Pregenerated sensors for ACMSD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026348Ensembl transcript IDs: ENSMUST00000038006.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCCACCCCACCCCATGCCCAAGTTCCTTTACAGCTACTCAGGTaGAGCAGTAAGGGCCTAGAACAAGGGTGTCATGGTGTTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: PATPPHAQVPLQLLR*SSKGLEQGCHGVPP Trigger: GGGAGGAACACCATGACACCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGCATGGGGTGGGGTGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR GCA 90 bp | GGATTATTTGATGCAGCCATAGGCATGTGGAGGAGAGATGCTGCCTaGCACCCCACCCCATGCCCAAGTTCCTTTACAGCTACTCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: GLFDAAIGMWRRDAA*HPTPCPSSFTATQV Trigger: CACCTGAGTAGCTGTAAAGGAACTTGGGCATGGGGTGGGGTGGCAGGCAGCATCTCTCCTCCACATGCCTATGGCTGCATCAAATAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 90 bp | AAGCCTACCTATTTCTTTTTGAGGCAAGGTTTCACTGTGTATCACTaGCTGGCTATCCTAGAGCTTGCTATGCAGACCAAGCTGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KPTYFFLRQGFTVYH*LAILELAMQTKLAS Trigger: TGAGGCCAGCTTGGTCTGCATAGCAAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR GCA 90 bp | AGGGTGTCATGGTGTTCCTCCCTCCCCAGAGTTAACTCTGCCTCCTaGTCTGCTAAAGGGAAACGTATAGATGACATTCCTTTTAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: RVSWCSSLPRVNSAS*SAKGKRIDDIPFRK Trigger: TTTTCTAAAAGGAATGTCATCTATACGTTTCCCTTTAGCAGAGCAGGAGGCAGAGTTAACTCTGGGGAGGGAGGAACACCATGACACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 90 bp | GACATTCCTTTTAGAAAAGTTTCATCCGCTCTTAAGTCACACCTGTaGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCATCTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: DIPFRKVSSALKSHL*FQTSSLLVQLPSSV Trigger: AACAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGAAACTTTTCTAAAAGGAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR GCA 90 bp | AACCATTTTGTGTTGGGTCAGCATTTATTCCATAAGCATTTACCTTaGTTTCTTAACTGGCTTTTAGAACATTTGAGCTTGTGCATAGCC | + |
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Preference number: 1 (lower is better) Translates to: NHFVLGQHLFHKHLP*FLNWLLEHLSLCIA Trigger: GGCTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGGTAAATGCTTATGGAATAAATGCTGACCCAACACAAAATGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 90 bp | TTGGGTCAGCATTTATTCCATAAGCATTTACCTTGCTTTCTTAACTaGCTTTTAGAACATTTGAGCTTGTGCATAGCCTATGTGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: LGQHLFHKHLPCFLN*LLEHLSLCIAYVYF Trigger: AAAGTACACATAGGCTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGGTAAATGCTTATGGAATAAATGCTGACCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCACATGTGGAGGAGAGATaGTGCCTGCCACCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: NKRSGRRWSIETWMGRRAHVEER*CLPPHP Trigger: GGGGTGGGGTGGCAGGCAGCATCTCTCCTCCACATG...TGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR GCA 90 bp | AGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGTATTGCCACCCCACCCCATaGCCAAGTTCCTTTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: RWSIETWMGRRAEWGHGYCHPTP*PSSFTA Trigger: AGCTGTAAAGGAACTTGGGCATGGGGTGGGGTGGCA...ATACCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGGACTGGTCTGGAACTTaGATTGCTGATCCTCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RRWSIETWMGRRAEWGHGDWSGT*IADPLA Trigger: AGCAAGAGGATCAGCAATTCAAGTTCCAGACCAGTC...CCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGTGTCACTTTCTTCAGTaGCACCAGAAGAGGACATCA | + |
