RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOT11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034853

Ensembl transcript IDs: ENSMUST00000065253.13, ENSMUST00000102762.10, ENSMUST00000140541.8, ENSMUST00000145061.8, ENSMUST00000148688.2, ENSMUST00000156567.2

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCAGGCTGGGCCACTaGGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: RDSGNLCPSSCRLGH*VRVQPTLWPGSWPP
Trigger: AGGAGGCCAGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGCCCAGCCTGCAGCTGGAAGGACACAGGTTGCCGGAGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp GCTGTGTCAGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCAGGCTaGGCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCT +
Preference number: 1 (lower is better)
Translates to: AVSGTPATCVLPAAG*ATESESSQHCGQAP
Trigger: AGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGCCCAGCCTGCAGCTGGAAGGACACAGGTTGCCGGAGTCCCTGACACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp TCCAGGACCACGAAGGTCATGAAGGCGCTGTTGATGTGCCGGCGCTaGGTCTCAGCTTCCTGGCGGTACGCCTCCACACACACACCCACC +
Preference number: 1 (lower is better)
Translates to: SRTTKVMKALLMCRR*VSASWRYASTHTPT
Trigger: GGTGGGTGTGTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp GTCACAGTGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTaGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTC +
Preference number: 1 (lower is better)
Translates to: VTVYHSTAGNSHVDL*AGLWAARAVDRTRV
Trigger: GACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp GCGCTCAGCCGCCACCCCATGTTCAGTCTTCTCCTCCTCGGTCAATaGGATGACCTGCTTCAGCTTCACCTTGGAGAGCTCCCGGTGGGC +
Preference number: 1 (lower is better)
Translates to: ALSRHPMFSLLLLGQ*DDLLQLHLGELPVG
Trigger: GCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGCGGCTGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR TCA 90 bp CGCCGTTCACCCTCTCCAGGCTGGGGACGAATCCAGGGCAGCTTCTaGGGCTGGTCATCTTTGTCCAGGACCACGAAGGTCATGAAGGCG +
Preference number: 1 (lower is better)
Translates to: RRSPSPGWGRIQGSF*GWSSLSRTTKVMKA
Trigger: CGCCTTCATGACCTTCGTGGTCCTGGACAAAGATGACCAGCCTCAGAAGCTGCCCTGGATTCGTCCCCAGCCTGGAGAGGGTGAACGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp GAGCCACTGTCACAGTGTACCACAGCACTGCTGGGAACAGCCATGTaGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGGA +
Preference number: 1 (lower is better)
Translates to: EPLSQCTTALLGTAM*ICGLDCGRPGPWTG
Trigger: TCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACTGTGACAGTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp GTCATGAAGGCGCTGTTGATGTGCCGGCGCTGGGTCTCAGCTTCCTaGCGGTACGCCTCCACACACACACCCACCTCCATGCTGTGCTTA +
Preference number: 1 (lower is better)
Translates to: VMKALLMCRRWVSAS*RYASTHTPTSMLCL
Trigger: TAAGCACAGCATGGAGGTGGGTGTGTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp CCCTCACGCCACAGACAGAAGCCTGAACAGAGAGTCTCCCCACGTTaGTATTCCGGTGTCTCATGGTGCGTGGGCAGCGTGACCGACCTC +
Preference number: 1 (lower is better)
Translates to: PSRHRQKPEQRVSPR*YSGVSWCVGSVTDL
Trigger: GAGGTCGGTCACGCTGCCCACGCACCATGAGACACCGGAATACCAACGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTGGCGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 90 bp CAGCCGCCACCCCATGTTCAGTCTTCTCCTCCTCGGTCAATGGGATaGCCTGCTTCAGCTTCACCTTGGAGAGCTCCCGGTGGGCCACAA +
Preference number: 1 (lower is better)
Translates to: QPPPHVQSSPPRSMG*PASASPWRAPGGPQ
Trigger: TTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR GCA 90 bp TCCCGGTGGGCCACAAAGGTGGCCAAGGCCTTGCAGACACTCCACTaGTTCTCAGAGCACAGATCCTCAGAGACCACCTGGATTCCCACC +
Preference number: 1 (lower is better)
Translates to: SRWATKVAKALQTLH*FSEHRSSETTWIPT
Trigger: GGTGGGAATCCAGGTGGTCTCTGAGGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 90 bp TCATCTTTGTCCAGGACCACGAAGGTCATGAAGGCGCTGTTGATGTaGCGGCGCTGGGTCTCAGCTTCCTGGCGGTACGCCTCCACACAC +
Preference number: 1 (lower is better)
Translates to: SSLSRTTKVMKALLM*RRWVSASWRYASTH
Trigger: GTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGACAAAGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 90 bp GCACCAGCTCCACACTCCGGTAATGCTTGTCCCACTCTGGTCTCCTaGGCAGGTCTGACAGCAGCTGAAAGACCTGGGCGGCATCCACAT +
Preference number: 1 (lower is better)
Translates to: APAPHSGNACPTLVS*AGLTAAERPGRHPH
Trigger: ATGTGGATGCCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGCATTACCGGAGTGTGGAGCTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 90 bp GCCACCCCATGTTCAGTCTTCTCCTCCTCGGTCAATGGGATGACCTaGTTCAGCTTCACCTTGGAGAGCTCCCGGTGGGCCACAAAGGTG +
Preference number: 1 (lower is better)
Translates to: ATPCSVFSSSVNGMT*FSFTLESSRWATKV
Trigger: CACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR CCA 90 bp CACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTaGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGATA +
Preference number: 1 (lower is better)
Translates to: HSTAGNSHVDLWAGL*AARAVDRTRVYYRI
Trigger: TATCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp AGTGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTaGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTA +
Preference number: 1 (lower is better)
Translates to: SVPQHCWEQPCGFVG*IVGGQGRGQDPSLL
Trigger: TAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp CCTGTCTTGTCGCAGTTTAAGCAGCTGGCCTGTAAGAAGGGAGCCTaGGAGGGGAATTGTGGGCTGTGTTCTGCTCAGGGCAGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: PVLSQFKQLACKKGA*EGNCGLCSAQGSLG
Trigger: CCCAAGGCTGCCCTGAGCAGAACACAGCCCACAATTCCCCTCCCAGGCTCCCTTCTTACAGGCCAGCTGCTTAAACTGCGACAAGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp CCTGCTTCAGCTTCACCTTGGAGAGCTCCCGGTGGGCCACAAAGGTaGCCAAGGCCTTGCAGACACTCCACTGCTTCTCAGAGCACAGAT +
Preference number: 1 (lower is better)
Translates to: PASASPWRAPGGPQR*PRPCRHSTASQSTD
Trigger: ATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR TCA 90 bp AGAGCCGGCTGGCTGCAATGGTGGCCACATTCTCCATCCAAGCCATaGTCTGTCCCCCGAAGGTATTGCCCTGATGATTGGCGTGAGGAG +
Preference number: 1 (lower is better)
Translates to: RAGWLQWWPHSPSKP*SVPRRYCPDDWREE
Trigger: CTCCTCACGCCAATCATCAGGGCAATACCTTCGGGGGACAGATCATGGCTTGGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 90 bp AAGGCGTTATTCACGATGGCCTTGAGCACCAGACGGTCCCCCACCTaGGACGGGCCTCGGAAATGGAACATCTCGATGGCCTTGAGCGTA +
Preference number: 1 (lower is better)
Translates to: KALFTMALSTRRSPT*DGPRKWNISMALSV
Trigger: TACGCTCAAGGCCATCGAGATGTTCCATTTCCGAGGCCCGTCTCAGGTGGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATAACGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp ACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTaGACAGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGA +
Preference number: 1 (lower is better)
Translates to: TAMWICGLDCGRPGP*TGPESITGYPRSTG
Trigger: TCCAGTACTCCTGGGATATCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp ACGTTAGCACACCTTTCTACCCTTGGCCATCTGCCCTGGCCTGTGTaGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: TLAHLSTLGHLPWPV*VGSTVSHGSFVVPG
Trigger: GCCAGGGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAGAAAGGTGTGCTAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp TCCCTGGCCACGTTAGCACACCTTTCTACCCTTGGCCATCTGCCCTaGCCTGTGTGGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTG +
Preference number: 1 (lower is better)
Translates to: SLATLAHLSTLGHLP*PVWVGSTVSHGSFV
Trigger: CACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAGAAAGGTGTGCTAACGTGGCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 90 bp GGGAATTGTGGGCTGTGTTCTGCTCAGGGCAGCCTTGGGTGGGCATaGAAGCGGAGAAAGGGTGGTCTAGATGGGGAAAATTCTGCGTGG +
Preference number: 1 (lower is better)
Translates to: GNCGLCSAQGSLGWA*KRRKGGLDGENSAW
Trigger: CCACGCAGAATTTTCCCCATCTAGACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCCTGAGCAGAACACAGCCCACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp GTGCACATCCTCCTGCCCTCTGAACCTCCGCTCTCCATCATCCTCTaGTGGGAATCTAGAGAACAGATGCTCCACTCCTGGGCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: VHILLPSEPPLSIIL*WESREQMLHSWAQL
Trigger: CAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATTCCCACCAGAGGATGATGGAGAGCGGAGGTTCAGAGGGCAGGAGGATGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp AGGACACAAGGTATTTCCTGTCCAGGCGGATCTTCTTCCTGGCACTaGCTTCTCGGTATCGCCGTTCACCCTCTCCAGGCTGGGGACGAA +
Preference number: 1 (lower is better)
Translates to: RTQGISCPGGSSSWH*LLGIAVHPLQAGDE
Trigger: TTCGTCCCCAGCCTGGAGAGGGTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAATACCTTGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp GCTTACAGGACACAAGGTATTTCCTGTCCAGGCGGATCTTCTTCCTaGCACTGGCTTCTCGGTATCGCCGTTCACCCTCTCCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: AYRTQGISCPGGSSS*HWLLGIAVHPLQAG
Trigger: CCCAGCCTGGAGAGGGTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAATACCTTGTGTCCTGTAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 90 bp CACACTCCGGTAATGCTTGTCCCACTCTGGTCTCCTGCGCAGGTCTaGCAGCAGCTGAAAGACCTGGGCGGCATCCACATTTACCACCAT +
Preference number: 1 (lower is better)
Translates to: HTPVMLVPLWSPAQV*QQLKDLGGIHIYHH
Trigger: ATGGTGGTAAATGTGGATGCCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGCATTACCGGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 90 bp GGCAGTGGGAGAAGAGCAGCCATTACAGTTCCTGGTGAGTCTGCCTaGAGCTCTAAAGCTCCTGGCTACCCTCACCCACAGGTCTGTCAT +
Preference number: 1 (lower is better)
Translates to: GSGRRAAITVPGESA*SSKAPGYPHPQVCH
Trigger: ATGACAGACCTGTGGGTGAGGGTAGCCAGGAGCTTTAGAGCTGCAGGCAGACTCACCAGGAACTGTAATGGCTGCTCTTCTCCCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 90 bp ACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCCTaGTTACAGGACACAAGGTATTTCCTGTCCAGGCGGATCTTCTTC +
Preference number: 1 (lower is better)
Translates to: TWLLGSQGTDRATSA*LQDTRYFLSRRIFF
Trigger: GAAGAAGATCCGCCTGGACAGGAAATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp CTCCTATTGAGGGAGTTGTGCCTGGGAAAGGGAGGAGACAAGCTTTaGAGCCCCCTCCCCTCATCTCTAGCTCTGTTTGGTTTCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LLLRELCLGKGGDKL*SPLPSSLALFGFWP
Trigger: GGGCCAGAAACCAAACAGAGCTAGAGATGAGGGGAGGGGGCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 90 bp ATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTGCCTaGGAGTCACCAGTCACAGCACTTGGAGCCTGGGATGGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: IRKAKNGGQQFVMPA*ESPVTALGAWDGAG
Trigger: GCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR GCA 90 bp CACTGCTTCCATTGGTGGGTAACTCAGAAACAGACATCCCAGGGGTaGACATCCTCCTGCCCTCTGAACCTCCGCTCTCCATCATCCTCT +
Preference number: 1 (lower is better)
Translates to: HCFHWWVTQKQTSQG*TSSCPLNLRSPSSS
Trigger: AGAGGATGATGGAGAGCGGAGGTTCAGAGGGCAGGAGGATGTGCACCCCTGGGATGTCTGTTTCTGAGTTACCCACCAATGGAAGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 90 bp GTATACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTaGCTGCTTACAGGACACAAGGTATTTCCTGTCCAGGCGGATCTT +
Preference number: 1 (lower is better)
Translates to: VYLVARVPGDRQGHF*LLTGHKVFPVQADL
Trigger: AAGATCCGCCTGGACAGGAAATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 90 bp CATGCCTGCCTGAGAGTCACCAGTCACAGCACTTGGAGCCTGGGATaGAGCTGGCAAACTCAAGAATGGCTGGTGCCTCTTGATCTATCC +
Preference number: 1 (lower is better)
Translates to: HACLRVTSHSTWSLG*SWQTQEWLVPLDLS
Trigger: GGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CCA 90 bp TCTGGTGGGAATCTAGAGAACAGATGCTCCACTCCTGGGCTCAGCTaGCATTCAGTTCTGAGCGCACAAGTAGAGCCAAGAGTCAGGCGG +
Preference number: 1 (lower is better)
Translates to: SGGNLENRCSTPGLS*HSVLSAQVEPRVRR
Trigger: CCGCCTGACTCTTGGCTCTACTTGTGCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATTCCCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 90 bp AGAAACCTTAGTCATCTGGTCCCCCTCACGCCACAGACAGAAGCCTaGACAGAGAGTCTCCCCACGTTGGTATTCCGGTGTCTCATGGTG +
Preference number: 1 (lower is better)
Translates to: RNLSHLVPLTPQTEA*TESLPTLVFRCLMV
Trigger: CACCATGAGACACCGGAATACCAACGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTGGCGTGAGGGGGACCAGATGACTAAGGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 90 bp AAGGGAGAAGTGACAGCCACAGGGCTTAGGATGCGGGAGAGCCAGTaGATACACAAGGCAATTTGTGGAGAGTGGTCCCTTCACATTGGC +
Preference number: 1 (lower is better)
Translates to: KGEVTATGLRMRESQ*IHKAICGEWSLHIG
Trigger: GCCAATGTGAAGGGACCACTCTCCACAAATTGCCTTGTGTATGCACTGGCTCTCCCGCATCCTAAGCCCTGTGGCTGTCACTTCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 90 bp AACCTCCGCTCTCCATCATCCTCTGGTGGGAATCTAGAGAACAGATaGTCCACTCCTGGGCTCAGCTGGCATTCAGTTCTGAGCGCACAA +
Preference number: 1 (lower is better)
Translates to: NLRSPSSSGGNLENR*STPGLSWHSVLSAQ
Trigger: TTGTGCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATTCCCACCAGAGGATGATGGAGAGCGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp ACAGCACTTGGAGCCTGGGATGGAGCTGGCAAACTCAAGAATGGCTaGTGCCTCTTGATCTATCCCCATGACATGCCCCCATGTATGTCC +
Preference number: 1 (lower is better)
Translates to: TALGAWDGAGKLKNG*CLLIYPHDMPPCMS
Trigger: GGACATACATGGGGGCATGTCATGGGGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CCA 90 bp ACCTCCTATGCTCGGCCTCTGGCTTGTACTCTTCTGGGCACTGGCTaGTCACTGCTTCCATTGGTGGGTAACTCAGAAACAGACATCCCA +
Preference number: 1 (lower is better)
Translates to: TSYARPLACTLLGTG*SLLPLVGNSETDIP
Trigger: TGGGATGTCTGTTTCTGAGTTACCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACAAGCCAGAGGCCGAGCATAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp CTCTTTATGTGCCTCAGTTGCCAAACAGCACATACACCCAAGCCATaGTGGAAACAATGCAGGAGCTGGTCGGAGCGCTGCCACAGAAGG +
Preference number: 1 (lower is better)
Translates to: LFMCLSCQTAHTPKP*WKQCRSWSERCHRR
Trigger: CCTTCTGTGGCAGCGCTCCGACCAGCTCCTGCATTGTTTCCACCATGGCTTGGGTGTATGTGCTGTTTGGCAACTGAGGCACATAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp TCCATCATCCTCTGGTGGGAATCTAGAGAACAGATGCTCCACTCCTaGGCTCAGCTGGCATTCAGTTCTGAGCGCACAAGTAGAGCCAAG +
Preference number: 1 (lower is better)
Translates to: SIILWWESREQMLHS*AQLAFSSERTSRAK
Trigger: CTTGGCTCTACTTGTGCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATTCCCACCAGAGGATGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 90 bp TCAGGCCATGAGACAATGACTTCCAATCTACCCAAAAGGGAGAAGTaGCAGCCACAGGGCTTAGGATGCGGGAGAGCCAGTGCATACACA +
Preference number: 1 (lower is better)
Translates to: SGHETMTSNLPKREK*QPQGLGCGRASAYT
Trigger: TGTGTATGCACTGGCTCTCCCGCATCCTAAGCCCTGTGGCTGTCACTTCTCCCTTTTGGGTAGATTGGAAGTCATTGTCTCATGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 90 bp TGTCGCTGTGGCAAGAGCCTACAAGAAGGGAAAGATGGGTATCTCTaGTCTGGTCTCTCTCTGCAGGTTTCTGACTCTTGTCCAGGAGAA +
