Pregenerated sensors for ACOD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022126Ensembl transcript IDs: ENSMUST00000022722.7
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCCTGTCTGGATAAGTCATGGGCAGACCAAGCTTGCTCCATCTaGAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: APCLDKSWADQACSI*SQPARSTSSTSVKF Trigger: GAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCTGCCCATGACTTATCCAGACAGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR CCA 90 bp | CAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGTTTCTaGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: QIIDKPLSIYACLCF*TLYFAELIAGKVEQ Trigger: CTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAACAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR-3UTR TCA 90 bp | AGACCAAGCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCGACTCTCTACTTTGCTaGGCTCATTGCTGGGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RPSLLHLQPASTFHFLYIDSLLC*AHCWEG Trigger: ACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTC...GATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR CAA 90 bp | ATTTTCTACTCCTATGAACTGAGAACTGATATATTCTTGCTGGAGTaGTCAAATGGCTACCCACACTATTTCCCTGAGGATGCTCGCCAG | + |
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Preference number: 2 (lower is better) Translates to: IFYSYELRTDIFLLE*SNGYPHYFPEDARQ Trigger: CTGGCGAGCATCCTCAGGGAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAGTTCATAGGAGTAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCGCTTGTCTCTGTTTCTaGACTCTCTACTTTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LRTDIFLLELSNGYPHYFACLCF*TLYFAE Trigger: CTCAGCAAAGTAGAGAGTCCAGAAACAGAGACAAGC...GAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR CCA 72 bp | AGAGGGGTTGGTTGGGCACCCTGTCTGGATAAGTCATaGGCAGACCAAGCTTGCTCCATCTGCAGCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RGVGWAPCLDKS*ADQACSICSQP Trigger: TGGCTGGCTGCAGATGGAGCAAGCTTGGTCTGCCCATGACTTATCCAGACAGGGTGCCCAACCAACCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR GCA 72 bp | CTGGATAAGTCATGGGCAGACCAAGCTTGCTCCATCTaGAGCCAGCCAGCACGTTCCACTTCCTCTACATCT | + |
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Preference number: 3 (lower is better) Translates to: LDKSWADQACSI*SQPARSTSSTS Trigger: AGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCTGCCCATGACTTATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR TCA 72 bp | ATGCCACACTGCTTCACCACCCCAAGTCAAACTGTCTaGTCTGCAGTAGAGAAGCTGAGCAGAAGGATTCTT | + |
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Preference number: 3 (lower is better) Translates to: MPHCFTTPSQTV*SAVEKLSRRIL Trigger: AAGAATCCTTCTGCTCAGCTTCTCTACTGCAGATCAGACAGTTTGACTTGGGGTGGTGAAGCAGTGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR GCA 72 bp | ACACTGCTTCACCACCCCAAGTCAAACTGTCTGATCTaGAGTAGAGAAGCTGAGCAGAAGGATTCTTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: TLLHHPKSNCLI*SREAEQKDSWL Trigger: TAGCCAAGAATCCTTCTGCTCAGCTTCTCTACTGCAGATCAGACAGTTTGACTTGGGGTGGTGAAGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR-3UTR CAA 90 bp | GACTGGTTTTTATCAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGACTTTGCTGAGCTCATaGCTGGGAAGGTGGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: DWFLSNYRQASFHIRLSLTLLSS*LGRWSR Trigger: CCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGT...CAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTGATAAAAACCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR-3UTR CAA 90 bp | GACTGGTTTTTATCAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGTCTGGACTCTCTACTTaGCTGAGCTCATTGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: DWFLSNYRQASFHIRLSLSGLST*LSSLLG Trigger: TCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGA...CAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTGATAAAAACCAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTCTCACGGCTGCAGCTaGATCTGCCACCCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKSHGCS*ICHPVG Trigger: ACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGA...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | AGACCAAGCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCAGCAGCATATGTCGGTaGGAGCCTGAAGTCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: RPSLLHLQPASTFHFLYISSICR*EPEVWS Trigger: CGACCAGACTTCAGGCTCCCACCGACATATGCTGCT...GATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGGGCCTGTTTACGTACTaGACGTCAGGGATCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKGLFTY*TSGILS Trigger: GCTCAGGATCCCTGACGTCCAGTACGTAAACAGGCC...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGCTTCAATACCAACGTTaGACGCCAGCAGCAGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKLQYQR*TPAAGR Trigger: TCGACCTGCTGCTGGCGTTCAACGTTGGTATTGAAG...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GTTTCTGGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCCCAGAAGGGTGGGTaGCAGGGTGCCATGTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VSGLSTLLSSLLGRWSRKPQKGG*QGAMCH Trigger: ATGACACATGGCACCCTGCCACCCACCCTTCTGGGG...TTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | AGACCAAGCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTATGGAACACTTCTGTaGCTGTCCCCAGGAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RPSLLHLQPASTFHFLYIYGTLL*LSPGSQ Trigger: TTGGCTTCCTGGGGACAGGCACAGAAGTGTTCCATA...GATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | GTTTCTGGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACGCTATGGGTGCCCCTaGGTGGGAAACAGCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: VSGLSTLLSSLLGRWSRKRYGCP*VGNSNS Trigger: GCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCG...TTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGACATACTGGAAAGAATaGCGGGCTTCATGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKTYWKE*RASCSE Trigger: CTCAGAGCATGAAGCCCGTCATTCTTTCCAGTATGT...