Pregenerated sensors for ACO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022477Ensembl transcript IDs: ENSMUST00000023116.7, ENSMUST00000135198.2, ENSMUST00000157003.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGCTCCAACACAAGATTTTCCTCTGCTGGGACCTTCGTTTCCTaGAAGGGAAGCAGCTTTCAGCTGTCACCTCAGGCTCCCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: RSSNTRFSSAGTFVS*KGSSFQLSPQAPHS Trigger: GCTGTGGGGAGCCTGAGGTGACAGCTGAAAGCTGCTTCCCTTTCAGGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR CCA 90 bp | TCCTTGGATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTaGGACCTTCGTTTCCTGAAAGGGAAGCAGCTTTCAGCTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: SLDKGQKLQHKIFLC*DLRFLKGKQLSAVT Trigger: GGTGACAGCTGAAAGCTGCTTCCCTTTCAGGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATCCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR CCA 90 bp | GCAGGCATGGGACACTGTCCCTGTTCTCTTCTTAATGTTACTCCTTaGATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: AGMGHCPCSLLNVTP*IRDRSSNTRFSSAG Trigger: CCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATCCAAGGAGTAACATTAAGAAGAGAACAGGGACAGTGTCCCATGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGAGCAGGAGGTCATGCTaGACAGACCAGATTAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TVAWAAQRETKLNRKAGLSRRSC*TDQIRL Trigger: GAGCCTAATCTGGTCTGTGCAGCATGACCTCCTGCT...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| 3UTR-3UTR TCA 90 bp | GGCATGGGACACTGTCCCTGTTCTCTTCTTAATGTTACTCCTTGGATAAGGGACGGGACCTTCGTTTCCTaGAAGGGAAGCAGCTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GMGHCPCSLLNVTPWIRDGTFVS*KGSSFQ Trigger: CTGAAAGCTGCTTCCCTTTCAGGAAACGAAGGTCCC...GTCCCTTATCCAAGGAGTAACATTAAGAAGAGAACAGGGACAGTGTCCCATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR CCA 72 bp | GCGGGGCTGGAACATTATCTTAAACGCCCTCAATGGTaGTTCACTGGGCTGAGGCTAGGCAGGAAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: AGLEHYLKRPQW*FTGLRLGRKQV Trigger: GACCTGCTTCCTGCCTAGCCTCAGCCCAGTGAACCACCATTGAGGGCGTTTAAGATAATGTTCCAGCCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| 3UTR CCA 72 bp | AAGGCGGGGCTGGAACATTATCTTAAACGCCCTCAATaGTGGTTCACTGGGCTGAGGCTAGGCAGGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KAGLEHYLKRPQ*WFTGLRLGRKQ Trigger: CTGCTTCCTGCCTAGCCTCAGCCCAGTGAACCACCATTGAGGGCGTTTAAGATAATGTTCCAGCCCCGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| 3UTR CCA 72 bp | GCCTCCTCCACCTCTCAAGTGCTAGGACTGCAGGCATaGGACACTGTCCCTGTTCTCTTCTTAATGTTACTC | + |
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Preference number: 3 (lower is better) Translates to: ASSTSQVLGLQA*DTVPVLFLMLL Trigger: GAGTAACATTAAGAAGAGAACAGGGACAGTGTCCCATGCCTGCAGTCCTAGCACTTGAGAGGTGGAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR TCA 72 bp | AACACAAGATTTTCCTCTGCTGGGACCTTCGTTTCCTaGAAGGGAAGCAGCTTTCAGCTGTCACCTCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: NTRFSSAGTFVS*KGSSFQLSPQA Trigger: AGCCTGAGGTGACAGCTGAAAGCTGCTTCCCTTTCAGGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR GCA 72 bp | GATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTaGTGGGACCTTCGTTTCCTGAAAGGGAAGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: DKGQKLQHKIFL*WDLRFLKGKQL Trigger: AAGCTGCTTCCCTTTCAGGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| 3UTR CCA 72 bp | AAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTaGGACCTTCGTTTCCTGAAAGGGAAGCAGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: KGQKLQHKIFLC*DLRFLKGKQLS Trigger: TGAAAGCTGCTTCCCTTTCAGGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTGCCTCCTCCACCTCTCAAGTGCTAGGACTGCAGGCATGGGACACTGTCCCTTCTGCAGCCGGGTaGCCAGGAGGCTGTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: APASSTSQVLGLQAWDTVPSAAG*PGGCKA Trigger: CGCCTTACAGCCTCCTGGTCACCCGGCTGCAGAAGG...GACAGTGTCCCATGCCTGCAGTCCTAGCACTTGAGAGGTGGAGGAGGCAGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| CDS-3UTR TCA 90 bp | TGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCGCTCCTTCATCCTGTTaGGGGCACTGCCTGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: WAEARQEAGLVTILEQEVAPSSC*GHCLHG Trigger: TCCGTGCAGGCAGTGCCCTCAACAGGATGAAGGAGC...GACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAACACCCAGGGCCTTCTaGAGCCGGGTGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPTPRAF*SRVTRR Trigger: CCTCCTGGTCACCCGGCTGCAGAAGGCCCTGGGTGT...