Preference number: 1 (lower is better)
Translates to: CRCGKSLQEGKDGYL*SGLSLQVSDSCPGE
Trigger: TTCTCCTGGACAAGAGTCAGAAACCTGCAGAGAGAGACCAGAGCAGAGATACCCATCTTTCCCTTCTTGTAGGCTCTTGCCACAGCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 90 bp AGGATTGGACCATCTAGTGTGGAAGGCTTCCCTGGGGAGTCAAGGTaGATAAATGTCTCTGCTTTGTTCCACGCACTGTGTAAGACCTGG +
Preference number: 1 (lower is better)
Translates to: RIGPSSVEGFPGESR*INVSALFHALCKTW
Trigger: CCAGGTCTTACACAGTGCGTGGAACAAAGCAGAGACATTTATTCACCTTGACTCCCCAGGGAAGCCTTCCACACTAGATGGTCCAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 90 bp ATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTaGGCAGCAACCGACCATCCAGTAGGATTGGACCATCTAGTGTGG +
Preference number: 1 (lower is better)
Translates to: ITGYPRSTGKTCRQM*AATDHPVGLDHLVW
Trigger: CCACACTAGATGGTCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 90 bp GAGCTAGGTCATTCCGGTTGTCCAACAGAAAACTCTCACAAGCCTTaGAAGTGTTGTAGAATTCTGAGGACAGGCCGGACACATTGGTGG +
Preference number: 1 (lower is better)
Translates to: ELGHSGCPTENSHKP*KCCRILRTGRTHWW
Trigger: CCACCAATGTGTCCGGCCTGTCCTCAGAATTCTACAACACTTTCAAGGCTTGTGAGAGTTTTCTGTTGGACAACCGGAATGACCTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 90 bp GTTTCTGGCCCAGTAAATTCTGTTGAATGTCAGGCCATGAGACAATaGCTTCCAATCTACCCAAAAGGGAGAAGTGACAGCCACAGGGCT +
Preference number: 1 (lower is better)
Translates to: VSGPVNSVECQAMRQ*LPIYPKGRSDSHRA
Trigger: AGCCCTGTGGCTGTCACTTCTCCCTTTTGGGTAGATTGGAAGTCATTGTCTCATGGCCTGACATTCAACAGAATTTACTGGGCCAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 90 bp ATTCATCTTGTAAGTATAGAAACTATCTTTGAAAGGTTAAATGAATaGTCTAAGTCTACAAAACGGCAGAGCAAAGGTTCCCACAGGTCT +
Preference number: 1 (lower is better)
Translates to: IHLVSIETIFERLNE*SKSTKRQSKGSHRS
Trigger: AGACCTGTGGGAACCTTTGCTCTGCCGTTTTGTAGACTTAGACCATTCATTTAACCTTTCAAAGATAGTTTCTATACTTACAAGATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CCTGAGGCTGGGAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGGGGCGGCCAGGGCCGTaGACAGGACCCGAGTCTATT +
Preference number: 2 (lower is better)
Translates to: PEAGNPVPILHTPGGPALGRPGP*TGPESI
Trigger: AATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCC...CAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTCCCAGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGGAGTCGTGTCTGCTGCGTCTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGTTGTGGGCTGGATTGTaGGCGGCCAGGGCCGTGGAC +
Preference number: 2 (lower is better)
Translates to: WSRVCCVWLFTPGAGASMLWAGL*AARAVD
Trigger: GTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAA...CATGGATGCCCCAGCGCCTGGGGTGAACAGCCAGACGCAGCAGACACGACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR TCA 90 bp CCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTCAGTCTTCTCCTCCTCCTCCATGCTGGAGTTaGAGGCCCGGTTCACCTTGG +
Preference number: 2 (lower is better)
Translates to: PVAYAGAQPPPHVQSSPPPPCWS*RPGSPW
Trigger: CCAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGG...AGGAGGAGAAGACTGAACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp CAGGCGGACCTCGCTGATCTCCACGGACAGCACCCAGTTGTCCTTGGCCATGAGCTACCCTTGGCCATCTaGCCTGGCCTGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: QADLADLHGQHPVVLGHELPLAI*PGLCGW
Trigger: CCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAG...CTCATGGCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGGTATTCCGGTGTCTCATGGTGCGTGGGCAGCGTGACCGACCTCAGGGCAATGTTGTGGGCTGGATTGTaGGCGGCCAGGGCCGTGGAC +
Preference number: 2 (lower is better)
Translates to: WYSGVSWCVGSVTDLRAMLWAGL*AARAVD
Trigger: GTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAA...CATTGCCCTGAGGTCGGTCACGCTGCCCACGCACCATGAGACACCGGAATACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCCTGTGGCCAGGCTCCTaGCCTCCTCCCCTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVLWPGS*PPPLEP
Trigger: TGGCTCTAGGGGAGGAGGCCAGGAGCCTGGCCACAG...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GCTGGAGCTGTGTCAGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCAGGCTGGTTGGAGAGCTCCCGGTaGGCCACAAAGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: AGAVSGTPATCVLPAAGWLESSR*ATKVAK
Trigger: CTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAA...CCAGCCTGCAGCTGGAAGGACACAGGTTGCCGGAGTCCCTGACACAGCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CAA 90 bp GGCTGGTCATCTTTGTCCAGGACCACGAAGGTCATGAAGGCGCTGTaGATGTGCCGGCGCTGGGTCTCAGCTTCCTGGCGGTACGCCTCC +
Preference number: 2 (lower is better)
Translates to: GWSSLSRTTKVMKAL*MCRRWVSASWRYAS
Trigger: GGAGGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGACAAAGATGACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp GCTTGTCCCACTCTGGTCTCCTGCGCAGGTCTGACAGCAGCTGAAAGACCTGGGCACCCCAGGTGGCCCTaGTCTGACACTGGAGTCGTG +
Preference number: 2 (lower is better)
Translates to: ACPTLVSCAGLTAAERPGHPRWP*SDTGVV
Trigger: CACGACTCCAGTGTCAGAGCAGGGCCACCTGGGGTG...CCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCGGGCGGCCAGGGCCGTaGACAGGACCCGAGTCTATT +
Preference number: 2 (lower is better)
Translates to: VHPRRWGIHVNIVEPEALGRPGP*TGPESI
Trigger: AATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCC...GAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TCCTGTCCAGGCGGATCTTCTTCCTGGCACTGGCTTCTCGGTATCGCCGTTCACGGGCGGCCAGGGCCGTaGACAGGACCCGAGTCTATT +
Preference number: 2 (lower is better)
Translates to: SCPGGSSSWHWLLGIAVHGRPGP*TGPESI
Trigger: AATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCC...GTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTCTGCCCTGGCCTGTGTaGGTGGGGTCCACAGTCTCA +
Preference number: 2 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPLPWPV*VGSTVS
Trigger: TGAGACTGTGGACCCCACCCACACAGGCCAGGGCAG...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACCTTGGCCATCTGCCCTaGCCTGTGTGGGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYLGHLP*PVWVGS
Trigger: GGACCCCACCCACACAGGCCAGGGCAGATGGCCAAG...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TCTGCTCAGGGCAGCCTTGGGTGGGCATGGAAGCGGAGAAAGGGTGGTCTAGATCTTGGCCATCTGCCCTaGCCTGTGTGGGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: SAQGSLGWAWKRRKGGLDLGHLP*PVWVGS
Trigger: GGACCCCACCCACACAGGCCAGGGCAGATGGCCAAG...ATCTAGACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCCTGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp TCCTGTCCAGGCGGATCTTCTTCCTGGCACTGGCTTCTCGGTATCGCCGTTCACCTTGGCCATCTGCCCTaGCCTGTGTGGGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: SCPGGSSSWHWLLGIAVHLGHLP*PVWVGS
Trigger: GGACCCCACCCACACAGGCCAGGGCAGATGGCCAAG...GTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR TCA 90 bp TGGAGTCGTGTCTGCTGCGTCTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGCCCAAAAGGGAGAAGTaGCAGCCACAGGGCTTAGGA +
Preference number: 2 (lower is better)
Translates to: WSRVCCVWLFTPGAGASMPKREK*QPQGLG
Trigger: TCCTAAGCCCTGTGGCTGTCACTTCTCCCTTTTGGG...CATGGATGCCCCAGCGCCTGGGGTGAACAGCCAGACGCAGCAGACACGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp CAGGCGGACCTCGCTGATCTCCACGGACAGCACCCAGTTGTCCTTGGCCATGAGTATTCACGATGGCCTTaGGCACCAGACGGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: QADLADLHGQHPVVLGHEYSRWP*APDGPP
Trigger: TGGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATA...CTCATGGCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTCCTGGCCTGTGTGGGTaGGGTCCACAGTCTCACATG +
Preference number: 2 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPPGLCG*GPQSHM
Trigger: CATGTGAGACTGTGGACCCCACCCACACAGGCCAGG...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp AGGTATACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCCTGCCCTACACACCCCAGGTaGCCCTGCTCTGACACTGGA +
Preference number: 2 (lower is better)
Translates to: RYTWLLGSQGTDRATSACPTHPR*PCSDTG
Trigger: TCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGG...GCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGTATACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGGAGTCGTGTCTGCTGCGTCTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGGGCGGATCTTCTTCCTaGCACTGGCTTCTCGGTATC +
Preference number: 2 (lower is better)
Translates to: WSRVCCVWLFTPGAGASMGGSSS*HWLLGI
Trigger: GATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCC...CATGGATGCCCCAGCGCCTGGGGTGAACAGCCAGACGCAGCAGACACGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CAA 90 bp TCCCAGTCCCACTGCCCTAACGACCTCCTATGCTCGGCCTCTGGCTaGTACTCTTCTGGGCACTGGCTGGTCACTGCTTCCATTGGTGGG +
Preference number: 2 (lower is better)
Translates to: SQSHCPNDLLCSASG*YSSGHWLVTASIGG
Trigger: CCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACAAGCCAGAGGCCGAGCATAGGAGGTCGTTAGGGCAGTGGGACTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp CAGGGCGGGGCTGATGACGTGGTAGATGGCGTCATCCTCATCCACTaGCTGCACCAGCTCCACACTCCGGTAATGCTTGTCCCACTCTGG +
Preference number: 2 (lower is better)
Translates to: QGGADDVVDGVILIH*LHQLHTPVMLVPLW
Trigger: CCAGAGTGGGACAAGCATTACCGGAGTGTGGAGCTGGTGCAGCAAGTGGATGAGGATGACGCCATCTACCACGTCATCAGCCCCGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCCCACAGGGCTTAGGATaGGGGAGAGCCAGTGCATAC +
Preference number: 2 (lower is better)
Translates to: WGIHVNIVEPEALRPSLAPQGLG*GRASAY
Trigger: GTATGCACTGGCTCTCCCGCATCCTAAGCCCTGTGG...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp ATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTACTGTGGCCAGGCTCCTaGCCTCCTCCCCTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: IHVNIVEPEALRPSLATLLWPGS*PPPLEP
Trigger: TGGCTCTAGGGGAGGAGGCCAGGAGCCTGGCCACAG...TAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CAA 90 bp TTCACCTTGGAGAGCTCCCGGTGGGCCACAAAGGTGGCCAAGGCCTaGCAGACACTCCACTGCTTCTCAGAGCACAGATCCTCAGAGACC +
Preference number: 2 (lower is better)
Translates to: FTLESSRWATKVAKA*QTLHCFSEHRSSET
Trigger: GGTCTCTGAGGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp TCTAGAGAACAGATGCTCCACTCCTGGGCTCAGCTGGCATTCAGTTCTGAGCGCCTACCCTTGGCCATCTaGCCTGGCCTGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SREQMLHSWAQLAFSSERLPLAI*PGLCGW
Trigger: CCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAG...GCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp AGGTATACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCCTGCAGGTGGCCAAGGCCTTaGAGACACTCCACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: RYTWLLGSQGTDRATSACRWPRP*RHSTAS
Trigger: AGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCT...GCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGTATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp CAGGCGGACCTCGCTGATCTCCACGGACAGCACCCAGTTGTCCTTGGCCATGAGAGACAGGGCCACTTCTaGCTGCTTACAGGACACAAG +
Preference number: 2 (lower is better)
Translates to: QADLADLHGQHPVVLGHERQGHF*LLTGHK
Trigger: CTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCT...CTCATGGCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTGGCCTCCTCCCCTGTGGAAGGCTTCCCTaGGGAGTCAAGGTGAATAAA +
Preference number: 2 (lower is better)
Translates to: ATESESSQHCGQAPGLLPCGRLP*GVKVNK
Trigger: TTTATTCACCTTGACTCCCCAGGGAAGCCTTCCACA...GGGGAGGAGGCCAGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGATTGGACCATCTAGTGTaGAAGGCTTCCCTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: WEQPCGFVGWIVGGQGRGLDHLV*KASLGS
Trigger: ACTCCCCAGGGAAGCCTTCCACACTAGATGGTCCAA...TCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCACAGATATTGTGGGCTGGATTGTaGGCGGCCAGGGCCGTGGAC +
Preference number: 2 (lower is better)
Translates to: AGPKRCWTVVIRSRWSQILWAGL*AARAVD
Trigger: GTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAA...TATCTGTGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp ATGATCTTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCCCTACACACCCCAGGTaGCCCTGCTCTGACACTGGA +
Preference number: 2 (lower is better)
Translates to: MILLDIGLQEPEAGNPVPPTHPR*PCSDTG
Trigger: TCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGG...GGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAAGATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCACCAGTCACAGCACTTaGAGCCTGGGATGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: VHPRRWGIHVNIVEPEALTSHST*SLGWSW
Trigger: CCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGT...GAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGACGGGCCTCGGAAATaGAACATCTCGATGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPDGPRK*NISMAL
Trigger: CAAGGCCATCGAGATGTTCCATTTCCGAGGCCCGTC...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp TGGTGTCTGCATAGACCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTTTGCAGACACTCCACTaGTTCTCAGAGCACAGATCC +
Preference number: 2 (lower is better)
Translates to: WCLHRPVAYAGAQPPPHVLQTLH*FSEHRS
Trigger: GGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAA...AACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCTATGCAGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR-3UTR CCA 90 bp AGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACACAGCACTTGGAGCCTaGGATGGAGCTGGCAAACTC +
Preference number: 2 (lower is better)
Translates to: SGTRSSPAIPGHVSTPFYTALGA*DGAGKL
Trigger: GAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGT...GTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 90 bp GCCAGCAATTTGTCATGCCTGCCTGAGAGTCACCAGTCACAGCACTaGGAGCCTGGGATGGAGCTGGCAAACTCAAGAATGGCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: ASNLSCLPESHQSQH*EPGMELANSRMAGA
Trigger: GGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp TCTGCTCAGGGCAGCCTTGGGTGGGCATGGAAGCGGAGAAAGGGTGGTCTAGATTTTGTCATGCCTGCCTaGGAGTCACCAGTCACAGCA +
Preference number: 2 (lower is better)
Translates to: SAQGSLGWAWKRRKGGLDFVMPA*ESPVTA
Trigger: TGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAA...ATCTAGACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCCTGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp CCTGGCCTGTGTGGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCCCTGAGTGTACCACAGCACTaGTGGGAACAGCCATGTGGA +
Preference number: 2 (lower is better)
Translates to: PGLCGWGPQSHMVVLWSLSVPQH*WEQPCG
Trigger: TCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACT...CAGGGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp AACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCGGTCAATGGGATGACCTaGTTCAGCTTCACCTTGGAG +
Preference number: 2 (lower is better)
Translates to: NPVPILHTPGGPALTLESVNGMT*FSFTLE
Trigger: CTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGAC...CGACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp GCTTGTCCCACTCTGGTCTCCTGCGCAGGTCTGACAGCAGCTGAAAGACCTGGGCCCACCTCCATGCTGTaGTTAAAGGCGTTATTCACG +
