Pregenerated sensors for ACOT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052392Ensembl transcript IDs: ENSMUST00000021652.5, ENSMUST00000128162.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCGAGTAAGGGGACTAAAGCTTGTGTCCCTGTGCCATTGGAAGTaGGAAGTCTTCCTCACAAGCTGCTGCTCCTGTGAGTGTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SRVRGLKLVSLCHWK*EVFLTSCCSCECQA Trigger: GGCCTGACACTCACAGGAGCAGCAGCTTGTGAGGAAGACTTCTCACTTCCAATGGCACAGGGACACAAGCTTTAGTCCCCTTACTCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | CAGGCTCCCTCCTCTCACATGACTCCAGCTTCTGTCAAGTTGACATaGAATGAGGCAGCAGCAGCTGCAGCCACTGTCTTTAAAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QAPSSHMTPASVKLT*NEAAAAAATVFKAE Trigger: CTCAGCTTTAAAGACAGTGGCTGCAGCTGCTGCTGCCTCATTTCATGTCAACTTGACAGAAGCTGGAGTCATGTGAGAGGAGGGAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 90 bp | GCCTTGAGCACTGAGGGTGGGACTCTTGGAGATGGTGAAGACATGTaGAATCCTGTGGTTTCCTCTCATTCAGCACAGGAAGGAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: ALSTEGGTLGDGEDM*NPVVSSHSAQEGES Trigger: TGACTCTCCTTCCTGTGCTGAATGAGAGGAAACCACAGGATTCCACATGTCTTCACCATCTCCAAGAGTCCCACCCTCAGTGCTCAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 90 bp | GACTCCAGGAGACCAGTTTCCATGAAACCTTTTGCCTCAGGATTGTaGCTAAGCTTTTGGACTTGTCATGCAGACTCCACTGGAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: DSRRPVSMKPFASGL*LSFWTCHADSTGVA Trigger: AGCCACTCCAGTGGAGTCTGCATGACAAGTCCAAAAGCTTAGCCACAATCCTGAGGCAAAAGGTTTCATGGAAACTGGTCTCCTGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 90 bp | TCACAAGCTGCTGCTCCTGTGAGTGTCAGGCCTTCCCTGCCAGAATaGATTGAAACTCTTAAAGCCATGAGTCTTTCAAATTGTTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: SQAAAPVSVRPSLPE*IETLKAMSLSNCSK Trigger: CTTAGAACAATTTGAAAGACTCATGGCTTTAAGAGTTTCAATCCATTCTGGCAGGGAAGGCCTGACACTCACAGGAGCAGCAGCTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | GTGTCAGGCCTTCCCTGCCAGAATGGATTGAAACTCTTAAAGCCATaGGTCTTTCAAATTGTTCTAAGTGGTGATTTGTCACCAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: VSGLPCQNGLKLLKP*VFQIVLSGDLSPRG Trigger: GCCTCTTGGTGACAAATCACCACTTAGAACAATTTGAAAGACTCATGGCTTTAAGAGTTTCAATCCATTCTGGCAGGGAAGGCCTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | GTGGTTTCCTCTCATTCAGCACAGGAAGGAGAGTCATCTATGCCATaGAGACAAACATTTTTGGTGTCTGTTACAGTAGGAAAGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: VVSSHSAQEGESSMP*RQTFLVSVTVGKAE Trigger: TTCTGCCTTTCCTACTGTAACAGACACCAAAAATGTTTGTCTTCATGGCATAGATGACTCTCCTTCCTGTGCTGAATGAGAGGAAACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | GCAATGCCTGATTTCTTTCACTATCAACACTGGAGGCATTTCATCTaGATGAGTAGCATTCTTATGAAATTCCAAGCCCAAGGTCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: AMPDFFHYQHWRHFI*MSSILMKFQAQGRL Trigger: GAGCCGACCTTGGGCTTGGAATTTCATAAGAATGCTACTCATTCAGATGAAATGCCTCCAGTGTTGATAGTGAAAGAAATCAGGCATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 90 bp | AGCCCAAGGTCGGCTCATCAATTGCCTAGGATATTGAGACACCAATaGAGGCCAGGAAGCAATGTTCAATCTAACTTAACTATTTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SPRSAHQLPRILRHQ*RPGSNVQSNLTICQ Trigger: TTGACAAATAGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCTCAATATCCTAGGCAATTGATGAGCCGACCTTGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | ACTAGCCCTGAGATTTCTAGCTCTTATCCAGTAAACTGCAATGCCTaGTTTCTTTCACTATCAACACTGGAGGCATTTCATCTGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: TSPEISSSYPVNCNA*FLSLSTLEAFHLNE Trigger: CTCATTCAGATGAAATGCCTCCAGTGTTGATAGTGAAAGAAATCAGGCATTGCAGTTTACTGGATAAGAGCTAGAAATCTCAGGGCTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR GCA 90 bp | GACAATGTAAACCAGTTTCTTCATGGGTTTAGTTTTATCAAATTCTaGTTAATTATCCCCAGAGGTGTTGCAAGAGTCTTGACTCACCAA | + |
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Preference number: 1 (lower is better) Translates to: DNVNQFLHGFSFIKF*LIIPRGVARVLTHQ Trigger: TTGGTGAGTCAAGACTCTTGCAACACCTCTGGGGATAATTAAGCAGAATTTGATAAAACTAAACCCATGAAGAAACTGGTTTACATTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | ATTGAAACTCTTAAAGCCATGAGTCTTTCAAATTGTTCTAAGTGGTaGTTTGTCACCAAGAGGCCAAAGCAATCTTACAGACAAGCATTA | + |