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATGGCTGCAGCTGCATCTaGCACCCAGTGGGTAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYGCSCI*HPVGSQ Trigger: CTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCC...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGACCACAGAGGGAGGGTaGAATCTCTTTGGTATGTCT | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKTTEGG*NLFGMS Trigger: AGACATACCAAAGAGATTCCACCCTCCCTCTGTGGT...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCACTTTCAAGCCGTaGATCATACCAGCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKFTFKP*IIPAKL Trigger: GAGCTTTGCTGGTATGATTCACGGCTTGAAAGTGAA...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATCTTCCGATAGAGCTGTaGGGACAGGTAGGACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYLPIEL*GQVGQP Trigger: GGGCTGTCCTACCTGTCCTCACAGCTCTATCGGAAG...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTCTTTGGTATGTCTTTaGCTTCCTTGGAGAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ACSICSQPARSTSSTSVKSLVCL*LPWRSA Trigger: TGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGA...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | CTGAGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCGAAGGCACCGAACCCTaGCCCCAGGTCCAAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: LRTDIFLLELSNGYPHYFEGTEP*PQVQDL Trigger: CAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTTC...GAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAATCCAACAGCCAGATGTaGGAATCCAGGCTTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PASTFHFLYICEVPRVNKSNSQM*ESRLGR Trigger: CCTTCCAAGCCTGGATTCTCACATCTGGCTGTTGGA...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATAGCAACTCTCTCACCTaGGGCCTATTGACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYSNSLT*GLLTCW Trigger: CCAGCAGGTCAATAGGCCTCAGGTGAGAGAGTTGCT...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | AGACCAAGCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCCAGTGCTGGAGGTGTTaGAACTGTAGATTTTACTAT | + |
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Preference number: 4 (lower is better) Translates to: RPSLLHLQPASTFHFLYIQCWRC*NCRFYY Trigger: ATAGTAAAATCTACAGTTCCAACACCTCCAGCACTG...GATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATGAAAACTTGGGAGTCTaGGGCAGGGCTTCCGATAGA | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYENLGV*GRASDR Trigger: TCTATCGGAAGCCCTGCCTCAGACTCCCAAGTTTTC...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATTGGCTCGGAACTTGTTaGGCAGATCTTCCTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYWLGTC*ADLPGS Trigger: TGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCA...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | CTGAGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCGGCACTTTGTCAAGCTaGGCCCCAGAAACTTGGACG | + |
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Preference number: 4 (lower is better) Translates to: LRTDIFLLELSNGYPHYFGTLSS*APETWT Trigger: CGTCCAAGTTTCTGGGGCTCAGCTTGACAAAGTGCC...GAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATGACCCCAAACAGTGCTaGAGGTGTTGGAACTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYDPKQC*RCWNCR Trigger: TCTACAGTTCCAACACCTCCAGCACTGTTTGGGGTC...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTGCATCTGCCACCCAGTaGGTAGCCAGATGTGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFASATQ*VARCAG Trigger: CCCGGCACATCTGGCTACCCACTGGGTGGCAGATGC...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| 3UTR CAA 72 bp | GTCTCTGTTTCTGGACTCTCTACTTTGCTGAGCTCATaGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGT | + |
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Preference number: 4 (lower is better) Translates to: VSVSGLSTLLSS*LGRWSRKPKQC Trigger: ACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAACAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GTTTCTGGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAATCAAAATCCATGGAGTaGACAGCAACACCATTAACA | + |
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Preference number: 4 (lower is better) Translates to: VSGLSTLLSSLLGRWSRKSKSME*TATPLT Trigger: TGTTAATGGTGTTGCTGTTCACTCCATGGATTTTGA...TTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GTTTCTGGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAATCCCGTCCTTTAGAGTaGTGCTTATTTCACAGTATA | + |
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Preference number: 4 (lower is better) Translates to: VSGLSTLLSSLLGRWSRKSRPLE*CLFHSI Trigger: TATACTGTGAAATAAGCATCACTCTAAAGGACGGGA...TTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATTTTCCACCGTGTCCCTaGATAGCATCTTTGAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYFPPCP*IASLRH Trigger: ATGCCTCAAAGATGCTATGCAGGGACACGGTGGAAA...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAAGTCCTTTCAGAAGTCTaGTTAGCACAGAGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PASTFHFLYICEVPRVNKVLSEV*LAQSSL Trigger: AAGACTGCTCTGTGCTAACCAGACTTCTGAAAGGAC...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | GTTGCTAATGTGACACGTTTACAACTTTCCCCTTTTCATGTTTATTGTGTCTTCGGGTGGGTGGCAGGGTaGCATGTGTCATCAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: VANVTRLQLSPFHVYCVFGWVAG*HVSSKS Trigger: GGATTTTGATGACACATGGCACCCTGCCACCCACCC...GAAGACACAATAAACATGAAAAGGGGAAAGTTGTAAACGTGTCACATTAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTGTGCTTTCTCACGGCTaGAGCTGCATCTGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFVLSHG*SCICHP Trigger: TGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCAC...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GACTGGTTTTTATCAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGTGGGAGCCTGAAGTCTaGTCGACCCCAAACAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: DWFLSNYRQASFHIRLSLWEPEV*STPNSA Trigger: AGCACTGTTTGGGGTCGACCAGACTTCAGGCTCCCA...CAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTGATAAAAACCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | GTGGTTGCTAATGTGACACGTTTACAACTTTCCCCTTTTCATGTTTATTGTGTCACGATTCTCTCGATGTaGTCAGCAGGGAACAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VVANVTRLQLSPFHVYCVTILSM*SAGNRA Trigger: AGCCCTGTTCCCTGCTGACCACATCGAGAGAATCGT...GACACAATAAACATGAAAAGGGGAAAGTTGTAAACGTGTCACATTAGCAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAATTTGAAGCTTCATCTTaGACAGAGGGTCCTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PASTFHFLYICEVPRVNKFEASS*TEGPFR Trigger: TCTGAAAGGACCCTCTGTCCAAGATGAAGCTTCAAA...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR GCA 90 bp | GACTGGTTTTTATCAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGGTCGACCCCAAACAGTaGTGGAGGTGTTGGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: DWFLSNYRQASFHIRLSLVDPKQ*WRCWNC Trigger: ACAGTTCCAACACCTCCAGCACTGTTTGGGGTCGAC...CAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTGATAAAAACCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATTGTCTTTGGCTTCCTTaGAGAAGTGCATTAATCGTC | + |
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Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYCLWLP*RSALIV Trigger: GACGATTAATGCACTTCTCCAAGGAAGCCAAAGACA...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CCA 90 bp | CTGAGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCATCTTCCTGGCTCAGTaGTTTCCTCCAGTGACCATA | + |
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Preference number: 4 (lower is better) Translates to: LRTDIFLLELSNGYPHYFIFLAQ*FPPVTI Trigger: TATGGTCACTGGAGGAAACCACTGAGCCAGGAAGAT...GAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR TCA 90 bp | GACTGGTTTTTATCAAATTATAGACAAGCCTCTTTCCATATACGCTTGTCTCTGTCTTGCTCCTCCGAATaGTACCATCTGTCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DWFLSNYRQASFHIRLSLSCSSE*YHLSGG Trigger: ACCACCTGACAGATGGTATCATTCGGAGGAGCAAGA...CAGAGACAAGCGTATATGGAAAGAGGCTTGTCTATAATTTGATAAAAACCAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR TCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTCCAGCTTCACCTTCTTaGGCAACTCTCTCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFPASPS*ATLSPE Trigger: CTCAGGTGAGAGAGTTGCTCAAGAAGGTGAAGCTGG...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR GCA 90 bp | GTTGCTAATGTGACACGTTTACAACTTTCCCCTTTTCATGTTTATTGTGTCTTCTTAAAGGCCACATCCTaGTGGTCCAACAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: VANVTRLQLSPFHVYCVFLKATS*WSNSQM Trigger: CATCTGGCTGTTGGACCAGCAGGATGTGGCCTTTAA...GAAGACACAATAAACATGAAAAGGGGAAAGTTGTAAACGTGTCACATTAGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATTGTCATCAAAATCCATaGAGTGAACAGCAACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFAELIAGKVEQETKTMYCHQNP*SEQQHH Trigger: ATGGTGTTGCTGTTCACTCCATGGATTTTGATGACA...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTATGGGTGCCCCTGCGTaGGAAACAGCAATAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFMGAPA*ETAIAN Trigger: ATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCAT...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTTTGACCTGCTGGCTGTaGAAGGATGGGACAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFLTCWL*KDGTVM Trigger: CATCACTGTCCCATCCTTCCACAGCCAGCAGGTCAA...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| 3UTR CAA 72 bp | TCCTATGAACTGAGAACTGATATATTCTTGCTGGAGTaGTCAAATGGCTACCCACACTATTTCCCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYELRTDIFLLE*SNGYPHYFPED Trigger: ATCCTCAGGGAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAGTTCATAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR GCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTCATCCCATGCTTGGCTaGATTGCCAATATGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFHPMLG*IANMKG Trigger: CCCCTTCATATTGGCAATGCAGCCAAGCATGGGATG...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | AGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCCCTTATTGGGTGACTTTATaGAACACTTCTGTGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTDIFLLELSNGYPHYFPYWVTL*NTSVPV Trigger: GACAGGCACAGAAGTGTTCCATAAAGTCACCCAATA...AGGGAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | GTTGCTAATGTGACACGTTTACAACTTTCCCCTTTTCATGTTTATTGTGTCTTCATCTGTTTGTTTCCTTaGAGGCCCAGCATTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VANVTRLQLSPFHVYCVFICLFP*RPSIAR Trigger: TCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGAT...GAAGACACAATAAACATGAAAAGGGGAAAGTTGTAAACGTGTCACATTAGCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CCA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTCGAATGAGGACATGCTaGATAGTTTTGAAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSCVVCFFDILKVVGLVFRMRTC*IVLKLH Trigger: ATGAAGCTTCAAAACTATCCAGCATGTCCTCATTCG...