Pregenerated sensors for ACNAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070985Ensembl transcript IDs: ENSMUST00000095086.3, ENSMUST00000107697.2, ENSMUST00000135976.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGCCAGCAATTCCCATCTaGTGTTTTTATCCCTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: LFVYLISFQWNWCECECKPAIPI*CFYPYN Trigger: GTTGTAGGGATAAAAACATCAGATGGGAATTGCTGG...CTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| 3UTR CCA 72 bp | GGTCTTTTCGTTTATCTCATTTCCTTCCAATGGAATTaGTGTGAATGTGAGTGTAAGAAAGCCAGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLFVYLISFQWN*CECECKKARRK Trigger: TTTTCTCCTGGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAGGTGGCTCTATGAGGTaGCCTGCCCCAGGGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQGGSMR*PAPGYA Trigger: GGCATACCCTGGGGCAGGCCACCTCATAGAGCCACC...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAATAAGGTGGCTCTATaGGGTGGCCTGCCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTNKVAL*GGLPQG Trigger: ACCCTGGGGCAGGCCACCTCATAGAGCCACCTTATT...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAATCCTGGGCTGCTGCGTaGGCCATGAGATCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQSWAAA*AMRSPP Trigger: TGGAGGAGATCTCATGGCTCACGCAGCAGCCCAGGA...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTAGGTGGCTCTATGAGGTaGCCTGCCCCAGGGTATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YNNSSIFATALYSGMDTLGGSMR*PAPGYA Trigger: GGCATACCCTGGGGCAGGCCACCTCATAGAGCCACC...TAGAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAAATAAGGTGGCTCTATaGGGTGGCCTGCCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQNKVAL*GGLPQG Trigger: ACCCTGGGGCAGGCCACCTCATAGAGCCACCTTATT...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACACCAGCATCCTTCCACTaGTTCTTCCATGCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTPASFH*FFHASG Trigger: TCCGGAGGCATGGAAGAAGCAGTGGAAGGATGCTGG...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCCATTCTCTCCCACAATaGAGAGGATCTTCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLHSLPQ*RGSSPG Trigger: CCCAGGGGAAGATCCTCTTCATTGTGGGAGAGAATG...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAACGAACCCGACCTTCTTaGATCTGTTCCCGCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQRTRPS*ICSRLT Trigger: GGTTAAGCGGGAACAGATTCAAGAAGGTCGGGTTCG...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTTGATGGTCACTATCTaGGATGGAGGCAGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLLMVTI*DGGRPV Trigger: AACAGGCCTGCCTCCATCGCAGATAGTGACCATCAA...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACATTGATGGTCACTATCTaGGATGGAGGCAGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTLMVTI*DGGRPV Trigger: AACAGGCCTGCCTCCATCGCAGATAGTGACCATCAA...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTCCAAGTCCACCTCTTaGAGTTTCTCAGGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLSKSTS*SFSGRS Trigger: AGACCTGCCTGAGAAACTGCAAGAGGTGGACTTGGA...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCGAAAAAGAGGCCCATTaGGTGGACCCCTACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLEKEAH*VDPYIV Trigger: GACTATGTAGGGGTCCACCCAATGGGCCTCTTTTTC...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACATTTATGCAGACCGTaGCAATCACCTGCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPFPSNSHLMFLSLQHLCRP*QSPASG Trigger: ACCTGAAGCAGGTGATTGCCACGGTCTGCATAAATG...TTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAACTCCTCCAAAACACATaGGTCGACCCAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQLLQNT*VDPGQV Trigger: AACCTGTCCTGGGTCGACCCATGTGTTTTGGAGGAG...