Pregenerated sensors for ACOT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021228Ensembl transcript IDs: ENSMUST00000021653.8, ENSMUST00000120927.8, ENSMUST00000223080.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTGTGCTTGTGTGTATATGTGTGTGTGTACACATGTGTATGGGTaGCCAAGGAGGTCAGACGAGAGCTCTGCATCCCTTAGAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: MCACVYMCVCTHVYG*PRRSDESSASLRAG Trigger: TCCAGCTCTAAGGGATGCAGAGCTCTCGTCTGACCTCCTTGGGCACCCATACACATGTGTACACACACACATATACACACAAGCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR TCA 90 bp | AATGCCCTCCGAGTGAGTGTGGTGTGCTGTGTAGACTGTAGCATGTaGAAGTCTGTATACATAAATCTCCAGTCAGTGGAGTCCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: NALRVSVVCCVDCSM*KSVYINLQSVESTG Trigger: TCCTGTGGACTCCACTGACTGGAGATTTATGTATACAGACTTTCACATGCTACAGTCTACACAGCACACCACACTCACTCGGAGGGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR GCA 90 bp | GTATTTCCATATAATACACGTATAACCTTTAAGTCACTTGCAGACTaGTTAAAATGTGAACTACAGCATAAATGCCCTCCGAGTGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: VFPYNTRITFKSLAD*LKCELQHKCPPSEC Trigger: ACACTCACTCGGAGGGCATTTATGCTGTAGTTCACATTTTAAGCAGTCTGCAAGTGACTTAAAGGTTATACGTGTATTATATGGAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGAGTCCACAGGACAGAGCCCACACAGGACCATTGTTTATGACTTTGTTTTTGCAGAGATCTGACTaGCTCTGTCCCCACTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QWSPQDRAHTGPLFMTLFLQRSD*LCPHSP Trigger: TGGGGAGTGGGGACAGAGGCAGTCAGATCTCTGCAA...AAACAAAGTCATAAACAATGGTCCTGTGTGGGCTCTGTCCTGTGGACTCCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTACAGTCAGTTGTTCTCGTACCTGGACCCAAACTTGGGTCCTATAGGAGCATGTGCCCTTAACTGCTaGGCCATCTTTTCAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SYSQLFSYLDPNLGPIGACALNC*AIFSVP Trigger: AGGAACTGAAAAGATGGCTCAGCAGTTAAGGGCACA...TGCTCCTATAGGACCCAAGTTTGGGTCCAGGTACGAGAACAACTGACTGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAGAAACACACACACAGTaGAAGCTTCCTCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CKRETHTQWKLPQEREASETHTQ*KLPQER Trigger: TCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTC...TGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| 3UTR-3UTR CCA 90 bp | AACGGCAGTTTCTGCAATGCCTTATGTTTTCTGTATAATCACTCCCCTTCAAGAGAAACACACACACAGTaGAAGCTTCCTCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NGSFCNALCFLYNHSPSRETHTQ*KLPQER Trigger: TCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTC...TCTTGAAGGGGAGTGATTATACAGAAAACATAAGGCATTGCAGAAACTGCCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGTTTTCTGTATAATCACTCCCCTTCAAGACTTATCAATAAGGCCTGCAGCGAAACACACACACAGTaGAAGCTTCCTCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LCFLYNHSPSRLINKACSETHTQ*KLPQER Trigger: TCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTC...GCTGCAGGCCTTATTGATAAGTCTTGAAGGGGAGTGATTATACAGAAAACATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| 3UTR CAA 90 bp | ACAGCACATTTGATGTTAGAGTTGTCCACTGGTAGTTGTAAGCATTaGATACAGATGGCAAATCTGCAATGGCTGACATTTCTCGGATAC | + |
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Preference number: 2 (lower is better) Translates to: TAHLMLELSTGSCKH*IQMANLQWLTFLGY Trigger: GTATCCGAGAAATGTCAGCCATTGCAGATTTGCCATCTGTATCAAATGCTTACAACTACCAGTGGACAACTCTAACATCAAATGTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGTATTTTTATTCATGTGTGCTTGTGTGTATATGTGTGTGTGTACACATGTTGTGCCCTTAACTGCTaGGCCATCTTTTCAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PCIFIHVCLCVYVCVYTCCALNC*AIFSVP Trigger: AGGAACTGAAAAGATGGCTCAGCAGTTAAGGGCACA...ACATGTGTACACACACACATATACACACAAGCACACATGAATAAAAATACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTATTTTTATTCATGTGTGCTTGTGTGTATATGTGTGTGTGTACACATGTAAAAACGGCAGTTTCTaGAATGCCTTATGTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: PCIFIHVCLCVYVCVYTCKNGSF*NALCFL Trigger: CAGAAAACATAAGGCATTGCAGAAACTGCCGTTTTT...ACATGTGTACACACACACATATACACACAAGCACACATGAATAAAAATACATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR GCA 72 bp | TGGAACTCCCTCTGTAGACCAGGTTGGCTTCCAACTTaGAGAGATCTGACTGCCTCTGTCCCCACTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: WNSLCRPGWLPT*RDLTASVPTPH Trigger: GTGGGGAGTGGGGACAGAGGCAGTCAGATCTCTGCAAGTTGGAAGCCAACCTGGTCTACAGAGGGAGTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGAGTCCACAGGACAGAGCCCACACAGGACCATTGTTTATGACTTTGTTTTACCTGGACCCAAACTaGGGTCCTATAGGAGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: QWSPQDRAHTGPLFMTLFYLDPN*GPIGAV Trigger: CACTGCTCCTATAGGACCCAAGTTTGGGTCCAGGTA...AAACAAAGTCATAAACAATGGTCCTGTGTGGGCTCTGTCCTGTGGACTCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR GCA 72 bp | TGTGTGTATATGTGTGTGTGTACACATGTGTATGGGTaGCCAAGGAGGTCAGACGAGAGCTCTGCATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: CVYMCVCTHVYG*PRRSDESSASL Trigger: AAGGGATGCAGAGCTCTCGTCTGACCTCCTTGGGCACCCATACACATGTGTACACACACACATATACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR CCA 72 bp | TGCTTGTGTGTATATGTGTGTGTGTACACATGTGTATaGGTGCCCAAGGAGGTCAGACGAGAGCTCTGCATC | + |
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Preference number: 3 (lower is better) Translates to: CLCVYVCVYTCV*VPKEVRRELCI Trigger: GATGCAGAGCTCTCGTCTGACCTCCTTGGGCACCCATACACATGTGTACACACACACATATACACACAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR TCA 72 bp | TTGGGTCCTATAGGAGCAGTGTGTGCCCTTAACTGCTaGGCCATCTTTTCAGTTCCTGTCGATGTTTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: LGPIGAVCALNC*AIFSVPVDVCL Trigger: TAGACAAACATCGACAGGAACTGAAAAGATGGCTCAGCAGTTAAGGGCACACACTGCTCCTATAGGACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR GCA 72 bp | CTTGCAGACTGCTTAAAATGTGAACTACAGCATAAATaGCCTCCGAGTGAGTGTGGTGTGCTGTGTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: LADCLKCELQHK*PPSECGVLCRL Trigger: CAGTCTACACAGCACACCACACTCACTCGGAGGGCATTTATGCTGTAGTTCACATTTTAAGCAGTCTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR TCA 72 bp | CGAGTGAGTGTGGTGTGCTGTGTAGACTGTAGCATGTaGAAGTCTGTATACATAAATCTCCAGTCAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: RVSVVCCVDCSM*KSVYINLQSVE Trigger: CTCCACTGACTGGAGATTTATGTATACAGACTTTCACATGCTACAGTCTACACAGCACACCACACTCACTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| 3UTR TCA 72 bp | GGTAGTAATTCCATCCCAAAAGAACAAACTCACCTGTaGGGTCACAGCACATTTGATGTTAGAGTTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: GSNSIPKEQTHL*GHSTFDVRVVH Trigger: GTGGACAACTCTAACATCAAATGTGCTGTGACCTCACAGGTGAGTTTGTTCTTTTGGGATGGAATTACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGAGTCCACAGGACAGAGCCCACACAGGACCATTGTTTATGACTTTGTTTAAAGGGTCCAGTTCCTaGGGGCAGGAAGAGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QWSPQDRAHTGPLFMTLFKGSSS*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGAACTGGACCCTTT...AAACAAAGTCATAAACAATGGTCCTGTGTGGGCTCTGTCCTGTGGACTCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| CDS-3UTR TCA 90 bp | AGTTACAGTCAGTTGTTCTCGTACCTGGACCCAAACTTGGGTCCTATAGGAGCATCTCTGGGTAGCAGATaGTCTGGGGCTTCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SYSQLFSYLDPNLGPIGASLGSR*SGASPS Trigger: GGAAGGAGAAGCCCCAGATCATCTGCTACCCAGAGA...TGCTCCTATAGGACCCAAGTTTGGGTCCAGGTACGAGAACAACTGACTGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CCA 90 bp | TGTAAAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAAAAGGGTCCAGTTCCTaGGGGCAGGAAGAGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CKRETHTQWKLPQEREASKGSSS*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGAACTGGACCCTTT...TGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| CDS-3UTR