Preference number: 2 (lower is better)
Translates to: ACPTLVSCAGLTAAERPGPTSML*LKALFT
Trigger: CGTGAATAACGCCTTTAAGCACAGCATGGAGGTGGG...CCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCGTACCACAGCACTGCTaGGAACAGCCATGTGGATTT +
Preference number: 2 (lower is better)
Translates to: WGIHVNIVEPEALRPSLAVPQHC*EQPCGF
Trigger: AAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTAC...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CAA 90 bp ACTCCTATTGAGGGAGTTGTGCCTGGGAAAGGGAGGAGACAAGCTTaGGAGCCCCCTCCCCTCATCTCTAGCTCTGTTTGGTTTCTGGCC +
Preference number: 2 (lower is better)
Translates to: TPIEGVVPGKGRRQA*EPPPLISSSVWFLA
Trigger: GGCCAGAAACCAAACAGAGCTAGAGATGAGGGGAGGGGGCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp AGTCATCCCAAGGAGTCACATCAGATTCCACTCCTATTGAGGGAGTaGTGCCTGGGAAAGGGAGGAGACAAGCTTTGGAGCCCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SHPKESHQIPLLLRE*CLGKGGDKLWSPLP
Trigger: GGGGAGGGGGCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAGTGGAATCTGATGTGACTCCTTGGGATGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp CCTCTGGCTTGTACTCTTCTGGGCACTGGCTGGTCACTGCTTCCATaGGTGGGTAACTCAGAAACAGACATCCCAGGGGTGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: PLACTLLGTGWSLLP*VGNSETDIPGVHIL
Trigger: GAGGATGTGCACCCCTGGGATGTCTGTTTCTGAGTTACCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACAAGCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp ACCAGCTCCACACTCTCCACTCGGGTCTTCTCGGCTGGCACCATATaGCTGCAGTCCTTGTCCAAATCGTCCTGGATGACACAGTGGGTT +
Preference number: 2 (lower is better)
Translates to: TSSTLSTRVFSAGTI*LQSLSKSSWMTQWV
Trigger: AACCCACTGTGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGGTGCCAGCCGAGAAGACCCGAGTGGAGAGTGTGGAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp TCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCATGCTACCCTTGGCCATCTaGCCTGGCCTGTGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: SHDDRISKLLPLPDREGMLPLAI*PGLCGW
Trigger: CCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAG...CATGCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGAGCCAGATGCCACTATaGCCTGTTCTCTTGACCCTG +
Preference number: 2 (lower is better)
Translates to: HRSFRPRVLCSADTSICPSQMPL*PVLLTL
Trigger: CAGGGTCAAGAGAACAGGGCATAGTGGCATCTGGCT...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp GAGTGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTCCTACACACCCCAGGTaGCCCTGCTCTGACACTGGA +
Preference number: 2 (lower is better)
Translates to: EWGVIRKAKNGGQQFVMPPTHPR*PCSDTG
Trigger: TCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGG...AGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp CACCGGGCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCACCTGGGGAGTCAAGGTaGATAAATGTCTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: HRAGPKRCWTVVIRSRWSPGESR*INVSAL
Trigger: CAAAGCAGAGACATTTATTCACCTTGACTCCCCAGG...TGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGCCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp GGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGTGAATAAATGTCTCTaGTTTGTTCCACGCACTGTG +
Preference number: 2 (lower is better)
Translates to: GTAMWICGLDCGRPGPWTVNKCL*FVPRTV
Trigger: CACAGTGCGTGGAACAAAGCAGAGACATTTATTCAC...TGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp ATGATCTTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCAGATGGTCACAGATATaGTGGAGCTGTGTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: MILLDIGLQEPEAGNPVPRWSQI*WSCVRD
Trigger: GTCCCTGACACAGCTCCAGCATATCTGTGACCATCT...GGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAAGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp ATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAACATACACACACACATaGACGCACTCGAGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: IHVNIVEPEALRPSLATLTYTHT*THSSAL
Trigger: CAGGGCACTCGAGTGCGTGCATGTGTGTGTGTATGT...TAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp ACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCCTGCTTACAGATCTTTGATGGTGTCTaGATAGACCAGTCGCATACG +
Preference number: 2 (lower is better)
Translates to: TWLLGSQGTDRATSACLQIFDGV*IDQSHT
Trigger: CGTATGCGACTGGTCTATGCAGACACCATCAAAGAT...CTGTAAGCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACTGTGGAAGGCTTCCCTaGGGAGTCAAGGTGAATAAA +
Preference number: 2 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYCGRLP*GVKVNK
Trigger: TTTATTCACCTTGACTCCCCAGGGAAGCCTTCCACA...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp AGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACTGTGGAAGGCTTCCCTaGGGAGTCAAGGTGAATAAA +
Preference number: 2 (lower is better)
Translates to: SGTRSSPAIPGHVSTPFYCGRLP*GVKVNK
Trigger: TTTATTCACCTTGACTCCCCAGGGAAGCCTTCCACA...GTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCATGCCTGGCCTGTGTGGGTaGGGTCCACAGTCTCACATG +
Preference number: 2 (lower is better)
Translates to: SHDDRISKLLPLPDREGMPGLCG*GPQSHM
Trigger: CATGTGAGACTGTGGACCCCACCCACACAGGCCAGG...CATGCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCTGGCAAACTCAAGAATaGCTGGTGCCTCTTGATCTA +
Preference number: 2 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVWQTQE*LVPLDL
Trigger: TAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCA...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGGGGGAAAATTCTGCGTaGAACAGGAGACAGGAGCTA +
Preference number: 2 (lower is better)
Translates to: HRSFRPRVLCSADTSICPGENSA*NRRQEL
Trigger: TAGCTCCTGTCTCCTGTTCCACGCAGAATTTTCCCC...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp GCCAGTGCATACACAAGGCAATTTGTGGAGAGTGGTCCCTTCACATaGGCAATTTTGGGTCCCACAGTGAACACCACCCGGAAGCGAACC +
Preference number: 2 (lower is better)
Translates to: ASAYTRQFVESGPFT*AILGPTVNTTRKRT
Trigger: GGTTCGCTTCCGGGTGGTGTTCACTGTGGGACCCAAAATTGCCAATGTGAAGGGACCACTCTCCACAAATTGCCTTGTGTATGCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 90 bp CTCTCCACTCGGGTCTTCTCGGCTGGCACCATATTGCTGCAGTCCTaGTCCAAATCGTCCTGGATGACACAGTGGGTTAGGAGATCTTTG +
Preference number: 2 (lower is better)
Translates to: LSTRVFSAGTILLQS*SKSSWMTQWVRRSL
Trigger: CAAAGATCTCCTAACCCACTGTGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGGTGCCAGCCGAGAAGACCCGAGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp GCTCAGGTATACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCGTGAATAAATGTCTCTaGTTTGTTCCACGCACTGTG +
Preference number: 2 (lower is better)
Translates to: AQVYLVARVPGDRQGHFCVNKCL*FVPRTV
Trigger: CACAGTGCGTGGAACAAAGCAGAGACATTTATTCAC...GCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAGCAACCAGGTATACCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp GGAAAGGGAGGAGACAAGCTTTGGAGCCCCCTCCCCTCATCTCTAGCTCTGTTTAGATGGTCACAGATATaGTGGAGCTGTGTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: GKGGDKLWSPLPSSLALFRWSQI*WSCVRD
Trigger: GTCCCTGACACAGCTCCAGCATATCTGTGACCATCT...AAACAGAGCTAGAGATGAGGGGAGGGGGCTCCAAAGCTTGTCTCCTCCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGTTGCAGACACTCCACTaGTTCTCAGAGCACAGATCC +
Preference number: 2 (lower is better)
Translates to: CTTALLGTAMWICGLDCGLQTLH*FSEHRS
Trigger: GGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAA...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TCTAGAGAACAGATGCTCCACTCCTGGGCTCAGCTGGCATTCAGTTCTGAGCGCGTACCACAGCACTGCTaGGAACAGCCATGTGGATTT +
Preference number: 2 (lower is better)
Translates to: SREQMLHSWAQLAFSSERVPQHC*EQPCGF
Trigger: AAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTAC...GCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGCCTGGCCTGTGTGGGTaGGGTCCACAGTCTCACATG +
Preference number: 2 (lower is better)
Translates to: RVYYRISQEYWKDLQADVPGLCG*GPQSHM
Trigger: CATGTGAGACTGTGGACCCCACCCACACAGGCCAGG...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGGAAGCGGAGAAAGGGTaGTCTAGATGGGGAAAATTC +
Preference number: 2 (lower is better)
Translates to: HRSFRPRVLCSADTSICPEAEKG*SRWGKF
Trigger: GAATTTTCCCCATCTAGACCACCCTTTCTCCGCTTC...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp CACGTTGTAGTAGCTCAGGTATACCTGGTTGCTAGGGTCCCAGGGGACAGACAGGGGTTAGGAGATCTTTaGTGGTGTCTGCATAGACCA +
Preference number: 2 (lower is better)
Translates to: HVVVAQVYLVARVPGDRQGLGDL*WCLHRP
Trigger: TGGTCTATGCAGACACCATCAAAGATCTCCTAACCC...CTGTCTGTCCCCTGGGACCCTAGCAACCAGGTATACCTGAGCTACTACAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR GCA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCAGTGTACCACAGCACTaGTGGGAACAGCCATGTGGA +
Preference number: 2 (lower is better)
Translates to: TSHDDRISKLLPLPDREGSVPQH*WEQPCG
Trigger: TCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACT...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp TCACCAGTCACAGCACTTGGAGCCTGGGATGGAGCTGGCAAACTCAAGAATGGCAGAGATGCTGGACAGTaGTTATCAGGAGCAGATGGT +
Preference number: 2 (lower is better)
Translates to: SPVTALGAWDGAGKLKNGRDAGQ*LSGADG
Trigger: ACCATCTGCTCCTGATAACCACTGTCCAGCATCTCT...GCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 90 bp AGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTaGCAGGCAGATGTGAGCAGCAACCGACCATCCAGTAGGATTGGA +
Preference number: 2 (lower is better)
Translates to: RTRVYYRISQEYWKD*QADVSSNRPSSRIG
Trigger: TCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CAA 90 bp TCATCCGGGACAACAGTGCCGCTCACCAAATCTACTATGACCTCTTaGAGCCTGTCTTGTCGCAGTTTAAGCAGCTGGCCTGTAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SSGTTVPLTKSTMTS*SLSCRSLSSWPVRR
Trigger: CCTTCTTACAGGCCAGCTGCTTAAACTGCGACAAGACAGGCTCAAAGAGGTCATAGTAGATTTGGTGAGCGGCACTGTTGTCCCGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp TGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTGCCCCTGGGGAGTCAAGGTaGATAAATGTCTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: WGVIRKAKNGGQQFVMPAPGESR*INVSAL
Trigger: CAAAGCAGAGACATTTATTCACCTTGACTCCCCAGG...GGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp ACCACTCTTTATGTGCCTCAGTTGCCAAACAGCACATACACCCAAGCCATGGTGGCCAGCAATTTGTCATaGCTGCCTGAGAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: TTLYVPQLPNSTYTQAMVASNLS*LPESHQ
Trigger: CTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGC...CACCATGGCTTGGGTGTATGTGCTGTTTGGCAACTGAGGCACATAAAGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp ACAGACAGAAGCCTGAACAGAGAGTCTCCCCACGTTGGTATTCCGGTGTCTCATAGGGCCACTTCTGCCTaGTTACAGGACACAAGGTAT +
Preference number: 2 (lower is better)
Translates to: TDRSLNRESPHVGIPVSHRATSA*LQDTRY
Trigger: ATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCT...ATGAGACACCGGAATACCAACGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp ATCTCCTCTTCATCCGGGACAACAGTGCCGCTCACCAAATCTACTATGACCTCTTTGGACCATCTAGTGTaGAAGGCTTCCCTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: ISSSSGTTVPLTKSTMTSLDHLV*KASLGS
Trigger: ACTCCCCAGGGAAGCCTTCCACACTAGATGGTCCAA...AGAGGTCATAGTAGATTTGGTGAGCGGCACTGTTGTCCCGGATGAAGAGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCGTACCACAGCACTGCTaGGAACAGCCATGTGGATTT +
Preference number: 2 (lower is better)
Translates to: TSHDDRISKLLPLPDREGVPQHC*EQPCGF
Trigger: AAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTAC...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGGGCTGGCTGCAATGGTaGCCACATTCTCCATCCAAG +
Preference number: 2 (lower is better)
Translates to: RVYYRISQEYWKDLQADVGWLQW*PHSPSK
Trigger: CTTGGATGGAGAATGTGGCCACCATTGCAGCCAGCC...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CAA 90 bp CTACACTTAAGTCATCCCAAGGAGTCACATCAGATTCCACTCCTATaGAGGGAGTTGTGCCTGGGAAAGGGAGGAGACAAGCTTTGGAGC +
Preference number: 2 (lower is better)
Translates to: LHLSHPKESHQIPLL*RELCLGKGGDKLWS
Trigger: GCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAGTGGAATCTGATGTGACTCCTTGGGATGACTTAAGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp ACCACTCTTTATGTGCCTCAGTTGCCAAACAGCACATACACCCAAGCCATGGTGGTTATCAGGAGCAGATaGTCACAGATATGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: TTLYVPQLPNSTYTQAMVVIRSR*SQICWS
Trigger: GCTCCAGCATATCTGTGACCATCTGCTCCTGATAAC...CACCATGGCTTGGGTGTATGTGCTGTTTGGCAACTGAGGCACATAAAGAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CTGACTGTTCCTGTCGCTGTGGCAAGAGCCTACAAGAAGGGAAAGATGGGTATCTCCATCATCCTCTGGTaGGAATCTAGAGAACAGATG +
Preference number: 2 (lower is better)
Translates to: LTVPVAVARAYKKGKMGISIILW*ESREQM
Trigger: CATCTGTTCTCTAGATTCCCACCAGAGGATGATGGA...GATACCCATCTTTCCCTTCTTGTAGGCTCTTGCCACAGCGACAGGAACAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp TGGAAAGACTTGCAGGCAGATGTGAGCAGCAACCGACCATCCAGTAGGATTGGAGTGAATAAATGTCTCTaGTTTGTTCCACGCACTGTG +
Preference number: 2 (lower is better)
Translates to: WKDLQADVSSNRPSSRIGVNKCL*FVPRTV
Trigger: CACAGTGCGTGGAACAAAGCAGAGACATTTATTCAC...TCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CCA 90 bp CGAGCAGTGGGTGACATTAATTTCCTATTGAAAATTTGCATCAGAACAAAATTCCTGTGGCCAGGCTCCTaGCCTCCTCCCCTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: RAVGDINFLLKICIRTKFLWPGS*PPPLEP
Trigger: TGGCTCTAGGGGAGGAGGCCAGGAGCCTGGCCACAG...GAATTTTGTTCTGATGCAAATTTTCAATAGGAAATTAATGTCACCCACTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR TCA 90 bp GCTATTCTGAGAATTTGTCTTCTGCCCCTGGGATATTATGTTATCCAAGCGATGTGTAGGAGTGCAATCTaGTCACAACCTAGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: AILRICLLPLGYYVIQAMCRSAI*SQPSQV
Trigger: GACTTGGCTAGGTTGTGATCAGATTGCACTCCTACA...CATCGCTTGGATAACATAATATCCCAGGGGCAGAAGACAAATTCTCAGAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CCTCCATCTGCCCGGCCAACATTTACTGATTCTCAAAATGAGTTATATTTGGAAAGAGATGCTGGACAGTaGTTATCAGGAGCAGATGGT +
Preference number: 2 (lower is better)
Translates to: PPSARPTFTDSQNELYLERDAGQ*LSGADG
Trigger: ACCATCTGCTCCTGATAACCACTGTCCAGCATCTCT...TTCCAAATATAACTCATTTTGAGAATCAGTAAATGTTGGCCGGGCAGATGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR GCA 90 bp CGAGCAGTGGGTGACATTAATTTCCTATTGAAAATTTGCATCAGAACAAAATTCCTATTGAGGGAGTTGTaGCTGGGAAAGGGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: RAVGDINFLLKICIRTKFLLREL*LGKGGD
Trigger: GTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAG...GAATTTTGTTCTGATGCAAATTTTCAATAGGAAATTAATGTCACCCACTGCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CGAGCAGTGGGTGACATTAATTTCCTATTGAAAATTTGCATCAGAACAAAATTCAGTTCTGGAAGTGAATaGCAGTGGGAGAAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RAVGDINFLLKICIRTKFSSGSE*QWEKSS
Trigger: GCTGCTCTTCTCCCACTGCCATTCACTTCCAGAACT...GAATTTTGTTCTGATGCAAATTTTCAATAGGAAATTAATGTCACCCACTGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CCA 90 bp CCTCCATCTGCCCGGCCAACATTTACTGATTCTCAAAATGAGTTATATTTGGAAAGGAATCTGAAACTTTaGAGACTCGAAGCCATCTGT +