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Preference number: 2 (lower is better) Translates to: RRWSIETWMGRRAEWGHGCHFLQ*HQKRTS Trigger: TGATGTCCTCTTCTGGTGTCACTGAAGAAAGTGACA...CCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGTTCACTGTGTATCACTaGCTGGCTATCCTAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGFTVYH*LAILEL Trigger: AAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAA...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGTGTGGGAGGCTAAAATaGGTTTGTAGTACATTACTA | + |
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Preference number: 2 (lower is better) Translates to: RRWSIETWMGRRAEWGHGCGRLK*VCSTLL Trigger: TAGTAATGTACTACAAACTCATTTTAGCCTCCCACA...CCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAAGCGTGCAAACACAGACCCATTaGCTGTCTCTGCCTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FVLEWKGRELCVSPKLSVQTQTH*LSLPPE Trigger: CTCAGGAGGCAGAGACAGGCAATGGGTCTGTGTTTG...CACGCTTAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCCGCTCTTAAGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGTGGAACTTGAATTGCTaGTCCTCTTGCTTCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSALKSHLWFQTSSLLVQWNLNC*SSCFIL Trigger: CAGGATGAAGCAAGAGGATCAGCAATTCAAGTTCCA...CTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR GCA 90 bp | TTAATTGCTGAGCCATCTCTCCAAGCCTACCTATTTCTTTTTGAGGCAAGGTTTCCCATTGCCTGTCTCTaGCTCCTGAGTGCTGATGTA | + |
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Preference number: 2 (lower is better) Translates to: LIAEPSLQAYLFLFEARFPIACL*LLSADV Trigger: TACATCAGCACTCAGGAGGCAGAGACAGGCAATGGG...AAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAGATGGCTCAGCAATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAAGCGTGCTATGCAGACCAAGCTaGCCTCAAACACAGACCCAT | + |
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Preference number: 2 (lower is better) Translates to: FVLEWKGRELCVSPKLSVLCRPS*PQTQTH Trigger: ATGGGTCTGTGTTTGAGGCCAGCTTGGTCTGCATAG...CACGCTTAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCACCTGTTAATAGGGAGCCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGCTACCTATTTCTTTTTaGGGCAAGGTTTCACTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QSPVNREPGFVLEWKGRELPISF*GKVSLC Trigger: ACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAG...CTCCCTTCCTTTCCATTCTAGTACAAAGCCAGGCTCCCTATTAACAGGTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGCTTAAGTCACACCTGTaGTTTCAAACTTCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TRDQEGDGALRHGWGEEQLKSHL*FQTSSL Trigger: AAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAG...CTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CCA 90 bp | CACCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTGAGCCACCATGTGGTCCTTGCTTTCTTAACTaGCTTTTAGAACATTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: HQKRTSDPITNGCEPPCGPCFLN*LLEHLS Trigger: GCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGG...ACCACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | GCTATGGAAGGATTATTTGATGCAGCCATAGGCATGTaGAGGAGAGATGCTGCCTGCCACCCCACCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: AMEGLFDAAIGM*RRDAACHPTPC Trigger: GCATGGGGTGGGGTGGCAGGCAGCATCTCTCCTCCACATGCCTATGGCTGCATCAAATAATCCTTCCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | CCACCCCATGCCCAAGTTCCTTTACAGCTACTCAGGTaGAGCAGTAAGGGCCTAGAACAAGGGTGTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: PPHAQVPLQLLR*SSKGLEQGCHG Trigger: ACCATGACACCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGCATGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGGAATTGCTGATCCTCTaGCTTCATCCTGAGGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGELLIL*LHPEGD Trigger: ATCCCCCTCAGGATGAAGCAAGAGGATCAGCAATTC...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR GCA 72 bp | TGGTGTTCCTCCCTCCCCAGAGTTAACTCTGCCTCCTaGTCTGCTAAAGGGAAACGTATAGATGACATTCCT | + |
