Pregenerated sensors for ACOT12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021620Ensembl transcript IDs: ENSMUST00000022120.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAATAAGTAAGATAAAAACTGTAGCCAGCCTCAAACTATTTGAGTaGGCATGTGGGAGCAGGCCGGGGAGCAGAGGAGATCTGGTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: QISKIKTVASLKLFE*ACGSRPGSRGDLVR Trigger: CCTCACCAGATCTCCTCTGCTCCCCGGCCTGCTCCCACATGCCCACTCAAATAGTTTGAGGCTGGCTACAGTTTTTATCTTACTTATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR CCA 90 bp | AGATCCTGCAAACTGGAGTCCATACTGTCTATGTCTCAAGTAAGCTaGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCAGGAAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: RSCKLESILSMSQVS*LKLLKYFCFCSGKH Trigger: ATGTTTTCCTGAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGACAGTATGGACTCCAGTTTGCAGGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCGGCTGTGAGATCTTGTaGTTTGGCTCCAAATCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SKTKPTHIALKSLFISEVGCEIL*FGSKSP Trigger: TGGTGATTTGGAGCCAAACCACAAGATCTCACAGCC...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR-3UTR GCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCTATGGCCCCAAAGCTTaGCACATAAAAGGGCTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFYGPKA*HIKGLR Trigger: CCTTAGCCCTTTTATGTGGCAAGCTTTGGGGCCATA...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR CAA 90 bp | GAATACACATCGAGCTTCTGTAATCCAGAGCCAGATGTGATAGTGTaGACTAATTTTGTGCCATCTTATAGATCATGTGATATCGTATCC | + |
|
Preference number: 2 (lower is better) Translates to: EYTSSFCNPEPDVIV*TNFVPSYRSCDIVS Trigger: GGATACGATATCACATGATCTATAAGATGGCACAAAATTAGTCAACACTATCACATCTGGCTCTGGATTACAGAAGCTCGATGTGTATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGGGAGCAGGCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTGTAAAAGTCATCCTTaGAAGGAGGCTAACCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: MWEQAGEQRRSGEDSPNLCKSHP*KEANLT Trigger: TGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACA...CAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGCCTGCTCCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCGTATGGCCCCAAAGCTaGCCACATAAAAGGGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKTKPTHIALKSLFISEVVWPQS*PHKRAK Trigger: CTTAGCCCTTTTATGTGGCAAGCTTTGGGGCCATAC...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR CCA 72 bp | TTCTCAAAGACTCCTGACAAAGGTGTCTGCCGCCCATaGACTAATATTAAACACTCATCAGGTTTTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FSKTPDKGVCRP*TNIKHSSGFSP Trigger: TGGGCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCGGCAGACACCTTTGTCAGGAGTCTTTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR GCA 72 bp | GAATATATCTTCTCAAAGACTCCTGACAAAGGTGTCTaGCGCCCATGGACTAATATTAAACACTCATCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EYIFSKTPDKGV*RPWTNIKHSSG Trigger: ACCTGATGAGTGTTTAATATTAGTCCATGGGCGGCAGACACCTTTGTCAGGAGTCTTTGAGAAGATATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR CCA 72 bp | AAACTGGAGTCCATACTGTCTATGTCTCAAGTAAGCTaGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLESILSMSQVS*LKLLKYFCFCS Trigger: TGAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGACAGTATGGACTCCAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | GCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTCTCCTGCTCTCTGCTCTGGACAGAGGTaGCCATGGTGGTGGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGEQRRSGEDSPNLSPALCSGQR*PWWWPF Trigger: GAACGGCCACCACCATGGGCACCTCTGTCCAGAGCA...GAGAGCAGGAGACAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | ATGTGGGAGCAGGCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGAGGTGTTGTTGTCTTTaGGGGGCTTTCTTCGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: MWEQAGEQRRSGEDSPNLRCCCL*GAFFVT Trigger: TGTCACGAAGAAAGCCCCTCAAAGACAACAACACCT...CAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGCCTGCTCCCACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | GCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTCTCCTGCTCTCTATCCCACTGTGCACTaGGTGGAACTTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGEQRRSGEDSPNLSPALYPTVH*VELLSC Trigger: ACAAGAAAGAAGTTCCACTCAGTGCACAGTGGGATA...GAGAGCAGGAGACAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | ATGTGGGAGCAGGCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTCGTCCTCGCTCACCTaGTCTATAACTTCACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MWEQAGEQRRSGEDSPNLSSSLT*SITSQD Trigger: ATCTTGTGAAGTTATAGACCAGGTGAGCGAGGACGA...CAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGCCTGCTCCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTCTCCTAATCGTCCTTTGAAATaGGTTGGATTCTGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQAGEQRRSGEDSPNLSPNRPLK*VGFWER Trigger: CCTTTCCCAGAATCCAACCCATTTCAAAGGACGATT...AGGAGACAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCGCCGGCTGGATGGCCTaGCTCATGAGCACCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFAGWMA*LMSTSP Trigger: GGGTGAGGTGCTCATGAGCCAGGCCATCCAGCCGGC...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | CGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCCCACCATTTCACGTTGGCGGCTTGCAGAAATaGTGGCGACTGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPWTNIKHSSGFSPPFHVGGLQK*WRLSPS Trigger: GGATGGAGACAGTCGCCACCATTTCTGCAAGCCGCC...AACGTGAAATGGTGGGCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCATCTTATAGATCATGTGATATCGTATCCAGGCAATTTCCAAGTGTCAAAAGCGCTGTTGATGTaGCGGCCTTGGCCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCHLIDHVISYPGNFQVSKALLM*RPWPSA Trigger: GGCCGAGGGCCAAGGCCGCCACATCAACAGCGCTTT...TGACACTTGGAAATTGCCTGGATACGATATCACATGATCTATAAGATGGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCATCTTATAGATCATGTGATATCGTATCCAGGCAATTTCCAAGTGTCACCCTCGGCCCACTCCTaGCAGTCAAAGGCCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCHLIDHVISYPGNFQVSPSAHS*QSKAST Trigger: TGTTGAGGCCTTTGACTGTCAGGAGTGGGCCGAGGG...TGACACTTGGAAATTGCCTGGATACGATATCACATGATCTATAAGATGGCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | GACAAAGGTGTCTGCCGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCAGGGAGGATGCTGTCTaGCATCTGGTTCAGGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: DKGVCRPWTNIKHSSGFSREDAV*HLVQVR Trigger: ACGTACCTGAACCAGATGTCAGACAGCATCCTCCCT...GCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCGGCAGACACCTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCCACATAAAAGGGCTAAGGACACATTTGGAATTAAATTACAGGTAGCTGATGTACTGTGGAGATaGCGGGACAGACGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPHKRAKDTFGIKLQVADVLWR*RDRRQH Trigger: GTGCTGCCGTCTGTCCCGTCATCTCCACAGTACATC...AGCTACCTGTAATTTAATTCCAAATGTGTCCTTAGCCCTTTTATGTGGCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCACGCAGAGGAGCTTCTaGATGCCCGTGAACTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKTKPTHIALKSLFISEVTQRSF*MPVNLS Trigger: GGACAAGTTCACGGGCATCCAGAAGCTCCTCTGCGT...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | ATCACACTTTACAGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGGTTTCCGTGATGGTTTaGGTGGGGCGGAAGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITLYRCLACACIEIDTKLVSVMV*VGRKDK Trigger: CTTGTCCTTCCGCCCCACGCAAACCATCACGGAAAC...CAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCTGTAAAGTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | ATTTGTAAAAGTCATCCTTTGAAGGAGGCTAACCTGACACATTCTGCTTGGTCTAGGTGCCCATGGTGGTaGCCGTTCCTTCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICKSHPLKEANLTHSAWSRCPWW*PFLLLH Trigger: ATGAAGAAGAAGGAACGGCCACCACCATGGGCACCT...AGACCAAGCAGAATGTGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTGCCACATAAAAGGGCTAAGGACACATTTGGAATTAAATTACAGGTAGCTCATCCATGGAGGCTGTaGCACAGGAAATCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPHKRAKDTFGIKLQVAHPWRL*HRKSQH Trigger: ATGCTGGGATTTCCTGTGTCACAGCCTCCATGGATG...AGCTACCTGTAATTTAATTCCAAATGTGTCCTTAGCCCTTTTATGTGGCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCCCAAATGTGTTTCCGTaGTGGTTTGCGTGGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFPNVFP*WFAWGG Trigger: TCCGCCCCACGCAAACCATCACGGAAACACATTTGG...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAAAGCTTGCCACATAAAAGGGCTAAGGACACATTTGGAATTAAATTACCCCGTGAACTTGTCCTaGACTATGACCTTGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPKACHIKGLRTHLELNYPVNLS*TMTLIL Trigger: CAGTATCAAGGTCATAGTCCAGGACAAGTTCACGGG...GTAATTTAATTCCAAATGTGTCCTTAGCCCTTTTATGTGGCAAGCTTTGGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCCAGAGGTGCCCATGGTaGTGGCCGTTCCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFQRCPW*WPFLLL Trigger: AAGAAGAAGGAACGGCCACCACCATGGGCACCTCTG...