Preference number: 2 (lower is better)
Translates to: PPSARPTFTDSQNELYLERNLKL*RLEAIC
Trigger: ACAGATGGCTTCGAGTCTCCAAAGTTTCAGATTCCT...TTCCAAATATAACTCATTTTGAGAATCAGTAAATGTTGGCCGGGCAGATGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp CAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTaGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCG +
Preference number: 3 (lower is better)
Translates to: QHCWEQPCGFVG*IVGGQGRGQDP
Trigger: CGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp GGCAACCTGTGTCCTTCCAGCTGCAGGCTGGGCCACTaGGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: GNLCPSSCRLGH*VRVQPTLWPGS
Trigger: GGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGCCCAGCCTGCAGCTGGAAGGACACAGGTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR GCA 72 bp TCCAGGACCACGAAGGTCATGAAGGCGCTGTTGATGTaGCGGCGCTGGGTCTCAGCTTCCTGGCGGTACGCC +
Preference number: 3 (lower is better)
Translates to: SRTTKVMKALLM*RRWVSASWRYA
Trigger: GGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp CAAGGCTTCCGCCTAGAGGCCAGGATCACAAAGTCCTaGGGCTTGGTGTTCCCGCTCAGGGCGGGGCTGATG +
Preference number: 3 (lower is better)
Translates to: QGFRLEARITKS*GLVFPLRAGLM
Trigger: CATCAGCCCCGCCCTGAGCGGGAACACCAAGCCCCAGGACTTTGTGATCCTGGCCTCTAGGCGGAAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCTGCTTCAGCTTCACCTaGGAGAGCTCCCGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVCFSFT*ESSRWA
Trigger: GGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCA...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp GCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTaGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTAT +
Preference number: 3 (lower is better)
Translates to: AGNSHVDLWAGL*AARAVDRTRVY
Trigger: ATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp TACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTaGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: YHSTAGNSHVDL*AGLWAARAVDR
Trigger: CCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp ACGAAGGTCATGAAGGCGCTGTTGATGTGCCGGCGCTaGGTCTCAGCTTCCTGGCGGTACGCCTCCACACAC +
Preference number: 3 (lower is better)
Translates to: TKVMKALLMCRR*VSASWRYASTH
Trigger: GTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCCACCAGTCACAGCACTaGGAGCCTGGGATGGAGCTG +
Preference number: 3 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVHQSQH*EPGMEL
Trigger: CAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTG...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR TCA 72 bp CTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTaGCACTGGAGTCGTGTCTGCTGCGTCTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: LYPSYTPQVALL*HWSRVCCVWLF
Trigger: GAACAGCCAGACGCAGCAGACACGACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp TTCACGATGGCCTTGAGCACCAGACGGTCCCCCACCTaGGACGGGCCTCGGAAATGGAACATCTCGATGGCC +
Preference number: 3 (lower is better)
Translates to: FTMALSTRRSPT*DGPRKWNISMA
Trigger: GGCCATCGAGATGTTCCATTTCCGAGGCCCGTCTCAGGTGGGGGACCGTCTGGTGCTCAAGGCCATCGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 72 bp CCCTCTCCAGGCTGGGGACGAATCCAGGGCAGCTTCTaGGGCTGGTCATCTTTGTCCAGGACCACGAAGGTC +
Preference number: 3 (lower is better)
Translates to: PSPGWGRIQGSF*GWSSLSRTTKV
Trigger: GACCTTCGTGGTCCTGGACAAAGATGACCAGCCTCAGAAGCTGCCCTGGATTCGTCCCCAGCCTGGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 72 bp CCACACTCCGGTAATGCTTGTCCCACTCTGGTCTCCTaGGCAGGTCTGACAGCAGCTGAAAGACCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: PHSGNACPTLVS*AGLTAAERPGR
Trigger: CCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGCATTACCGGAGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp TCACAGTGTACCACAGCACTGCTGGGAACAGCCATGTaGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: SQCTTALLGTAM*ICGLDCGRPGP
Trigger: CGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACACTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp AGAGCCAAGAGTCAGGCGGGCCCTGAGTCAGCTCTCTaGTTCCAGGTACAGCCTAACACTGTGGCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: RAKSQAGPESAL*FQVQPNTVAGC
Trigger: GCACCCTGCCACAGTGTTAGGCTGTACCTGGAACCAGAGAGCTGACTCAGGGCCCGCCTGACTCTTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GCTTCACCTTGGAGAGCTCCCGGTGGGCCACAAAGGTaGCCAAGGCCTTGCAGACACTCCACTGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: ASPWRAPGGPQR*PRPCRHSTASQ
Trigger: CTGAGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR CCA 72 bp CAGAGAGTCTCCCCACGTTGGTATTCCGGTGTCTCATaGTGCGTGGGCAGCGTGACCGACCTCAGGGCAATG +
Preference number: 3 (lower is better)
Translates to: QRVSPRWYSGVS*CVGSVTDLRAM
Trigger: CATTGCCCTGAGGTCGGTCACGCTGCCCACGCACCATGAGACACCGGAATACCAACGTGGGGAGACTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACCACCAGTCACAGCACTaGGAGCCTGGGATGGAGCTG +
Preference number: 3 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYHQSQH*EPGMEL
Trigger: CAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTG...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR GCA 72 bp CTAGGGTCCCAGGGGACAGACAGGGCCACTTCTGCCTaGTTACAGGACACAAGGTATTTCCTGTCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: LGSQGTDRATSA*LQDTRYFLSRR
Trigger: CCGCCTGGACAGGAAATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCTGTCCCCTGGGACCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 72 bp AGAGTCTCCCCACGTTGGTATTCCGGTGTCTCATGGTaGGTGGGCAGCGTGACCGACCTCAGGGCAATGACA +
Preference number: 3 (lower is better)
Translates to: RVSPRWYSGVSW*VGSVTDLRAMT
Trigger: TGTCATTGCCCTGAGGTCGGTCACGCTGCCCACGCACCATGAGACACCGGAATACCAACGTGGGGAGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp TGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTaGACAGGACCCGAGTCTATTACAGGATATCCCAGG +
Preference number: 3 (lower is better)
Translates to: WICGLDCGRPGP*TGPESITGYPR
Trigger: CCTGGGATATCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGTGCTCGGCCTCTGGCTaGTACTCTTCTGGGCACTGG +
Preference number: 3 (lower is better)
Translates to: HRSFRPRVLCSADTSICPCSASG*YSSGHW
Trigger: CCAGTGCCCAGAAGAGTACAAGCCAGAGGCCGAGCA...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAAAGGTGGCCAAGGCCTaGCAGACACTCCACTGCTTC +
Preference number: 3 (lower is better)
Translates to: LAVHPRRWGIHVNIVEPEKVAKA*QTLHCF
Trigger: GAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTT...TTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCGAGTACTGGAAAGACTaGCAGGCAGATGTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVEYWKD*QADVSS
Trigger: GCTGCTCACATCTGCCTGCAAGTCTTTCCAGTACTC...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp AGGCATGATCTTGCTGGACATTGGCCTCCAGGAACCTaGGGCTGGGAACCCTGTACCCATCCTACACACCCC +
Preference number: 3 (lower is better)
Translates to: RHDLAGHWPPGT*GWEPCTHPTHP
Trigger: GGGGTGTGTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAAGATCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp GGAAGTCCTCTTCTAGGATGTACAGGCGGACCTCGCTaGTCTCCACGGACAGCACCCAGTTGTCCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: GSPLLGCTGGPR*SPRTAPSCPWP
Trigger: TGGCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCTGTACATCCTAGAAGAGGACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 72 bp TCCCACTCTGGTCTCCTGCGCAGGTCTGACAGCAGCTaGAAGACCTGGGCGGCATCCACATTTACCACCATC +
Preference number: 3 (lower is better)
Translates to: SHSGLLRRSDSS*KTWAASTFTTI
Trigger: GATGGTGGTAAATGTGGATGCCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp GGGCAGCCTTGGGTGGGCATGGAAGCGGAGAAAGGGTaGTCTAGATGGGGAAAATTCTGCGTGGAACAGGAG +
Preference number: 3 (lower is better)
Translates to: GQPWVGMEAEKG*SRWGKFCVEQE
Trigger: CTCCTGTTCCACGCAGAATTTTCCCCATCTAGACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp AATTGTGGGCTGTGTTCTGCTCAGGGCAGCCTTGGGTaGGCATGGAAGCGGAGAAAGGGTGGTCTAGATGGG +
Preference number: 3 (lower is better)
Translates to: NCGLCSAQGSLG*AWKRRKGGLDG
Trigger: CCCATCTAGACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCCTGAGCAGAACACAGCCCACAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp TCGCAGTTTAAGCAGCTGGCCTGTAAGAAGGGAGCCTaGGAGGGGAATTGTGGGCTGTGTTCTGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: SQFKQLACKKGA*EGNCGLCSAQG
Trigger: GCCCTGAGCAGAACACAGCCCACAATTCCCCTCCCAGGCTCCCTTCTTACAGGCCAGCTGCTTAAACTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GGTATTTCCTGTCCAGGCGGATCTTCTTCCTGGCACTaGCTTCTCGGTATCGCCGTTCACCCTCTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: GISCPGGSSSWH*LLGIAVHPLQA
Trigger: AGCCTGGAGAGGGTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp CACAGACAGAAGCCTGAACAGAGAGTCTCCCCACGTTaGTATTCCGGTGTCTCATGGTGCGTGGGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: HRQKPEQRVSPR*YSGVSWCVGSV
Trigger: CACGCTGCCCACGCACCATGAGACACCGGAATACCAACGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CCA 72 bp CTTTGTTCCACGCACTGTGTAAGACCTGGGGCAGCATaGGTGGTGTCTAGAGGGTCTGGAGGCTGGGAGCTA +
Preference number: 3 (lower is better)
Translates to: LCSTHCVRPGAA*VVSRGSGGWEL
Trigger: TAGCTCCCAGCCTCCAGACCCTCTAGACACCACCCATGCTGCCCCAGGTCTTACACAGTGCGTGGAACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 72 bp GTAATGCTTGTCCCACTCTGGTCTCCTGCGCAGGTCTaGCAGCAGCTGAAAGACCTGGGCGGCATCCACATT +
Preference number: 3 (lower is better)
Translates to: VMLVPLWSPAQV*QQLKDLGGIHI
Trigger: AATGTGGATGCCGCCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGCATTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 72 bp ACTCAGAAACAGACATCCCAGGGGTGCACATCCTCCTaGCCTCTGAACCTCCGCTCTCCATCATCCTCTGGT +
Preference number: 3 (lower is better)
Translates to: TQKQTSQGCTSS*PLNLRSPSSSG
Trigger: ACCAGAGGATGATGGAGAGCGGAGGTTCAGAGGGCAGGAGGATGTGCACCCCTGGGATGTCTGTTTCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp CATTGGTGGGTAACTCAGAAACAGACATCCCAGGGGTaGACATCCTCCTGCCCTCTGAACCTCCGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: HWWVTQKQTSQG*TSSCPLNLRSP
Trigger: TGGAGAGCGGAGGTTCAGAGGGCAGGAGGATGTGCACCCCTGGGATGTCTGTTTCTGAGTTACCCACCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp AGAGGGGTCCTAAAGATCATCTTGTCCCAGTCCCACTaGCCTAACGACCTCCTATGCTCGGCCTCTGGCTTG +
Preference number: 3 (lower is better)
Translates to: RGVLKIILSQSH*PNDLLCSASGL
Trigger: CAAGCCAGAGGCCGAGCATAGGAGGTCGTTAGGGCAGTGGGACTGGGACAAGATGATCTTTAGGACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp TTTCTACCCTTGGCCATCTGCCCTGGCCTGTGTGGGTaGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCC +
Preference number: 3 (lower is better)
Translates to: FLPLAICPGLCG*GPQSHMVVLWS
Trigger: GGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp CACCTTTCTACCCTTGGCCATCTGCCCTGGCCTGTGTaGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: HLSTLGHLPWPV*VGSTVSHGSFV
Trigger: CACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGGGCAGATGGCCAAGGGTAGAAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp AGGGAGTTGTGCCTGGGAAAGGGAGGAGACAAGCTTTaGAGCCCCCTCCCCTCATCTCTAGCTCTGTTTGGT +
Preference number: 3 (lower is better)
Translates to: RELCLGKGGDKL*SPLPSSLALFG
Trigger: ACCAAACAGAGCTAGAGATGAGGGGAGGGGGCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp TGCCTCAGTTGCCAAACAGCACATACACCCAAGCCATaGTGGAAACAATGCAGGAGCTGGTCGGAGCGCTGC +
Preference number: 3 (lower is better)
Translates to: CLSCQTAHTPKP*WKQCRSWSERC
Trigger: GCAGCGCTCCGACCAGCTCCTGCATTGTTTCCACCATGGCTTGGGTGTATGTGCTGTTTGGCAACTGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGACCATCCAGTAGGATaGGACCATCTAGTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: LAVHPRRWGIHVNIVEPEDHPVG*DHLVWK
Trigger: CTTCCACACTAGATGGTCCAATCCTACTGGATGGTC...TTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp GCCAAGAATGGAGGCCAGCAATTTGTCATGCCTGCCTaGGAGTCACCAGTCACAGCACTTGGAGCCTGGGAT +
Preference number: 3 (lower is better)
Translates to: AKNGGQQFVMPA*ESPVTALGAWD
Trigger: ATCCCAGGCTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR GCA 72 bp GAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTaGCTGAGAGTCACCAGTCACAGCACTTGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: EGQEWRPAICHA*LRVTSHSTWSL
Trigger: CAGGCTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR GCA 72 bp AGAAGAGCAGCCATTACAGTTCCTGGTGAGTCTGCCTaGAGCTCTAAAGCTCCTGGCTACCCTCACCCACAG +
Preference number: 3 (lower is better)
Translates to: RRAAITVPGESA*SSKAPGYPHPQ
Trigger: CTGTGGGTGAGGGTAGCCAGGAGCTTTAGAGCTGCAGGCAGACTCACCAGGAACTGTAATGGCTGCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp GTGACAGCCACAGGGCTTAGGATGCGGGAGAGCCAGTaGATACACAAGGCAATTTGTGGAGAGTGGTCCCTT +
Preference number: 3 (lower is better)
Translates to: VTATGLRMRESQ*IHKAICGEWSL
Trigger: AAGGGACCACTCTCCACAAATTGCCTTGTGTATGCACTGGCTCTCCCGCATCCTAAGCCCTGTGGCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp CTCCAGCAGCCCAAGGGTGATGGTCTGGAGGTAGAGTaGCTAGTTCTGGAAGTGAATGGCAGTGGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LQQPKGDGLEVE*LVLEVNGSGRR
Trigger: TCTTCTCCCACTGCCATTCACTTCCAGAACTAGCCACTCTACCTCCAGACCATCACCCTTGGGCTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GCTCGGCCTCTGGCTTGTACTCTTCTGGGCACTGGCTaGTCACTGCTTCCATTGGTGGGTAACTCAGAAACA +
Preference number: 3 (lower is better)
Translates to: ARPLACTLLGTG*SLLPLVGNSET
Trigger: TGTTTCTGAGTTACCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACAAGCCAGAGGCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp ACACAAGGTATTTCCTGTCCAGGCGGATCTTCTTCCTaGCACTGGCTTCTCGGTATCGCCGTTCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: TQGISCPGGSSS*HWLLGIAVHPL
Trigger: GAGAGGGTGAACGGCGATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCCTGGACAGGAAATACCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 72 bp AATGTCAAGAGCAGGAACTCCTGGTCTTCACAGCCTTaGGTCCTCAGCCACACTGTGACTAGAGGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: NVKSRNSWSSQP*VLSHTVTRGVG
Trigger: CCCCACTCCTCTAGTCACAGTGTGGCTGAGGACTCAAGGCTGTGAAGACCAGGAGTTCCTGCTCTTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR TCA 72 bp GACCGGATCCCAGACCTCTCTGACTGCACAGGGTGGTaGTATCAGCAGGAGGATGTACAAATCACTGCTGCT +
Preference number: 3 (lower is better)
Translates to: DRIPDLSDCTGW*YQQEDVQITAA
Trigger: AGCAGCAGTGATTTGTACATCCTCCTGCTGATATCACCACCCTGTGCAGTCAGAGAGGTCTGGGATCCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 72 bp TGGCTGCAATGGTGGCCACATTCTCCATCCAAGCCATaGTCTGTCCCCCGAAGGTATTGCCCTGATGATTGG +
Preference number: 3 (lower is better)
Translates to: WLQWWPHSPSKP*SVPRRYCPDDW