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Preference number: 1 (lower is better) Translates to: IETLKAMSLSNCSKW*FVTKRPKQSYRQAL Trigger: TAATGCTTGTCTGTAAGATTGCTTTGGCCTCTTGGTGACAAATCACCACTTAGAACAATTTGAAAGACTCATGGCTTTAAGAGTTTCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 90 bp | AGTCTGCCATACATGACTGTAATGAGAATTCTAAGTTTACTTTGTTaGACTAGCCCTGAGATTTCTAGCTCTTATCCAGTAAACTGCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLPYMTVMRILSLLC*TSPEISSSYPVNCN Trigger: ATTGCAGTTTACTGGATAAGAGCTAGAAATCTCAGGGCTAGTTCAACAAAGTAAACTTAGAATTCTCATTACAGTCATGTATGGCAGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CATCCTTACACACAGGGGCAATCACTGGAACACATGCTAGGGAGAACTGACTCCCAGGATGGCCAGAACTaGGGTCCTGTCCCCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HPYTQGQSLEHMLGRTDSQDGQN*GPVPKS Trigger: GCTTTTGGGGACAGGACCTCAGTTCTGGCCATCCTG...GGAGTCAGTTCTCCCTAGCATGTGTTCCAGTGATTGCCCCTGTGTGTAAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCACTCCCTCCTCTCACATaGCTCCAGCTTCTGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPLPPLT*LQLLSS Trigger: ACTTGACAGAAGCTGGAGTCATGTGAGAGGAGGGAG...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGAATGTTTGCAGGCTGGTaGGATGGCTCAGCAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGMFAGW*DGSAGK Trigger: CTTACCTGCTGAGCCATCTCACCAGCCTGCAAACAT...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGATGGCAAGTTCCAGGATaGCCAGAACTGAGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGWQVPG*PELRSC Trigger: ACAGGACCTCAGTTCTGGCCATCCTGGAACTTGCCA...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCACATGCTAGGGAGAACTaGCTCCCAGAAATTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPHAREN*LPEIVL Trigger: GAGCACAATTTCTGGGAGTCAGTTCTCCCTAGCATG...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGACTCTTCCAAAGGTCCTaGGTTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGLFQRS*VQFPAT Trigger: GGTTGCTGGGAATTGAACTCAGGACCTTTGGAAGAG...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR GCA 90 bp | CATCCTTACACACAGGGGCAATCACTGGAACACATGCTAGGGAGAACTGACTCCATATTCAGGTGTGTGTaGACACACATCAGGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HPYTQGQSLEHMLGRTDSIFRCV*THIRLP Trigger: AGGGAGCCTGATGTGTGTGCACACACACCTGAATAT...GGAGTCAGTTCTCCCTAGCATGTGTTCCAGTGATTGCCCCTGTGTGTAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGAACTCAGAGATTCACCTaGATCTGCCTCCAGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGTQRFT*ICLQSV Trigger: AACACTCTGGAGGCAGATGCAGGTGAATCTCTGAGT...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | CTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAAGAAAATCTCCCCAGCCTCAGTACAGCTaGAGCAGGAGACCACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCNRERGSVRCSKPRKSPQPQYS*SRRPPL Trigger: CAGAGGTGGTCTCCTGCTCCAGCTGTACTGAGGCTG...GGGAGATTTTCTTGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGAAGTCCTGGTCTACCATaGAGTGAGAAGTCTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGSPGLP*SEKSIW Trigger: CCAAATAGACTTCTCACTTCATGGTAGACCAGGACT...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGACCTTCCCTGCCAGAATaGATTGAAACTCTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGPSLPE*IETLKA Trigger: GGCTTTAAGAGTTTCAATCCATTCTGGCAGGGAAGG...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGAAGCTGCAACTACCACTaGAATGCTGAACTTAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGSCNYH*NAELRR Trigger: TCTTCTAAGTTCAGCATTTCAGTGGTAGTTGCAGCT...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGAACACACAAACACATATaGCCAAATTCTACAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGTHKHI*PNSTAS Trigger: GGAAGCTGTAGAATTTGGGCATATGTGTTTGTGTGT...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATACAGACAGACAGACAGAGATCAGTTAGGGGACACTGTAATGTAGGAAAGCAGACAAGCATTACCTaGCTGGCCACTAAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: EIQTDRQRSVRGHCNVGKQTSIT*LATKVL Trigger: CAGCACTTTAGTGGCCAGGCAGGTAATGCTTGTCTG...CTTTCCTACATTACAGTGTCCCCTAACTGATCTCTGTCTGTCTGTCTGTATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAACCAGCTTCCTTTACATaGCAAGTTCCAGGATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKPASFT*QVPGWP Trigger: TGGCCATCCTGGAACTTGCCATGTAAAGGAAGCTGG...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAACCAGCAACCACATGGTaGCTCACAAGCACCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKPATTW*LTSTHN Trigger: ATTATGGGTGCTTGTGAGCCACCATGTGGTTGCTGG...