAGATATTGCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VYVTTAGLQSSF*TSTKLCRYCQM Trigger: CATTTGGCAATATCTGCAGAGTTTTGTGCTTGTCAAAAATGAAGACTGGAGCCCAGCGGTGGTGACATACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CAA 72 bp | TACCGACTGAGCTGTCTCCCAGCACAATGTATCCATTaGGAACAGAATCATTTTGATCTGGGGCTGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRLSCLPAQCIH*EQNHFDLGLFS Trigger: ACTGAACAGCCCCAGATCAAAATGATTCTGTTCCAAATGGATACATTGTGCTGGGAGACAGCTCAGTCGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| 3UTR CAA 72 bp | GCTTTGTTGGAGAAATTGTGTCACTGGGAGTGGGTTTaGAAGTTTCAAAAGCCCACAATAGGCCTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLEKLCHWEWV*KFQKPTIGLMW Trigger: CCACATCAGGCCTATTGTGGGCTTTTGAAACTTCAAAACCCACTCCCAGTGACACAATTTCTCCAACAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR GCA 90 bp | ATGATCCTCTACTCTGGAATCTCAGGACTAGATAACGCTTCACTACAACTAGGGAGTTGTGATCATCCATaGCCACAAGAAACAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MILYSGISGLDNASLQLGSCDHP*PQETGR Trigger: CCTTCCTGTTTCTTGTGGGCATGGATGATCACAACT...CCCTAGTTGTAGTGAAGCGTTATCTAGTCCTGAGATTCCAGAGTAGAGGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAATTTGAAGGAGGGGGATGTGCCCTTTATCTTGATTGGTTAGTTCTAACACGAAGTGTACAGTaGCTATGGGAGGAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEFEGGGCALYLDWLVLTRSVQ*LWEEEN Trigger: ATTTTCCTCCTCCCATAGCCACTGTACACTTCGTGT...TAGAACTAACCAATCAAGATAAAGGGCACATCCCCCTCCTTCAAATTCCCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| 3UTR CAA 72 bp | TCCCAGCACAATGTATCCATTTGGAACAGAATCATTTaGATCTGGGGCTGTTCAGTATTTGGTGGGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQHNVSIWNRII*IWGCSVFGGKG Trigger: ACCCTTCCCACCAAATACTGAACAGCCCCAGATCAAAATGATTCTGTTCCAAATGGATACATTGTGCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222921.2 |
||
| CDS-3UTR TCA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCCAGGCTTTTCACCATTaGGATATTTTTGGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYENSGFCPWQGIALGMTQAFHH*DIFGRK Trigger: CTTTCTTCCAAAAATATCTCAATGGTGAAAAGCCTG...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTGGAAGACTTTCTTGTGCTCAGGGATGATCCTCTACTCTGGAATCTCAATAAGTCCAATATTTaGGCCTTTCACCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVLEDFLVLRDDPLLWNLNKSNI*AFHLRM Trigger: CATCCTCAGGTGAAAGGCCCAAATATTGGACTTATT...GAGATTCCAGAGTAGAGGATCATCCCTGAGCACAAGAAAGTCTTCCAAGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CAA 90 bp | GCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGATGCAGCTTTGCTGGCTGGCCAGGGAACTGGCCCTaGCCTGGGGGCAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AELPMSFVGSWGCSFAGWPGNWP*PGGRKS Trigger: GCTCTTCCTGCCCCCAGGCAAGGGCCAGTTCCCTGG...CCAGCCAGCAAAGCTGCATCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCTTACAAGGAGGCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGAGAAAGTTTGAATGCGTaGCCAGGCATCCAGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WEPYKEAELPMSFVGSWGESLNA*PGIQLC Trigger: GCACAGCTGGATGCCTGGCAACGCATTCAAACTTTC...TCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGCCTCCTTGTAAGGCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCCTTACAAGGAGGCTGAGCTTCCTATGAGCTTCGTAGGGAGCTGGGGAATAAGACTCTGGTGGTaGGGTTCCTCCAGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: WEPYKEAELPMSFVGSWGIRLWW*GSSSGL Trigger: CAATCCACTGGAGGAACCCAACCACCAGAGTCTTAT...TCCCCAGCTCCCTACGAAGCTCATAGGAAGCTCAGCCTCCTTGTAAGGCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS TCA 90 bp | AGGCATCCAGCTGTGCCCTTGATTGAGCACGTGGCTTACCTCCATTaGAGACTGCTTCACCCAACACGAAGTGTACAGTGGCTATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHPAVPLIEHVAYLH*RLLHPTRSVQWLWE Trigger: CTCCCATAGCCACTGTACACTTCGTGTTGGGTGAAGCAGTCTTCAATGGAGGTAAGCCACGTGCTCAATCAAGGGCACAGCTGGATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS CCA 90 bp | ATCCATGCCCACAAGAAACAGGAAGGGTCCCTGGGCCTTTTCCAATaGGATAAGACTCTGGTGGTTGGGTTCCTCCAGTGGATTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHAHKKQEGSLGLFQ*DKTLVVGFLQWIVP Trigger: TGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAGGGACCCTTCCTGTTTCTTGTGGGCATGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS CCA 90 bp | AACAGGAAGGGTCCCTGGGCCTTTTCCAATGGGATAAGACTCTGGTaGTTGGGTTCCTCCAGTGGATTGTTCCACATATCCCTCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: NRKGPWAFSNGIRLW*LGSSSGLFHISLKS Trigger: GGATTTGAGGGATATGTGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAGGGACCCTTCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
||
| CDS-3UTR CAA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCCATCCAGCTGTGCCCTaGATTGAGCACGTGGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SYENSGFCPWQGIALGMTHPAVP*IEHVAY Trigger: GTAAGCCACGTGCTCAATCAAGGGCACAGCTGGATG...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS TCA 90 bp | TTGGAAGAAAGTTTGAATGCGTTGCCAGGCATCCAGCTGTGCCCTTaGTTGAGCACGTGGCTTACCTCCATTGAAGACTGCTTCACCCAA | + |
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Preference number: 5 (lower is better) Translates to: LEESLNALPGIQLCP*LSTWLTSIEDCFTQ Trigger: TTGGGTGAAGCAGTCTTCAATGGAGGTAAGCCACGTGCTCAATCAAGGGCACAGCTGGATGCCTGGCAACGCATTCAAACTTTCTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 90 bp | AATAAGCCAGGGCAAGCACGGCAAAACCATGCCCAGCCAGAAGGCTaGCTCTATGTTCACATAAGCCACCGATACTTCCATACAAATCGA | + |
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Preference number: 5 (lower is better) Translates to: NKPGQARQNHAQPEG*LYVHISHRYFHTNR Trigger: TCGATTTGTATGGAAGTATCGGTGGCTTATGTGAACATAGAGCCAGCCTTCTGGCTGGGCATGGTTTTGCCGTGCTTGCCCTGGCTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 90 bp | AGAAACAGGAAGGGTCCCTGGGCCTTTTCCAATGGGATAAGACTCTaGTGGTTGGGTTCCTCCAGTGGATTGTTCCACATATCCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RNRKGPWAFSNGIRL*WLGSSSGLFHISLK Trigger: TTTGAGGGATATGTGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAGGGACCCTTCCTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCACAGTGGCTGTGATGTaGTCCTTCAGGAAAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SYENSGFCPWQGIALGMTTVAVM*SFRKAA Trigger: GGCTGCTTTCCTGAAGGACAACATCACAGCCACTGT...