Trigger: CCAATCATCAGGGCAATACCTTCGGGGGACAGATCATGGCTTGGATGGAGAATGTGGCCACCATTGCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 72 bp TGGACAGTGGTTATCAGGAGCAGATGGTCACAGATATaGTGGAGCTGTGTCAGGGACTCCGGCAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: WTVVIRSRWSQI*WSCVRDSGNLC
Trigger: ACACAGGTTGCCGGAGTCCCTGACACAGCTCCAGCATATCTGTGACCATCTGCTCCTGATAACCACTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR GCA 72 bp AAACCCCTCTACTGGTCCCAAACCTATCCTGGGCTCTaGCCCAAGATGAACACGTCAAGAGGGGTCCTAAAG +
Preference number: 3 (lower is better)
Translates to: KPLYWSQTYPGL*PKMNTSRGVLK
Trigger: CTTTAGGACCCCTCTTGACGTGTTCATCTTGGGGCAGAGCCCAGGATAGGTTTGGGACCAGTAGAGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GTCACCAGTCACAGCACTTGGAGCCTGGGATGGAGCTaGCAAACTCAAGAATGGCTGGTGCCTCTTGATCTA +
Preference number: 3 (lower is better)
Translates to: VTSHSTWSLGWS*QTQEWLVPLDL
Trigger: TAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CCA 72 bp CTCTGGTGGGAATCTAGAGAACAGATGCTCCACTCCTaGGCTCAGCTGGCATTCAGTTCTGAGCGCACAAGT +
Preference number: 3 (lower is better)
Translates to: LWWESREQMLHS*AQLAFSSERTS
Trigger: ACTTGTGCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATTCCCACCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCAACAGCCATGTGGATTaGTGGGCTGGATTGTGGGCG +
Preference number: 3 (lower is better)
Translates to: TSHDDRISKLLPLPDREGNSHVD*WAGLWA
Trigger: CGCCCACAATCCAGCCCACAAATCCACATGGCTGTT...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp ATGGAGCTGGCAAACTCAAGAATGGCTGGTGCCTCTTaGTCTATCCCCATGACATGCCCCCATGTATGTCCC +
Preference number: 3 (lower is better)
Translates to: MELANSRMAGAS*SIPMTCPHVCP
Trigger: GGGACATACATGGGGGCATGTCATGGGGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR TCA 72 bp GTCATCCCAAGGAGTCACATCAGATTCCACTCCTATTaGGGGAGTTGTGCCTGGGAAAGGGAGGAGACAAGC +
Preference number: 3 (lower is better)
Translates to: VIPRSHIRFHSY*GSCAWEREETS
Trigger: GCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAGTGGAATCTGATGTGACTCCTTGGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp TTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATaGCTGCCTGAGAGTCACCAGTCACAGCACTTGGAG +
Preference number: 3 (lower is better)
Translates to: LGRPRMEASNLS*LPESHQSQHLE
Trigger: CTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR GCA 72 bp CACACACACATACATACACACACATACACACACACATaGACGCACTCGAGTGCCCTGGCTTCCACAGCACCA +
Preference number: 3 (lower is better)
Translates to: HTHIHTHTYTHT*THSSALASTAP
Trigger: TGGTGCTGTGGAAGCCAGGGCACTCGAGTGCGTGCATGTGTGTGTGTATGTGTGTGTATGTATGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp CTCTGGCTTGTACTCTTCTGGGCACTGGCTGGTCACTaGTTCCATTGGTGGGTAACTCAGAAACAGACATCC +
Preference number: 3 (lower is better)
Translates to: LWLVLFWALAGH*FHWWVTQKQTS
Trigger: GGATGTCTGTTTCTGAGTTACCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACAAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp CACCTTACAAGTCTCACTCAAGCCCCTCTGTCGATGTaGGGATGTTTAAAAGGCCCTGCCCTGACAGTCACT +
Preference number: 3 (lower is better)
Translates to: HLTSLTQAPLSM*GCLKGPALTVT
Trigger: AGTGACTGTCAGGGCAGGGCCTTTTAAACATCCCCACATCGACAGAGGGGCTTGAGTGAGACTTGTAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGACCTCCATGCTGGAGTaGAAGGCCCGGTTCACCTTG +
Preference number: 3 (lower is better)
Translates to: RVYYRISQEYWKDLQADVTSMLE*KARFTL
Trigger: CAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGGT...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR-3UTR CAA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGTTATTCACGATGGCCTaGAGCACCAGACGGTCCCCC +
Preference number: 3 (lower is better)
Translates to: RVYYRISQEYWKDLQADVLFTMA*STRRSP
Trigger: GGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATAA...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR TCA 72 bp TATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTaGGCAGCAACCGACCATCCAGTAGGATTGGACCAT +
Preference number: 3 (lower is better)
Translates to: YPRSTGKTCRQM*AATDHPVGLDH
Trigger: ATGGTCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR GCA 72 bp TTTGGAGACTCGAAGCCATCTGTCAGCATGCAGATCTaGACACCTTACAAGTCTCACTCAAGCCCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: FGDSKPSVSMQI*TPYKSHSSPSV
Trigger: GACAGAGGGGCTTGAGTGAGACTTGTAAGGTGTGCAGATCTGCATGCTGACAGATGGCTTCGAGTCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp TCCTGGCTACCCTCACCCACAGGTCTGTCATTTGCTTaGGTGGGTAACTTGATTCTCTGTTACCATGGCAAC +
Preference number: 3 (lower is better)
Translates to: SWLPSPTGLSFA*VGNLILCYHGN
Trigger: GTTGCCATGGTAACAGAGAATCAAGTTACCCACCCAAGCAAATGACAGACCTGTGGGTGAGGGTAGCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GATGCGGGAGAGCCAGTGCATACACAAGGCAATTTGTaGAGAGTGGTCCCTTCACATTGGCAATTTTGGGTC +
Preference number: 3 (lower is better)
Translates to: DAGEPVHTQGNL*RVVPSHWQFWV
Trigger: GACCCAAAATTGCCAATGTGAAGGGACCACTCTCCACAAATTGCCTTGTGTATGCACTGGCTCTCCCGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp AATCTAGAGAACAGATGCTCCACTCCTGGGCTCAGCTaGCATTCAGTTCTGAGCGCACAAGTAGAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: NLENRCSTPGLS*HSVLSAQVEPR
Trigger: TCTTGGCTCTACTTGTGCGCTCAGAACTGAATGCCAGCTGAGCCCAGGAGTGGAGCATCTGTTCTCTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGGACCATCCAGTAGGATaGGACCATCTAGTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: PESITGYPRSTGKTCRQMDHPVG*DHLVWK
Trigger: CTTCCACACTAGATGGTCCAATCCTACTGGATGGTC...CATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
3UTR CCA 72 bp GGCACCATATTGCTGCAGTCCTTGTCCAAATCGTCCTaGATGACACAGTGGGTTAGGAGATCTTTGATGGTG +
Preference number: 3 (lower is better)
Translates to: GTILLQSLSKSS*MTQWVRRSLMV
Trigger: CACCATCAAAGATCTCCTAACCCACTGTGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR GCA 72 bp CAGTCACTATCTTTGAGAATCAGATGGATCACCAGATaGAGAGTAGAGACCGGATCCCAGACCTCTCTGACT +
Preference number: 3 (lower is better)
Translates to: QSLSLRIRWITR*RVETGSQTSLT
Trigger: AGTCAGAGAGGTCTGGGATCCGGTCTCTACTCTGCATCTGGTGATCCATCTGATTCTCAAAGATAGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp ATCTCCTCTTCATCCGGGACAACAGTGCCGCTCACCAAATCTACTATGACCTCTAGCTATTCTGAGAATTaGTCTTCTGCCCCTGGGATA +
Preference number: 3 (lower is better)
Translates to: ISSSSGTTVPLTKSTMTSSYSEN*SSAPGI
Trigger: TATCCCAGGGGCAGAAGACAAATTCTCAGAATAGCT...AGAGGTCATAGTAGATTTGGTGAGCGGCACTGTTGTCCCGGATGAAGAGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR GCA 72 bp AAGGGAAAGATGGGTATCTCTGCTCTGGTCTCTCTCTaGAGGTTTCTGACTCTTGTCCAGGAGAAATATCCA +
Preference number: 3 (lower is better)
Translates to: KGKMGISALVSL*RFLTLVQEKYP
Trigger: TGGATATTTCTCCTGGACAAGAGTCAGAAACCTGCAGAGAGAGACCAGAGCAGAGATACCCATCTTTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 72 bp CCAGTAAATTCTGTTGAATGTCAGGCCATGAGACAATaGCTTCCAATCTACCCAAAAGGGAGAAGTGACAGC +
Preference number: 3 (lower is better)
Translates to: PVNSVECQAMRQ*LPIYPKGRSDS
Trigger: GCTGTCACTTCTCCCTTTTGGGTAGATTGGAAGTCATTGTCTCATGGCCTGACATTCAACAGAATTTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CCTCCATCTGCCCGGCCAACATTTACTGATTCTCAAAATGAGTTATATTTGGAAAGGATCTCCAAACTGTaGCCTCTTCCAGACAGAGAA +
Preference number: 3 (lower is better)
Translates to: PPSARPTFTDSQNELYLERISKL*PLPDRE
Trigger: TTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCT...TTCCAAATATAACTCATTTTGAGAATCAGTAAATGTTGGCCGGGCAGATGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR-3UTR CAA 90 bp CGAGCAGTGGGTGACATTAATTTCCTATTGAAAATTTGCATCAGAACAAAATTCCTATGCCCTGTTCTCTaGACCCTGTGTCTAGGGGCA +
Preference number: 3 (lower is better)
Translates to: RAVGDINFLLKICIRTKFLCPVL*TLCLGA
Trigger: TGCCCCTAGACACAGGGTCAAGAGAACAGGGCATAG...GAATTTTGTTCTGATGCAAATTTTCAATAGGAAATTAATGTCACCCACTGCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 72 bp AGTCCAAAACCACAAGGATTTTGTAGGAGTGCAATCTaGTCACAACCTAGCCAAGTCTCACACACACACATA +
Preference number: 3 (lower is better)
Translates to: SPKPQGFCRSAI*SQPSQVSHTHI
Trigger: TATGTGTGTGTGTGAGACTTGGCTAGGTTGTGATCAGATTGCACTCCTACAAAATCCTTGTGGTTTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR TCA 72 bp GAAAATTCTGCGTGGAACAGGAGACAGGAGCTATTCTaGGAATTTGTCTTCTGCCCCTGGGATATTATGTTA +
Preference number: 3 (lower is better)
Translates to: ENSAWNRRQELF*EFVFCPWDIML
Trigger: TAACATAATATCCCAGGGGCAGAAGACAAATTCTCAGAATAGCTCCTGTCTCCTGTTCCACGCAGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CCA 72 bp GTAAGTATAGAAACTATCTTTGAAAGGTTAAATGAATaGTCTAAGTCTACAAAACGGCAGAGCAAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: VSIETIFERLNE*SKSTKRQSKGS
Trigger: GGAACCTTTGCTCTGCCGTTTTGTAGACTTAGACCATTCATTTAACCTTTCAAAGATAGTTTCTATACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp GGGAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGAGACGGTCCCCCACCTaGGACGGGCCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GNPVPILHTPGGPALTLERRSPT*DGPRKW
Trigger: CCATTTCCGAGGCCCGTCTCAGGTGGGGGACCGTCT...CTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCAGACGGTCCCCCACCTaGGACGGGCCTCGGAAATGG +
Preference number: 4 (lower is better)
Translates to: WGIHVNIVEPEALRPSLARRSPT*DGPRKW
Trigger: CCATTTCCGAGGCCCGTCTCAGGTGGGGGACCGTCT...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGGTGTCTGCATAGACCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: WCLHRPVAYAGAQPPPHVTSWLI*TSVGFR
Trigger: CCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGT...AACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCTATGCAGACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp CTGCATAGACCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTCAGTCTGCTCCCCACGGTGGTTaGTGTGGCAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: LHRPVAYAGAQPPPHVQSAPHGG*CGRAVP
Trigger: TGGTACTGCCCTGCCACACCAACCACCGTGGGGAGC...AGACTGAACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCTATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp AGACCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTCAGTCTTCTCCTCTCAGCTCCCCACGGTaGTTGGTGTGGCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RPVAYAGAQPPPHVQSSPLSSPR*LVWQGS
Trigger: ACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAG...AGGAGAAGACTGAACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp GCTGCAGGCTGGGCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTGCCGGCTGGCTGCAATaGTGGCCACATTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AAGWATESESSQHCGQAPAGWLQ*WPHSPS
Trigger: GGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGC...AGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGCCCAGCCTGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGGAGTCGTGTCTGCTGCGTCTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGCCACAGACAGAAGCCTaGACAGAGAGTCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: WSRVCCVWLFTPGAGASMPQTEA*TESLPT
Trigger: CGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTGG...CATGGATGCCCCAGCGCCTGGGGTGAACAGCCAGACGCAGCAGACACGACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp CCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: PQHCWEQPCGFVGWIVGGTSWLI*TSVGFR
Trigger: CCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGT...GCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR GCA 90 bp GGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACACCCACTCTGGTCTCCTaGGCAGGTCTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTAMWICGLDCGRPGPWTPTLVS*AGLTAA
Trigger: AGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGG...TGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp AACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCGTCCGGTGTCTCATGGTaGGTGGGCAGCGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: NPVPILHTPGGPALTLESSGVSW*VGSVTD
Trigger: GTCGGTCACGCTGCCCACGCACCATGAGACACCGGA...CGACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GCTTGTCCCACTCTGGTCTCCTGCGCAGGTCTGACAGCAGCTGAAAGACCTGGGCTCAGCTCCCCACGGTaGTTGGTGTGGCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: ACPTLVSCAGLTAAERPGLSSPR*LVWQGS
Trigger: ACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAG...CCCAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp CCTGAGGCTGGGAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGAGAGGGTCTGGAGGCTaGGAGCTAGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: PEAGNPVPILHTPGGPALRGSGG*ELGHSG
Trigger: ACCGGAATGACCTAGCTCCCAGCCTCCAGACCCTCT...CAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTCCCAGCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp GTGTACCACAGCACTGCTGGGAACAGCCATGTGGATTaGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: VYHSTAGNSHVD*WAGLWAARAVD
Trigger: GTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR GCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYTSWLI*TSVGFR
Trigger: CCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGT...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR GCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCAAGGCGCTGTTGATGTaGCGGCGCTGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WGIHVNIVEPEALRPSLAKALLM*RRWVSA
Trigger: AGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTT...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCTCCGGTGTCTCATGGTaGGTGGGCAGCGTGACCGAC +
Preference number: 4 (lower is better)
Translates to: VHPRRWGIHVNIVEPEALSGVSW*VGSVTD
Trigger: GTCGGTCACGCTGCCCACGCACCATGAGACACCGGA...GAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCCAGGGCAGTACCAGCTaGCTCATCTGCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WGIHVNIVEPEALRPSLAQGSTS*LICTSV
Trigger: CACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTG...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp CTTCAGCTTCACCTTGGAGAGCTCCCGGTGGGCCACAAAGGTGGCCAAGGCCTTCAGGGCAGTACCAGCTaGCTCATCTGCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LQLHLGELPVGHKGGQGLQGSTS*LICTSV
Trigger: CACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTG...AAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp GGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGATATCCCGTGACAGAGCCGGCTaGCTGCAATGGTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: GLWAARAVDRTRVYYRISRDRAG*LQWWPH
Trigger: ATGTGGCCACCATTGCAGCCAGCCGGCTCTGTCACG...GGATATCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CCTGGCCTGTGTGGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCCCTGTCACCCTCTCCAGGCTaGGGACGAATCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLCGWGPQSHMVVLWSLSPSPG*GRIQGS