CCA 90 bp | AACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAGAGATCTTAAAAAAGGGTCCAGTTCCTaGGGGCAGGAAGAGCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NTHTVEASSGERSIRDLKKGSSS*GQEERG Trigger: GCCACGCTCTTCCTGCCCCCAGGAACTGGACCCTTT...TTTAAGATCTCTGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| 3UTR CAA 72 bp | CAAGTAGTCCTTGAACTCCAGGGATGTAGCAGTGACTaGGTCTTTCTTTCAGCACTACAGCTCGCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QVVLELQGCSSD*VFLSALQLAGR Trigger: TCTCCCAGCGAGCTGTAGTGCTGAAAGAAAGACCAAGTCACTGCTACATCCCTGGAGTTCAAGGACTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| 3UTR CAA 72 bp | AGTTACAGTCAGTTGTTCTCGTACCTGGACCCAAACTaGGGTCCTATAGGAGCAGTGTGTGCCCTTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: SYSQLFSYLDPN*GPIGAVCALNC Trigger: GCAGTTAAGGGCACACACTGCTCCTATAGGACCCAAGTTTGGGTCCAGGTACGAGAACAACTGACTGTAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR TCA 90 bp | TTATGTTTTCTGTATAATCACTCCCCTTCAAGACTTATCAATAAGGCCTGCAGCTCTCTGGGTAGCAGATaGTCTGGGGCTTCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LCFLYNHSPSRLINKACSSLGSR*SGASPS Trigger: GGAAGGAGAAGCCCCAGATCATCTGCTACCCAGAGA...GCTGCAGGCCTTATTGATAAGTCTTGAAGGGGAGTGATTATACAGAAAACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 ENSMUST00000223080.2 |
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| 3UTR CAA 72 bp | CAAAAGAACAAACTCACCTGTGAGGTCACAGCACATTaGATGTTAGAGTTGTCCACTGGTAGTTGTAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QKNKLTCEVTAH*MLELSTGSCKH Trigger: ATGCTTACAACTACCAGTGGACAACTCTAACATCAAATGTGCTGTGACCTCACAGGTGAGTTTGTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| CDS-3UTR TCA 90 bp | GAGAGAGAAGCATCAGAGATCTTAAATAAAAATCACAGTTTTGCTGGGATTGTCTTCCAAAAAGGTCTATaGTTCCAGGAAAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EREASEILNKNHSFAGIVFQKGL*FQERVQ Trigger: CTGGACCCTTTCCTGGAATCATAGACCTTTTTGGAA...GACAATCCCAGCAAAACTGTGATTTTTATTTAAGATCTCTGATGCTTCTCTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000223080.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGTCACCACCACACAGATGTTTACTCTTTCAAACCATGTATTTTTATTCATTCCAAAAAGGTCTATaGTTCCAGGAAAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CVSPPHRCLLFQTMYFYSFQKGL*FQERVQ Trigger: CTGGACCCTTTCCTGGAATCATAGACCTTTTTGGAA...TGAATAAAAATACATGGTTTGAAAGAGTAAACATCTGTGTGGTGGTGACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| CDS-3UTR TCA 90 bp | CCATGTATTTTTATTCATGTGTGCTTGTGTGTATATGTGTGTGTGTACACATGTTTCCAAAAAGGTCTATaGTTCCAGGAAAGGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PCIFIHVCLCVYVCVYTCFQKGL*FQERVQ Trigger: CTGGACCCTTTCCTGGAATCATAGACCTTTTTGGAA...ACATGTGTACACACACACATATACACACAAGCACACATGAATAAAAATACATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AGCTGGAGTTACAGTCAGTTGTTCTCGTACCTGGACCCAAACTTGGGTCCTATACCAAGTTCACCCCCTTaGGAAATGCCAAGGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: SWSYSQLFSYLDPNLGPIPSSPP*EMPRTP Trigger: CGGGGTCCTTGGCATTTCCAAAGGGGGTGAACTTGG...TATAGGACCCAAGTTTGGGTCCAGGTACGAGAACAACTGACTGTAACTCCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AGTTACAGTCAGTTGTTCTCGTACCTGGACCCAAACTTGGGTCCTATAGGAGCATTGGATATAGAGCCATaGATGATGACAGCGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SYSQLFSYLDPNLGPIGALDIEP*MMTAAV Trigger: CACAGCCGCTGTCATCATCAATGGCTCTATATCCAA...TGCTCCTATAGGACCCAAGTTTGGGTCCAGGTACGAGAACAACTGACTGTAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAGAGTTGGATATAGAGCCATaGATGATGACAGCGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KRETHTQWKLPQEREASELDIEP*MMTAAV Trigger: CACAGCCGCTGTCATCATCAATGGCTCTATATCCAA...CTCTGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGGTCACAGCACATTTGATGTTAGAGTTGTCCACTGGTAGTTGTAAGCATGGCACAGTCTCATCCTaGTACTGTAAGTTTCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: CEVTAHLMLELSTGSCKHGTVSS*YCKFPP Trigger: CGGCGGAAACTTACAGTACAAGGATGAGACTGTGCC...ATGCTTACAACTACCAGTGGACAACTCTAACATCAAATGTGCTGTGACCTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021653.8 |