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Preference number: 3 (lower is better) Translates to: WCSSLPRVNSAS*SAKGKRIDDIP Trigger: AGGAATGTCATCTATACGTTTCCCTTTAGCAGAGCAGGAGGCAGAGTTAACTCTGGGGAGGGAGGAACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR TCA 72 bp | CCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEDIRSHYKWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | CCCATTACAAATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: PITNGCEPPCGC*ELNSGPLEEQS Trigger: TGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATTTGTAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | AGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATaGGGAGAAGAGCAGAATGGGGTCATGGGTATTAGT | + |
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Preference number: 3 (lower is better) Translates to: RDQEGDGALRHG*GEEQNGVMGIS Trigger: ACTAATACCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR TCA 72 bp | AGTCCAAAGTTAAGCGTGTGCTATGGAAGGATTATTTaGTGCAGCCATAGGCATGTGGAGGAGAGATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SPKLSVCYGRII*CSHRHVEERCC Trigger: GCAGCATCTCTCCTCCACATGCCTATGGCTGCATCAAATAATCCTTCCATAGCACACGCTTAACTTTGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCACTGTGTATCACTGGCTGGCTATCCTAGAGCTTGCTATGCAGACCAAGCTTGGCTTTTAGAACATTaGAGCTTGTGCATAGCCTAT | + |
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Preference number: 3 (lower is better) Translates to: FHCVSLAGYPRACYADQAWLLEH*SLCIAY Trigger: ATAGGCTATGCACAAGCTCAAATGTTCTAAAAGCCA...AGCTTGGTCTGCATAGCAAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | TATTTCTTTTTGAGGCAAGGTTTCACTGTGTATCACTaGCTGGCTATCCTAGAGCTTGCTATGCAGACCAAG | + |
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Preference number: 3 (lower is better) Translates to: YFFLRQGFTVYH*LAILELAMQTK Trigger: CTTGGTCTGCATAGCAAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | TCACCTGTTAATAGGGAGCCTGGCTTTGTACTAGAATaGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SPVNREPGFVLE*KGRELCVSPKL Trigger: TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGGCTCCCTATTAACAGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | TTTAGAAAAGTTTCATCCGCTCTTAAGTCACACCTGTaGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: FRKVSSALKSHL*FQTSSLLVQLP Trigger: TGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGAAACTTTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR-3UTR CAA 90 bp | TTAATTGCTGAGCCATCTCTCCAAGCCTACCTATTTCTTTTTGAGGCAAGGTTTCAAAACCATTTTGTGTaGGGTCAGCATTTATTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LIAEPSLQAYLFLFEARFQNHFV*GQHLFH Trigger: ATGGAATAAATGCTGACCCAACACAAAATGGTTTTG...AAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAGATGGCTCAGCAATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CCA 72 bp | TTAAGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTaGTCCAGCTCCCATCTTCTGTTTACATATTTATTT | + |