Trigger: GCTGCCCTGGATTCGTCCCCAGCCTGGAGAGGGTGA...CAGGGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CAGATATGCTGGAGCTGTGTCAGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCTCACCCTCTCCAGGCTaGGGACGAATCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QICWSCVRDSGNLCPSSCSPSPG*GRIQGS
Trigger: GCTGCCCTGGATTCGTCCCCAGCCTGGAGAGGGTGA...GCAGCTGGAAGGACACAGGTTGCCGGAGTCCCTGACACAGCTCCAGCATATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGAGGCGGATCTTCTTCCTaGCACTGGCTTCTCGGTATC +
Preference number: 4 (lower is better)
Translates to: GLDCGRPGPWTGPESITGGGSSS*HWLLGI
Trigger: GATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCC...TCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp GAGAGCTCCCGGTGGGCCACAAAGGTGGCCAAGGCCTaGCAGACACTCCACTGCTTCTCAGAGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: ESSRWATKVAKA*QTLHCFSEHRS
Trigger: GGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACCGGGAGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
3UTR CAA 72 bp TCTTTGTCCAGGACCACGAAGGTCATGAAGGCGCTGTaGATGTGCCGGCGCTGGGTCTCAGCTTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSRTTKVMKAL*MCRRWVSASWR
Trigger: CCGCCAGGAAGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTTCATGACCTTCGTGGTCCTGGACAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
3UTR CAA 72 bp AGGCGGACCTCGCTGATCTCCACGGACAGCACCCAGTaGTCCTTGGCCATGAGCGTCTTCAGAGAGGACACG +
Preference number: 4 (lower is better)
Translates to: RRTSLISTDSTQ*SLAMSVFREDT
Trigger: CGTGTCCTCTCTGAAGACGCTCATGGCCAAGGACAACTGGGTGCTGTCCGTGGAGATCAGCGAGGTCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS-3UTR TCA 90 bp AGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACCCTTGGCCATCTCCTCCATGCTGGAGTTaGAGGCCCGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SSPAIPGHVSTPFYPWPSPPCWS*RPGSPW
Trigger: CCAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGG...AGATGGCCAAGGGTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp AACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCGTCTCCTGCGCAGGTCTaGCAGCAGCTGAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: NPVPILHTPGGPALTLESSPAQV*QQLKDL
Trigger: CAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGA...CGACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAAGGTGGCCAAGGCCTTaGAGACACTCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GTAMWICGLDCGRPGPWTRWPRP*RHSTAS
Trigger: AGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCT...TGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGAGTCCCCCGAAGGTATTaGCCTGATGATTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: WEQPCGFVGWIVGGQGRGVPRRY*PDDWRE
Trigger: CTCACGCCAATCATCAGGGCAATACCTTCGGGGGAC...TCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTACAGAGCCGGCTGGCTaGAATGGTGGCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPTEPAG*NGGHIL
Trigger: GAGAATGTGGCCACCATTGCAGCCAGCCGGCTCTGT...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACAGAGCCGGCTGGCTaGAATGGTGGCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: WGIHVNIVEPEALRPSLATEPAG*NGGHIL
Trigger: GAGAATGTGGCCACCATTGCAGCCAGCCGGCTCTGT...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GGTGTCTGCATAGACCAGTCGCATACGCCGGCGCTCAGCCGCCACCCCATGTTCTCTCCAGACTCCGGATaGGAGATTGACTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: GVCIDQSHTPALSRHPMFSPDSG*EIDFRD
Trigger: ATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGA...GAACATGGGGTGGCGGCTGAGCGCCGGCGTATGCGACTGGTCTATGCAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp AGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACCAGGGCAGTACCAGCTaGCTCATCTGCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SGTRSSPAIPGHVSTPFYQGSTS*LICTSV
Trigger: CACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTG...GTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp TCAGCCGCCACCCCATGTTCAGTCTTCTCCTCCTCGGTCAATGGGATGACCTGCCAGGGCAGTACCAGCTaGCTCATCTGCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SAATPCSVFSSSVNGMTCQGSTS*LICTSV
Trigger: CACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTG...GCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGCGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp GCCACCCCATGTTCAGTCTTCTCCTCCTCGGTCAATGGGATGACCTGCTTCAGCCCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATPCSVFSSSVNGMTCFSPRWLV*QGSTSW
Trigger: CCAGCTGGTACTGCCCTGCCACACCAACCACCGTGG...GCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACATGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp ATGATCTTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCCTCAGCTCCCCACGGTaGTTGGTGTGGCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: MILLDIGLQEPEAGNPVPLSSPR*LVWQGS
Trigger: ACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAG...GGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAAGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp AGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACGCTTCAGCTTCACCTTaGAGAGCTCCCGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGTRSSPAIPGHVSTPFYASASP*RAPGGP
Trigger: TGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGC...GTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp TCCTCGGTCAATGGGATGACCTGCTTCAGCTTCACCTaGGAGAGCTCCCGGTGGGCCACAAAGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSVNGMTCFSFT*ESSRWATKVAK
Trigger: CTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR TCA 90 bp AGCTCTCCGGCCATCCCTGGCCACGTTAGCACACCTTTCTACCCTTGGCCATCTTATTCACGATGGCCTTaGGCACCAGACGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSPAIPGHVSTPFYPWPSYSRWP*APDGPP
Trigger: TGGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATA...AGATGGCCAAGGGTAGAAAGGTGTGCTAACGTGGCCAGGGATGGCCGGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp GGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGAACCACCATCTCCAAGTaGAAGGAGAGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLDCGRPGPWTGPESITGTTISK*KERKSS
Trigger: AGAGGACTTCCTCTCCTTTCACTTGGAGATGGTGGT...TCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACTCTCCTGCGCAGGTCTaGCAGCAGCTGAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYSPAQV*QQLKDL
Trigger: CAGGTCTTTCAGCTGCTGTCAGACCTGCGCAGGAGA...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCGTCCCCCGAAGGTATTaGCCTGATGATTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVVPRRY*PDDWRE
Trigger: CTCACGCCAATCATCAGGGCAATACCTTCGGGGGAC...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GCTGCAGGCTGGGCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTAGGGCCACTTCTGCCTaGTTACAGGACACAAGGTAT +
Preference number: 4 (lower is better)
Translates to: AAGWATESESSQHCGQAPRATSA*LQDTRY
Trigger: ATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCT...AGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGCCCAGCCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGGCTCCCCACGGTGGTTaGTGTGGCAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: CTTALLGTAMWICGLDCGAPHGG*CGRAVP
Trigger: TGGTACTGCCCTGCCACACCAACCACCGTGGGGAGC...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp TTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTAGCTTCAGCTTCACCTTaGAGAGCTCCCGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLDIGLQEPEAGNPVPILASASP*RAPGGP
Trigger: TGGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGC...TAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAAGAGGGTCTGGAGGCTaGGAGCTAGGTCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: LAVHPRRWGIHVNIVEPERGSGG*ELGHSG
Trigger: ACCGGAATGACCTAGCTCCCAGCCTCCAGACCCTCT...TTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGCCTGGGGTGAACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp CCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCGGTTCACCTTGGCCTTaGTATTCACCACTTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PQHCWEQPCGFVGWIVGGGSPWP*YSPLGR
Trigger: TCGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACC...GCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp GAGGCCAGCAATTTGTCATGCCTGCCTGAGAGTCACCAGTCACAGCACTTGGAGCCTCCATGCTGGAGTTaGAGGCCCGGTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: EASNLSCLPESHQSQHLEPPCWS*RPGSPW
Trigger: CCAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGG...CTCCAAGTGCTGTGACTGGTGACTCTCAGGCAGGCATGACAAATTGCTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp ATGATCTTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCTATTCACGATGGCCTTaGGCACCAGACGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: MILLDIGLQEPEAGNPVPYSRWP*APDGPP
Trigger: TGGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATA...GGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAAGATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GGGAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTTGCAGACACTCCACTaGTTCTCAGAGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: GNPVPILHTPGGPALTLELQTLH*FSEHRS
Trigger: GGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAA...CTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTAGACAGGGCCACTTCTaGCTGCTTACAGGACACAAG +
Preference number: 4 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPRQGHF*LLTGHK
Trigger: CTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCT...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp CTGTGTTCTGCTCAGGGCAGCCTTGGGTGGGCATGGAAGCGGAGAAAGGGTGGTAGACAGGGCCACTTCTaGCTGCTTACAGGACACAAG +
Preference number: 4 (lower is better)
Translates to: LCSAQGSLGWAWKRRKGGRQGHF*LLTGHK
Trigger: CTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCTGTCT...ACCACCCTTTCTCCGCTTCCATGCCCACCCAAGGCTGCCCTGAGCAGAACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGTTGGAGAGCTCCCGGTaGGCCACAAAGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CTTALLGTAMWICGLDCGLESSR*ATKVAK
Trigger: CTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAA...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CAGATATGCTGGAGCTGTGTCAGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCGGCTGGCTGCAATGGTaGCCACATTCTCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QICWSCVRDSGNLCPSSCGWLQW*PHSPSK
Trigger: CTTGGATGGAGAATGTGGCCACCATTGCAGCCAGCC...GCAGCTGGAAGGACACAGGTTGCCGGAGTCCCTGACACAGCTCCAGCATATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGGCCGGCTGGCTGCAATaGTGGCCACATTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: CTTALLGTAMWICGLDCGAGWLQ*WPHSPS
Trigger: GGATGGAGAATGTGGCCACCATTGCAGCCAGCCGGC...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TCACCAGTCACAGCACTTGGAGCCTGGGATGGAGCTGGCAAACTCAAGAATGGCCGTGACAGAGCCGGCTaGCTGCAATGGTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SPVTALGAWDGAGKLKNGRDRAG*LQWWPH
Trigger: ATGTGGCCACCATTGCAGCCAGCCGGCTCTGTCACG...GCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGATCCAGGGCAGCTTCTaGGGCTGGTCATCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: HRSFRPRVLCSADTSICPIQGSF*GWSSLS
Trigger: GGACAAAGATGACCAGCCTCAGAAGCTGCCCTGGAT...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TTGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTATGCAAGGGACACGTCTaGCTTTCCAGAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLDIGLQEPEAGNPVPILCKGHV*LSRRGG
Trigger: TCCTCCCCTTCTGGAAAGGCAGACGTGTCCCTTGCA...TAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065253.13
CDS-3UTR GCA 90 bp TGGCTACCCTCACCCACAGGTCTGTCATTTGCTTGGGTGGGTAACTTGATTCTCACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: WLPSPTGLSFAWVGNLILTSWLI*TSVGFR
Trigger: CCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGT...GAGAATCAAGTTACCCACCCAAGCAAATGACAGACCTGTGGGTGAGGGTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GCGCTGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGTCAATGGGATGACCTaGTTCAGCTTCACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: ALGHPCEHSGTRSSPAIPVNGMT*FSFTLE
Trigger: CTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGAC...AGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp CAAACCTATCCTGGGCTCTGCCCCAAGATGAACACGTCAAGAGGGGTCCTAAAGCCCACTCTGGTCTCCTaGGCAGGTCTGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTYPGLCPKMNTSRGVLKPTLVS*AGLTAA
Trigger: AGCTGCTGTCAGACCTGCGCAGGAGACCAGAGTGGG...CTTTAGGACCCCTCTTGACGTGTTCATCTTGGGGCAGAGCCCAGGATAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp ATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTATCCTCATCCACTTGCTaGACCAGCTCCACACTCCGG +
Preference number: 4 (lower is better)
Translates to: IHVNIVEPEALRPSLATLSSSTC*TSSTLR
Trigger: CCGGAGTGTGGAGCTGGTGCAGCAAGTGGATGAGGA...TAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GAGTGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTCCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EWGVIRKAKNGGQQFVMPPRWLV*QGSTSW
Trigger: CCAGCTGGTACTGCCCTGCCACACCAACCACCGTGG...AGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TTCAGTCTTCTCCTCCTCGGTCAATGGGATGACCTGCTTCAGCTTCACCTTGGACCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLLLLGQWDDLLQLHLGPRWLV*QGSTSW
Trigger: CCAGCTGGTACTGCCCTGCCACACCAACCACCGTGG...TCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CCA 90 bp CAAACCTATCCTGGGCTCTGCCCCAAGATGAACACGTCAAGAGGGGTCCTAAAGTTGGAGAGCTCCCGGTaGGCCACAAAGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QTYPGLCPKMNTSRGVLKLESSR*ATKVAK
Trigger: CTTGGCCACCTTTGTGGCCCACCGGGAGCTCTCCAA...CTTTAGGACCCCTCTTGACGTGTTCATCTTGGGGCAGAGCCCAGGATAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CAAACCTATCCTGGGCTCTGCCCCAAGATGAACACGTCAAGAGGGGTCCTAAAGTGGGTCTCAGCTTCCTaGCGGTACGCCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: QTYPGLCPKMNTSRGVLKWVSAS*RYASTH
Trigger: GTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCA...CTTTAGGACCCCTCTTGACGTGTTCATCTTGGGGCAGAGCCCAGGATAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp ATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAATCCAGGGCAGCTTCTaGGGCTGGTCATCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: IHVNIVEPEALRPSLATLIQGSF*GWSSLS
Trigger: GGACAAAGATGACCAGCCTCAGAAGCTGCCCTGGAT...TAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TCCTCCCCTAGAGCCACTGTCACAGTGTACCACAGCACTGCTGGGAACAGCCATAGTTGTCCTTGGCCATaGGCGTCTTCAGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: SSPRATVTVYHSTAGNSHSCPWP*ASSERT
Trigger: TGTCCTCTCTGAAGACGCTCATGGCCAAGGACAACT...ATGGCTGTTCCCAGCAGTGCTGTGGTACACTGTGACAGTGGCTCTAGGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTGCCCCGACCTCAGGGCAATaGCATAGGGGTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: WGVIRKAKNGGQQFVMPAPTSGQ*HRGPHC