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAAAGCTTGCCACATAAAAGGGCTAAGGACACATTTGGAATTAAATTACCCACTGTGCACTGAGTaGAACTTCTTTCTTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPKACHIKGLRTHLELNYPLCTE*NFFLVG Trigger: TCCCACAAGAAAGAAGTTCCACTCAGTGCACAGTGG...GTAATTTAATTCCAAATGTGTCCTTAGCCCTTTTATGTGGCAAGCTTTGGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGTAAAAGTCATCCTTTGAAGGAGGCTAACCTGACACATTCTGCTTGGTCTGCGAAAATCGTCCTTTaGAATGGGTTGGATTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICKSHPLKEANLTHSAWSAKIVL*NGLDSG Trigger: CCCAGAATCCAACCCATTTCAAAGGACGATTTTCGC...AGACCAAGCAGAATGTGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | CGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCCCACCATTTCACGTTTGGATGCCAGATTTTTaGGAGCTTCCACATTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPWTNIKHSSGFSPPFHVWMPDF*ELPHWC Trigger: ACACCAATGTGGAAGCTCTCAAAAATCTGGCATCCA...AACGTGAAATGGTGGGCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCCTGCAGCTTCCTCAATaGATTTTGACCAGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKTKPTHIALKSLFISEVLQLPQ*ILTSHQ Trigger: TTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGCAG...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGTAAAAGTCATCCTTTGAAGGAGGCTAACCTGACACATTCTGCTTGGTCTTTCCTCAATGGATTTTaGCCAGCCACCAATATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICKSHPLKEANLTHSAWSFLNGF*PATNIA Trigger: GGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAA...AGACCAAGCAGAATGTGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | ATCACACTTTACAGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGATCCATGCCATGATCTaGCCACCAAATGTGTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITLYRCLACACIEIDTKLIHAMI*PPNVFP Trigger: CGGAAACACATTTGGTGGCCAGATCATGGCATGGAT...CAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCTGTAAAGTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | ATTTGTAAAAGTCATCCTTTGAAGGAGGCTAACCTGACACATTCTGCTTGGTCTTTAGGGATCCCTTTTTaGTTATATCCCACTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICKSHPLKEANLTHSAWSLGIPF*LYPTVH Trigger: GTGCACAGTGGGATATAAGCAAAAAGGGATCCCTAA...AGACCAAGCAGAATGTGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | GACAAAGGTGTCTGCCGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCTTTTATACAAGAGGCTaGAGCTTCCTCAATGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DKGVCRPWTNIKHSSGFSFYTRG*SFLNGF Trigger: AAATCCATTGAGGAAGCTGCAGCCTCTTGTATAAAA...GCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCGGCAGACACCTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGGCCATCTACCTGCTTTTCTTTGCCAACTaGTTTAGCTACAAACGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCLACACIEIDTKLAIYLLFFAN*FSYKRR Trigger: TCTACGTTTGTAGCTAAACCAGTTGGCAAAGAAAAG...CAGGTAGATGGCCAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCCGCCCTAGTCACTTTTaGTCTGATGGTAATAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKTKPTHIALKSLFISEVRPSHF*SDGNNL Trigger: CAAATTATTACCATCAGAGCAAAAGTGACTAGGGCG...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCCCAACCGCTTTTGGATaGCAGATTTTTGAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFPTAFG*QIFESF Trigger: GAAGCTCTCAAAAATCTGGCATCCAAAAGCGGTTGG...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCATAAAGGTCGCTTTGTaGGGTCAGACAAGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFIKVAL*GQTRDD Trigger: ATCATCTCTTGTCTGACCTCACAAAGCGACCTTTAT...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR GCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCGCTTATATCCCACTGTaGACTGAGTGGAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFAYIPL*TEWNFF Trigger: AAAGAAGTTCCACTCAGTGCACAGTGGGATATAAGC...