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Preference number: 3 (lower is better) Translates to: LSHTCGFKLLLF*SSSHLLFTYLF Trigger: AAATAAATATGTAAACAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGGCCAGCTCCGGGGCTTaGATAGGCAACGTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGASSGA*IGNVPK Trigger: TTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGC...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | ACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGCCCTTGCCTTGCTGTTaGAGCTGCACCCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TRDQEGDGALRHGWGEEQPLPCC*SCTQPP Trigger: TGGAGGCTGGGTGCAGCTCCAACAGCAAGGCAAGGG...CTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGTGGAGCAAATGGCCATaGTGGTCTCCGATGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGWSKWP*WSPMAF Trigger: GAATGCCATCGGAGACCACCATGGCCATTTGCTCCA...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | CAGTCACCTGTTAATAGGGAGCCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGGCTTCTCCCTTGCCTTaGTGTTGGAGCTGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSPVNREPGFVLEWKGREASPLP*CWSCTQ Trigger: CTGGGTGCAGCTCCAACAGCAAGGCAAGGGAGAAGC...CTCCCTTCCTTTCCATTCTAGTACAAAGCCAGGCTCCCTATTAACAGGTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | TTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAAGCGTGAGCTTCCCAGGCTCCTaGTCGCCCAGAGGAAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: FVLEWKGRELCVSPKLSVSFPGS*SPRGKG Trigger: CCCCTTTCCTCTGGGCGAGCAGGAGCCTGGGAAGCT...CACGCTTAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGTCTGATACGAACTTCTaGGTCCCAGCAGTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGSDTNF*VPAVLL Trigger: CAACAGAACTGCTGGGACCCAGAAGTTCGTATCAGA...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGCAATTCTTCCTATGGTaGAGGGGAAAGCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: TRDQEGDGALRHGWGEEQQFFLW*RGKHHL Trigger: GAGGTGGTGCTTTCCCCTTCACCATAGGAAGAATTG...CTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGGATCTGGGCGCATGTTaGATCCATGGGCAATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TRDQEGDGALRHGWGEEQDLGAC*IHGQFF Trigger: GAAGAATTGCCCATGGATTCAACATGCGCCCAGATC...CTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGCGCATGTTGAATCCATaGGCAATTCTTCCTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRWSIETWMGRRAEWGHGRMLNP*AILPMV Trigger: CACCATAGGAAGAATTGCCCATGGATTCAACATGCG...CCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | CCTACCTATTTCTTTTTGAGGCAAGGTTTCACTGTGTATCACTGGCTGGCTATCTCAGACGGATTGTCCTaGGCACAGAGATCTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PTYFFLRQGFTVYHWLAISDGLS*AQRSGR Trigger: GCGCCCAGATCTCTGTGCCCAGGACAATCCGTCTGA...GATAGCCAGCCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CAA 72 bp | GCCCAGACTGGTCTGGAACTTGAATTGCTGATCCTCTaGCTTCATCCTGAGGGGGATATTCCATTTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AQTGLELELLIL*LHPEGDIPFLG Trigger: CCCCAAAAATGGAATATCCCCCTCAGGATGAAGCAAGAGGATCAGCAATTCAAGTTCCAGACCAGTCTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | GACACCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTGAGCCACCATGTGAGCAAATGGCCATGGTaGTCTCCGATGGCATTCCTA | + |
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Preference number: 4 (lower is better) Translates to: DTRRGHQIPLQMVVSHHVSKWPW*SPMAFL Trigger: TAGGAATGCCATCGGAGACCACCATGGCCATTTGCT...CACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| 3UTR CAA 72 bp | ACAAATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAATCAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TNGCEPPCGCWE*NSGPLEEQSVF Trigger: GAACACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR TCA 90 bp | CACCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTGAGCCACCATGTGGTTCTGGTTCATTTCTCTaGTACGAACTTCTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HQKRTSDPITNGCEPPCGSGSFL*YELLGP Trigger: GGGACCCAGAAGTTCGTATCAGAGAAATGAACCAGA...ACCACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | TTTCACTGTGTATCACTGGCTGGCTATCCTAGAGCTTGCTATGCAGACCAAGCTTGCATATCCCAGGGATaGACGAACAGAGAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHCVSLAGYPRACYADQACISQG*TNREQF