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAACAGCTTCTGTCAAGTTaGCATGAAATGAGGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKQLLSS*HEMRQQ Trigger: CTGCTGCCTCATTTCATGTCAACTTGACAGAAGCTG...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCAGTATTTCTTGCAAAATaGGACAAAGGAGCATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPVFLAK*DKGACR Trigger: TCTACATGCTCCTTTGTCTCATTTTGCAAGAAATAC...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCCAGAGCCTTGAGCACTaGGGGTGGGACTCTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LTHQTVILALETFLGNQTQSLEH*GWDSWR Trigger: TCTCCAAGAGTCCCACCCTCAGTGCTCAAGGCTCTG...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAACCAGAAATTGTGCTCTaGTGGCATACAACACACACA | + |
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Preference number: 2 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKPEIVL*WHTTHT Trigger: TGTGTGTGTTGTATGCCATCAGAGCACAATTTCTGG...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR TCA 90 bp | AGACACCAATGGAGGCCAGGAAGCAATGTTCAATCTAACTTAACTATTTGTCAACTGTGTAGCCCTGGCTaGCCTGGAACTTTCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: RHQWRPGSNVQSNLTICQLCSPG*PGTFSV Trigger: TACAGAGAAAGTTCCAGGTCAGCCAGGGCTACACAG...TTGACAAATAGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR CCA 90 bp | AGACACCAATGGAGGCCAGGAAGCAATGTTCAATCTAACTTAACTATTTGTCAATCGAGGAAGACTCTCTaGCTCCAGCCTACCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RHQWRPGSNVQSNLTICQSRKTL*LQPTSF Trigger: GAAAGAGGTAGGCTGGAGCCAGAGAGTCTTCCTCGA...TTGACAAATAGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CAA 90 bp | TATGAAATTCCAAGCCCAAGGTCGGCTCATCAATTGCCTAGGATATaGAGACACCAATGGAGGCCAGGAAGCAATGTTCAATCTAACTTA | + |
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Preference number: 2 (lower is better) Translates to: YEIPSPRSAHQLPRI*RHQWRPGSNVQSNL Trigger: TAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCTCAATATCCTAGGCAATTGATGAGCCGACCTTGGGCTTGGAATTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCAGGATCACCTATCAAAACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTCCCAGAAATTGTaGTCTGATGGCATACAACAC | + |
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Preference number: 2 (lower is better) Translates to: FQDHLSKPLCVCVCVCVCDSQKL*SDGIQH Trigger: GTGTTGTATGCCATCAGAGCACAATTTCTGGGAGTC...ACACACACACACACACACACACACACACAAAGGTTTTGATAGGTGATCCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAGATCCTCCTGCCTCTaGCTCCCGAGTAAGGGGACTAAAGCTTGTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQRSSCL*LPSKGTKACVP Trigger: AGGGACACAAGCTTTAGTCCCCTTACTCGGGAGGCAGAGGCAGGAGGATCTCTGAGTTCGAGGCCAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 72 bp | TTTGGACTTGTCATGCAGACTCCACTGGAGTGGCTGTaGCATATAGCAACTGTCAGGCTAGCCAGGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FGLVMQTPLEWL*HIATVRLARAV Trigger: CACAGCCCTGGCTAGCCTGACAGTTGCTATATGCCACAGCCACTCCAGTGGAGTCTGCATGACAAGTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | AGGGGACTAAAGCTTGTGTCCCTGTGCCATTGGAAGTaGGAAGTCTTCCTCACAAGCTGCTGCTCCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RGLKLVSLCHWK*EVFLTSCCSCE Trigger: CTCACAGGAGCAGCAGCTTGTGAGGAAGACTTCTCACTTCCAATGGCACAGGGACACAAGCTTTAGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR GCA 72 bp | CAAGAGGCCAAAGCAATCTTACAGACAAGCATTACCTaGCTGGCCACTAAAGTGCTGCTGAGATGGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: QEAKAILQTSIT*LATKVLLRWRH Trigger: GTGGCGCCATCTCAGCAGCACTTTAGTGGCCAGGCAGGTAATGCTTGTCTGTAAGATTGCTTTGGCCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAAGCACCCATAATGAGATCTaGCGCCCTCTTCTGGTGTGTCTGAAGTCAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTSTHNEI*RPLLVCLKSAT Trigger: TGTAGCTGACTTCAGACACACCAGAAGAGGGCGTCAGATCTCATTATGGGTGCTTGTGAGCCACCATGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | GAAGTGAGAAGTCTTCCTCACAAGCTGCTGCTCCTGTaGGTGTCAGGCCTTCCCTGCCAGAATGGATTGAAA | + |