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGTCCTGGGCTGCTGCGTaGGCCATGAGATCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFVYLISFQWNWCECECKSWAAA*AMRSPP Trigger: TGGAGGAGATCTCATGGCTCACGCAGCAGCCCAGGA...CTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTCCAACAAACCAGCGCTaGACTCTCTGGCTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFPTNQR*TLWLAL Trigger: CAAGGCCAGCCAGAGAGTGCAGCGCTGGTTTGTTGG...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTCGCCAACGCCAGCACTaGAAAGCCATGGGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFVYLISFQWNWCECECRQRQH*KAMGSQ Trigger: TTGGCTTCCCATGGCTTTGCAGTGCTGGCGTTGGCG...ACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCCGCCAACGCCAGCACTaGAAAGCCATGGGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKARQRQH*KAMGSQ Trigger: TTGGCTTCCCATGGCTTTGCAGTGCTGGCGTTGGCG...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTAGCCTGCCCCAGGGTATaGCAGCATCCTTCCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLACPRV*QHPSTA Trigger: AGCAGTGGAAGGATGCTGGCATACCCTGGGGCAGGC...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTGTGTTCCTGGGCTGCTaGGTGAGCCATGAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFVYLISFQWNWCECECVFLGC*VSHEIS Trigger: GGAGATCTCATGGCTCACGCAGCAGCCCAGGAACAC...ACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCGTGTTCCTGGGCTGCTaGGTGAGCCATGAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMFLSLQQFQHFRYSTLLVFLGC*VSHEIS Trigger: GGAGATCTCATGGCTCACGCAGCAGCCCAGGAACAC...GAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCCTGGCTGTTGGATCTTaGGGTGAGATAGTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLLAVGS*GEIVGS Trigger: ACTTCCTACTATCTCACCCCAAGATCCAACAGCCAG...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTAAAGAGGATCTTCCCCTaGGCCTTTTCCACGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YNNSSIFATALYSGMDTLKRIFP*AFSTGS Trigger: ACTTCCCGTGGAAAAGGCCCAGGGGAAGATCCTCTT...TAGAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAGGCACGAAATTCAACTaGAGGGAGAAAAAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQGTKFN*REKKGS Trigger: GGAGCCCTTTTTCTCCCTCCAGTTGAATTTCGTGCC...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCGAAGGAGGTGTTTCCTaGAGAACTTTTGGATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLEGGVS*RTFGSL Trigger: GAGAGATCCAAAAGTTCTTCAGGAAACACCTCCTTC...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAGACAGGTTGCCAGGATaGAAAGCAAAGGGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQDRLPG*KAKGRI Trigger: TATTCTCCCCTTTGCTTTGCATCCTGGCAACCTGTC...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCGGGAAGCCAAAAGACTaGCACGAAATTCAACTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLGKPKD*HEIQLD Trigger: GTCTAGTTGAATTTCGTGCCAGTCTTTTGGCTTCCC...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095086.3 |
||
| CDS-3UTR TCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCCGAACCCGACCTTCTTaGATCTGTTCCCGCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKARTRPS*ICSRLT Trigger: GGTTAAGCGGGAACAGATTCAAGAAGGTCGGGTTCG...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAACCAACAAACCAGCGCTaGACTCTCTGGCTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKPTNQR*TLWLAL Trigger: CAAGGCCAGCCAGAGAGTGCAGCGCTGGTTTGTTGG...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACCAGCATCCTTCCACTaGTTCTTCCATGCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLPASFH*FFHASG Trigger: TCCGGAGGCATGGAAGAAGCAGTGGAAGGATGCTGG...