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | TGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCCACCCCCTACTCCAATaGAGATGCCTCCCAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: WAEARQEAGLVTILEQEVHPLLQ*RCLPGH Trigger: GTGGCCTGGGAGGCATCTGCATTGGAGTAGGGGGTG...GACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCACTGTGGCATCCTGCATaGCCACCCGGTCGGGCCGTA | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPLWHPA*PPGRAV Trigger: TACGGCCCGACCGGGTGGCCATGCAGGATGCCACAG...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCACACAGTCCCCACATCTaGCACTGGGTGAGCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPHSPHI*HWVSQV Trigger: GACTTGGCTCACCCAGTGGCAGATGTGGGGACTGTG...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAACCAGGCCACCACCATTaGGGGTGTGCGAATCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: VAWAAQRETKLNRKAGLEPGHHH*GCANQC Trigger: GCACTGATTCGCACACCCCCAATGGTGGTGGCCTGG...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | GCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACACCTTCTGCAGCCGGGTaGCCAGGAGGCTGTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: AQTRLGSDDAHGPVTKVTPSAAG*PGGCKA Trigger: CGCCTTACAGCCTCCTGGTCACCCGGCTGCAGAAGG...TGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGATCACAGTGGATGGTTaGTGGTACAGCCACCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: HWAEARQEAGLVTILEQEITVDG*WYSHLR Trigger: CCTAAGGTGGCTGTACCATCAACCATCCACTGTGAT...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGTGCATGCTCCCGGCTTaGGCCCTCACCATAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLCMLPA*ALTIVL Trigger: GAGAACTATGGTGAGGGCTCAAGCCGGGAGCATGCA...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGTGCTGGTATGTGTCCTaGCCTGGATCAAAGTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: HWAEARQEAGLVTILEQECWYVS*PGSKSD Trigger: ATCGGACTTTGATCCAGGGCAGGACACATACCAGCA...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGTCTAGAATGATCTGGTaGATGATCCCAGATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HWAEARQEAGLVTILEQESRMIW*MIPDPG Trigger: GCCTGGATCTGGGATCATTCACCAGATCATTCTAGA...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGCTGGAGCCTCCAACTTaGACTTCTTGCCGTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLLEPPT*TSCRPC Trigger: GCAAGGACGGCAAGAAGTTCAAGTTGGAGGCTCCAG...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAGGCCAAACTCCTGGGTaGCAGCATTGCGTACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: VAWAAQRETKLNRKAGLEGQTPG*QHCVQS Trigger: ACTCTGTACGCAATGCTGTCACCCAGGAGTTTGGCC...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | TGTTACTCCTTGGATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTGGACACCCAGGGCCTTCTaGAGCCGGGTGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CYSLDKGQKLQHKIFLCWTPRAF*SRVTRR Trigger: CCTCCTGGTCACCCGGCTGCAGAAGGCCCTGGGTGT...CCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATCCAAGGAGTAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| CDS-3UTR GCA 90 bp | AGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATCCAGCAGGGGCTCCAGTGCTGCATaGTCCCGGCTTGAGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLGSDDAHGPVTKVTSSRGSSAA*SRLEPS Trigger: TGAGGGCTCAAGCCGGGAGCATGCAGCACTGGAGCC...CCTGCTGGATGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGTCACTGGGCTCAAAATaGCTCATGGCCACCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLSLGSK*LMATLA Trigger: GGCCAAGGTGGCCATGAGCCATTTTGAGCCCAGTGA...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGATCGGATGTACTCACTaGGCTCAAAATGGCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: HWAEARQEAGLVTILEQEIGCTH*AQNGSW Trigger: CCATGAGCCATTTTGAGCCCAGTGAGTACATCCGAT...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGCACTAAGTGATCCTTaGATTCTTCTGCTAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HWAEARQEAGLVTILEQEALSDP*ILLLGW Trigger: CCAACCTAGCAGAAGAATTCAAGGATCACTTAGTGC...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAAGGGGCAGCAAGCCCTaGTTCTTTAGATTGGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPRGSKP*FFRLVS Trigger: CGAAACCAATCTAAAGAAGCAGGGCTTGCTGCCCCT...