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Preference number: 3 (lower is better) Translates to: EVRSLPHKLLLL*VSGLPCQNGLK Trigger: TTTCAATCCATTCTGGCAGGGAAGGCCTGACACTCACAGGAGCAGCAGCTTGTGAGGAAGACTTCTCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 72 bp | ACAATCCCTGTGAGTTCAAGGCCAGCTTCCTTTACATaGCAAGTTCCAGGATGGCCAGAACTGAGGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: TIPVSSRPASFT*QVPGWPELRSC Trigger: ACAGGACCTCAGTTCTGGCCATCCTGGAACTTGCCATGTAAAGGAAGCTGGCCTTGAACTCACAGGGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | CTGTCCTGGAACTTACTCTACAGACTAGACTGGCCTTaGACTCAGAGATTCACCTGCATCTGCCTCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LSWNLLYRLDWP*TQRFTCICLQS Trigger: ACTCTGGAGGCAGATGCAGGTGAATCTCTGAGTTCAAGGCCAGTCTAGTCTGTAGAGTAAGTTCCAGGACAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR CCA 72 bp | ACTGAGGGTGGGACTCTTGGAGATGGTGAAGACATGTaGAATCCTGTGGTTTCCTCTCATTCAGCACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: TEGGTLGDGEDM*NPVVSSHSAQE Trigger: TTCCTGTGCTGAATGAGAGGAAACCACAGGATTCCACATGTCTTCACCATCTCCAAGAGTCCCACCCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | TCGAGGAAGACTCTCTGGCTCCAGCCTACCTCTTTCTaGGTCCTGGTCTACCATGAAGTGAGAAGTCTATTT | + |
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Preference number: 3 (lower is better) Translates to: SRKTLWLQPTSF*VLVYHEVRSLF Trigger: AAATAGACTTCTCACTTCATGGTAGACCAGGACTCAGAAAGAGGTAGGCTGGAGCCAGAGAGTCTTCCTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| 3UTR TCA 72 bp | CAAGCCCAAGGTCGGCTCATCAATTGCCTAGGATATTaGGACACCAATGGAGGCCAGGAAGCAATGTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QAQGRLINCLGY*DTNGGQEAMFN Trigger: ATTGAACATTGCTTCCTGGCCTCCATTGGTGTCTCAATATCCTAGGCAATTGATGAGCCGACCTTGGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR GCA 72 bp | GAACACATGCTAGGGAGAACTGACTCCCAGAAATTGTaGTCTGATGGCATACAACACACACAGACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: EHMLGRTDSQKL*SDGIQHTQTHT Trigger: TGTGTGTGTCTGTGTGTGTTGTATGCCATCAGAGCACAATTTCTGGGAGTCAGTTCTCCCTAGCATGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CCA 72 bp | GCTGCTCCTGTGAGTGTCAGGCCTTCCCTGCCAGAATaGATTGAAACTCTTAAAGCCATGAGTCTTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AAPVSVRPSLPE*IETLKAMSLSN Trigger: ATTTGAAAGACTCATGGCTTTAAGAGTTTCAATCCATTCTGGCAGGGAAGGCCTGACACTCACAGGAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGATTTTTGGTTGTTGTTTaGTGTGTGTGTAAGGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGFLVVV*CVCKVH Trigger: GTGTACCTTACACACACACAAAACAACAACCAAAAA...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR-3UTR CAA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAATCTGCCTCCAGAGTGTaGAGATTAAAGGTGTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKSASRV*RLKVCT Trigger: AGTGCACACCTTTAATCTCAACACTCTGGAGGCAGA...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR GCA 72 bp | CAAAGACTCCAGGAGACCAGTTTCCATGAAACCTTTTaGCTCAGGATTGTGGCTAAGCTTTTGGACTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QRLQETSFHETF*LRIVAKLLDLS Trigger: TGACAAGTCCAAAAGCTTAGCCACAATCCTGAGGCAAAAGGTTTCATGGAAACTGGTCTCCTGGAGTCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CCA 72 bp | TCGGCTCATCAATTGCCTAGGATATTGAGACACCAATaGAGGCCAGGAAGCAATGTTCAATCTAACTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: SAHQLPRILRHQ*RPGSNVQSNLT Trigger: AGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCTCAATATCCTAGGCAATTGATGAGCCGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR GCA 72 bp | TTTCCTCTCATTCAGCACAGGAAGGAGAGTCATCTATaGCATGAAGACAAACATTTTTGGTGTCTGTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: FPLIQHRKESHL*HEDKHFWCLLQ Trigger: CTGTAACAGACACCAAAAATGTTTGTCTTCATGGCATAGATGACTCTCCTTCCTGTGCTGAATGAGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGATCACCTATCAAAACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCTCCAAGTGACCTaGAATAGAAAACACAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: FQDHLSKPLCVCVCVCVCRLQVT*NRKHNF Trigger: AAAGTTGTGTTTTCTATTCAAGGTCACTTGGAGCCT...ACACACACACACACACACACACACACACAAAGGTTTTGATAGGTGATCCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCACTGACTCCCAGAAATaGTGCTCTGATGGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTHQTVILALETFLGNQTTDSQK*CSDGIQ Trigger: TTGTATGCCATCAGAGCACAATTTCTGGGAGTCAGT...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCGAATACACAGCCCCATaGGAAGCACTTGTTTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: LTHQTVILALETFLGNQTEYTAP*EALVLL Trigger: GAGTAAAACAAGTGCTTCCAATGGGGCTGTGTATTC...