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACATTCTTCATCAGCCTATaGAAAGCCTTCTTGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTFFISL*KAFLGF Trigger: GAAACCCAAGAAGGCTTTCCATAGGCTGATGAAGAA...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTACATTTATGCAGACCGTaGCAATCACCTGCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YNNSSIFATALYSGMDTLHLCRP*QSPASG Trigger: ACCTGAAGCAGGTGATTGCCACGGTCTGCATAAATG...TAGAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGTTAGTGGGACGGCTGTaGTGGTGGTGGCCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFVYLISFQWNWCECECKLVGRL*WWWPHL Trigger: TAAATGGGGCCACCACCACCACAGCCGTCCCACTAA...CTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTATTAGTGGGACGGCTGTaGTGGTGGTGGCCCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLLVGRL*WWWPHL Trigger: TAAATGGGGCCACCACCACCACAGCCGTCCCACTAA...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTAAGAGGATCTTCCCCTaGGCCTTTTCCACGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFKRIFP*AFSTGS Trigger: ACTTCCCGTGGAAAAGGCCCAGGGGAAGATCCTCTT...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCAAGGGGAGAATAAGGTaGCTCTATGAGGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKAKGRIR*LYEVAC Trigger: GCAGGCCACCTCATAGAGCCACCTTATTCTCCCCTT...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTAGGGAAGCCAAAAGACTaGCACGAAATTCAACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YNNSSIFATALYSGMDTLGKPKD*HEIQLE Trigger: CTCCAGTTGAATTTCGTGCCAGTCTTTTGGCTTCCC...TAGAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTTCATCTTTCACTGTTaGCTTGATGGTCACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLFIFHC*LDGHYL Trigger: CAGATAGTGACCATCAAGGCAACAGTGAAAGATGAA...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCGAAAAAGAGGCCCATTaGGTGGACCCCTACATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKAEKEAH*VDPYIV Trigger: GACTATGTAGGGGTCCACCCAATGGGCCTCTTTTTC...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCAGCACTGCAAAGCCATaGGAAGCCAAAAGACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKASTAKP*EAKRLA Trigger: TGCCAGTCTTTTGGCTTCCCATGGCTTTGCAGTGCT...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCCTCCAAAACACATaGGTCGACCCAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLLLQNT*VDPGQV Trigger: AACCTGTCCTGGGTCGACCCATGTGTTTTGGAGGAG...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACATATGGAAAGCCTTCTTaGGTTTCAGAGAGAAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTYGKPS*VSERKR Trigger: TCTTTTTCTCTCTGAAACCCAAGAAGGCTTTCCATA...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGAAAGGACCTTTCCCTaGAGGGAGAAAAAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKERTFP*REKKGS Trigger: GGAGCCCTTTTTCTCCCTCCAGGGAAAGGTCCTTTC...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095086.3 |
||
| CDS-3UTR CCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTAAGCACTGCAAAGCCATaGGAAGCCAAAAGACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLSTAKP*EAKRLA Trigger: TGCCAGTCTTTTGGCTTCCCATGGCTTTGCAGTGCT...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCGAGATAGTAGGAAGTTaGCAGCTTCTTCAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLEIVGS*QLLQNT Trigger: AGTATTTTGAAGAAGCTGCCAACTTCCTACTATCTC...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAAAGGGGAGAATAAGGTaGCTCTATGAGGTGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKKGRIR*LYEVAC Trigger: GCAGGCCACCTCATAGAGCCACCTTATTCTCCCCTT...