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| 3UTR CAA 72 bp | CTAAGCATTTTAAAAACGAAGCATGTTCTAACAATCTaGATTCTAGCTAGCAGGAGCATTTCTTGTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSILKTKHVLTI*ILASRSISCLA Trigger: AGCCAAACAAGAAATGCTCCTGCTAGCTAGAATCAAGATTGTTAGAACATGCTTCGTTTTTAAAATGCTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | TCTCACGGCTGCAGCTGCATCTGCCACCCAGTGGGTAGCCAGATGTaGCGGGAAGCTCTTAAAGGCCACATCCTGCTGGTCCAACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHGCSCICHPVGSQM*REALKGHILLVQQP Trigger: TGGCTGTTGGACCAGCAGGATGTGGCCTTTAAGAGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | ACGTTGAACGCCAGCAGCAGGTCGAGGCCAGAAAACTTGGGAGTCTaGGGCAGGGCTTCCGATAGAGCTGTGAGGACAGGTAGGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLNASSRSRPENLGV*GRASDRAVRTGRTA Trigger: GGCTGTCCTACCTGTCCTCACAGCTCTATCGGAAGCCCTGCCTCAGACTCCCAAGTTTTCTGGCCTCGACCTGCTGCTGGCGTTCAACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | AGCGTTCGCTATGGGTGCCCCTGCGTGGGAAACAGCAATAGCCAATaGCTCGCGGCACTTTGTCAAGCTGAGCCCCAGAAACTTGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: SVRYGCPCVGNSNSQ*LAALCQAEPQKLGR Trigger: GCGTCCAAGTTTCTGGGGCTCAGCTTGACAAAGTGCCGCGAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCGAACGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | CAGGGCTCTTTCTGGTGTCACAAGGTGCTTTCTCACGGCTGCAGCTaGATCTGCCACCCAGTGGGTAGCCAGATGTGCCGGGAAGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGSFWCHKVLSHGCS*ICHPVGSQMCREAL Trigger: AAGAGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGAGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | AGGGAACAGGGCTCTTTCTGGTGTCACAAGGTGCTTTCTCACGGCTaGAGCTGCATCTGCCACCCAGTGGGTAGCCAGATGTGCCGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: REQGSFWCHKVLSHG*SCICHPVGSQMCRE Trigger: TTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGAGCCCTGTTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | GTCACAAGGTGCTTTCTCACGGCTGCAGCTGCATCTGCCACCCAGTaGGTAGCCAGATGTGCCGGGAAGCTCTTAAAGGCCACATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTRCFLTAAAASATQ*VARCAGKLLKATSC Trigger: GCAGGATGTGGCCTTTAAGAGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | GCCAATATGAAGGGGCTTAGTCTGAGTGGCAGCGTTCGCTATGGGTaGCCCTGCGTGGGAAACAGCAATAGCCAATGCCTCGCGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ANMKGLSLSGSVRYG*PCVGNSNSQCLAAL Trigger: AAGTGCCGCGAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCGAACGCTGCCACTCAGACTAAGCCCCTTCATATTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | GGCCACATCCTGCTGGTCCAACAGCCAGATGTGAGAATCCAGGCTTaGAAGGTCTTCGGGGGAGTAGTTGGCATAGAAGGCACCGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: GHILLVQQPDVRIQA*KVFGGVVGIEGTEP Trigger: GGGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACATCTGGCTGTTGGACCAGCAGGATGTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | CAACTCTCTCACCTGAGGCCTATTGACCTGCTGGCTGTGGAAGGATaGGACAGTGATGCTACCGTCGAGCAGCGAGGCACAGGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: QLSHLRPIDLLAVEG*DSDATVEQRGTGHI Trigger: TATGTGGCCTGTGCCTCGCTGCTCGACGGTAGCATCACTGTCCCATCCTTCCACAGCCAGCAGGTCAATAGGCCTCAGGTGAGAGAGTTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | CTGAGTCCGGGAAGGGCCTGTTTACGTACTGGACGTCAGGGATCCTaGGCACGATTCTCTCGATGTGGTCAGCAGGGAACAGGGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSPGRACLRTGRQGS*ARFSRCGQQGTGLF Trigger: AAAGAGCCCTGTTCCCTGCTGACCACATCGAGAGAATCGTGCTCAGGATCCCTGACGTCCAGTACGTAAACAGGCCCTTCCCGGACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | CGAGGCACAGGCCACATACTGGAAAGAATGACGGGCTTCATGCTCTaGGTCCGGGAAGGGCCTGTTTACGTACTGGACGTCAGGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGTGHILERMTGFML*VREGPVYVLDVRDP Trigger: AGGATCCCTGACGTCCAGTACGTAAACAGGCCCTTCCCGGACTCAGAGCATGAAGCCCGTCATTCTTTCCAGTATGTGGCCTGTGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | ATGCTACCGTCGAGCAGCGAGGCACAGGCCACATACTGGAAAGAATaGCGGGCTTCATGCTCTGAGTCCGGGAAGGGCCTGTTTACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MLPSSSEAQATYWKE*RASCSESGKGLFTY Trigger: GTACGTAAACAGGCCCTTCCCGGACTCAGAGCATGAAGCCCGTCATTCTTTCCAGTATGTGGCCTGTGCCTCGCTGCTCGACGGTAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | ATGAAGGGGCTTAGTCTGAGTGGCAGCGTTCGCTATGGGTGCCCCTaGGTGGGAAACAGCAATAGCCAATGCCTCGCGGCACTTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: MKGLSLSGSVRYGCP*VGNSNSQCLAALCQ Trigger: TTGACAAAGTGCCGCGAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCGAACGCTGCCACTCAGACTAAGCCCCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | GAGGCCCAGCATTGCCAGAAACGTGGCTTCCATCCCATGCTTGGCTaGATTGCCAATATGAAGGGGCTTAGTCTGAGTGGCAGCGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: EAQHCQKRGFHPMLG*IANMKGLSLSGSVR Trigger: GCGAACGCTGCCACTCAGACTAAGCCCCTTCATATTGGCAATGCAGCCAAGCATGGGATGGAAGCCACGTTTCTGGCAATGCTGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | TCTTTCTGGTGTCACAAGGTGCTTTCTCACGGCTGCAGCTGCATCTaGCACCCAGTGGGTAGCCAGATGTGCCGGGAAGCTCTTAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFWCHKVLSHGCSCI*HPVGSQMCREALKG Trigger: GCCTTTAAGAGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | GAGCACGATTCTCTCGATGTGGTCAGCAGGGAACAGGGCTCTTTCTaGTGTCACAAGGTGCTTTCTCACGGCTGCAGCTGCATCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EHDSLDVVSREQGSF*CHKVLSHGCSCICH Trigger: GTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGAGCCCTGTTCCCTGCTGACCACATCGAGAGAATCGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | TGGAAGGTCTTCGGGGGAGTAGTTGGCATAGAAGGCACCGAACCCTaGCCCCAGGTCCAAGATCTGTTTGTTTCCTTGGAGGCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WKVFGGVVGIEGTEP*PQVQDLFVSLEAQH Trigger: ATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | AAGGCACCGAACCCTGACCCCAGGTCCAAGATCTGTTTGTTTCCTTaGAGGCCCAGCATTGCCAGAAACGTGGCTTCCATCCCATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAPNPDPRSKICLFP*RPSIARNVASIPCL Trigger: CAAGCATGGGATGGAAGCCACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | GCCAGATGTGAGAATCCAGGCTTGGAAGGTCTTCGGGGGAGTAGTTaGCATAGAAGGCACCGAACCCTGACCCCAGGTCCAAGATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARCENPGLEGLRGSS*HRRHRTLTPGPRSV