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGATGTAGCATAGCCATCTaGGCTGTGGCATCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SCMGCSKRNQTEQEGGAGCSIAI*AVASCM Trigger: CATGCAGGATGCCACAGCCCAGATGGCTATGCTACA...TCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | GCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGATTCTTCTGCTAGGTTaGCAATGTCTGTTCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AEARQEAGLVTILEQEVMILLLG*QCLFGL Trigger: CAGGCCGAACAGACATTGCCAACCTAGCAGAAGAAT...CATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | AGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAAGGGCCACAGGCATTaGCCAAAACGATTCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SCMGCSKRNQTEQEGGAGKGHRH*PKRFHP Trigger: TGGGTGGAATCGTTTTGGCCAATGCCTGTGGCCCTT...TCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAATGGGTCTCAGGGTTTaGATCATTACGGCCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPMGLRV*IITACE Trigger: TTCACAGGCCGTAATGATGCAAACCCTGAGACCCAT...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAGAGATGTTATCCAGATaGCCACGGAACTTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: VAWAAQRETKLNRKAGLEEMLSR*PRNLSQ Trigger: CTGGCTCAAGTTCCGTGGGCATCTGGATAACATCTC...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCACCTGCTTCTTTAGATTaGTTTCGTGGATCCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPPASLD*FRGSWR Trigger: TCGCCAGGATCCACGAAACCAATCTAAAGAAGCAGG...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | AGGCTTCACCAGTCAACAGACTTAGAACTTTATTTAGAAGGTAGTTCTCTGCTGCCTTCTGCAGCCGGGTaGCCAGGAGGCTGTAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RLHQSTDLELYLEGSSLLPSAAG*PGGCKA Trigger: CGCCTTACAGCCTCCTGGTCACCCGGCTGCAGAAGG...CAGCAGAGAACTACCTTCTAAATAAAGTTCTAAGTCTGTTGACTGGTGAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135198.2 ENSMUST00000157003.8 |
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| CDS-3UTR GCA 90 bp | AGGCTTCACCAGTCAACAGACTTAGAACTTTATTTAGAAGGTAGTTCTCTGCTGACACCCAGGGCCTTCTaGAGCCGGGTGACCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RLHQSTDLELYLEGSSLLTPRAF*SRVTRR Trigger: CCTCCTGGTCACCCGGCTGCAGAAGGCCCTGGGTGT...CAGCAGAGAACTACCTTCTAAATAAAGTTCTAAGTCTGTTGACTGGTGAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135198.2 ENSMUST00000157003.8 |
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| CDS-3UTR GCA 90 bp | CATGCTGCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAATCGGGGAAGCTCGTCTaGATCTGGAGCCTCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: HAAQTRLGSDDAHGPVTKSGKLV*IWSLQL Trigger: AAGTTGGAGGCTCCAGATGCAGACGAGCTTCCCCGA...TTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGCAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | GTTACTCCTTGGATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTGGGTCACTGGGCTCAAAATaGCTCATGGCCACCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VTPWIRDRSSNTRFSSAGSLGSK*LMATLA Trigger: GGCCAAGGTGGCCATGAGCCATTTTGAGCCCAGTGA...CCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATCCAAGGAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| CDS-3UTR CCA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAAAGCTCGTCTGCATCTaGAGCCTCCAACTTGAACTT | + |
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Preference number: 4 (lower is better) Translates to: VAWAAQRETKLNRKAGLEKLVCI*SLQLEL Trigger: AAGTTCAAGTTGGAGGCTCCAGATGCAGACGAGCTT...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | GCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCCATTGCGTACAGAGTTaGCTTTGCCATTTTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: AGSRSGHHLRAGGHAAQTHCVQS*LCHFRC Trigger: ACATCGAAAATGGCAAAGCCAACTCTGTACGCAATG...GGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAATATACAATCTTCTCTaGGAGAGTAAGAGGCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: QEAGLVTILEQEVMLHRPIYNLL*ESKRPV Trigger: AACCGGCCTCTTACTCTCTCAGAGAAGATTGTATAT...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGGATCAGGCACTAAGTaGTCCTTGAATTCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLGSGTK*SLNSSA Trigger: AGCAGAAGAATTCAAGGATCACTTAGTGCCTGATCC...