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | GGTCTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTATCCACAAGGGCATTTaGAGGTGTGGCTATCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFVYLISFQWNWCECECIHKGI*RCGYQL Trigger: AAGTTGATAGCCACACCTTCAAATGCCCTTGTGGAT...ACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCGAAGGAGGTGTTTCCTaGAGAACTTTTGGATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKAEGGVS*RTFGSL Trigger: GAGAGATCCAAAAGTTCTTCAGGAAACACCTCCTTC...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACAGGTCCAAACAGATaGAAAAGGGGCTGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFTGPNR*KRGCSS Trigger: TGATGAACAGCCCCTTTTGCATCTGTTTGGACCTGT...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAATCCAAGTCCACCTCTTaGAGTTTCTCAGGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKSKSTS*SFSGRS Trigger: AGACCTGCCTGAGAAACTGCAAGAGGTGGACTTGGA...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | TACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCTATATGGAAAGCCTTCTTaGGTTTCAGAGAGAAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNNSSIFATALYSGMDTLYGKPS*VSERKR Trigger: TCTTTTTCTCTCTGAAACCCAAGAAGGCTTTCCATA...TAGAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCCAAATCAATAATTCCTaGGAAAGGACCTTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKAQINNS*ERTFPW Trigger: CCAGGGAAAGGTCCTTTCCCAGGAATTATTGATTTG...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095086.3 |
||
| CDS-3UTR CCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAACTGGCTGTTGGATCTTaGGGTGAGATAGTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKLAVGS*GEIVGS Trigger: ACTTCCTACTATCTCACCCCAAGATCCAACAGCCAG...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTTTCCTGAAGAACTTTTaGATCTCTCTCCAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFFLKNF*ISLQEC Trigger: ACACTCCTGGAGAGAGATCCAAAAGTTCTTCAGGAA...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR TCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAATCCACAAGGGCATTTaGAGGTGTGGCTATCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKIHKGI*RCGYQL Trigger: AAGTTGATAGCCACACCTTCAAATGCCCTTGTGGAT...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | GTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAGCCTTCATCTTTCACTGTTaGCTTGATGGTCACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLISFQWNWCECECKKAFIFHC*LDGHYL Trigger: CAGATAGTGACCATCAAGGCAACAGTGAAAGATGAA...GGCTTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTATTCCTGAAGAACTTTTaGATCTCTCTCCAGGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLFLKNF*ISLQEC Trigger: ACACTCCTGGAGAGAGATCCAAAAGTTCTTCAGGAA...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CCA 90 bp | CTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCGAGATAGTAGGAAGTTaGCAGCTTCTTCAAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LMFLSLQQFQHFRYSTLLEIVGS*QLLQNT Trigger: AGTATTTTGAAGAAGCTGCCAACTTCCTACTATCTC...GAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGTCTGTGCATGTAACTTaGTATCCAACAATTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVYLISFQWNWCECECKSVHVT*YPTIHH Trigger: ATGATGAATTGTTGGATAGCAAGTTACATGCACAGA...CTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAATCTGTGCATGTAACTTaGTATCCAACAATTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVYLISFQWNWCECECKKSVHVT*YPTIHH Trigger: ATGATGAATTGTTGGATAGCAAGTTACATGCACAGA...