Trigger: AACAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACATCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | AGACCAAGCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAGAATCCAGGCTaGGAAGGTCTTCGGGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RPSLLHLQPASTFHFLYICENPG*EGLRGS Trigger: ACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACA...GATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGCTTGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | TCAGGAGGATGCTCCAGCTTCACCTTCTTGAGCAACTCTCTCACCTaGGGCCTATTGACCTGCTGGCTGTGGAAGGATGGGACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SGGCSSFTFLSNSLT*GLLTCWLWKDGTVM Trigger: CATCACTGTCCCATCCTTCCACAGCCAGCAGGTCAATAGGCCTCAGGTGAGAGAGTTGCTCAAGAAGGTGAAGCTGGAGCATCCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTCCATCTGCAGCCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGAGGTCCAAGATCTGTTaGTTTCCTTGGAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACSICSQPARSTSSTSVKRSKIC*FPWRPS Trigger: GCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCT...CTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGGCTGCAGATGGAGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | CCGTGTCCCTGCATAGCATCTTTGAGGCATTGGCTCGGAACTTGTTaGGCAGATCTTCCTGGCTCAGTGGTTTCCTCCAGTGACCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PCPCIASLRHWLGTC*ADLPGSVVSSSDHR Trigger: TCTATGGTCACTGGAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCAATGCCTCAAAGATGCTATGCAGGGACACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAATCGAAGCTTGGCGGGTaGTCAGGAGGATGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PASTFHFLYICEVPRVNKSKLGG*SGGCSS Trigger: GCTGGAGCATCCTCCTGACAACCCGCCAAGCTTCGA...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | CCTTGGAGAAGTGCATTAATCGTCCCTGTACTTCAATACCAACGTTaGACGCCAGCAGCAGGTCGAGGCCAGAAAACTTGGGAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWRSALIVPVLQYQR*TPAAGRGQKTWESE Trigger: CTCAGACTCCCAAGTTTTCTGGCCTCGACCTGCTGCTGGCGTTCAACGTTGGTATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | CATGGAGTGAACAGCAACACCATTAACAAAAGCAGCATATGTCGGTaGGAGCCTGAAGTCTGGTCGACCCCAAACAGTGCTGGAGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVNSNTINKSSICR*EPEVWSTPNSAGGV Trigger: AACACCTCCAGCACTGTTTGGGGTCGACCAGACTTCAGGCTCCCACCGACATATGCTGCTTTTGTTAATGGTGTTGCTGTTCACTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAACTGAGCCCCAGAAACTaGGACGCAGCAGCAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PASTFHFLYICEVPRVNKLSPRN*DAAAAL Trigger: AAGTGCTGCTGCTGCGTCCAAGTTTCTGGGGCTCAG...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | AGCCAACGCCCAGAGAATCCAGGATCATCCTCTTGCTCCTCCGAATaGTACCATCTGTCAGGTGGTTCACTTTCAAGCCGTGAATCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SQRPENPGSSSCSSE*YHLSGGSLSSRESY Trigger: GTATGATTCACGGCTTGAAAGTGAACCACCTGACAGATGGTATCATTCGGAGGAGCAAGAGGATGATCCTGGATTCTCTGGGCGTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGCACGTTCCACTTCCTCTACATCTGTGAAGTTCCCAGAGTTAATAAACCCTGCATAGCATCTTaGAGGCATTGGCTCGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PASTFHFLYICEVPRVNKPCIAS*RHWLGT Trigger: AGTTCCGAGCCAATGCCTCAAAGATGCTATGCAGGG...TTTATTAACTCTGGGAACTTCACAGATGTAGAGGAAGTGGAACGTGCTGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS GCA 90 bp | GGAGGGTGGAATCTCTTTGGTATGTCTTTGGCTTCCTTGGAGAAGTaGATTAATCGTCCCTGTACTTCAATACCAACGTTGAACGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGWNLFGMSLASLEK*INRPCTSIPTLNAS Trigger: GCTGGCGTTCAACGTTGGTATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 90 bp | AACACCATTAACAAAAGCAGCATATGTCGGTGGGAGCCTGAAGTCTaGTCGACCCCAAACAGTGCTGGAGGTGTTGGAACTGTAGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTINKSSICRWEPEV*STPNSAGGVGTVDF Trigger: AAAATCTACAGTTCCAACACCTCCAGCACTGTTTGGGGTCGACCAGACTTCAGGCTCCCACCGACATATGCTGCTTTTGTTAATGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS TCA 90 bp | AAACAGTGCTGGAGGTGTTGGAACTGTAGATTTTACTATATTGGGTaGCTTTATGGAACACTTCTGTGCCTGTCCCCAGGAAGCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: KQCWRCWNCRFYYIG*LYGTLLCLSPGSQR Trigger: GCGTTGGCTTCCTGGGGACAGGCACAGAAGTGTTCCATAAAGTCACCCAATATAGTAAAATCTACAGTTCCAACACCTCCAGCACTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGGACTCTCTACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAAATGTCTTTGGCTTCCTaGGAGAAGTGCATTAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSGLSTLLSSLLGRWSRKMSLAS*EKCINR Trigger: ACGATTAATGCACTTCTCCAAGGAAGCCAAAGACAT...TTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTAGAGAGTCCAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | TACTTTGCTGAGCTCATTGCTGGGAAGGTGGAGCAGGAAACCAAAACAATGTATCTCTTTGGTATGTCTTaGGCTTCCTTGGAGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YFAELIAGKVEQETKTMYLFGMS*ASLEKC Trigger: GCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAG...ATACATTGTTTTGGTTTCCTGCTCCACCTTCCCAGCAATGAGCTCAGCAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS-3UTR CAA 90 bp | GTTGCTAATGTGACACGTTTACAACTTTCCCCTTTTCATGTTTATTGTGTCTTCACTTCAATACCAACGTaGAACGCCAGCAGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VANVTRLQLSPFHVYCVFTSIPT*NASSRS Trigger: CGACCTGCTGCTGGCGTTCAACGTTGGTATTGAAGT...GAAGACACAATAAACATGAAAAGGGGAAAGTTGTAAACGTGTCACATTAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CAA 90 bp | CTGAGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCGAGGGTGGAATCTCTTaGGTATGTCTTTGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRTDIFLLELSNGYPHYFEGGIS*VCLWLP Trigger: AGGAAGCCAAAGACATACCAAAGAGATTCCACCCTC...GAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 90 bp | ATAGTTTTGAAGCTTCATCTTGGACAGAGGGTCCTTTCAGAAGTCTaGTTAGCACAGAGCAGTCTTCTAGGTCTTCTAGCTTTTCTACTA | + |