Trigger: GAACTGTTCTCTGTTCGTGCATCCCTGGGATATGCA...AGCTTGGTCTGCATAGCAAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCATCTTCTGTCCCAGCAGTTCTGTTaGATCACTCTGAAGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTCGFKLLLFWSSSHLLSQQFC*ITLKSF Trigger: GAAGCTCTTCAGAGTGATCCAACAGAACTGCTGGGA...CAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR TCA 90 bp | AGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCATCTTCTGCATCTGTCAATAGCTTaGGAGACAGAGGATCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHTCGFKLLLFWSSSHLLHLSIA*ETEDRE Trigger: TTCACGATCCTCTGTCTCTCAAGCTATTGACAGATG...CAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | CCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAATTCGTCCATCCATCTaGATATCCCAGGGATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PGFVLEWKGRELCVSPKLIRPSI*ISQGCT Trigger: CGTGCATCCCTGGGATATGCAGATGGATGGACGAAT...TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCGCTCTTAAGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGATGTGGGAGCCAATCTaGATTCCTGGAAATCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSALKSHLWFQTSSLLVQMWEPI*IPGNPS Trigger: GCTAGGATTTCCAGGAATCCAGATTGGCTCCCACAT...CTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAACTGTGGAAAGAGCTTaGACTGTCACTCCTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFVLEWKGRELCVSPKLTVERA*TVTPFW Trigger: CCAGAAAGGAGTGACAGTCCAAGCTCTTTCCACAGT...TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CCA 90 bp | CCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTAAAGGCAGCCAGTATTTaGCCATTCGTCCATCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFVLEWKGRELCVSPKLKAASI*PFVHPS Trigger: AGATGGATGGACGAATGGCCAAATACTGGCTGCCTT...TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCTATTTCTTTTTGAGGCAAGGTTTCACTGTGTATCACTGGCTGGCTATCCATCAAACTCTGCCATaGACTCTATCAGCTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTYFFLRQGFTVYHWLAIHQTLP*TLSASQ Trigger: CTGGGAAGCTGATAGAGTCCATGGCAGAGTTTGATG...GATAGCCAGCCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR GCA 90 bp | GACACCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTGAGCCACCATGTGTTCTTCATCAAACTCTaGCATGGACTCTATCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTRRGHQIPLQMVVSHHVFFIKL*HGLYQL Trigger: AAGCTGATAGAGTCCATGGCAGAGTTTGATGAAGAA...CACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR TCA 90 bp | TTTCACTGTGTATCACTGGCTGGCTATCCTAGAGCTTGCTATGCAGACCAAGCTTCCTTTGGTAGAATATaGGTGTGGATGTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHCVSLAGYPRACYADQASFGRI*VWMSIF Trigger: GAAAATTGACATCCACACTCATATTCTACCAAAGGA...AGCTTGGTCTGCATAGCAAGCTCTAGGATAGCCAGCCAGTGATACACAGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTATCATTGTTTAAAAACTaGCACAGCTCCAAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: PGFVLEWKGRELCVSPKLSLFKN*HSSKVS Trigger: GGATACTTTGGAGCTGTGCCAGTTTTTAAACAATGA...TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCTTTCTTAACTGGCTTTTAGAACATTTGAGCTTGTGCATAGCCTATGTGATCTTTTATCATCTTTaGTTCTCCCTTGCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFLNWLLEHLSLCIAYVIFYHL*FSLALL Trigger: CAGCAAGGCAAGGGAGAAGCAAAGATGATAAAAGAT...CACATAGGCTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS-3UTR CCA 90 bp | TTAATTGCTGAGCCATCTCTCCAAGCCTACCTATTTCTTTTTGAGGCAAGGTTTACTGTCACTCCTTTCTaGTTCATTTCTCTGATACGA | + |
|