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR TCA 72 bp | CTTAAAGCCATGAGTCTTTCAAATTGTTCTAAGTGGTaGTTTGTCACCAAGAGGCCAAAGCAATCTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKAMSLSNCSKW*FVTKRPKQSYR Trigger: TCTGTAAGATTGCTTTGGCCTCTTGGTGACAAATCACCACTTAGAACAATTTGAAAGACTCATGGCTTTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR TCA 72 bp | CTTCCCTGCCAGAATGGATTGAAACTCTTAAAGCCATaGGTCTTTCAAATTGTTCTAAGTGGTGATTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPCQNGLKLLKP*VFQIVLSGDLS Trigger: TGACAAATCACCACTTAGAACAATTTGAAAGACTCATGGCTTTAAGAGTTTCAATCCATTCTGGCAGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR TCA 72 bp | GATTTCTTTCACTATCAACACTGGAGGCATTTCATCTaGATGAGTAGCATTCTTATGAAATTCCAAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DFFHYQHWRHFI*MSSILMKFQAQ Trigger: TTGGGCTTGGAATTTCATAAGAATGCTACTCATTCAGATGAAATGCCTCCAGTGTTGATAGTGAAAGAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAGCCTTGTCTATATAGCAAGCTCAGGCCAGCCAAGGGCTACATTGTCCCTTTGGAGTGAGCCTTaGCCTCCCCTCCCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EASLVYIASSGQPRATLSLWSEP*PPLPKS Trigger: TGATTTGGGGAGGGGAGGTCAAGGCTCACTCCAAAG...GGACAATGTAGCCCTTGGCTGGCCTGAGCTTGCTATATAGACAAGGCTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | GTGAGTTCAAGGCCAGCTTCCTTTACATGGCAAGTTCCAGGATGGCCAGAACTGCAGGAGGCTCTGCTGTaGGTACTGCCCAGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSRPASFTWQVPGWPELQEALL*VLPRCL Trigger: CAAACACCTGGGCAGTACCCACAGCAGAGCCTCCTG...CAGTTCTGGCCATCCTGGAACTTGCCATGTAAAGGAAGCTGGCCTTGAACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGATCACTCCTCCAGCAATaGTCATCCTGGCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGSLLQQ*SSWPAT Trigger: TGTGGCTGGCCAGGATGATCATTGCTGGAGGAGTGA...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAGCCTTGTCTATATAGCAAGCTCAGGCCAGCCAAGGGCTACATTGTCCCGGTCCGAGGCTATCTaGGTATATAACTCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EASLVYIASSGQPRATLSRSEAI*VYNSLL Trigger: GAGGAGTGAGTTATATACTCAGATAGCCTCGGACCG...GGACAATGTAGCCCTTGGCTGGCCTGAGCTTGCTATATAGACAAGGCTGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | CCGAGTAAGGGGACTAAAGCTTGTGTCCCTGTGCCATaGGAAGTGAGAAGTCTTCCTCACAAGCTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSKGTKACVPVP*EVRSLPHKLLL Trigger: GAGCAGCAGCTTGTGAGGAAGACTTCTCACTTCCAATGGCACAGGGACACAAGCTTTAGTCCCCTTACTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCCAGCCTTGTCTATATAGCAAGCTCAGGCCAGCCAAGGGCTACATTGTCCTCAAGAAGGAAGCCATaGTCAGACAGACATCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EASLVYIASSGQPRATLSSRRKP*SDRHQL Trigger: GAGCTGATGTCTGTCTGATCATGGCTTCCTTCTTGA...GGACAATGTAGCCCTTGGCTGGCCTGAGCTTGCTATATAGACAAGGCTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCACTCTGCTGTGGGTACTaGCCAGGTGTTTGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPLCCGY*PGVCQR Trigger: TCTTTGGCAAACACCTGGGCAGTACCCACAGCAGAG...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAGCCTTGTCTATATAGCAAGCTCAGGCCAGCCAAGGGCTACATTGTCCCTATTGGTATCATGCTaGGGTTCTCACAGCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EASLVYIASSGQPRATLSLLVSC*GSHSLL Trigger: TAGGAGGCTGTGAGAACCCCAGCATGATACCAATAG...GGACAATGTAGCCCTTGGCTGGCCTGAGCTTGCTATATAGACAAGGCTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCAAGAGGATGGGCCCCTTaGCCTTCTCTATTGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPRGWAP*PSLLVS Trigger: TGATACCAATAGAGAAGGCCAAGGGGCCCATCCTCT...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | CTGATAGGGAAGAATGGCAACAAGAAAGCCAGAGCCTaGAGCACTGAGGGTGGGACTCTTGGAGATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIGKNGNKKARA*STEGGTLGDGE Trigger: TTCACCATCTCCAAGAGTCCCACCCTCAGTGCTCAAGGCTCTGGCTTTCTTGTTGCCATTCTTCCCTATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCCAGCCAAGGGCTACATTGTCCCAAGAGATATTGTAAGAGGAGGAGGACCACAATGTCCAGAATaGCAGAGAAAGCCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPAKGYIVPRDIVRGGGPQCPE*QRKPPS Trigger: TGAAGGTGGCTTTCTCTGGCATTCTGGACATTGTGG...TCCTCCTCCTCTTACAATATCTCTTGGGACAATGTAGCCCTTGGCTGGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | CATCCTTACACACAGGGGCAATCACTGGAACACATGCTAGGGAGAACTGACTCCTCTCTATTGGTATCATaGTGGGGTTCTCACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPYTQGQSLEHMLGRTDSSLLVS*WGSHSL