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAAGTCAGTTTCTGGATTaGACTTCAGGGTTCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VAWAAQRETKLNRKAGLESQFLD*TSGFLQ Trigger: TTGCAGGAACCCTGAAGTTCAATCCAGAAACTGACT...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | GCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATGGGTCCCATTGGGGTaGTTGATGACGCACTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQTRLGSDDAHGPVTKVTWVPLG*LMTHFR Trigger: TCTGAAGTGCGTCATCAAGCACCCCAATGGGACCCA...TGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR TCA 90 bp | CATGCTGCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAACAATCAAACCTACTCTaGTGTCCAGAGGCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HAAQTRLGSDDAHGPVTKQSNLL*CPEASL Trigger: AAGGCTGGCCTCTGGACATCAGAGTAGGTTTGATTG...TTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGCAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGACTTCTTGCCGTCCTTaGCTGTTAAGAAGTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLTSCRP*LLRSQF Trigger: AAACTGACTTCTTAACAGGCAAGGACGGCAAGAAGT...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | GGACTGCAGGCATGGGACACTGTCCCTGTTCTCTTCTTAATGTTACTCCTTGGAATCGGATGTACTCACTaGGCTCAAAATGGCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: GLQAWDTVPVLFLMLLLGIGCTH*AQNGSW Trigger: CCATGAGCCATTTTGAGCCCAGTGAGTACATCCGAT...TCCAAGGAGTAACATTAAGAAGAGAACAGGGACAGTGTCCCATGCCTGCAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135198.2 |
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| CDS-3UTR GCA 90 bp | CAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATCCCTGTTCGGCCTGTCTTaGTCAGGTACTTTTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QTRLGSDDAHGPVTKVTSLFGLS*SGTFSS Trigger: GGATGAAAAAGTACCTGAGCAAGACAGGCCGAACAG...GGATGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | CAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATCCGATGATCACAGTGGATaGTTGATGGTACAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: QTRLGSDDAHGPVTKVTSDDHSG*LMVQPP Trigger: AGGTGGCTGTACCATCAACCATCCACTGTGATCATC...GGATGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | ACAGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGTACTTTTTCATCCTGTaGTTGTATGGGAACACTGAC | + |
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Preference number: 4 (lower is better) Translates to: TVAWAAQRETKLNRKAGLYFFIL*LYGNTD Trigger: GTCAGTGTTCCCATACAACCACAGGATGAAAAAGTA...CAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR GCA 90 bp | CAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATCCCATAGCTTGAATTGGTaGAGCTGCCAATCAAACCTA | + |
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Preference number: 4 (lower is better) Translates to: QTRLGSDDAHGPVTKVTSHSLNW*SCQSNL Trigger: TAGGTTTGATTGGCAGCTGCACCAATTCAAGCTATG...GGATGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CCA 90 bp | AGGCTTCACCAGTCAACAGACTTAGAACTTTATTTAGAAGGTAGTTCTCTGCTGTTTCTGGGCTCAAAATaGCTCATGGCCACCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLHQSTDLELYLEGSSLLFLGSK*LMATLA Trigger: GGCCAAGGTGGCCATGAGCCATTTTGAGCCCAGAAA...CAGCAGAGAACTACCTTCTAAATAAAGTTCTAAGTCTGTTGACTGGTGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157003.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCTTCACACCGATCACCTaGGGACACTTCAGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: WAEARQEAGLVTILEQEVFTPIT*GHFSSQ Trigger: CTGGGAGCTGAAGTGTCCCAAGGTGATCGGTGTGAA...GACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | AGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGACTGCATGCTCCCGGCTaGAGCCCTCACCATAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCMGCSKRNQTEQEGGAGLHAPG*SPHHSS Trigger: AGAACTATGGTGAGGGCTCAAGCCGGGAGCATGCAG...TCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | GTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAAGTCCCATTGGGGTGCTaGATGACGCACTTCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: VAWAAQRETKLNRKAGLEVPLGC*MTHFRG Trigger: GCCTCTGAAGTGCGTCATCAAGCACCCCAATGGGAC...TTCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGATTTCTGCACCCATGTaGCAGATAGTTGCCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: HWAEARQEAGLVTILEQEISAPM*QIVAMP Trigger: TGGCATGGCAACTATCTGCAACATGGGTGCAGAAAT...