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS TCA 90 bp | TTTGGATCTCTCTCCAGGAGTGTTCCTGGGCTGCTGCGTGAGCCATaGGATCTCCTCCAAAACACATGGGTCGACCCAGGACAGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGSLSRSVPGLLREP*DLLQNTWVDPGQVA Trigger: GGCAACCTGTCCTGGGTCGACCCATGTGTTTTGGAGGAGATCTCATGGCTCACGCAGCAGCCCAGGAACACTCCTGGAGAGAGATCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | GGATGGGTGTCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTaGTGGTGGTGGCCCCATTTATGCAGACCGTGGCAATCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GWVSQPDPGILVGRL*WWWPHLCRPWQSPA Trigger: AGCAGGTGATTGCCACGGTCTGCATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACACCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | CAGCCCCTGAAACATGGACCTCCATCCGTTCCAGAGCCTGTTGGATaGGTGTCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLKHGPPSVPEPVG*VSQPDPGILVGRLW Trigger: CCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACACCCATCCAACAGGCTCTGGAACGGATGGAGGTCCATGTTTCAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS GCA 90 bp | GGATGCAAAGCAAAGGGGAGAATAAGGTGGCTCTATGAGGTGGCCTaGCCCAGGGTATGCCAGCATCCTTCCACTGCTTCTTCCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCKAKGRIRWLYEVA*PRVCQHPSTASSMP Trigger: AGGCATGGAAGAAGCAGTGGAAGGATGCTGGCATACCCTGGGGCAGGCCACCTCATAGAGCCACCTTATTCTCCCCTTTGCTTTGCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | GTGTCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTGGTGGTaGTGGCCCCATTTATGCAGACCGTGGCAATCACCTGCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSQPDPGILVGRLWW*WPHLCRPWQSPASG Trigger: ACCTGAAGCAGGTGATTGCCACGGTCTGCATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | TGGGTGTCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTGGTaGTGGTGGCCCCATTTATGCAGACCGTGGCAATCACCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WVSQPDPGILVGRLW*WWPHLCRPWQSPAS Trigger: TGAAGCAGGTGATTGCCACGGTCTGCATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | TCCATCCGTTCCAGAGCCTGTTGGATGGGTGTCACAACCAGATCCTaGTATCTTAGTGGGACGGCTGTGGTGGTGGTGGCCCCATTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SIRSRACWMGVTTRS*YLSGTAVVVVAPFM Trigger: CATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACACCCATCCAACAGGCTCTGGAACGGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | TGTTCCCGCTTAACCCCAGGGCCAACAAACCAGCGCTGCACTCTCTaGCTGGCCTTGGATGGAATCCTGACTGTTTCTAGCCAGTTAACA | + |
|
Preference number: 5 (lower is better) Translates to: CSRLTPGPTNQRCTL*LALDGILTVSSQLT Trigger: TGTTAACTGGCTAGAAACAGTCAGGATTCCATCCAAGGCCAGCCAGAGAGTGCAGCGCTGGTTTGTTGGCCCTGGGGTTAAGCGGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | TCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTGGTGGTGGTaGCCCCATTTATGCAGACCGTGGCAATCACCTGCTTCAGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SQPDPGILVGRLWWW*PHLCRPWQSPASGN Trigger: GTTACCTGAAGCAGGTGATTGCCACGGTCTGCATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAATGGAGGCAGGCCTGTaGCTCGAATGGACACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTMEAGL*LEWTQA Trigger: AGCCTGTGTCCATTCGAGCAACAGGCCTGCCTCCAT...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS TCA 90 bp | CTTATTCTGGAGATATTGTGTAGTGTGACGGAAGCATACAGCCCCTaGAACATGGACCTCCATCCGTTCCAGAGCCTGTTGGATGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LILEILCSVTEAYSP*NMDLHPFQSLLDGC Trigger: ACACCCATCCAACAGGCTCTGGAACGGATGGAGGTCCATGTTTCAGGGGCTGTATGCTTCCGTCACACTACACAATATCTCCAGAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | GTCATTTTCATCTTTCACTGTTGCCTTGATGGTCACTATCTGCGATaGAGGCAGGCCTGTTGCTCGAATGGACACAGGCTCATCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VIFIFHCCLDGHYLR*RQACCSNGHRLIHK Trigger: CTTGTGGATGAGCCTGTGTCCATTCGAGCAACAGGCCTGCCTCCATCGCAGATAGTGACCATCAAGGCAACAGTGAAAGATGAAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 ENSMUST00000135976.2 |