Trigger: GAGGCTGTGAGAACCCCAGCATGATACCAATAGAGA...GGAGTCAGTTCTCCCTAGCATGTGTTCCAGTGATTGCCCCTGTGTGTAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGATCACCTATCAAAACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGGGTCCTTGTCCTaGGGGCAGGAAGAGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQDHLSKPLCVCVCVCVCKGSLS*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGACAAGGACCCTTT...ACACACACACACACACACACACACACACAAAGGTTTTGATAGGTGATCCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | ACCTTTTGCCTCAGGATTGTGGCTAAGCTTTTGGACTaGTCATGCAGACTCCACTGGAGTGGCTGTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: TFCLRIVAKLLD*SCRLHWSGCGI Trigger: TATGCCACAGCCACTCCAGTGGAGTCTGCATGACAAGTCCAAAAGCTTAGCCACAATCCTGAGGCAAAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | AAGCTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAAGAAAATCTAAAGGGTCCTTGTCCTaGGGGCAGGAAGAGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLCNRERGSVRCSKPRKSKGSLS*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGACAAGGACCCTTT...AGATTTTCTTGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
||
| CDS-3UTR CCA 90 bp | GAGATACAGACAGACAGACAGAGATCAGTTAGGGGACACTGTAATGTAGGAAAGCAGCCACAAAGAGGATaGGCCCCTTGGCCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EIQTDRQRSVRGHCNVGKQPQRG*APWPSL Trigger: TAGAGAAGGCCAAGGGGCCCATCCTCTTTGTGGCTG...CTTTCCTACATTACAGTGTCCCCTAACTGATCTCTGTCTGTCTGTCTGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCATCTGGGCTTTGGAGTaGGCCTTGACCTCCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTHQTVILALETFLGNQTIWALE*ALTSPP Trigger: GGGAGGGGAGGTCAAGGCTCACTCCAAAGCCCAGAT...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | TTCTACTGTGATAGAAGGGCATCTGACTCCTTCAAGTaGTCCTGTGACCACCCCGCCCCAACATTAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FYCDRRASDSFK*SCDHPAPTLNV Trigger: TACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTCAGATGCCCTTCTATCACAGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | AGGAGACCAGTTTCCATGAAACCTTTTGCCTCAGGATaGTGGCTAAGCTTTTGGACTTGTCATGCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRPVSMKPFASG*WLSFWTCHADS Trigger: GGAGTCTGCATGACAAGTCCAAAAGCTTAGCCACAATCCTGAGGCAAAAGGTTTCATGGAAACTGGTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | TCTTATGAAATTCCAAGCCCAAGGTCGGCTCATCAATaGCCTAGGATATTGAGACACCAATGGAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYEIPSPRSAHQ*PRILRHQWRPG Trigger: TCCTGGCCTCCATTGGTGTCTCAATATCCTAGGCAATTGATGAGCCGACCTTGGGCTTGGAATTTCATAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | CCAATGAGTCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCATACTGCCCAGGTGTTTaGCAAAGAAGAATAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PMSQLSGQKHRTQQPYTPYCPGV*QRRIEF Trigger: AAATTCTATTCTTCTTTGGCAAACACCTGGGCAGTA...TGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGACTCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAACATGGGAAAGTAAGGTaGTTCGATGTAATGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKHGKVR*FDVMPS Trigger: ACTGGGCATTACATCGAACCACCTTACTTTCCCATG...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR TCA 90 bp | AAGCTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAAGAAAATCTCACCATAAACATCGATaGTGCCTGGAAAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLCNRERGSVRCSKPRKSHHKHR*CLERVL Trigger: AAGGACCCTTTCCAGGCATCATCGATGTTTATGGTG...AGATTTTCTTGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
||
| CDS-3UTR TCA 90 bp | AGACACCAATGGAGGCCAGGAAGCAATGTTCAATCTAACTTAACTATTTGTCAACACCATAAACATCGATaGTGCCTGGAAAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHQWRPGSNVQSNLTICQHHKHR*CLERVL Trigger: AAGGACCCTTTCCAGGCATCATCGATGTTTATGGTG...TTGACAAATAGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CCA 90 bp | ACAAAAACAGCTGCAACTACCACTGAAATGCTGAACTTAGAAGAAATCATACCTTGGGCCTTTTACCTTTaGATGTCGAAGCATGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: TKTAATTTEMLNLEEIIPWAFYL*MSKHVP Trigger: CGGTACATGCTTCGACATCCAAAGGTAAAAGGCCCA...AGGTATGATTTCTTCTAAGTTCAGCATTTCAGTGGTAGTTGCAGCTGTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCGGCGGAATCATGGTCTaGTTGTACTTGATATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTHQTVILALETFLGNQTGGIMV*LYLICL Trigger: CAGACATATCAAGTACAAGCAGACCATGATTCCGCC...