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGTCTGTTCGGCCTGTCTaGCTCAGGTACTTTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: HWAEARQEAGLVTILEQESVRPV*LRYFFI Trigger: GATGAAAAAGTACCTGAGCAAGACAGGCCGAACAGA...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCACCCTGCTTCTTTAGATaGGTTTCGTGGATCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: QEAGLVTILEQEVMLHRPPCFFR*VSWILA Trigger: CGCCAGGATCCACGAAACCAATCTAAAGAAGCAGGG...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CACTGGGCTGAGGCTAGGCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGCGTACAGAGTTGGCTTaGCCATTTTCGATGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: HWAEARQEAGLVTILEQERTELA*PFSMLM Trigger: CATCAACATCGAAAATGGCAAAGCCAACTCTGTACG...CTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGCCTAGCCTCAGCCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | AGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGAGGGGTAAAGGGCCCATaGATATGTGGCTTTAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SCMGCSKRNQTEQEGGAGGVKGP*ICGFSS Trigger: TGAGCTAAAGCCACATATCAATGGGCCCTTTACCCC...TCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | GCAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAAGTCAGTTTCTGGATaGAACTTCAGGGTTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: AGSRSGHHLRAGGHAAQTKSVSG*NFRVPA Trigger: TGCAGGAACCCTGAAGTTCAATCCAGAAACTGACTT...GGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | AGTTGCATGGGCTGCTCAAAGAGAAACCAAACTGAACAGGAAGGCGGGGCTGGATTGCCATTTTCGATGTaGATGGCACCGATGAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SCMGCSKRNQTEQEGGAGLPFSM*MAPMSR Trigger: CCTGCTCATCGGTGCCATCAACATCGAAAATGGCAA...TCCAGCCCCGCCTTCCTGTTCAGTTTGGTTTCTCTTTGAGCAGCCCATGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGGTCTGGTCACCATCTTAGAGCAGGAGGTCATGCTGCACAGACCAGCATTGCGTACAGAGTaGGCTTTGCCATTTTCGATG | + |
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Preference number: 5 (lower is better) Translates to: QEAGLVTILEQEVMLHRPALRTE*ALPFSM Trigger: CATCGAAAATGGCAAAGCCAACTCTGTACGCAATGC...TGGTCTGTGCAGCATGACCTCCTGCTCTAAGATGGTGACCAGACCTGCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS CCA 90 bp | TCCTTGGATAAGGGACAGAAGCTCCAACACAAGATTTTCCTCTGCTaGGACCTTCGTTTCTGGGCTCAAAATGGCTCATGGCCACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLDKGQKLQHKIFLC*DLRFWAQNGSWPPW Trigger: CCAAGGTGGCCATGAGCCATTTTGAGCCCAGAAACGAAGGTCCCAGCAGAGGAAAATCTTGTGTTGGAGCTTCTGTCCCTTATCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157003.8 |
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| CDS-3UTR CAA 90 bp | CATGCTGCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAATCCTGGGTGACAGCATaGCGTACAGAGTTGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HAAQTRLGSDDAHGPVTKSWVTA*RTELAL Trigger: CAAAGCCAACTCTGTACGCAATGCTGTCACCCAGGA...TTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGCAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | GCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACAAATTCTTCTGCTAGGTaGGCAATGTCTGTTCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: AQTRLGSDDAHGPVTKVTNSSAR*AMSVRP Trigger: AGGCCGAACAGACATTGCCAACCTAGCAGAAGAATT...TGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | CAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATCCGCACCGATGAGCAGGTaGTTAGAGATGTTATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QTRLGSDDAHGPVTKVTSAPMSR*LEMLSR Trigger: TCTGGATAACATCTCTAACAACCTGCTCATCGGTGC...GGATGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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| CDS-3UTR CAA 90 bp | GCACAGACCAGATTAGGCTCTGATGATGCACATGGACCTGTGACAAAAGTGACATGTGGCTTTAGCTCATaGAGGTTAATTTCAATCACT | + |
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Preference number: 5 (lower is better) Translates to: AQTRLGSDDAHGPVTKVTCGFSS*RLISIT Trigger: AGTGATTGAAATTAACCTCAATGAGCTAAAGCCACA...TGTCACTTTTGTCACAGGTCCATGTGCATCATCAGAGCCTAATCTGGTCTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023116.7 |
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