Trigger: ACAATGGGGACCCCTATGTCATTGCCCTGAGGTCGG...GGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp ATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCACGTTAAGGTGGCCAAGGCCTTaGAGACACTCCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: IHVNIVEPEALRPSLATLRWPRP*RHSTAS
Trigger: AGAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCT...TAACGTGGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAATCTTTGATGGTGTCTaGATAGACCAGTCGCATACG +
Preference number: 4 (lower is better)
Translates to: GTAMWICGLDCGRPGPWTIFDGV*IDQSHT
Trigger: CGTATGCGACTGGTCTATGCAGACACCATCAAAGAT...TGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACCCCACCTCCATGCTGTaGTTAAAGGCGTTATTCACG +
Preference number: 4 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYPTSML*LKALFT
Trigger: CGTGAATAACGCCTTTAAGCACAGCATGGAGGTGGG...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TCCTCCCCTAGAGCCACTGTCACAGTGTACCACAGCACTGCTGGGAACAGCCATTCTCCAGACTCCGGATaGGAGATTGACTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SSPRATVTVYHSTAGNSHSPDSG*EIDFRD
Trigger: ATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGA...ATGGCTGTTCCCAGCAGTGCTGTGGTACACTGTGACAGTGGCTCTAGGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGTCTCCAGACTCCGGATaGGAGATTGACTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: HRSFRPRVLCSADTSICPSPDSG*EIDFRD
Trigger: ATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGA...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp AGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCACCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTRVYYRISQEYWKDLQAPRWLV*QGSTSW
Trigger: CCAGCTGGTACTGCCCTGCCACACCAACCACCGTGG...TGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp AGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGCTCCCCACGGTGGTTaGTGTGGCAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: RTRVYYRISQEYWKDLQAAPHGG*CGRAVP
Trigger: TGGTACTGCCCTGCCACACCAACCACCGTGGGGAGC...TGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp CCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGCTCAGCTCCCCACGGTaGTTGGTGTGGCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PESITGYPRSTGKTCRQMLSSPR*LVWQGS
Trigger: ACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAG...CATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp TGGAAAGACTTGCAGGCAGATGTGAGCAGCAACCGACCATCCAGTAGGATTGGAGGTGGGCCACAAAGGTaGCCAAGGCCTTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: WKDLQADVSSNRPSSRIGGGPQR*PRPCRH
Trigger: GTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACC...TCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp CGGGTCTTCTCGGCTGGCACCATATTGCTGCAGTCCTaGTCCAAATCGTCCTGGATGACACAGTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: RVFSAGTILLQS*SKSSWMTQWVR
Trigger: CCTAACCCACTGTGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGGTGCCAGCCGAGAAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS-3UTR TCA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGGGTTCACCTTGGCCTTaGTATTCACCACTTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CTTALLGTAMWICGLDCGGSPWP*YSPLGR
Trigger: TCGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACC...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp CCTGGCCTGTGTGGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCCCTGGGGTTAGGAGATCTTTaGTGGTGTCTGCATAGACCA +
Preference number: 4 (lower is better)
Translates to: PGLCGWGPQSHMVVLWSLGLGDL*WCLHRP
Trigger: TGGTCTATGCAGACACCATCAAAGATCTCCTAACCC...CAGGGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGGAAAGACTTGCAGGCAGATGTGAGCAGCAACCGACCATCCAGTAGGATTGGACCGACCTCAGGGCAATaGCATAGGGGTCCCCATTGT +
Preference number: 4 (lower is better)
Translates to: WKDLQADVSSNRPSSRIGPTSGQ*HRGPHC
Trigger: ACAATGGGGACCCCTATGTCATTGCCCTGAGGTCGG...TCCAATCCTACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp ATCTCCTCTTCATCCGGGACAACAGTGCCGCTCACCAAATCTACTATGACCTCTCAGGGACAGCCAGCATaGCTCTCCGCTGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSSSGTTVPLTKSTMTSQGQPA*LSADRQ
Trigger: CTGCCTATCAGCGGAGAGGCATGCTGGCTGTCCCTG...AGAGGTCATAGTAGATTTGGTGAGCGGCACTGTTGTCCCGGATGAAGAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp CCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGAAGGCGCTGTTGATGTaGCGGCGCTGGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PESITGYPRSTGKTCRQMKALLM*RRWVSA
Trigger: AGCTGAGACCCAGCGCCGGCACATCAACAGCGCCTT...CATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GGGCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCACAGAAGGGCCACTTCTGCCTaGTTACAGGACACAAGGTAT +
Preference number: 4 (lower is better)
Translates to: GLARRDAGQWLSGADGHRRATSA*LQDTRY
Trigger: ATACCTTGTGTCCTGTAAGCAGGCAGAAGTGGCCCT...TCTGTGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp GAGTGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTTCCTCATCCACTTGCTaGACCAGCTCCACACTCCGG +
Preference number: 4 (lower is better)
Translates to: EWGVIRKAKNGGQQFVMPSSSTC*TSSTLR
Trigger: CCGGAGTGTGGAGCTGGTGCAGCAAGTGGATGAGGA...AGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GACCATCCAGTAGGATTGGACCATCTAGTGTGGAAGGCTTCCCTGGGGAGTCAATCATCTGCACCTCCGTaGGGTTCCGGTATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: DHPVGLDHLVWKASLGSQSSAPP*GSGILH
Trigger: GTGAAGGATACCGGAACCCCACGGAGGTGCAGATGA...TTGACTCCCCAGGGAAGCCTTCCACACTAGATGGTCCAATCCTACTGGATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp AGCCTACAAGAAGGGAAAGATGGGTATCTCTGCTCTGGTCTCTCTCTGCAGGTTGGTGGGCCACAAAGGTaGCCAAGGCCTTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SLQEGKDGYLCSGLSLQVGGPQR*PRPCRH
Trigger: GTGTCTGCAAGGCCTTGGCCACCTTTGTGGCCCACC...AACCTGCAGAGAGAGACCAGAGCAGAGATACCCATCTTTCCCTTCTTGTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACTTGTCCAAATCGTCCTaGATGACACAGTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYLSKSS*MTQWVR
Trigger: CCTAACCCACTGTGTCATCCAGGACGATTTGGACAA...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp AGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCATGGGTCTCAGCTTCCTaGCGGTACGCCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: RTRVYYRISQEYWKDLQAWVSAS*RYASTH
Trigger: GTGTGTGGAGGCGTACCGCCAGGAAGCTGAGACCCA...TGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp TGTACTCTTCTGGGCACTGGCTGGTCACTGCTTCCATaGGTGGGTAACTCAGAAACAGACATCCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CTLLGTGWSLLP*VGNSETDIPGV
Trigger: CACCCCTGGGATGTCTGTTTCTGAGTTACCCACCAATGGAAGCAGTGACCAGCCAGTGCCCAGAAGAGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 72 bp ACACTCTCCACTCGGGTCTTCTCGGCTGGCACCATATaGCTGCAGTCCTTGTCCAAATCGTCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: TLSTRVFSAGTI*LQSLSKSSWMT
Trigger: TGTCATCCAGGACGATTTGGACAAGGACTGCAGCAATATGGTGCCAGCCGAGAAGACCCGAGTGGAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS-3UTR TCA 90 bp AGCCTACAAGAAGGGAAAGATGGGTATCTCTGCTCTGGTCTCTCTCTGCAGGTTCCACAGACAGAAGCCTaGACAGAGAGTCTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SLQEGKDGYLCSGLSLQVPQTEA*TESLPT
Trigger: CGTGGGGAGACTCTCTGTTCAGGCTTCTGTCTGTGG...AACCTGCAGAGAGAGACCAGAGCAGAGATACCCATCTTTCCCTTCTTGTAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGCAGGGACAGCCAGCATaGCTCTCCGCTGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVYYRISQEYWKDLQADVQGQPA*LSADRQ
Trigger: CTGCCTATCAGCGGAGAGGCATGCTGGCTGTCCCTG...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGCTGGACATTGGCCTCCAGGAACCTGAGGCTGGGAACCCTGTACCCATCCTACTCCTGGATGACACAGTaGGTTAGGAGATCTTTGATG +
Preference number: 4 (lower is better)
Translates to: CWTLASRNLRLGTLYPSYSWMTQ*VRRSLM
Trigger: CATCAAAGATCTCCTAACCCACTGTGTCATCCAGGA...GTAGGATGGGTACAGGGTTCCCAGCCTCAGGTTCCTGGAGGCCAATGTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TGGGATGGAGCTGGCAAACTCAAGAATGGCTGGTGCCTCTTGATCTATCCCCATGACGGGCCTCGGAAATaGAACATCTCGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: WDGAGKLKNGWCLLIYPHDGPRK*NISMAL
Trigger: CAAGGCCATCGAGATGTTCCATTTCCGAGGCCCGTC...ATGGGGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp GATGGAGCTGGCAAACTCAAGAATGGCTGGTGCCTCTaGATCTATCCCCATGACATGCCCCCATGTATGTCC +
Preference number: 4 (lower is better)
Translates to: DGAGKLKNGWCL*IYPHDMPPCMS
Trigger: GGACATACATGGGGGCATGTCATGGGGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR TCA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCAGTTGTCCTTGGCCATaGGCGTCTTCAGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: TSHDDRISKLLPLPDREGSCPWP*ASSERT
Trigger: TGTCCTCTCTGAAGACGCTCATGGCCAAGGACAACT...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp TGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTGCCACCACCATCTCCAAGTaGAAGGAGAGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WGVIRKAKNGGQQFVMPATTISK*KERKSS
Trigger: AGAGGACTTCCTCTCCTTTCACTTGGAGATGGTGGT...GGCAGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TCACCAGTCACAGCACTTGGAGCCTGGGATGGAGCTGGCAAACTCAAGAATGGCTTGTCCAAATCGTCCTaGATGACACAGTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SPVTALGAWDGAGKLKNGLSKSS*MTQWVR
Trigger: CCTAACCCACTGTGTCATCCAGGACGATTTGGACAA...GCCATTCTTGAGTTTGCCAGCTCCATCCCAGGCTCCAAGTGCTGTGACTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp TCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCATGGGCTGGCTGCAATGGTaGCCACATTCTCCATCCAAG +
Preference number: 4 (lower is better)
Translates to: SHDDRISKLLPLPDREGMGWLQW*PHSPSK
Trigger: CTTGGATGGAGAATGTGGCCACCATTGCAGCCAGCC...CATGCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGGGATGGAGCTGGCAAACTCAAGAATGGCTGGTGCCTCTTGATCTATCCCCATTTGCAGACACTCCACTaGTTCTCAGAGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: WDGAGKLKNGWCLLIYPHLQTLH*FSEHRS
Trigger: GGATCTGTGCTCTGAGAAGCAGTGGAGTGTCTGCAA...ATGGGGATAGATCAAGAGGCACCAGCCATTCTTGAGTTTGCCAGCTCCATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCGTCAATGGGATGACCTaGTTCAGCTTCACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TSHDDRISKLLPLPDREGVNGMT*FSFTLE
Trigger: CTCCAAGGTGAAGCTGAAGCAGGTCATCCCATTGAC...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTCTCCAGACTCCGGATaGGAGATTGACTTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PESITGYPRSTGKTCRQMSPDSG*EIDFRD
Trigger: ATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGA...CATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CCA 90 bp GCTATTCTGAGAATTTGTCTTCTGCCCCTGGGATATTATGTTATCCAAGCGATGGCTCCCCACGGTGGTTaGTGTGGCAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: AILRICLLPLGYYVIQAMAPHGG*CGRAVP
Trigger: TGGTACTGCCCTGCCACACCAACCACCGTGGGGAGC...CATCGCTTGGATAACATAATATCCCAGGGGCAGAAGACAAATTCTCAGAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGGGCGGATCTTCTTCCTaGCACTGGCTTCTCGGTATC +
Preference number: 4 (lower is better)
Translates to: RVYYRISQEYWKDLQADVGGSSS*HWLLGI
Trigger: GATACCGAGAAGCCAGTGCCAGGAAGAAGATCCGCC...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp TACACAAGGCAATTTGTGGAGAGTGGTCCCTTCACATaGGCAATTTTGGGTCCCACAGTGAACACCACCCGG +
Preference number: 4 (lower is better)
Translates to: YTRQFVESGPFT*AILGPTVNTTR
Trigger: CCGGGTGGTGTTCACTGTGGGACCCAAAATTGCCAATGTGAAGGGACCACTCTCCACAAATTGCCTTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
3UTR CAA 72 bp AAGGAGTCACATCAGATTCCACTCCTATTGAGGGAGTaGTGCCTGGGAAAGGGAGGAGACAAGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KESHQIPLLLRE*CLGKGGDKLWS
Trigger: GCTCCAAAGCTTGTCTCCTCCCTTTCCCAGGCACAACTCCCTCAATAGGAGTGGAATCTGATGTGACTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR TCA 90 bp GAGTGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTAGTGTTGTAGAATTCTaGGGACAGGCCGGACACATT +
Preference number: 4 (lower is better)
Translates to: EWGVIRKAKNGGQQFVMPSVVEF*GQAGHI
Trigger: AATGTGTCCGGCCTGTCCTCAGAATTCTACAACACT...AGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCATGCCCACCTCCATGCTGTaGTTAAAGGCGTTATTCACG +
Preference number: 4 (lower is better)
Translates to: SHDDRISKLLPLPDREGMPTSML*LKALFT
Trigger: CGTGAATAACGCCTTTAAGCACAGCATGGAGGTGGG...CATGCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
3UTR CAA 72 bp GTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTaGCAGGCAGATGTGAGCAGCAACCGACCATCCAGT +
Preference number: 4 (lower is better)
Translates to: VYYRISQEYWKD*QADVSSNRPSS
Trigger: ACTGGATGGTCGGTTGCTGCTCACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR TCA 90 bp ATCTCCTCTTCATCCGGGACAACAGTGCCGCTCACCAAATCTACTATGACCTCTAGTGTTGTAGAATTCTaGGGACAGGCCGGACACATT +
Preference number: 4 (lower is better)
Translates to: ISSSSGTTVPLTKSTMTSSVVEF*GQAGHI
Trigger: AATGTGTCCGGCCTGTCCTCAGAATTCTACAACACT...AGAGGTCATAGTAGATTTGGTGAGCGGCACTGTTGTCCCGGATGAAGAGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR GCA 90 bp TGGCTACCCTCACCCACAGGTCTGTCATTTGCTTGGGTGGGTAACTTGATTCTCATCTTTGATGGTGTCTaGATAGACCAGTCGCATACG +
Preference number: 4 (lower is better)
Translates to: WLPSPTGLSFAWVGNLILIFDGV*IDQSHT
Trigger: CGTATGCGACTGGTCTATGCAGACACCATCAAAGAT...GAGAATCAAGTTACCCACCCAAGCAAATGACAGACCTGTGGGTGAGGGTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp ACGTCCCATGATGACAGGATCTCCAAACTGTTGCCTCTTCCAGACAGAGAAGGCTCCTGGATGACACAGTaGGTTAGGAGATCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TSHDDRISKLLPLPDREGSWMTQ*VRRSLM
Trigger: CATCAAAGATCTCCTAACCCACTGTGTCATCCAGGA...GCCTTCTCTGTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CCA 90 bp GCTATTCTGAGAATTTGTCTTCTGCCCCTGGGATATTATGTTATCCAAGCGATGGACGGGCCTCGGAAATaGAACATCTCGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AILRICLLPLGYYVIQAMDGPRK*NISMAL
Trigger: CAAGGCCATCGAGATGTTCCATTTCCGAGGCCCGTC...CATCGCTTGGATAACATAATATCCCAGGGGCAGAAGACAAATTCTCAGAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTGGCCTCCTCCCCACGGACAGCACCCAGTaGTCCTTGGCCATGAGCGTC +
Preference number: 5 (lower is better)
Translates to: ATESESSQHCGQAPGLLPTDSTQ*SLAMSV
Trigger: GACGCTCATGGCCAAGGACAACTGGGTGCTGTCCGT...GGGGAGGAGGCCAGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp TGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGATGCTTCAGCTTCACCTaGGAGAGCTCCCGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: WEQPCGFVGWIVGGQGRGCFSFT*ESSRWA
Trigger: GGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCA...TCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS TCA 90 bp GCGAAGCCCTGTCCTAGGAAAGTGCAGGGAGGCGACCTACGGAGCTaGGATGCAAGGGACACGTCTGCCTTTCCAGAAGGGGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: AKPCPRKVQGGDLRS*DARDTSAFPEGEER
Trigger: CCGCTCCTCCCCTTCTGGAAAGGCAGACGTGTCCCTTGCATCTCAGCTCCGTAGGTCGCCTCCCTGCACTTTCCTAGGACAGGGCTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065253.13