|
Preference number: 5 (lower is better) Translates to: IVLKLHLGQRVLSEV*LAQSSLLGLLAFLL Trigger: TAGTAGAAAAGCTAGAAGACCTAGAAGACTGCTCTGTGCTAACCAGACTTCTGAAAGGACCCTCTGTCCAAGATGAAGCTTCAAAACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CAA 90 bp | AGATCCTGTGTTGTTTGTTTCTTTGATATCTTGAAGGTAGTAGGACTGGTTTTTGATCTGTTTGTTTCCTaGGAGGCCCAGCATTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSCVVCFFDILKVVGLVFDLFVS*EAQHCQ Trigger: CTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATC...AAAAACCAGTCCTACTACCTTCAAGATATCAAAGAAACAAACAACACAGGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS-3UTR CAA 90 bp | AGAACTGATATATTCTTGCTGGAGTTGTCAAATGGCTACCCACACTATTTCCCTACATGCTGGATAGTTTaGAAGCTTCATCTTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: RTDIFLLELSNGYPHYFPTCWIV*KLHLGQ Trigger: CTGTCCAAGATGAAGCTTCAAAACTATCCAGCATGT...AGGGAAATAGTGTGGGTAGCCATTTGACAACTCCAGCAAGAATATATCAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | GCCAGCAGCAGGTCGAGGCCAGAAAACTTGGGAGTCTaGGGCAGGGCTTCCGATAGAGCTGTGAGGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSRSRPENLGV*GRASDRAVRTG Trigger: ACCTGTCCTCACAGCTCTATCGGAAGCCCTGCCTCAGACTCCCAAGTTTTCTGGCCTCGACCTGCTGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | TCGAGCAGCGAGGCACAGGCCACATACTGGAAAGAATaGCGGGCTTCATGCTCTGAGTCCGGGAAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSEAQATYWKE*RASCSESGKGL Trigger: CAGGCCCTTCCCGGACTCAGAGCATGAAGCCCGTCATTCTTTCCAGTATGTGGCCTGTGCCTCGCTGCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | CTTAGTCTGAGTGGCAGCGTTCGCTATGGGTGCCCCTaGGTGGGAAACAGCAATAGCCAATGCCTCGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLSGSVRYGCP*VGNSNSQCLAA Trigger: TGCCGCGAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCGAACGCTGCCACTCAGACTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TGCAGCTGCATCTGCCACCCAGTGGGTAGCCAGATGTaGCGGGAAGCTCTTAAAGGCCACATCCTGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSCICHPVGSQM*REALKGHILLV Trigger: GACCAGCAGGATGTGGCCTTTAAGAGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TGTCACAAGGTGCTTTCTCACGGCTGCAGCTGCATCTaGCACCCAGTGGGTAGCCAGATGTGCCGGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CHKVLSHGCSCI*HPVGSQMCREA Trigger: AGCTTCCCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TTCTGGTGTCACAAGGTGCTTTCTCACGGCTGCAGCTaGATCTGCCACCCAGTGGGTAGCCAGATGTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: FWCHKVLSHGCS*ICHPVGSQMCR Trigger: CCGGCACATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | CACCTGAGGCCTATTGACCTGCTGGCTGTGGAAGGATaGGACAGTGATGCTACCGTCGAGCAGCGAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLRPIDLLAVEG*DSDATVEQRGT Trigger: TGTGCCTCGCTGCTCGACGGTAGCATCACTGTCCCATCCTTCCACAGCCAGCAGGTCAATAGGCCTCAGGTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | ATAGCCAATGCCTCGCGGCACTTTGTCAAGCTGAGCCCCAGAAACTaGGACGCAGCAGCAGCACTTCCCAGAGTCCCCACCACAGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IANASRHFVKLSPRN*DAAAALPRVPTTEG Trigger: TCCCTCTGTGGTGGGGACTCTGGGAAGTGCTGCTGCTGCGTCCAAGTTTCTGGGGCTCAGCTTGACAAAGTGCCGCGAGGCATTGGCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | AAGGGGCTTAGTCTGAGTGGCAGCGTTCGCTATGGGTaGCCCTGCGTGGGAAACAGCAATAGCCAATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KGLSLSGSVRYG*PCVGNSNSQCL Trigger: GAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATAGCGAACGCTGCCACTCAGACTAAGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | GGCTCTTTCTGGTGTCACAAGGTGCTTTCTCACGGCTaGAGCTGCATCTGCCACCCAGTGGGTAGCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSFWCHKVLSHG*SCICHPVGSQM Trigger: CATCTGGCTACCCACTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TCAGCAGGGAACAGGGCTCTTTCTGGTGTCACAAGGTaGTTTCTCACGGCTGCAGCTGCATCTGCCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGNRALSGVTR*FLTAAAASATQ Trigger: CTGGGTGGCAGATGCAGCTGCAGCCGTGAGAAAGCACCTTGTGACACCAGAAAGAGCCCTGTTCCCTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | GAGAATCCAGGCTTGGAAGGTCTTCGGGGGAGTAGTTaGCATAGAAGGCACCGAACCCTGACCCCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ENPGLEGLRGSS*HRRHRTLTPGP Trigger: TGGACCTGGGGTCAGGGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | AGGCCACATCCTGCTGGTCCAACAGCCAGATGTGAGAATCCAGGCTaGGAAGGTCTTCGGGGGAGTAGTTGGCATAGAAGGCACCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RPHPAGPTARCENPG*EGLRGSSWHRRHRT Trigger: GGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACATCTGGCTGTTGGACCAGCAGGATGTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TATGGGTGCCCCTGCGTGGGAAACAGCAATAGCCAATaGCTCGCGGCACTTTGTCAAGCTGAGCCCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: YGCPCVGNSNSQ*LAALCQAEPQK Trigger: TTTCTGGGGCTCAGCTTGACAAAGTGCCGCGAGGCATTGGCTATTGCTGTTTCCCACGCAGGGGCACCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AGAGCTGTGAGGACAGGTAGGACAGCCCCAGAAGGGTaGGTGGCAGGGTGCCATGTGTCATCAAAATCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RAVRTGRTAPEG*VAGCHVSSKSM Trigger: CATGGATTTTGATGACACATGGCACCCTGCCACCCACCCTTCTGGGGCTGTCCTACCTGTCCTCACAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | GGAAGGGCCTGTTTACGTACTGGACGTCAGGGATCCTaGGCACGATTCTCTCGATGTGGTCAGCAGGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GRACLRTGRQGS*ARFSRCGQQGT Trigger: TGTTCCCTGCTGACCACATCGAGAGAATCGTGCTCAGGATCCCTGACGTCCAGTACGTAAACAGGCCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | GGCCACATACTGGAAAGAATGACGGGCTTCATGCTCTaGGTCCGGGAAGGGCCTGTTTACGTACTGGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GHILERMTGFML*VREGPVYVLDV