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCCACAGATCAGCACCTTaGGAGACACCAATAAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SYENSGFCPWQGIALGMTHRSAP*ETPISP Trigger: TGGACTTATTGGTGTCTCCAAAGGTGCTGATCTGTG...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | GAGAAAAGAGAAGTGAAAGCTACTGGCTTGGCGAAAGGTTCTGTGTACAGCCAGGGTTCCTCCAGTGGATaGTTCCACATATCCCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: EKREVKATGLAKGSVYSQGSSSG*FHISLK Trigger: TTTGAGGGATATGTGGAACAATCCACTGGAGGAACC...CTGGCTGTACACAGAACCTTTCGCCAAGCCAGTAGCTTTCACTTCTCTTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TGGATGACCACAGGTTCTGGGTTCTCATTTCTGAGAAACAGAAACTTAGGCCTACGTGGCTTACCTCCATaGAAGACTGCTTCACCCAAC | + |
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Preference number: 5 (lower is better) Translates to: WMTTGSGFSFLRNRNLGLRGLPP*KTASPN Trigger: GTTGGGTGAAGCAGTCTTCAATGGAGGTAAGCCACG...TAGGCCTAAGTTTCTGTTTCTCAGAAATGAGAACCCAGAACCTGTGGTCATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS TCA 90 bp | GCACCTTTGGAGACACCAATAAGTCCAATATTTGGGCCTTTCACCTaGGGATGGCGTAGCATCAAAGCTAAGGCTTCTTCAAAGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: APLETPISPIFGPFT*GWRSIKAKASSKYS Trigger: GGAGTACTTTGAAGAAGCCTTAGCTTTGATGCTACGCCATCCTCAGGTGAAAGGCCCAAATATTGGACTTATTGGTGTCTCCAAAGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 90 bp | ACCCAACACGAAGTGTACAGTGGCTATGGGAGGAGGAAAATAAGGTaGCTCAATACAGTGACCAGTTTCTGGATAGTAGATTATCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: TQHEVYSGYGRRKIR*LNTVTSFWIVDYLG Trigger: CCCCAGATAATCTACTATCCAGAAACTGGTCACTGTATTGAGCCACCTTATTTTCCTCCTCCCATAGCCACTGTACACTTCGTGTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCGGCCTGACTTATTTTTaGTTTGATCACACCCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SYENSGFCPWQGIALGMTGLTYF*FDHTQA Trigger: AGCTTGGGTGTGATCAAACAAAAAATAAGTCAGGCC...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGGAATTTGAAGGAGGGGGATGTGCCCTTTATCTTGATTGGTTAGTTCTAAGAGGTACTAATGTGTaGGCCACACAGGCATTTATA | + |
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Preference number: 5 (lower is better) Translates to: SGEFEGGGCALYLDWLVLRGTNV*ATQAFI Trigger: TATAAATGCCTGTGTGGCCAACACATTAGTACCTCT...TAGAACTAACCAATCAAGATAAAGGGCACATCCCCCTCCTTCAAATTCCCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | ATGATCCTCTACTCTGGAATCTCAGGACTAGATAACGCTTCACTACAACTAGGGTTTTTGGAAGAAAGTTaGAATGCGTTGCCAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: MILYSGISGLDNASLQLGFLEES*NALPGI Trigger: GATGCCTGGCAACGCATTCAAACTTTCTTCCAAAAA...CCCTAGTTGTAGTGAAGCGTTATCTAGTCCTGAGATTCCAGAGTAGAGGATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS-3UTR CAA 90 bp | TCCTATGAAAACTCTGGGTTTTGTCCTTGGCAAGGCATAGCACTAGGCATGACCGCAGGCTTTTCACCATaGAGATATTTTTGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SYENSGFCPWQGIALGMTAGFSP*RYFWKK Trigger: TTTCTTCCAAAAATATCTCAATGGTGAAAAGCCTGC...GGTCATGCCTAGTGCTATGCCTTGCCAAGGACAAAACCCAGAGTTTTCATAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS TCA 72 bp | GTTCACATAAGCCACCGATACTTCCATACAAATCGATaGTCCCAGGGAACTGGCCCTTGCCTGGGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VHISHRYFHTNR*SQGTGPCLGAG