CDS GCA 90 bp TCCCCACGGTGGTTGGTGTGGCAGGGCAGTACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGGTATCCTTCACCCTCTGCCATGGTA +
Preference number: 5 (lower is better)
Translates to: SPRWLVWQGSTSWLI*TSVGFRYPSPSAMV
Trigger: TACCATGGCAGAGGGTGAAGGATACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS CCA 90 bp ATGCTCAGCTCCCCACGGTGGTTGGTGTGGCAGGGCAGTACCAGCTaGCTCATCTGCACCTCCGTGGGGTTCCGGTATCCTTCACCCTCT +
Preference number: 5 (lower is better)
Translates to: MLSSPRWLVWQGSTS*LICTSVGFRYPSPS
Trigger: AGAGGGTGAAGGATACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS CCA 90 bp CACTTGAGCAACTGTCCAATGCTCAGCTCCCCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGGCTCATCTGCACCTCCGTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: HLSNCPMLSSPRWLV*QGSTSWLICTSVGF
Trigger: GAACCCCACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS-3UTR CAA 90 bp GCCACTGAGTCAGAGTCCAGCCAACACTGTGGCCAGGCTCCTGGCCTCCTCCCCGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: ATESESSQHCGQAPGLLPVVSIH*SNCPML
Trigger: GAGCATTGGACAGTTGCTCAAGTGGATCGACACCAC...GGGGAGGAGGCCAGGAGCCTGGCCACAGTGTTGGCTGGACTCTGACTCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CAA 90 bp GGGCTGGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGACGGTTCACCTTGGCCTaGATATTCACCACTTGGCCG +
Preference number: 5 (lower is better)
Translates to: GLDCGRPGPWTGPESITGRFTLA*IFTTWP
Trigger: CGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACCG...TCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCAGGGCCGTGGACATTATTCACGATGGCCTaGAGCACCAGACGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GTAMWICGLDCGRPGPWTLFTMA*STRRSP
Trigger: GGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATAA...TGTCCACGGCCCTGGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CCTGAGGCTGGGAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGGTCATCCTCATCCACTaGCTGCACCAGCTCCACACT +
Preference number: 5 (lower is better)
Translates to: PEAGNPVPILHTPGGPALVILIH*LHQLHT
Trigger: AGTGTGGAGCTGGTGCAGCAAGTGGATGAGGATGAC...CAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTCCCAGCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GCTGGAGCTGTGTCAGGGACTCCGGCAACCTGTGTCCTTCCAGCTGCAGGCTGGGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: AGAVSGTPATCVLPAAGWVVSIH*SNCPML
Trigger: GAGCATTGGACAGTTGCTCAAGTGGATCGACACCAC...CCAGCCTGCAGCTGGAAGGACACAGGTTGCCGGAGTCCCTGACACAGCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS-3UTR CAA 90 bp TGGAGTCGTGTCTGCTGCGTCTGGCTGTTCACCCCAGGCGCTGGGGCATCCATGAAGGCCCGGTTCACCTaGGCCTTGATATTCACCACT +
Preference number: 5 (lower is better)
Translates to: WSRVCCVWLFTPGAGASMKARFT*ALIFTT
Trigger: AGTGGTGAATATCAAGGCCAAGGTGAACCGGGCCTT...CATGGATGCCCCAGCGCCTGGGGTGAACAGCCAGACGCAGCAGACACGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCTTATTCACGATGGCCTaGAGCACCAGACGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVLFTMA*STRRSP
Trigger: GGGGGACCGTCTGGTGCTCAAGGCCATCGTGAATAA...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp TGGGGCATCCATGTGAACATAGTGGAACCCGAAGCTCTCCGGCCATCCCTGGCCCTCAGGTATACCTGGTaGCTAGGGTCCCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: WGIHVNIVEPEALRPSLALRYTW*LGSQGT
Trigger: TGTCCCCTGGGACCCTAGCAACCAGGTATACCTGAG...GGCCAGGGATGGCCGGAGAGCTTCGGGTTCCACTATGTTCACATGGATGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GAACCCTGTACCCATCCTACACACCCCAGGTGGCCCTGCTCTGACACTGGAGTCCTCAGGTATACCTGGTaGCTAGGGTCCCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: EPCTHPTHPRWPCSDTGVLRYTW*LGSQGT
Trigger: TGTCCCCTGGGACCCTAGCAACCAGGTATACCTGAG...GACTCCAGTGTCAGAGCAGGGCCACCTGGGGTGTGTAGGATGGGTACAGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GGATTGTGGGCGGCCAGGGCCGTGGACAGGACCCGAGTCTATTACAGGATATCCCGGTTCACCTTGGCCTaGATATTCACCACTTGGCCG +
Preference number: 5 (lower is better)
Translates to: GLWAARAVDRTRVYYRISRFTLA*IFTTWP
Trigger: CGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACCG...GGATATCCTGTAATAGACTCGGGTCCTGTCCACGGCCCTGGCCGCCCACAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CACCGGGCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCAACCTCCATGCTGGAGTaGAAGGCCCGGTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: HRAGPKRCWTVVIRSRWSTSMLE*KARFTL
Trigger: CAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGGT...TGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGCCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CCTGGCCTGTGTGGGTGGGGTCCACAGTCTCACATGGTAGTTTTGTGGTCCCTGAAGGTGGCCAAGGCCTaGCAGACACTCCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: PGLCGWGPQSHMVVLWSLKVAKA*QTLHCF
Trigger: GAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTT...CAGGGACCACAAAACTACCATGTGAGACTGTGGACCCCACCCACACAGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGCGGCCGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: HSTAGNSHVDLWAGLWAAVVSIH*SNCPML
Trigger: GAGCATTGGACAGTTGCTCAAGTGGATCGACACCAC...GGCCGCCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
CDS TCA 90 bp ACCCTCTGCCATGGTAGGAGGGTCTCCAGACTCCGGATGGGAGATTaGCTTCCGGGATGTGCGATTAGAGAACATAGAGGCGAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: TLCHGRRVSRLRMGD*LPGCAIREHRGEAL
Trigger: CAGGGCTTCGCCTCTATGTTCTCTAATCGCACATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGACCCTCCTACCATGGCAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065253.13
CDS TCA 90 bp ACCCTCTGCCATGGTAGGAGGGTCTCCAGACTCCGGATGGGAGATTaGCTTCCGGGATGTGCGATTAGAGAACATAGAGGCGAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: TLCHGRRVSRLRMGD*LPGCAIREHRGEAP
Trigger: AGGGGCTTCGCCTCTATGTTCTCTAATCGCACATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGACCCTCCTACCATGGCAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102762.10
ENSMUST00000156567.2
CDS-3UTR CAA 90 bp TGTACCACAGCACTGCTGGGAACAGCCATGTGGATTTGTGGGCTGGATTGTGGGAAGGTGGCCAAGGCCTaGCAGACACTCCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: CTTALLGTAMWICGLDCGKVAKA*QTLHCF
Trigger: GAAGCAGTGGAGTGTCTGCAAGGCCTTGGCCACCTT...CCCACAATCCAGCCCACAAATCCACATGGCTGTTCCCAGCAGTGCTGTGGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CACAGGTCTTTCCGTCCTCGAGTTTTGTGCTCTGCAGACACCTCCATCTGCCCGAGCACCCAGTTGTCCTaGGCCATGAGCGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: HRSFRPRVLCSADTSICPSTQLS*AMSVFR
Trigger: TCTGAAGACGCTCATGGCCAAGGACAACTGGGTGCT...CGGGCAGATGGAGGTGTCTGCAGAGCACAAAACTCGAGGACGGAAAGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GGGCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCACAGAGTCATCCTCATCCACTaGCTGCACCAGCTCCACACT +
Preference number: 5 (lower is better)
Translates to: GLARRDAGQWLSGADGHRVILIH*LHQLHT
Trigger: AGTGTGGAGCTGGTGCAGCAAGTGGATGAGGATGAC...TCTGTGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS CCA 90 bp TATCCTTCACCCTCTGCCATGGTAGGAGGGTCTCCAGACTCCGGATaGGAGATTGACTTCCGGGATGTGCGATTAGAGAACATAGAGGCG +
Preference number: 5 (lower is better)
Translates to: YPSPSAMVGGSPDSG*EIDFRDVRLENIEA
Trigger: CGCCTCTATGTTCTCTAATCGCACATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGACCCTCCTACCATGGCAGAGGGTGAAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CAA 90 bp CGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGTGTGCTTCAGCTTCACCTaGGAGAGCTCCCGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: RVYYRISQEYWKDLQADVCFSFT*ESSRWA
Trigger: GGCCCACCGGGAGCTCTCCAAGGTGAAGCTGAAGCA...CACATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GCTGGCCCGAAGAGATGCTGGACAGTGGTTATCAGGAGCAGATGGTCACAGATAAGCACCCAGTTGTCCTaGGCCATGAGCGTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AGPKRCWTVVIRSRWSQISTQLS*AMSVFR
Trigger: TCTGAAGACGCTCATGGCCAAGGACAACTGGGTGCT...TATCTGTGACCATCTGCTCCTGATAACCACTGTCCAGCATCTCTTCGGGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp TGTTCAGTCTTCTCCTCCTCGGTCAATGGGATGACCTGCTTCAGCTTCACCTTGGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTC +
Preference number: 5 (lower is better)
Translates to: CSVFSSSVNGMTCFSFTLVVSIH*SNCPML
Trigger: GAGCATTGGACAGTTGCTCAAGTGGATCGACACCAC...CAAGGTGAAGCTGAAGCAGGTCATCCCATTGACCGAGGAGGAGAAGACTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS-3UTR CAA 90 bp GAGTGGGGAGTGATTAGGAAGGCCAAGAATGGAGGCCAGCAATTTGTCATGCCTAAGGCCCGGTTCACCTaGGCCTTGATATTCACCACT +
Preference number: 5 (lower is better)
Translates to: EWGVIRKAKNGGQQFVMPKARFT*ALIFTT
Trigger: AGTGGTGAATATCAAGGCCAAGGTGAACCGGGCCTT...AGGCATGACAAATTGCTGGCCTCCATTCTTGGCCTTCCTAATCACTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp GCTATTCTGAGAATTTGTCTTCTGCCCCTGGGATATTATGTTATCCAAGCGATGACGGACAGCACCCAGTaGTCCTTGGCCATGAGCGTC +
Preference number: 5 (lower is better)
Translates to: AILRICLLPLGYYVIQAMTDSTQ*SLAMSV
Trigger: GACGCTCATGGCCAAGGACAACTGGGTGCTGTCCGT...CATCGCTTGGATAACATAATATCCCAGGGGCAGAAGACAAATTCTCAGAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102762.10
CDS-3UTR CAA 90 bp CCCGAGTCTATTACAGGATATCCCAGGAGTACTGGAAAGACTTGCAGGCAGATGCTTGATATTCACCACTaGGCCGACACTAATGGTATG +
Preference number: 5 (lower is better)
Translates to: PESITGYPRSTGKTCRQMLDIHH*ADTNGM
Trigger: CATACCATTAGTGTCGGCCAAGTGGTGAATATCAAG...CATCTGCCTGCAAGTCTTTCCAGTACTCCTGGGATATCCTGTAATAGACTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS GCA 72 bp AGGCGACCTACGGAGCTGAGATGCAAGGGACACGTCTaGCTTTCCAGAAGGGGAGGAGCGGCGCGCGCGCAT +
Preference number: 6 (lower is better)
Translates to: RRPTELRCKGHV*LSRRGGAARAH
Trigger: ATGCGCGCGCGCCGCTCCTCCCCTTCTGGAAAGGCAGACGTGTCCCTTGCATCTCAGCTCCGTAGGTCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065253.13
CDS GCA 72 bp CTGCACCTCCGTGGGGTTCCGGTATCCTTCACCCTCTaGCATGGTAGGAGGGTCTCCAGACTCCGGATGGGA +
Preference number: 6 (lower is better)
Translates to: LHLRGVPVSFTL*HGRRVSRLRMG
Trigger: TCCCATCCGGAGTCTGGAGACCCTCCTACCATGGCAGAGGGTGAAGGATACCGGAACCCCACGGAGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS GCA 72 bp TGGTTGGTGTGGCAGGGCAGTACCAGCTGGCTCATCTaGACCTCCGTGGGGTTCCGGTATCCTTCACCCTCT +
Preference number: 6 (lower is better)
Translates to: WLVWQGSTSWLI*TSVGFRYPSPS
Trigger: AGAGGGTGAAGGATACCGGAACCCCACGGAGGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS CCA 72 bp AACTGTCCAATGCTCAGCTCCCCACGGTGGTTGGTGTaGCAGGGCAGTACCAGCTGGCTCATCTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: NCPMLSSPRWLV*QGSTSWLICTS
Trigger: GGAGGTGCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCATTGGACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS GCA 72 bp TCATCCATAGAGGCTGTGACGCAGGGACAGCCAGCATaGCTCTCCGCTGATAGGCAGGCTGTGGTGTCGATC +
Preference number: 6 (lower is better)
Translates to: SSIEAVTQGQPA*LSADRQAVVSI
Trigger: GATCGACACCACAGCCTGCCTATCAGCGGAGAGGCATGCTGGCTGTCCCTGCGTCACAGCCTCTATGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000145061.8
ENSMUST00000148688.2
CDS CCA 72 bp CACTTGAGCAACTGTCCAATGCTCAGCTCCCCACGGTaGTTGGTGTGGCAGGGCAGTACCAGCTGGCTCATC +
Preference number: 6 (lower is better)
Translates to: HLSNCPMLSSPR*LVWQGSTSWLI
Trigger: GATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS CAA 72 bp TTGAGCAACTGTCCAATGCTCAGCTCCCCACGGTGGTaGGTGTGGCAGGGCAGTACCAGCTGGCTCATCTGC +
Preference number: 6 (lower is better)
Translates to: LSNCPMLSSPRW*VWQGSTSWLIC
Trigger: GCAGATGAGCCAGCTGGTACTGCCCTGCCACACCAACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000145061.8
ENSMUST00000148688.2
ENSMUST00000156567.2
CDS CAA 72 bp CTCTCCGCTGATAGGCAGGCTGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTCAGCTCCCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: LSADRQAVVSIH*SNCPMLSSPRW
Trigger: CCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000145061.8
ENSMUST00000148688.2
CDS CAA 72 bp GCCGACACTGATAGGCAGGCTGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTCAGCTCCCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: ADTDRQAVVSIH*SNCPMLSSPRW
Trigger: CCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGTGTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS TCA 72 bp TCTCCGCTGATAGGCAGGCTGTGGTGTCGATCCACTTaGGCAACTGTCCAATGCTCAGCTCCCCACGGTGGT +
Preference number: 6 (lower is better)
Translates to: SPLIGRLWCRST*ATVQCSAPHGG
Trigger: ACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGCGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000145061.8
ENSMUST00000148688.2
CDS TCA 72 bp CCGACACTGATAGGCAGGCTGTGGTGTCGATCCACTTaGGCAACTGTCCAATGCTCAGCTCCCCACGGTGGT +
Preference number: 6 (lower is better)
Translates to: PTLIGRLWCRST*ATVQCSAPHGG
Trigger: ACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140541.8
CDS TCA 72 bp TCCCACCTGATAGGCAGGCTGTGGTGTCGATCCACTTaGGCAACTGTCCAATGCTCAGCTCCCCACGGTGGT +
Preference number: 6 (lower is better)
Translates to: SHLIGRLWCRST*ATVQCSAPHGG
Trigger: ACCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156567.2
CDS CAA 72 bp TTCCCACCTGATAGGCAGGCTGTGGTGTCGATCCACTaGAGCAACTGTCCAATGCTCAGCTCCCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: FPPDRQAVVSIH*SNCPMLSSPRW
Trigger: CCACCGTGGGGAGCTGAGCATTGGACAGTTGCTCAAGTGGATCGACACCACAGCCTGCCTATCAGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156567.2
CDS CAA 90 bp CACAGATCCTCAGAGACCACCTGGATTCCCACCTCCATGCTGGAGTaGAAGGCCCGGTTCACCTTGGCCTTGATATTCACCACTTGGCCG +
Preference number: 6 (lower is better)
Translates to: HRSSETTWIPTSMLE*KARFTLALIFTTWP
Trigger: CGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGGTGGGAATCCAGGTGGTCTCTGAGGATCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS CAA 72 bp TCAGAGACCACCTGGATTCCCACCTCCATGCTGGAGTaGAAGGCCCGGTTCACCTTGGCCTTGATATTCACC +
Preference number: 6 (lower is better)
Translates to: SETTWIPTSMLE*KARFTLALIFT
Trigger: GGTGAATATCAAGGCCAAGGTGAACCGGGCCTTCAACTCCAGCATGGAGGTGGGAATCCAGGTGGTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
CDS TCA 72 bp CATGGTAGGAGGGTCTCCAGACTCCGGATGGGAGATTaGCTTCCGGGATGTGCGATTAGAGAACATAGAGGC +
Preference number: 6 (lower is better)
Translates to: HGRRVSRLRMGD*LPGCAIREHRG
Trigger: GCCTCTATGTTCTCTAATCGCACATCCCGGAAGTCAATCTCCCATCCGGAGTCTGGAGACCCTCCTACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10
ENSMUST00000140541.8
ENSMUST00000156567.2
CDS CAA 72 bp TCCATGCTGGAGTTGAAGGCCCGGTTCACCTTGGCCTaGATATTCACCACTTGGCCGACACTAATGGTATGG +
Preference number: 6 (lower is better)
Translates to: SMLELKARFTLA*IFTTWPTLMVW
Trigger: CCATACCATTAGTGTCGGCCAAGTGGTGAATATCAAGGCCAAGGTGAACCGGGCCTTCAACTCCAGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065253.13
ENSMUST00000102762.10