Trigger: GACGTCCAGTACGTAAACAGGCCCTTCCCGGACTCAGAGCATGAAGCCCGTCATTCTTTCCAGTATGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | TGCTCCAGCTTCACCTTCTTGAGCAACTCTCTCACCTaGGGCCTATTGACCTGCTGGCTGTGGAAGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSSFTFLSNSLT*GLLTCWLWKDG Trigger: CCCATCCTTCCACAGCCAGCAGGTCAATAGGCCTCAGGTGAGAGAGTTGCTCAAGAAGGTGAAGCTGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | CTGCTGGTCCAACAGCCAGATGTGAGAATCCAGGCTTaGAAGGTCTTCGGGGGAGTAGTTGGCATAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVQQPDVRIQA*KVFGGVVGIEG Trigger: GCCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACATCTGGCTGTTGGACCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | TCATGCTCTGAGTCCGGGAAGGGCCTGTTTACGTACTaGACGTCAGGGATCCTGAGCACGATTCTCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SCSESGKGLFTY*TSGILSTILSM Trigger: CATCGAGAGAATCGTGCTCAGGATCCCTGACGTCCAGTACGTAAACAGGCCCTTCCCGGACTCAGAGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | GGCTCGGAACTTGTTGCGCAGATCTTCCTGGCTCAGTaGTTTCCTCCAGTGACCATAGAAGGTGTCAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSELVAQIFLAQ*FPPVTIEGVRA Trigger: CGCTCTGACACCTTCTATGGTCACTGGAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | AAGGCACCGAACCCTGACCCCAGGTCCAAGATCTGTTaGTTTCCTTGGAGGCCCAGCATTGCCAGAAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAPNPDPRSKIC*FPWRPSIARNV Trigger: CACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | CCTGCTGGTCCAACAGCCAGATGTGAGAATCCAGGCTaGGAAGGTCTTCGGGGGAGTAGTTGGCATAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGPTARCENPG*EGLRGSSWHRR Trigger: CCTTCTATGCCAACTACTCCCCCGAAGACCTTCCAAGCCTGGATTCTCACATCTGGCTGTTGGACCAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | CTGACCCCAGGTCCAAGATCTGTTTGTTTCCTTGGAGGCCCAGCATaGCCAGAAACGTGGCTTCCATCCCATGCTTGGCTGCATTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LTPGPRSVCFLGGPA*PETWLPSHAWLHCQ Trigger: TTGGCAATGCAGCCAAGCATGGGATGGAAGCCACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | TTCGGGGGAGTAGTTGGCATAGAAGGCACCGAACCCTaGCCCCAGGTCCAAGATCTGTTTGTTTCCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FGGVVGIEGTEP*PQVQDLFVSLE Trigger: CTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAGGGTTCGGTGCCTTCTATGCCAACTACTCCCCCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | GTCCAAGATCTGTTTGTTTCCTTGGAGGCCCAGCATTaGCAGAAACGTGGCTTCCATCCCATGCTTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQDLFVSLEAQH*QKRGFHPMLGC Trigger: GCAGCCAAGCATGGGATGGAAGCCACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TATAGCGTGTCGAAGCTTGGCGGGTTGTCAGGAGGATaGTCCAGCTTCACCTTCTTGAGCAACTCTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: YSVSKLGGLSGG*SSFTFLSNSLT Trigger: GGTGAGAGAGTTGCTCAAGAAGGTGAAGCTGGAGCATCCTCCTGACAACCCGCCAAGCTTCGACACGCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AACCCTGACCCCAGGTCCAAGATCTGTTTGTTTCCTTaGAGGCCCAGCATTGCCAGAAACGTGGCTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: NPDPRSKICLFP*RPSIARNVASI Trigger: GATGGAAGCCACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACCTGGGGTCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | GGTCCAAGATCTGTTTGTTTCCTTGGAGGCCCAGCATaGCCAGAAACGTGGCTTCCATCCCATGCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPRSVCFLGGPA*PETWLPSHAWL Trigger: CAGCCAAGCATGGGATGGAAGCCACGTTTCTGGCAATGCTGGGCCTCCAAGGAAACAAACAGATCTTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | CCTGTCCCCAGGAAGCCAACGCCCAGAGAATCCAGGATCATCCTCTaGCTCCTCCGAATGATACCATCTGTCAGGTGGTTCACTTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPRKPTPRESRIIL*LLRMIPSVRWFTFK Trigger: CTTGAAAGTGAACCACCTGACAGATGGTATCATTCGGAGGAGCAAGAGGATGATCCTGGATTCTCTGGGCGTTGGCTTCCTGGGGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | CATTGCCAGAAACGTGGCTTCCATCCCATGCTTGGCTaGATTGCCAATATGAAGGGGCTTAGTCTGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HCQKRGFHPMLG*IANMKGLSLSG Trigger: GCCACTCAGACTAAGCCCCTTCATATTGGCAATGCAGCCAAGCATGGGATGGAAGCCACGTTTCTGGCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AACAAAAGCAGCATATGTCGGTGGGAGCCTGAAGTCTaGTCGACCCCAAACAGTGCTGGAGGTGTTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: NKSSICRWEPEV*STPNSAGGVGT Trigger: AGTTCCAACACCTCCAGCACTGTTTGGGGTCGACCAGACTTCAGGCTCCCACCGACATATGCTGCTTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | AGGAAGCCAACGCCCAGAGAATCCAGGATCATCCTCTaGCTCCTCCGAATGATACCATCTGTCAGGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RKPTPRESRIIL*LLRMIPSVRWF Trigger: GAACCACCTGACAGATGGTATCATTCGGAGGAGCAAGAGGATGATCCTGGATTCTCTGGGCGTTGGCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | CTGCATAGCATCTTTGAGGCATTGGCTCGGAACTTGTaGCGCAGATCTTCCTGGCTCAGTGGTTTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSIFEALARNL*RRSSWLSGFLQ Trigger: CTGGAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCAATGCCTCAAAGATGCTATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | TCCCTGCATAGCATCTTTGAGGCATTGGCTCGGAACTaGTTGCGCAGATCTTCCTGGCTCAGTGGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLHSIFEALARN*LRRSSWLSGFL Trigger: GAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCAATGCCTCAAAGATGCTATGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | GTTATAAGGCTTTCCACCGTGTCCCTGCATAGCATCTTTGAGGCATaGGCTCGGAACTTGTTGCGCAGATCTTCCTGGCTCAGTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VIRLSTVSLHSIFEA*ARNLLRRSSWLSGF Trigger: GAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCAATGCCTCAAAGATGCTATGCAGGGACACGGTGGAAAGCCTTATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | TGCATAGCATCTTTGAGGCATTGGCTCGGAACTTGTTaGGCAGATCTTCCTGGCTCAGTGGTTTCCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CIASLRHWLGTC*ADLPGSVVSSS Trigger: ACTGGAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCAATGCCTCAAAGATGCTATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | CCAGAGTCCCCACCACAGAGGGAGGGTGGAATCTCTTaGGTATGTCTTTGGCTTCCTTGGAGAAGTGCATTA | + |
