Pregenerated sensors for ACOT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042540Ensembl transcript IDs: ENSMUST00000046422.11, ENSMUST00000072505.5
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CAGCAATGTCACCAGCAATGTCACTACTCAAAGAAAATCATAGTTTaGCTGGGCTTGGCCTCTTGTCCCCACTCAAATGTTTATGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: QQCHQQCHYSKKIIV*LGLASCPHSNVYGK Trigger: TTTTCCATAAACATTTGAGTGGGGACAAGAGGCCAAGCCCAGCAAAACTATGATTTTCTTTGAGTAGTGACATTGCTGGTGACATTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072505.5 |
||
| CDS-3UTR CCA 90 bp | GGCATGAGCCCTAGGCTCCCCTCCAAGGAGGATAGGCTTATCAAAATAGCTGTGAGCAGCTGTGGCCCGTaGGCTCCAGGCTTACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GMSPRLPSKEDRLIKIAVSSCGP*APGLLL Trigger: CAACAGTAAGCCTGGAGCCCACGGGCCACAGCTGCT...CACAGCTATTTTGATAAGCCTATCCTCCTTGGAGGGGAGCCTAGGGCTCATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072505.5 |
||
| CDS-3UTR CCA 90 bp | CTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTCAAAAGCAGCTGTGGCCCGTaGGCTCCAGGCTTACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LILRGTAPAMSPAMSLLKSSCGP*APGLLL Trigger: CAACAGTAAGCCTGGAGCCCACGGGCCACAGCTGCT...TTTGAGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CCA 90 bp | TATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTGCGCCTGCAGGCGTTTaGAGGCCTCTCTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPNSQGNSTSNVTSNVTTAPAGV*RPLWHR Trigger: TCTATGCCAGAGAGGCCTCCAAACGCCTGCAGGCGC...AGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CCA 90 bp | TATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTAGAGTTCAGCCCCTTTaGAAATCCCTAGCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YPNSQGNSTSNVTSNVTTRVQPL*KSLAGQ Trigger: TTGGCCTGCTAGGGATTTCCAAAGGGGCTGAACTCT...AGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTCAAAGAAAAGAGTTCAGCCCCTTTaGAAATCCCTAGCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSGEQHQQCHQQCHYSKKRVQPL*KSLAGQ Trigger: TTGGCCTGCTAGGGATTTCCAAAGGGGCTGAACTCT...TTTCTTTGAGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR TCA 90 bp | AGAAAACAATGCATATATATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCACATCTTTGGTCACCTTaGTCCTTTCTAGGTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQCIYILILRGTAPAMSHLWSP*SFLGAC Trigger: GCATGCACCTAGAAAGGATCAAGGTGACCAAAGATG...TGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATATATATGCATTGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||
| CDS-3UTR CAA 90 bp | CCTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTCAAGCTGGGCTTGGCCTCTaGTCCCCACTCAAATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PNSQGNSTSNVTSNVTTQAGLGL*SPLKCL Trigger: TAAACATTTGAGTGGGGACAAGAGGCCAAGCCCAGC...TTGAGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||
| CDS-3UTR CAA 90 bp | AATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTCAAAGAATAGTTTTGCTGGGCTaGGCCTCTTGTCCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSQGNSTSNVTSNVTTQRIVLLG*ASCPHS Trigger: TGAGTGGGGACAAGAGGCCAAGCCCAGCAAAACTAT...TCTTTGAGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||
| CDS CCA 90 bp | AACAGGAAGGCCGTGTCAGACCTTTCCAAGGGGATGAGGCTCTTCTaGTCTGGAGCTTCTAGAGGGACATTCAGGATATCTATAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: NRKAVSDLSKGMRLF*SGASRGTFRISIIS Trigger: AGATATTATAGATATCCTGAATGTCCCTCTAGAAGCTCCAGACCAGAAGAGCCTCATCCCCTTGGAAAGGTCTGACACGGCCTTCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||
| CDS-3UTR CAA 90 bp | AAACAATGCATATATATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAGAGAGTTCAGCCCCTTaGGAAATCCCTAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQCIYILILRGTAPAMSPESSAP*EIPSRP Trigger: TGGCCTGCTAGGGATTTCCAAAGGGGCTGAACTCTC...TGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATATATATGCATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAACAATGCATATATATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCAGAGAGTTCAGCCCCTTaGGAAATCCCTAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKQCIYILILRGTAPAMSESSAP*EIPSRP Trigger: TGGCCTGCTAGGGATTTCCAAAGGGGCTGAACTCTC...TGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATATATATGCATTGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CAA 90 bp | AATTCTCAGGGGAACAGCACCAGCAATGTCACCAGCAATGTCACTACTCAAAGATCTTTAAACCCATCTTaGGTCACCTTGATCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSQGNSTSNVTSNVTTQRSLNPS*VTLILS Trigger: AGAAAGGATCAAGGTGACCAAAGATGGGTTTAAAGA...TCTTTGAGTAGTGACATTGCTGGTGACATTGCTGGTGCTGTTCCCCTGAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||
| CDS-3UTR CAA 90 bp | AAACAATGCATATATATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCACCAAATGTTGAAATAACGTaGACCGTGGCGCCATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: KQCIYILILRGTAPAMSPNVEIT*TVAPLI Trigger: AATCAATGGCGCCACGGTCAACGTTATTTCAACATT...TGGTGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATATATATGCATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS-3UTR CAA 90 bp | AGAAAACAATGCATATATATCCTAATTCTCAGGGGAACAGCACCAGCAATGTCAAATGTTGAAATAACGTaGACCGTGGCGCCATTGATT | + |
|
Preference number: 5 (lower is better) Translates to: RKQCIYILILRGTAPAMSNVEIT*TVAPLI Trigger: AATCAATGGCGCCACGGTCAACGTTATTTCAACATT...TGACATTGCTGGTGCTGTTCCCCTGAGAATTAGGATATATATGCATTGTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046422.11 ENSMUST00000072505.5 |
||
| CDS CAA 72 bp | ATATCTATAATATCTTTAAACCCATCTTTGGTCACCTaGATCCTTTCTAGGTGCATGCCCAAACCAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ISIISLNPSLVT*ILSRCMPKPGR Trigger: TCTGCCTGGTTTGGGCATGCACCTAGAAAGGATCAAGGTGACCAAAGATGGGTTTAAAGATATTATAGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046422.11 |
||