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| 3UTR CAA 72 bp | TCGAGCTTCTGTAATCCAGAGCCAGATGTGATAGTGTaGACTAATTTTGTGCCATCTTATAGATCATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSFCNPEPDVIV*TNFVPSYRSCD Trigger: ATCACATGATCTATAAGATGGCACAAAATTAGTCAACACTATCACATCTGGCTCTGGATTACAGAAGCTCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR TCA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCTTACCACCGAGCAAGTaGTGTAATATATCTGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFLPPSK*CNISDR Trigger: ACGATCAGATATATTACATCACTTGCTCGGTGGTAA...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | CAGCATGCTTTTCGGCCGCCAGGCAAGCGGTGGTGTCCATCCACTTaGGCAGCTGCCCTGCGCTCAGCTCGCCGCGGGAGTCGGCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHAFRPPGKRWCPST*AAALRSARRGSRHE Trigger: CTCATGCCGACTCCCGCGGCGAGCTGAGCGCAGGGCAGCTGCTCAAGTGGATGGACACCACCGCTTGCCTGGCGGCCGAAAAGCATGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | AGAAAAGCGCTGTTGATGTGGCGGCCTTGGCCCTCGGCCCACTCCTaGCAGTCAAAGGCCTCAACACGCACTCCGACTTCCACACTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKALLMWRPWPSAHS*QSKASTRTPTSTLF Trigger: GAACAGTGTGGAAGTCGGAGTGCGTGTTGAGGCCTTTGACTGTCAGGAGTGGGCCGAGGGCCAAGGCCGCCACATCAACAGCGCTTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | ACAGGCGGCTTGCAGAAATGGTGGCGACTGTCTCCATCCATGCCATaGTCTGGCCACCAAATGTGTTTCCGTGATGGTTTGCGTGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TGGLQKWWRLSPSMP*SGHQMCFRDGLRGA Trigger: CGCCCCACGCAAACCATCACGGAAACACATTTGGTGGCCAGATCATGGCATGGATGGAGACAGTCGCCACCATTTCTGCAAGCCGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | ATGTGTTTCCGTGATGGTTTGCGTGGGGCGGAAGGACAAGCTCGATaGTCTGGACAGAGGTGCCCATGGTGGTGGCCGTTCCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MCFRDGLRGAEGQAR*SGQRCPWWWPFLLL Trigger: AAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTCCGCCCCACGCAAACCATCACGGAAACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | CAATTCTCGCTGTGTCCTCAAACAGAATGTCATCCATGGAGGCTGTaGCACAGGAAATCCCAGCATGCTTTTCGGCCGCCAGGCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: QFSLCPQTECHPWRL*HRKSQHAFRPPGKR Trigger: CCGCTTGCCTGGCGGCCGAAAAGCATGCTGGGATTTCCTGTGTCACAGCCTCCATGGATGACATTCTGTTTGAGGACACAGCGAGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | GGTTTGCGTGGGGCGGAAGGACAAGCTCGATGCTCTGGACAGAGGTaGCCATGGTGGTGGCCGTTCCTTCTTCTTCATTACAAATGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLRGAEGQARCSGQR*PWWWPFLLLHYKWN Trigger: ATTCCATTTGTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTCCGCCCCACGCAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGGCCATCTACCTGGTTGATGTGGCGGCCTaGGCCCTCGGCCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLACACIEIDTKLAIYLVDVAA*ALGPLL Trigger: CAGGAGTGGGCCGAGGGCCAAGGCCGCCACATCAAC...CAGGTAGATGGCCAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | GCCGGGGAGCAGAGGAGATCTGGTGAGGATAGCCCAAACCTGTCTCCTGCTCTCCTTCCTCAATGGATTTaGACCAGCCACCAATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGEQRRSGEDSPNLSPALLPQWI*TSHQYC Trigger: GCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAG...GAGAGCAGGAGACAGGTTTGGGCTATCCTCACCAGATCTCCTCTGCTCCCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | GCAGCACAACTGACCTTAGTGCCACGGTGTAGGTGTTGTTGTCTTTaGGGGGCTTTCTTCGTGACACAAGCACCACAAAGTCCTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAQLTLVPRCRCCCL*GAFFVTQAPQSPWV Trigger: AACCCAAGGACTTTGTGGTGCTTGTGTCACGAAGAAAGCCCCTCAAAGACAACAACACCTACACCGTGGCACTAAGGTCAGTTGTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | TGGATTTTGACCAGCCACCAATATTGCCAGCAAAGTAAGGGAGGATaGTGTCTGACATCTGGTTCAGGTACGTTACGGTGCACGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: WILTSHQYCQQSKGG*CLTSGSGTLRCTNC Trigger: GCAATTCGTGCACCGTAACGTACCTGAACCAGATGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | AAGAGGCTGCAGCTTCCTCAATGGATTTTGACCAGCCACCAATATTaGCAGCAAAGTAAGGGAGGATGCTGTCTGACATCTGGTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRLQLPQWILTSHQY*QQSKGGCCLTSGSG Trigger: ACCTGAACCAGATGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGCAGCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 90 bp | ACTGGTTTAGCTACAAACGTAGAGAAAGCCACGCAGAGGAGCTTCTaGATGCCCGTGAACTTGTCCTGGACTATGACCTTGATACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGLATNVEKATQRSF*MPVNLSWTMTLILI Trigger: GATCAGTATCAAGGTCATAGTCCAGGACAAGTTCACGGGCATCCAGAAGCTCCTCTGCGTGGCTTTCTCTACGTTTGTAGCTAAACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 90 bp | ATCTGGTTCAGGTACGTTACGGTGCACGAATTGCTGTCGACAGCCTaGATGAGAAACCCAGCACAAATGACCTCACTTCTGATGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IWFRYVTVHELLSTA*MRNPAQMTSLLMYC Trigger: ACAGTACATCAGAAGTGAGGTCATTTGTGCTGGGTTTCTCATCCAGGCTGTCGACAGCAATTCGTGCACCGTAACGTACCTGAACCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | GACAAAGGTGTCTGCCGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCTGTTTCCGTGATGGTTaGCGTGGGGCGGAAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: DKGVCRPWTNIKHSSGFSCFRDG*RGAEGQ Trigger: TTGTCCTTCCGCCCCACGCAAACCATCACGGAAACA...GCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCGGCAGACACCTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 90 bp | AGGTCGCTTTGTGAGGTCAGACAAGAGATGATAAGCTATGTGGGCTaGACTGCCCACAAGCTTTTCAACCTTAACAGATATGGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLCEVRQEMISYVG*TAHKLFNLNRYGIL Trigger: CAAGATGCCATATCTGTTAAGGTTGAAAAGCTTGTGGGCAGTCCAGCCCACATAGCTTATCATCTCTTGTCTGACCTCACAAAGCGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | ATCACACTTTACAGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGATGAGAAAAGCGCTGTaGATGTGGCGGCCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITLYRCLACACIEIDTKLMRKAL*MWRPWP Trigger: GGGCCAAGGCCGCCACATCAACAGCGCTTTTCTCAT...CAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCTGTAAAGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 90 bp | CTCTATGAATTTTATACAAGAGGCTGCAGCTTCCTCAATGGATTTTaGCCAGCCACCAATATTGCCAGCAAAGTAAGGGAGGATGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYEFYTRGCSFLNGF*PATNIASKVREDAV Trigger: GACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGCAGCCTCTTGTATAAAATTCATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | GCTGGACTGCCCACAAGCTTTTCAACCTTAACAGATATGGCATCTTaGTCCTCCAGGGTATATATTTTTATCTTCTCCAAGGTGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGLPTSFSTLTDMAS*SSRVYIFIFSKVVV Trigger: TACCACCACCTTGGAGAAGATAAAAATATATACCCTGGAGGAGCAAGATGCCATATCTGTTAAGGTTGAAAAGCTTGTGGGCAGTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | AGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGGCCATCTACCTGTTGGATGCCAGATTTTaGAGAGCTTCCACATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLACACIEIDTKLAIYLLDARF*RASTLV Trigger: CACCAATGTGGAAGCTCTCAAAAATCTGGCATCCAA...CAGGTAGATGGCCAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 90 bp | CTTGATACTGATCTCCATGCTTGTGCTGAACGCCCTAGTCACTTTTaGTCTGATGGTAATAATTTGTCCAATTCTCGCTGTGTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDTDLHACAERPSHF*SDGNNLSNSRCVLK Trigger: TTTGAGGACACAGCGAGAATTGGACAAATTATTACCATCAGAGCAAAAGTGACTAGGGCGTTCAGCACAAGCATGGAGATCAGTATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | GTCTATGTCTCAAGTAAGCTGGCTAAAGTTACTCAAGTATTTCTGTTTCTGTTCTGGATGCCCGTGAACTaGTCCTGGACTATGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VYVSSKLAKVTQVFLFLFWMPVN*SWTMTL Trigger: CAAGGTCATAGTCCAGGACAAGTTCACGGGCATCCA...GAACAGAAACAGAAATACTTGAGTAACTTTAGCCAGCTTACTTGAGACATAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | CGCCCATGGACTAATATTAAACACTCATCAGGTTTTAGCCCACCATTTCACGTTCAGATTGTGCTCCACTaGTTCTTGCTCTGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPWTNIKHSSGFSPPFHVQIVLH*FLLCLK Trigger: CTTCAAACAGAGCAAGAACAAGTGGAGCACAATCTG...AACGTGAAATGGTGGGCTAAAACCTGATGAGTGTTTAATATTAGTCCATGGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGTAAAAGTCATCCTTTGAAGGAGGCTAACCTGACACATTCTGCTTGGTCTTTGAGAGCTTCCACATaGGTGTTACTTAGGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICKSHPLKEANLTHSAWSLRAST*VLLRDP Trigger: GGGATCCCTAAGTAACACCAATGTGGAAGCTCTCAA...AGACCAAGCAGAATGTGTCAGGTTAGCCTCCTTCAAAGGATGACTTTTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCAGCACCACAAAGTCCTaGGGTTTGTCTCCATTTACC | + |
|