|
Preference number: 6 (lower is better) Translates to: PESPPQREGGIS*VCLWLPWRSAL Trigger: TAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTCCCTCTGTGGTGGGGACTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | AGAGTGATGCTTATTTCACAGTATAGCGTGTCGAAGCTTGGCGGGTaGTCAGGAGGATGCTCCAGCTTCACCTTCTTGAGCAACTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVMLISQYSVSKLGG*SGGCSSFTFLSNSL Trigger: GAGAGAGTTGCTCAAGAAGGTGAAGCTGGAGCATCCTCCTGACAACCCGCCAAGCTTCGACACGCTATACTGTGAAATAAGCATCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | CCAGAGAATCCAGGATCATCCTCTTGCTCCTCCGAATaGTACCATCTGTCAGGTGGTTCACTTTCAAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PENPGSSSCSSE*YHLSGGSLSSR Trigger: ACGGCTTGAAAGTGAACCACCTGACAGATGGTATCATTCGGAGGAGCAAGAGGATGATCCTGGATTCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | AGTGCATTAATCGTCCCTGTACTTCAATACCAACGTTaGACGCCAGCAGCAGGTCGAGGCCAGAAAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SALIVPVLQYQR*TPAAGRGQKTW Trigger: CCAAGTTTTCTGGCCTCGACCTGCTGCTGGCGTTCAACGTTGGTATTGAAGTACAGGGACGATTAATGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AACAGCAACACCATTAACAAAAGCAGCATATGTCGGTaGGAGCCTGAAGTCTGGTCGACCCCAAACAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NSNTINKSSICR*EPEVWSTPNSA Trigger: AGCACTGTTTGGGGTCGACCAGACTTCAGGCTCCCACCGACATATGCTGCTTTTGTTAATGGTGTTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CCA 72 bp | CCACAGAGGGAGGGTGGAATCTCTTTGGTATGTCTTTaGCTTCCTTGGAGAAGTGCATTAATCGTCCCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PQREGGISLVCL*LPWRSALIVPV Trigger: TACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTCCCTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | ACCTGGGCAACGTTGTGTGATCGAATGAGGACATGCTaGATAGTTTTGAAGCTTCATCTTGGACAGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TWATLCDRMRTC*IVLKLHLGQRV Trigger: GACCCTCTGTCCAAGATGAAGCTTCAAAACTATCCAGCATGTCCTCATTCGATCACACAACGTTGCCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | AAGTGCATTAATCGTCCCTGTACTTCAATACCAACGTaGAACGCCAGCAGCAGGTCGAGGCCAGAAAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KCINRPCTSIPT*NASSRSRPENL Trigger: CAAGTTTTCTGGCCTCGACCTGCTGCTGGCGTTCAACGTTGGTATTGAAGTACAGGGACGATTAATGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
||
| CDS CAA 90 bp | ACCACAGAGGGAGGGTGGAATCTCTTTGGTATGTCTTTGGCTTCCTaGGAGAAGTGCATTAATCGTCCCTGTACTTCAATACCAACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TTEGGWNLFGMSLAS*EKCINRPCTSIPTL Trigger: CAACGTTGGTATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTCCCTCTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 90 bp | ACCTGGGCAACGTTGTGTGATCGAATGAGGACATGCTGGATAGTTTaGAAGCTTCATCTTGGACAGAGGGTCCTTTCAGAAGTCTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: TWATLCDRMRTCWIV*KLHLGQRVLSEVWL Trigger: TAACCAGACTTCTGAAAGGACCCTCTGTCCAAGATGAAGCTTCAAAACTATCCAGCATGTCCTCATTCGATCACACAACGTTGCCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AAGCTTCATCTTGGACAGAGGGTCCTTTCAGAAGTCTaGTTAGCACAGAGCAGTCTTCTAGGTCTTCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLHLGQRVLSEV*LAQSSLLGLLA Trigger: AGCTAGAAGACCTAGAAGACTGCTCTGTGCTAACCAGACTTCTGAAAGGACCCTCTGTCCAAGATGAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS TCA 72 bp | ATGATACCATCTGTCAGGTGGTTCACTTTCAAGCCGTaGATCATACCAGCAAAGCTCTCTGTGACAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: MIPSVRWFTFKP*IIPAKLSVTDL Trigger: CAAGTCTGTCACAGAGAGCTTTGCTGGTATGATTCACGGCTTGAAAGTGAACCACCTGACAGATGGTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | GAGGGTGGAATCTCTTTGGTATGTCTTTGGCTTCCTTaGAGAAGTGCATTAATCGTCCCTGTACTTCAATAC | + |
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Preference number: 6 (lower is better) Translates to: EGGISLVCLWLP*RSALIVPVLQY Trigger: GTATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CCA 72 bp | AATGAGGACATGCTGGATAGTTTTGAAGCTTCATCTTaGACAGAGGGTCCTTTCAGAAGTCTGGTTAGCACA | + |
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Preference number: 6 (lower is better) Translates to: NEDMLDSFEASS*TEGPFRSLVST Trigger: TGTGCTAACCAGACTTCTGAAAGGACCCTCTGTCCAAGATGAAGCTTCAAAACTATCCAGCATGTCCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | GGAGGGTGGAATCTCTTTGGTATGTCTTTGGCTTCCTaGGAGAAGTGCATTAATCGTCCCTGTACTTCAATA | + |
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Preference number: 6 (lower is better) Translates to: GGWNLFGMSLAS*EKCINRPCTSI Trigger: TATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATTCCACCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS CAA 72 bp | ACGTTGTGTGATCGAATGAGGACATGCTGGATAGTTTaGAAGCTTCATCTTGGACAGAGGGTCCTTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TLCDRMRTCWIV*KLHLGQRVLSE Trigger: TTCTGAAAGGACCCTCTGTCCAAGATGAAGCTTCAAAACTATCCAGCATGTCCTCATTCGATCACACAACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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| CDS GCA 72 bp | AATCTCTTTGGTATGTCTTTGGCTTCCTTGGAGAAGTaGATTAATCGTCCCTGTACTTCAATACCAACGTTG | + |
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Preference number: 6 (lower is better) Translates to: NLFGMSLASLEK*INRPCTSIPTL Trigger: CAACGTTGGTATTGAAGTACAGGGACGATTAATGCACTTCTCCAAGGAAGCCAAAGACATACCAAAGAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022722.7 |
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