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| CDS-3UTR CAA 90 bp | TGTAAAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCATCTTTGAGGCCATCTTaGGTTCTCTTGACTCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CKRETHTQWKLPQEREASSLRPS*VLLTRL Trigger: CAAGCGAGTCAAGAGAACCAAAGATGGCCTCAAAGA...TGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAGAGAAGATCCACAATGTCTTaGAGGCCATCTTTGGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KEKHTHSGSFLRREKHQRRSTMS*RPSLVL Trigger: GAGAACCAAAGATGGCCTCAAAGACATTGTGGATCT...TCTCTGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | CCATGTATTTTTATTCATGTGTGCTTGTGTGTATATGTGTGTGTGTACACATGTCCAAGTTCACCCCCTTaGGAAATGCCAAGGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: PCIFIHVCLCVYVCVYTCPSSPP*EMPRTP Trigger: CGGGGTCCTTGGCATTTCCAAAGGGGGTGAACTTGG...ACATGTGTACACACACACATATACACACAAGCACACATGAATAAAAATACATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | TGTAAAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAAGATCCACAATGTCTTaGAGGCCATCTTTGGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CKRETHTQWKLPQEREASRSTMS*RPSLVL Trigger: GAGAACCAAAGATGGCCTCAAAGACATTGTGGATCT...TGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAACACACACACAGTGGAAGCTTCCTCAGGAGAGAGAAGCATCAGAGAACAGTTTTGCTGGGATaGTCTTCTTTTTGCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: KEKHTHSGSFLRREKHQRTVLLG*SSFCHP Trigger: TGGATGGCAAAAAGAAGACAATCCCAGCAAAACTGT...TCTCTGATGCTTCTCTCTCCTGAGGAAGCTTCCACTGTGTGTGTGTTTCTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | TATGTTTTCTGTATAATCACTCCCCTTCAAGACTTATCAATAAGGCCTGCAGCTTCTTTGAGGCCATCTTaGGTTCTCTTGACTCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: YVFCIITPLQDLSIRPAASLRPS*VLLTRL Trigger: CAAGCGAGTCAAGAGAACCAAAGATGGCCTCAAAGA...AGCTGCAGGCCTTATTGATAAGTCTTGAAGGGGAGTGATTATACAGAAAACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS-3UTR CAA 90 bp | AACGGCAGTTTCTGCAATGCCTTATGTTTTCTGTATAATCACTCCCCTTCAAGAACAGTTTTGCTGGGATaGTCTTCTTTTTGCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: NGSFCNALCFLYNHSPSRTVLLG*SSFCHP Trigger: TGGATGGCAAAAAGAAGACAATCCCAGCAAAACTGT...TCTTGAAGGGGAGTGATTATACAGAAAACATAAGGCATTGCAGAAACTGCCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS CAA 72 bp | AAGAAGGAGGCCATGGCAAAGCCAAGTTCACCCCCTTaGGAAATGCCAAGGACCCCGACTCCTGAACCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KKEAMAKPSSPP*EMPRTPTPEPV Trigger: AACAGGTTCAGGAGTCGGGGTCCTTGGCATTTCCAAAGGGGGTGAACTTGGCTTTGCCATGGCCTCCTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS CAA 72 bp | ATGTCTTTGAGGCCATCTTTGGTTCTCTTGACTCGCTaGGTGTTTATGCCCACGGAGGGCACAGTCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: MSLRPSLVLLTR*VFMPTEGTVSS Trigger: GGATGAGACTGTGCCCTCCGTGGGCATAAACACCAAGCGAGTCAAGAGAACCAAAGATGGCCTCAAAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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| CDS CAA 72 bp | TTGGTGTTTATGCCCACGGAGGGCACAGTCTCATCCTaGTACTGTAAGTTTCCGCCGATGTTGGATATAGAG | + |
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Preference number: 6 (lower is better) Translates to: LVFMPTEGTVSS*YCKFPPMLDIE Trigger: CTCTATATCCAACATCGGCGGAAACTTACAGTACAAGGATGAGACTGTGCCCTCCGTGGGCATAAACACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021653.8 ENSMUST00000120927.8 |
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