Preference number: 5 (lower is better) Translates to: SKTKPTHIALKSLFISEVSTTKS*GLSPFT Trigger: GGTAAATGGAGACAAACCCAAGGACTTTGTGGTGCT...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | ATCACACTTTACAGGTGCTTGGCGTGTGCGTGTATAGAAATAGATACTAAATTGGGCGAAAATCGTCCTTaGAAATGGGTTGGATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ITLYRCLACACIEIDTKLGENRP*KWVGFW Trigger: CCAGAATCCAACCCATTTCAAAGGACGATTTTCGCC...CAATTTAGTATCTATTTCTATACACGCACACGCCAAGCACCTGTAAAGTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | TTGTGCCATCTTATAGATCATGTGATATCGTATCCAGGCAATTTCCAAGTGTCATCCTGGACTATGACCTaGATACTGATCTCCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCHLIDHVISYPGNFQVSSWTMT*ILISML Trigger: AAGCATGGAGATCAGTATCAAGGTCATAGTCCAGGA...TGACACTTGGAAATTGCCTGGATACGATATCACATGATCTATAAGATGGCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS-3UTR CAA 90 bp | TCAAAGACCAAGCCTACGCATATAGCACTTAAAAGCCTCTTCATTTCAGAAGTCTCCTTCATAATGTTGTaGAAGGTGTTCTCATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKTKPTHIALKSLFISEVSFIML*KVFSCC Trigger: GCAGCATGAGAACACCTTCAACAACATTATGAAGGA...GACTTCTGAAATGAAGAGGCTTTTAAGTGCTATATGCGTAGGCTTGGTCTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | AGCTGCCCTGCGCTCAGCTCGCCGCGGGAGTCGGCATaGGCCGGCTGGATGGCCTGGCTCATGAGCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCPALSSPRESA*AGWMAWLMSTS Trigger: TGAGGTGCTCATGAGCCAGGCCATCCAGCCGGCTCATGCCGACTCCCGCGGCGAGCTGAGCGCAGGGCAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | TTTCGGCCGCCAGGCAAGCGGTGGTGTCCATCCACTTaGGCAGCTGCCCTGCGCTCAGCTCGCCGCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FRPPGKRWCPST*AAALRSARRGS Trigger: ACTCCCGCGGCGAGCTGAGCGCAGGGCAGCTGCTCAAGTGGATGGACACCACCGCTTGCCTGGCGGCCGAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | CTGTTGATGTGGCGGCCTTGGCCCTCGGCCCACTCCTaGCAGTCAAAGGCCTCAACACGCACTCCGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLMWRPWPSAHS*QSKASTRTPTS Trigger: GGAAGTCGGAGTGCGTGTTGAGGCCTTTGACTGTCAGGAGTGGGCCGAGGGCCAAGGCCGCCACATCAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | CGTGATGGTTTGCGTGGGGCGGAAGGACAAGCTCGATaGTCTGGACAGAGGTGCCCATGGTGGTGGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RDGLRGAEGQAR*SGQRCPWWWPF Trigger: GAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTCCGCCCCACGCAAACCATCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | TGGTTTGCGTGGGGCGGAAGGACAAGCTCGATGCTCTaGACAGAGGTGCCCATGGTGGTGGCCGTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WFAWGGRTSSML*TEVPMVVAVPS Trigger: AGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTCCGCCCCACGCAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | TCATCCATGGAGGCTGTGACACAGGAAATCCCAGCATaGTTTTCGGCCGCCAGGCAAGCGGTGGTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSMEAVTQEIPA*FSAARQAVVSI Trigger: GATGGACACCACCGCTTGCCTGGCGGCCGAAAAGCATGCTGGGATTTCCTGTGTCACAGCCTCCATGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | GGGGCGGAAGGACAAGCTCGATGCTCTGGACAGAGGTaGCCATGGTGGTGGCCGTTCCTTCTTCTTCATTAC | + |
|
Preference number: 6 (lower is better) Translates to: GAEGQARCSGQR*PWWWPFLLLHY Trigger: GTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTCCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | ATTGTAAATGAGAAAAGCGCTGTTGATGTGGCGGCCTaGGCCCTCGGCCCACTCCTGACAGTCAAAGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IVNEKSAVDVAA*ALGPLLTVKGL Trigger: GAGGCCTTTGACTGTCAGGAGTGGGCCGAGGGCCAAGGCCGCCACATCAACAGCGCTTTTCTCATTTACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | ATCAACAGCATTGTAAATGAGAAAAGCGCTGTTGATGTGGCGGCCTaGGCCCTCGGCCCACTCCTGACAGTCAAAGGCCTCAACACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: INSIVNEKSAVDVAA*ALGPLLTVKGLNTH Trigger: GTGCGTGTTGAGGCCTTTGACTGTCAGGAGTGGGCCGAGGGCCAAGGCCGCCACATCAACAGCGCTTTTCTCATTTACAATGCTGTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | CTGTGTCCTCAAACAGAATGTCATCCATGGAGGCTGTaGCACAGGAAATCCCAGCATGCTTTTCGGCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCPQTECHPWRL*HRKSQHAFRPP Trigger: TGGCGGCCGAAAAGCATGCTGGGATTTCCTGTGTCACAGCCTCCATGGATGACATTCTGTTTGAGGACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | GCTACAAACGTAGAGAAAGCCACGCAGAGGAGCTTCTaGATGCCCGTGAACTTGTCCTGGACTATGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATNVEKATQRSF*MPVNLSWTMTL Trigger: CAAGGTCATAGTCCAGGACAAGTTCACGGGCATCCAGAAGCTCCTCTGCGTGGCTTTCTCTACGTTTGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | CAAGCTCGATGCTCTGGACAGAGGTGCCCATGGTGGTaGCCGTTCCTTCTTCTTCATTACAAATGGAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: QARCSGQRCPWW*PFLLLHYKWNR Trigger: GCGATTCCATTTGTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | GAAGGACAAGCTCGATGCTCTGGACAGAGGTGCCCATaGTGGTGGCCGTTCCTTCTTCTTCATTACAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: EGQARCSGQRCP*WWPFLLLHYKW Trigger: CCATTTGTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | AACGTAGAGAAAGCCACGCAGAGGAGCTTCTGGATGCCCGTGAACTaGTCCTGGACTATGACCTTGATACTGATCTCCATGCTTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NVEKATQRSFWMPVN*SWTMTLILISMLVL Trigger: CAGCACAAGCATGGAGATCAGTATCAAGGTCATAGTCCAGGACAAGTTCACGGGCATCCAGAAGCTCCTCTGCGTGGCTTTCTCTACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | AGGATGCTGTCTGACATCTGGTTCAGGTACGTTACGGTGCACGAATaGCTGTCGACAGCCTGGATGAGAAACCCAGCACAAATGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMLSDIWFRYVTVHE*LSTAWMRNPAQMTS Trigger: TGAGGTCATTTGTGCTGGGTTTCTCATCCAGGCTGTCGACAGCAATTCGTGCACCGTAACGTACCTGAACCAGATGTCAGACAGCATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | ACCAGCCACCAATATTGCCAGCAAAGTAAGGGAGGATaGTGTCTGACATCTGGTTCAGGTACGTTACGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSHQYCQQSKGG*CLTSGSGTLRC Trigger: GCACCGTAACGTACCTGAACCAGATGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | GGACAAGCTCGATGCTCTGGACAGAGGTGCCCATGGTaGTGGCCGTTCCTTCTTCTTCATTACAAATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GQARCSGQRCPW*WPFLLLHYKWN Trigger: ATTCCATTTGTAATGAAGAAGAAGGAACGGCCACCACCATGGGCACCTCTGTCCAGAGCATCGAGCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | CATATTTCCTGCCTAGGCGAATTCTCCTCCGTGCGATaGCTCCCTGGTAACGGCGAAAATCGTCCTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: HISCLGEFSSVR*LPGNGENRPLK Trigger: TTTCAAAGGACGATTTTCGCCGTTACCAGGGAGCCATCGCACGGAGGAGAATTCGCCTAGGCAGGAAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | AGGTACGTTACGGTGCACGAATTGCTGTCGACAGCCTaGATGAGAAACCCAGCACAAATGACCTCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RYVTVHELLSTA*MRNPAQMTSLL Trigger: CAGAAGTGAGGTCATTTGTGCTGGGTTTCTCATCCAGGCTGTCGACAGCAATTCGTGCACCGTAACGTACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | TTGCAGAAATGGTGGCGACTGTCTCCATCCATGCCATaGTCTGGCCACCAAATGTGTTTCCGTGATGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQKWWRLSPSMP*SGHQMCFRDGL Trigger: CAAACCATCACGGAAACACATTTGGTGGCCAGATCATGGCATGGATGGAGACAGTCGCCACCATTTCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | AAGGCCTCAACACGCACTCCGACTTCCACACTGTTCTaGAAGGTGTTGTTGACTATGGCACTGAAGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KASTRTPTSTLF*KVLLTMALKTR Trigger: CCTTGTCTTCAGTGCCATAGTCAACAACACCTTTCAGAACAGTGTGGAAGTCGGAGTGCGTGTTGAGGCCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | CTGACCTTAGTGCCACGGTGTAGGTGTTGTTGTCTTTaGGGGGCTTTCTTCGTGACACAAGCACCACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LTLVPRCRCCCL*GAFFVTQAPQS Trigger: ACTTTGTGGTGCTTGTGTCACGAAGAAAGCCCCTCAAAGACAACAACACCTACACCGTGGCACTAAGGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | TTCTGGATGCCCGTGAACTTGTCCTGGACTATGACCTaGATACTGATCTCCATGCTTGTGCTGAACGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: FWMPVNLSWTMT*ILISMLVLNAL Trigger: TAGGGCGTTCAGCACAAGCATGGAGATCAGTATCAAGGTCATAGTCCAGGACAAGTTCACGGGCATCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | AGTCCTTGGGTTTGTCTCCATTTACCACCGAGCAAGTaGTGTAATATATCTGATCGTCCTCGCTCACCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPWVCLHLPPSK*CNISDRPRSPG Trigger: ACCAGGTGAGCGAGGACGATCAGATATATTACATCACTTGCTCGGTGGTAAATGGAGACAAACCCAAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | ACCAATATTGCCAGCAAAGTAAGGGAGGATGCTGTCTaGCATCTGGTTCAGGTACGTTACGGTGCACGAATT | + |
|