||
| CDS GCA 90 bp | TTTCTCAGGCAGGTCTTTATAGGCAAAATACGCCAACGCCAGCACTaGAAAGCCATGGGAAGCCAAAAGACTGGCACGAAATTCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLRQVFIGKIRQRQH*KAMGSQKTGTKFNW Trigger: CCAGTTGAATTTCGTGCCAGTCTTTTGGCTTCCCATGGCTTTGCAGTGCTGGCGTTGGCGTATTTTGCCTATAAAGACCTGCCTGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCTGGCATGGACACTCCCGAACCCGACCTTCTaGAATCTGTTCCCGCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTTIPAFSLQHFTLAWTLPNPTF*NLFPLN Trigger: GTTAAGCGGGAACAGATTCAAGAAGGTCGGGTTCGG...GAGTGTCCATGCCAGAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACACCGAACCCGACCTTCTaGAATCTGTTCCCGCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PIPTLSQQFPSDVFIPTTPNPTF*NLFPLN Trigger: GTTAAGCGGGAACAGATTCAAGAAGGTCGGGTTCGG...TGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAATCGACCCAGGACAGGTaGCCAGGATGCAAAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQSTQDR*PGCKAK Trigger: CTTTGCTTTGCATCCTGGCAACCTGTCCTGGGTCGA...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 90 bp | CACCAATTCCTGGCTGTTGGATCTTGGGGTGAGATAGTAGGAAGTTaGCAGCTTCTTCAAAATACTCCAAGTCCACCTCTTGCAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQFLAVGSWGEIVGS*QLLQNTPSPPLAVS Trigger: AGAAACTGCAAGAGGTGGACTTGGAGTATTTTGAAGAAGCTGCCAACTTCCTACTATCTCACCCCAAGATCCAACAGCCAGGAATTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTCCGTTCCAGAGCCTGTaGGATGGGTGTCACAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFPFQSL*DGCHNQ Trigger: CTGGTTGTGACACCCATCCAACAGGCTCTGGAACGG...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTACTCCCGTTCCAGAGCCTGTaGGATGGGTGTCACAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMFLSLQQFQHFRYSTLLPFQSL*DGCHNQ Trigger: CTGGTTGTGACACCCATCCAACAGGCTCTGGAACGG...GAGTAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTTCGACCCAGGACAGGTaGCCAGGATGCAAAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSDVFIPTTIPAFSLQHFSTQDR*PGCKAK Trigger: CTTTGCTTTGCATCCTGGCAACCTGTCCTGGGTCGA...AAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAATGGAGGCAGGCCTGTaGCTCGAATGGACACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FVYLISFQWNWCECECKKMEAGL*LEWTQA Trigger: AGCCTGTGTCCATTCGAGCAACAGGCCTGCCTCCAT...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCTACCCTTTCCCAGCAATTCCCATCTGATGTTTTTATCCCTACAACAAGTAGAAGGCTTGGGATaGGAACACATTGTCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLPFPSNSHLMFLSLQQVEGLG*EHIVIF Trigger: GAAAATGACAATGTGTTCCAATCCCAAGCCTTCTAC...TTGTTGTAGGGATAAAAACATCAGATGGGAATTGCTGGGAAAGGGTAGGGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CATCTGATGTTTTTATCCCTACAACAATTCCAGCATTTTCGCTACAGCACTTTAACTCTCTGGCTGGCCTaGGATGGAATCCTGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLMFLSLQQFQHFRYSTLTLWLA*DGILTV Trigger: AACAGTCAGGATTCCATCCAAGGCCAGCCAGAGAGT...TAAAGTGCTGTAGCGAAAATGCTGGAATTGTTGTAGGGATAAAAACATCAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAAACTCTCTGGCTGGCCTaGGATGGAATCCTGACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVYLISFQWNWCECECKKTLWLA*DGILTV Trigger: AACAGTCAGGATTCCATCCAAGGCCAGCCAGAGAGT...