Trigger: TCCTGCCCCCAGGCAAGGGCCAGTTCCCTGGGATCATCGATTTGTATGGAAGTATCGGTGGCTTATGTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 72 bp | GGGCAAGCACGGCAAAACCATGCCCAGCCAGAAGGCTaGCTCTATGTTCACATAAGCCACCGATACTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GQARQNHAQPEG*LYVHISHRYFH Trigger: ATGGAAGTATCGGTGGCTTATGTGAACATAGAGCCAGCCTTCTGGCTGGGCATGGTTTTGCCGTGCTTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 72 bp | CACAAGAAACAGGAAGGGTCCCTGGGCCTTTTCCAATaGGATAAGACTCTGGTGGTTGGGTTCCTCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HKKQEGSLGLFQ*DKTLVVGFLQW Trigger: CCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAGGGACCCTTCCTGTTTCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS TCA 72 bp | AGTTTGAATGCGTTGCCAGGCATCCAGCTGTGCCCTTaGTTGAGCACGTGGCTTACCTCCATTGAAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SLNALPGIQLCP*LSTWLTSIEDC Trigger: GCAGTCTTCAATGGAGGTAAGCCACGTGCTCAATCAAGGGCACAGCTGGATGCCTGGCAACGCATTCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CAA 90 bp | AGGAAGGGTCCCTGGGCCTTTTCCAATGGGATAAGACTCTGGTGGTaGGGTTCCTCCAGTGGATTGTTCCACATATCCCTCAAATCCATA | + |
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Preference number: 6 (lower is better) Translates to: RKGPWAFSNGIRLWW*GSSSGLFHISLKSI Trigger: TATGGATTTGAGGGATATGTGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTGGAAAAGGCCCAGGGACCCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CAA 72 bp | GGGATAAGACTCTGGTGGTTGGGTTCCTCCAGTGGATaGTTCCACATATCCCTCAAATCCATAAGGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GIRLWWLGSSSG*FHISLKSIRPD Trigger: GTCAGGCCTTATGGATTTGAGGGATATGTGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CCA 72 bp | CAATGGGATAAGACTCTGGTGGTTGGGTTCCTCCAGTaGATTGTTCCACATATCCCTCAAATCCATAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QWDKTLVVGFLQ*IVPHIPQIHKA Trigger: GGCCTTATGGATTTGAGGGATATGTGGAACAATCCACTGGAGGAACCCAACCACCAGAGTCTTATCCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CAA 72 bp | AGGAAAGCAGCCATCGAGAGGCACAGATCAGCACCTTaGGAGACACCAATAAGTCCAATATTTGGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RKAAIERHRSAP*ETPISPIFGPF Trigger: GAAAGGCCCAAATATTGGACTTATTGGTGTCTCCAAAGGTGCTGATCTGTGCCTCTCGATGGCTGCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS CAA 90 bp | TTACAGTTTGCTGTGCCTGGCAGGCTTTTCACCATTGAGATATTTTaGGAAGAAAGTTTGAATGCGTTGCCAGGCATCCAGCTGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LQFAVPGRLFTIEIF*EESLNALPGIQLCP Trigger: AGGGCACAGCTGGATGCCTGGCAACGCATTCAAACTTTCTTCCAAAAATATCTCAATGGTGAAAAGCCTGCCAGGCACAGCAAACTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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| CDS TCA 72 bp | GAGACACCAATAAGTCCAATATTTGGGCCTTTCACCTaGGGATGGCGTAGCATCAAAGCTAAGGCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ETPISPIFGPFT*GWRSIKAKASS Trigger: TGAAGAAGCCTTAGCTTTGATGCTACGCCATCCTCAGGTGAAAGGCCCAAATATTGGACTTATTGGTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056822.4 |
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