Preference number: 6 (lower is better) Translates to: TNIASKVREDAV*HLVQVRYGARI Trigger: AATTCGTGCACCGTAACGTACCTGAACCAGATGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | CAGCTTCCTCAATGGATTTTGACCAGCCACCAATATTaGCAGCAAAGTAAGGGAGGATGCTGTCTGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: QLPQWILTSHQY*QQSKGGCCLTS Trigger: AGATGTCAGACAGCATCCTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | GAATCGCTGAACCTGCTGCTCTCCTTCATAATGTTGTaGAAGGTGTTCTCATGCTGCAGTCGGACTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESLNLLLSFIML*KVFSCCSRTFL Trigger: AAGGAAAGTCCGACTGCAGCATGAGAACACCTTCAACAACATTATGAAGGAGAGCAGCAGGTTCAGCGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | GTGGTAATCTCCCAACCGCTTTTGGATGCCAGATTTTaGAGAGCTTCCACATTGGTGTTACTTAGGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVISQPLLDARF*RASTLVLLRDP Trigger: GGGATCCCTAAGTAACACCAATGTGGAAGCTCTCAAAAATCTGGCATCCAAAAGCGGTTGGGAGATTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | GGCTGGACTGCCCACAAGCTTTTCAACCTTAACAGATATGGCATCTaGCTCCTCCAGGGTATATATTTTTATCTTCTCCAAGGTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWTAHKLFNLNRYGI*LLQGIYFYLLQGGG Trigger: ACCACCACCTTGGAGAAGATAAAAATATATACCCTGGAGGAGCAAGATGCCATATCTGTTAAGGTTGAAAAGCTTGTGGGCAGTCCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | AAGATATGTAATGGGGGTCCCATAAAGGTCGCTTTGTaGGGTCAGACAAGAGATGATAAGCTATGTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KICNGGPIKVAL*GQTRDDKLCGL Trigger: CAGCCCACATAGCTTATCATCTCTTGTCTGACCTCACAAAGCGACCTTTATGGGACCCCCATTACATATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | GCTTGTGCTGAACGCCCTAGTCACTTTTGCTCTGATGGTAATAATTaGTCCAATTCTCGCTGTGTCCTCAAACAGAATGTCATCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACAERPSHFCSDGNN*SNSRCVLKQNVIHG Trigger: TCCATGGATGACATTCTGTTTGAGGACACAGCGAGAATTGGACAAATTATTACCATCAGAGCAAAAGTGACTAGGGCGTTCAGCACAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 90 bp | CCCTTTTTGCTTATATCCCACTGTGCACTGAGTGGAACTTCTTTCTaGTGGGAAATAACATATTTCCTGCCTAGGCGAATTCTCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PFLLISHCALSGTSF*WEITYFLPRRILLR Trigger: ACGGAGGAGAATTCGCCTAGGCAGGAAATATGTTATTTCCCACAAGAAAGAAGTTCCACTCAGTGCACAGTGGGATATAAGCAAAAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS TCA 72 bp | TTTTATACAAGAGGCTGCAGCTTCCTCAATGGATTTTaGCCAGCCACCAATATTGCCAGCAAAGTAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FYTRGCSFLNGF*PATNIASKVRE Trigger: CTCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGCAGCCTCTTGTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS GCA 72 bp | GATCTCCATGCTTGTGCTGAACGCCCTAGTCACTTTTaGTCTGATGGTAATAATTTGTCCAATTCTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DLHACAERPSHF*SDGNNLSNSRC Trigger: ACAGCGAGAATTGGACAAATTATTACCATCAGAGCAAAAGTGACTAGGGCGTTCAGCACAAGCATGGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | TGTGAGGTCAGACAAGAGATGATAAGCTATGTGGGCTaGACTGCCCACAAGCTTTTCAACCTTAACAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: CEVRQEMISYVG*TAHKLFNLNRY Trigger: ATATCTGTTAAGGTTGAAAAGCTTGTGGGCAGTCCAGCCCACATAGCTTATCATCTCTTGTCTGACCTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | AGAGCTTCCACATTGGTGTTACTTAGGGATCCCTTTTaGCTTATATCCCACTGTGCACTGAGTGGAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RASTLVLLRDPF*LISHCALSGTS Trigger: AGAAGTTCCACTCAGTGCACAGTGGGATATAAGCAAAAAGGGATCCCTAAGTAACACCAATGTGGAAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | GAACGCCCTAGTCACTTTTGCTCTGATGGTAATAATTaGTCCAATTCTCGCTGTGTCCTCAAACAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERPSHFCSDGNN*SNSRCVLKQNV Trigger: GACATTCTGTTTGAGGACACAGCGAGAATTGGACAAATTATTACCATCAGAGCAAAAGTGACTAGGGCGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | ATTTTATACAAGAGGCTGCAGCTTCCTCAATGGATTTaGACCAGCCACCAATATTGCCAGCAAAGTAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ILYKRLQLPQWI*TSHQYCQQSKG Trigger: TCCCTTACTTTGCTGGCAATATTGGTGGCTGGTCAAAATCCATTGAGGAAGCTGCAGCCTCTTGTATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CAA 72 bp | CTTATATCCCACTGTGCACTGAGTGGAACTTCTTTCTaGTGGGAAATAACATATTTCCTGCCTAGGCGAATT | + |
|
Preference number: 6 (lower is better) Translates to: LISHCALSGTSF*WEITYFLPRRI Trigger: AATTCGCCTAGGCAGGAAATATGTTATTTCCCACAAGAAAGAAGTTCCACTCAGTGCACAGTGGGATATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||
| CDS CCA 72 bp | GGATCCCTTTTTGCTTATATCCCACTGTGCACTGAGTaGAACTTCTTTCTTGTGGGAAATAACATATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLFAYIPLCTE*NFFLVGNNIFP Trigger: AGGAAATATGTTATTTCCCACAAGAAAGAAGTTCCACTCAGTGCACAGTGGGATATAAGCAAAAAGGGATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022120.5 |
||