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| 3UTR CAA 72 bp | TTCTGCTTAATTATCCCCAGAGGTGTTGCAAGAGTCTaGACTCACCAAACAGTAATCTTAGCTTTAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: FCLIIPRGVARV*THQTVILALET Trigger: CGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAAGACTCTTGCAACACCTCTGGGGATAATTAAGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR GCA 90 bp | TTGACTCACCAAACAGTAATCTTAGCTTTAGAAACGTTTCTAGGTAACCAAACCTCTGTTTCCACTGAATaGAGAGCCATTGATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHQTVILALETFLGNQTSVSTE*RAIDGN Trigger: GTTTCCATCAATGGCTCTGCATTCAGTGGAAACAGA...GGTTTGGTTACCTAGAAACGTTTCTAAAGCTAAGATTACTGTTTGGTGAGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS TCA 90 bp | CGGCTCGGTATTCCAACAGGCCTCCTCCAACACCATAAACATCGATaGTGCCTGGAAAGGGTCCTTGTCCTGGGGGCAGGAAGAGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGIPTGLLQHHKHR*CLERVLVLGAGRAW Trigger: CCACGCTCTTCCTGCCCCCAGGACAAGGACCCTTTCCAGGCATCATCGATGTTTATGGTGTTGGAGGAGGCCTGTTGGAATACCGAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021652.5 ENSMUST00000128162.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTCAGTGGGCAAAAGCACAGAACACAGCAGCCTTACACACCAGCCTTACAGCCTGGAAAGGGTCCTaGTCCTGGGGGCAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAQWAKAQNTAALHTSLTAWKGS*SWGQEE Trigger: CTCTTCCTGCCCCCAGGACAAGGACCCTTTCCAGGC...TGTAAGGCTGGTGTGTAAGGCTGCTGTGTTCTGTGCTTTTGCCCACTGAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS GCA 90 bp | CAGCCACAAAGAGGATGGGCCCCTTGGCCTTCTCTATTGGTATCATaGTGGGGTTCTCACAGCCTCCTACAGCATCATTCCGTATATCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPQRGWAPWPSLLVS*WGSHSLLQHHSVYP Trigger: TGGATATACGGAATGATGCTGTAGGAGGCTGTGAGAACCCCAGCATGATACCAATAGAGAAGGCCAAGGGGCCCATCCTCTTTGTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS CCA 90 bp | CCACAAAGAGGATGGGCCCCTTGGCCTTCTCTATTGGTATCATGCTaGGGTTCTCACAGCCTCCTACAGCATCATTCCGTATATCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PQRGWAPWPSLLVSC*GSHSLLQHHSVYPQ Trigger: TTGTGGATATACGGAATGATGCTGTAGGAGGCTGTGAGAACCCCAGCATGATACCAATAGAGAAGGCCAAGGGGCCCATCCTCTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
||
| CDS-3UTR CAA 90 bp | GTGAGTTCAAGGCCAGCTTCCTTTACATGGCAAGTTCCAGGATGGCCAGAACTGCTGGGCCTTTTACCTTaGGATGTCGAAGCATGTACC | + |
|
Preference number: 5 (lower is better) Translates to: VSSRPASFTWQVPGWPELLGLLP*DVEACT Trigger: GGTACATGCTTCGACATCCAAAGGTAAAAGGCCCAG...CAGTTCTGGCCATCCTGGAACTTGCCATGTAAAGGAAGCTGGCCTTGAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTATGAAGCTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAGCCTGGAAAGGGTCCTaGTCCTGGGGGCAGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: MFMKLCNRERGSVRCSKPAWKGS*SWGQEE Trigger: CTCTTCCTGCCCCCAGGACAAGGACCCTTTCCAGGC...TGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAGCTTCATAAACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
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| CDS-3UTR CAA 90 bp | GTGAGTTCAAGGCCAGCTTCCTTTACATGGCAAGTTCCAGGATGGCCAGAACTGATGGTCTGCTTGTACTaGATATGTCTGTTTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: VSSRPASFTWQVPGWPELMVCLY*ICLFPL Trigger: CAGTGGAAACAGACATATCAAGTACAAGCAGACCAT...CAGTTCTGGCCATCCTGGAACTTGCCATGTAAAGGAAGCTGGCCTTGAACTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS GCA 90 bp | AATGTCTGGGCCTTTTACCTTTGGATGTCGAAGCATGTACCGCACTaGTTCTTCAAAGTAGTCCACTTCTATGACGTTGAGCTCTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: NVWAFYLWMSKHVPH*FFKVVHFYDVELFG Trigger: CCCAAAGAGCTCAACGTCATAGAAGTGGACTACTTTGAAGAAGCAGTGCGGTACATGCTTCGACATCCAAAGGTAAAAGGCCCAGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS-3UTR CAA 90 bp | GAGATACAGACAGACAGACAGAGATCAGTTAGGGGACACTGTAATGTAGGAAAGCTGAATGCAGAGCCATaGATGGAAACTGTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: EIQTDRQRSVRGHCNVGKLNAEP*METVAE Trigger: CTCAGCCACAGTTTCCATCAATGGCTCTGCATTCAG...CTTTCCTACATTACAGTGTCCCCTAACTGATCTCTGTCTGTCTGTCTGTATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS-3UTR CAA 90 bp | CTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAAGAAAATCTCCCATGACGTTGAGCTCTTaGGGGAGATCCTCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LCNRERGSVRCSKPRKSPMTLSS*GRSSKS Trigger: TGACTTTGAGGATCTCCCCAAAGAGCTCAACGTCAT...GGGAGATTTTCTTGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