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGTGGGATTGGAACACATaGTCATTTTCATCTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LFVYLISFQWNWCECECKWDWNT*SFSSFT Trigger: AGTGAAAGATGAAAATGACAATGTGTTCCAATCCCA...CTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS-3UTR CAA 90 bp | TTCGTTTATCTCATTTCCTTCCAATGGAATTGGTGTGAATGTGAGTGTAAGAAATGGGATTGGAACACATaGTCATTTTCATCTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FVYLISFQWNWCECECKKWDWNT*SFSSFT Trigger: AGTGAAAGATGAAAATGACAATGTGTTCCAATCCCA...TTTCTTACACTCACATTCACACCAATTCCATTGGAAGGAAATGAGATAAACGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 72 bp | TCCAGAGCCTGTTGGATGGGTGTCACAACCAGATCCTaGTATCTTAGTGGGACGGCTGTGGTGGTGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRACWMGVTTRS*YLSGTAVVVVA Trigger: GGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGACACCCATCCAACAGGCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS GCA 72 bp | GCAAAGGGGAGAATAAGGTGGCTCTATGAGGTGGCCTaGCCCAGGGTATGCCAGCATCCTTCCACTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AKGRIRWLYEVA*PRVCQHPSTAS Trigger: AGAAGCAGTGGAAGGATGCTGGCATACCCTGGGGCAGGCCACCTCATAGAGCCACCTTATTCTCCCCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 72 bp | TCACAACCAGATCCTGGTATCTTAGTGGGACGGCTGTaGTGGTGGTGGCCCCATTTATGCAGACCGTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SQPDPGILVGRL*WWWPHLCRPWQ Trigger: TTGCCACGGTCTGCATAAATGGGGCCACCACCACCACAGCCGTCCCACTAAGATACCAGGATCTGGTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CAA 72 bp | ATCTCCTCCAAAACACATGGGTCGACCCAGGACAGGTaGCCAGGATGCAAAGCAAAGGGGAGAATAAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSKTHGSTQDR*PGCKAKGRIRW Trigger: CCACCTTATTCTCCCCTTTGCTTTGCATCCTGGCAACCTGTCCTGGGTCGACCCATGTGTTTTGGAGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CAA 90 bp | AGCCATGAGATCTCCTCCAAAACACATGGGTCGACCCAGGACAGGTaGCCAGGATGCAAAGCAAAGGGGAGAATAAGGTGGCTCTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHEISSKTHGSTQDR*PGCKAKGRIRWLYE Trigger: CTCATAGAGCCACCTTATTCTCCCCTTTGCTTTGCATCCTGGCAACCTGTCCTGGGTCGACCCATGTGTTTTGGAGGAGATCTCATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS TCA 72 bp | GAGATATTGTGTAGTGTGACGGAAGCATACAGCCCCTaGAACATGGACCTCCATCCGTTCCAGAGCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EILCSVTEAYSP*NMDLHPFQSLL Trigger: CAACAGGCTCTGGAACGGATGGAGGTCCATGTTTCAGGGGCTGTATGCTTCCGTCACACTACACAATATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 72 bp | AAACATGGACCTCCATCCGTTCCAGAGCCTGTTGGATaGGTGTCACAACCAGATCCTGGTATCTTAGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KHGPPSVPEPVG*VSQPDPGILVG Trigger: TCCCACTAAGATACCAGGATCTGGTTGTGACACCCATCCAACAGGCTCTGGAACGGATGGAGGTCCATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CAA 72 bp | CTCCGGAGCCGGTCCATGGCCCTCTGTGCATGTAACTaGCTATCCAACAATTCATCATTCTCTCCCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: LRSRSMALCACN*LSNNSSFSPTM Trigger: CATTGTGGGAGAGAATGATGAATTGTTGGATAGCAAGTTACATGCACAGAGGGCCATGGACCGGCTCCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS GCA 72 bp | CAGGTCTTTATAGGCAAAATACGCCAACGCCAGCACTaGAAAGCCATGGGAAGCCAAAAGACTGGCACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QVFIGKIRQRQH*KAMGSQKTGTK Trigger: TTTCGTGCCAGTCTTTTGGCTTCCCATGGCTTTGCAGTGCTGGCGTTGGCGTATTTTGCCTATAAAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS CCA 72 bp | TCATCATTCTCTCCCACAATGAAGAGGATCTTCCCCTaGGCCTTTTCCACGGGAAGTATATTCTTATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFSPTMKRIFP*AFSTGSIFLFW Trigger: CCAGAATAAGAATATACTTCCCGTGGAAAAGGCCCAGGGGAAGATCCTCTTCATTGTGGGAGAGAATGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||
| CDS TCA 72 bp | GGAAGTATATTCTTATTCTGGAGATATTGTGTAGTGTaGCGGAAGCATACAGCCCCTGAAACATGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSIFLFWRYCVV*RKHTAPETWTS Trigger: GGAGGTCCATGTTTCAGGGGCTGTATGCTTCCGTCACACTACACAATATCTCCAGAATAAGAATATACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095086.3 ENSMUST00000107697.2 |
||