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| CDS-3UTR CAA 90 bp | GACTCCTTCAAGTTGTCCTGTGACCACCCCGCCCCAACATTAAATGTAATTAAAGTACTGCCCAGGTGTTaGCCAAAGAAGAATAGAATT | + |
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Preference number: 5 (lower is better) Translates to: DSFKLSCDHPAPTLNVIKVLPRC*PKKNRI Trigger: AATTCTATTCTTCTTTGGCAAACACCTGGGCAGTAC...TTTAATTACATTTAATGTTGGGGCGGGGTGGTCACAGGACAACTTGAAGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS-3UTR CAA 90 bp | AAGCTATGCAACAGAGAAAGGGGAAGTGTTAGATGCTCAAAGCCAAGAAAATCTACACAAGGAGAACCTTaGGATGTCGAAGCATGTACC | + |
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Preference number: 5 (lower is better) Translates to: KLCNRERGSVRCSKPRKSTQGEP*DVEACT Trigger: GGTACATGCTTCGACATCCAAAGGTTCTCCTTGTGT...AGATTTTCTTGGCTTTGAGCATCTAACACTTCCCCTTTCTCTGTTGCATAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128162.2 |
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| CDS-3UTR CAA 90 bp | AGACACCAATGGAGGCCAGGAAGCAATGTTCAATCTAACTTAACTATTTGTCAAATGACGTTGAGCTCTTaGGGGAGATCCTCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RHQWRPGSNVQSNLTICQMTLSS*GRSSKS Trigger: TGACTTTGAGGATCTCCCCAAAGAGCTCAACGTCAT...TTGACAAATAGTTAAGTTAGATTGAACATTGCTTCCTGGCCTCCATTGGTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS CCA 72 bp | CAGGCCTCCTCCAACACCATAAACATCGATGATGCCTaGAAAGGGTCCTTGTCCTGGGGGCAGGAAGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: QASSNTINIDDA*KGSLSWGQEER Trigger: ACGCTCTTCCTGCCCCCAGGACAAGGACCCTTTCCAGGCATCATCGATGTTTATGGTGTTGGAGGAGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021652.5 ENSMUST00000128162.2 |
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| CDS TCA 72 bp | ATTCCAACAGGCCTCCTCCAACACCATAAACATCGATaGTGCCTGGAAAGGGTCCTTGTCCTGGGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: IPTGLLQHHKHR*CLERVLVLGAG Trigger: TCCTGCCCCCAGGACAAGGACCCTTTCCAGGCATCATCGATGTTTATGGTGTTGGAGGAGGCCTGTTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021652.5 ENSMUST00000128162.2 |
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| CDS GCA 72 bp | AGAGGATGGGCCCCTTGGCCTTCTCTATTGGTATCATaGTGGGGTTCTCACAGCCTCCTACAGCATCATTCC | + |
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Preference number: 6 (lower is better) Translates to: RGWAPWPSLLVS*WGSHSLLQHHS Trigger: GGAATGATGCTGTAGGAGGCTGTGAGAACCCCAGCATGATACCAATAGAGAAGGCCAAGGGGCCCATCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS CCA 72 bp | GGATGGGCCCCTTGGCCTTCTCTATTGGTATCATGCTaGGGTTCTCACAGCCTCCTACAGCATCATTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: GWAPWPSLLVSC*GSHSLLQHHSV Trigger: TACGGAATGATGCTGTAGGAGGCTGTGAGAACCCCAGCATGATACCAATAGAGAAGGCCAAGGGGCCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS CCA 72 bp | TCCAGCAATGATCATCCTGGCCAGCCACAAAGAGGATaGGCCCCTTGGCCTTCTCTATTGGTATCATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSNDHPGQPQRG*APWPSLLVSCW Trigger: CCAGCATGATACCAATAGAGAAGGCCAAGGGGCCCATCCTCTTTGTGGCTGGCCAGGATGATCATTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS CAA 72 bp | CTCAGGTCATGGCCCAACGGCGGAATCATGGTCTGCTaGTACTTGATATGTCTGTTTCCACTGAATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LRSWPNGGIMVC*YLICLFPLNAE Trigger: CTCTGCATTCAGTGGAAACAGACATATCAAGTACAAGCAGACCATGATTCCGCCGTTGGGCCATGACCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS CAA 72 bp | TCATGGCCCAACGGCGGAATCATGGTCTGCTTGTACTaGATATGTCTGTTTCCACTGAATGCAGAGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: SWPNGGIMVCLY*ICLFPLNAEPL Trigger: CAATGGCTCTGCATTCAGTGGAAACAGACATATCAAGTACAAGCAGACCATGATTCCGCCGTTGGGCCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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| CDS GCA 72 bp | GCCTTTTACCTTTGGATGTCGAAGCATGTACCGCACTaGTTCTTCAAAGTAGTCCACTTCTATGACGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFYLWMSKHVPH*FFKVVHFYDVE Trigger: CTCAACGTCATAGAAGTGGACTACTTTGAAGAAGCAGTGCGGTACATGCTTCGACATCCAAAGGTAAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021652.5 |
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