Preference number: 4 (lower is better) Translates to: LIAEPSLQAYLFLFEARFTVTPF*FISLIR Trigger: TCGTATCAGAGAAATGAACCAGAAAGGAGTGACAGT...AAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAGATGGCTCAGCAATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| 3UTR CAA 72 bp | CATTTACCTTGCTTTCTTAACTGGCTTTTAGAACATTaGAGCTTGTGCATAGCCTATGTGTACTTTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPCFLNWLLEH*SLCIAYVYFTK Trigger: CTTTGTAAAGTACACATAGGCTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGGTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| 3UTR CAA 72 bp | CCTTGCTTTCTTAACTGGCTTTTAGAACATTTGAGCTaGTGCATAGCCTATGTGTACTTTACAAAGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PCFLNWLLEHLS*CIAYVYFTKIK Trigger: TTTTATCTTTGTAAAGTACACATAGGCTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS GCA 90 bp | GCCTTAACACAACGCTCCATCTCCTCGACGGCCAGCTCCGGGGCTTaGATAGGCAACGTCCCCAAACCCACAAACCTTCGAGGGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALTQRSISSTASSGA*IGNVPKPTNLRGYL Trigger: CAGATACCCTCGAAGGTTTGTGGGTTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCCGTCGAGGAGATGGAGCGTTGTGTTAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | GACACCAGAAGAGGACATCAGATCCCATTACAAATGGTTGTGAGCCACCATGTGGGCCAGCTCCGGGGCTaGCATAGGCAACGTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DTRRGHQIPLQMVVSHHVGQLRG*HRQRPQ Trigger: TTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCC...CACATGGTGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS GCA 90 bp | CCTACGAGCCAAGGCAGCCAGTATTTGGCCATTCGTCCATCCATCTaGATATCCCAGGGATGCACGAACAGAGAACAGTTCAGCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PTSQGSQYLAIRPSI*ISQGCTNREQFSLS Trigger: CGAGAGGCTGAACTGTTCTCTGTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTGGCTCGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CCA 90 bp | TGGTGGTCTCCGATGGCATTCCTACGAGCCAAGGCAGCCAGTATTTaGCCATTCGTCCATCCATCTGCATATCCCAGGGATGCACGAACA | + |
|
Preference number: 5 (lower is better) Translates to: WWSPMAFLRAKAASI*PFVHPSAYPRDART Trigger: TGTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTGGCTCGTAGGAATGCCATCGGAGACCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | GACGGATTGTCCTGGGCACAGAGATCTGGGCGCATGTTGAATCCATaGGCAATTCTTCCTATGGTGAAGGGGAAAGCACCACCTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DGLSWAQRSGRMLNP*AILPMVKGKAPPPC Trigger: ACACGGAGGTGGTGCTTTCCCCTTCACCATAGGAAGAATTGCCCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | GATCGTGAACCAGGGAGTCTGTGTAGAAGGAGCCAAGGTATTTTCTaGGGTCAGACGGATTGTCCTGGGCACAGAGATCTGGGCGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: DREPGSLCRRSQGIF*GQTDCPGHRDLGAC Trigger: ACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTCTGACCCCAGAAAATACCTTGGCTCCTTCTACACAGACTCCCTGGTTCACGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | ATGCACGAACAGAGAACAGTTCAGCCTCTCGGCCGCAGCATAGATTaGGAAGAGTTCCGGGTCATTCAGGTCCCATGTGTTGATGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MHEQRTVQPLGRSID*EEFRVIQVPCVDVG Trigger: TCCCACATCAACACATGGGACCTGAATGACCCGGAACTCTTCCCAATCTATGCTGCGGCCGAGAGGCTGAACTGTTCTCTGTTCGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | AGTTCCGGGTCATTCAGGTCCCATGTGTTGATGTGGGAGCCAATCTaGATTCCTGGAAATCCTAGCGCCTTAACACAACGCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSFRSHVLMWEPI*IPGNPSALTQRSIS Trigger: GGAGATGGAGCGTTGTGTTAAGGCGCTAGGATTTCCAGGAATCCAGATTGGCTCCCACATCAACACATGGGACCTGAATGACCCGGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | AAGGTATTTTCTGGGGTCAGACGGATTGTCCTGGGCACAGAGATCTaGGCGCATGTTGAATCCATGGGCAATTCTTCCTATGGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVFSGVRRIVLGTEI*AHVESMGNSSYGEG Trigger: CCCTTCACCATAGGAAGAATTGCCCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTCTGACCCCAGAAAATACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | GCCCAAGTTCCTTTACAGCTACTCAGGTGGAGCAGTAAGGGCCTAGAACAAGGGAACTGTGGAAAGAGCTaGGACTGTCACTCCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQVPLQLLRWSSKGLEQGNCGKS*DCHSFL Trigger: CAGAAAGGAGTGACAGTCCAAGCTCTTTCCACAGTT...CCCTTGTTCTAGGCCCTTACTGCTCCACCTGAGTAGCTGTAAAGGAACTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | AGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGAGATCTGGGCGCATGTaGAATCCATGGGCAATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRWSIETWMGRRAEWGHGRSGRM*NPWAIL Trigger: AAGAATTGCCCATGGATTCAACATGCGCCCAGATCT...CCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 90 bp | GCAACGTCCCCAAACCCACAAACCTTCGAGGGTATCTGGCAACGGTaGCAGCTAGGTCATTGTTTAAAAACTGGCACAGCTCCAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ATSPNPQTFEGIWQR*QLGHCLKTGTAPKY Trigger: ATACTTTGGAGCTGTGCCAGTTTTTAAACAATGACCTAGCTGCCACCGTTGCCAGATACCCTCGAAGGTTTGTGGGTTTGGGGACGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | CCTGGCTTTGTACTAGAATGGAAAGGAAGGGAGTTATGCGTGAGTCCAAAGTTATGCTTCTCCCTTGCCTaGCTGTTGGAGCTGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFVLEWKGRELCVSPKLCFSLA*LLELHP Trigger: TGGGTGCAGCTCCAACAGCAAGGCAAGGGAGAAGCA...TAACTTTGGACTCACGCATAACTCCCTTCCTTTCCATTCTAGTACAAAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | AGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCATCTTCTGCAAGGCAGCCAGTATTaGGCCATTCGTCCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SHTCGFKLLLFWSSSHLLQGSQY*AIRPSI Trigger: GATGGATGGACGAATGGCCAAATACTGGCTGCCTTG...CAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATCAGGAAGGAGATGGAGCATTGAGACATGGATGGGGAGAAGAGCAGGTGGCAGCTAGGTCATaGTTTAAAAACTGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRDQEGDGALRHGWGEEQVAARS*FKNWHS Trigger: GCTGTGCCAGTTTTTAAACAATGACCTAGCTGCCAC...CTGCTCTTCTCCCCATCCATGTCTCAATGCTCCATCTCCTTCCTGATCTCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | GGAGCATTGAGACATGGATGGGGAGAAGAGCAGAATGGGGTCATGGGTATTAGTTGTGCGAAGCACACTTaGAGTTTGGGAAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GALRHGWGEEQNGVMGISCAKHT*SLGNFS Trigger: TGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACA...ACTAATACCCATGACCCCATTCTGCTCTTCTCCCCATCCATGTCTCAATGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | TCATCCGCTCTTAAGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGGATCGGGCCATTCCTTaGGTAGAATATGAGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSALKSHLWFQTSSLLVQDRAIP*VEYECG Trigger: TCCACACTCATATTCTACCAAAGGAATGGCCCGATC...CTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | AGTCACACCTGTGGTTTCAAACTTCTTCTCTTCTGGTCCAGCTCCCATCTTCTGCATCTTTTATCATCTTaGCTTCTCCCTTGCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTCGFKLLLFWSSSHLLHLLSS*LLPCLA Trigger: AGCAAGGCAAGGGAGAAGCAAAGATGATAAAAGATG...CAGAAGATGGGAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | TTAATTGCTGAGCCATCTCTCCAAGCCTACCTATTTCTTTTTGAGGCAAGGTTTGTCCCAGCAGTTCTGTaGGATCACTCTGAAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIAEPSLQAYLFLFEARFVPAVL*DHSEEL Trigger: AAGCTCTTCAGAGTGATCCAACAGAACTGCTGGGAC...AAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAGATGGCTCAGCAATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCAAGCCTACCTATTTCTTTTTGAGGCAAGGTTTCACTGTGTATCACTGGAAGCACACTTTGAGTTaGGGAAACTTCTCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: LSKPTYFFLRQGFTVYHWKHTLS*GNFSNT Trigger: GGTGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTT...CCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS GCA 72 bp | CAACGCTCCATCTCCTCGACGGCCAGCTCCGGGGCTTaGATAGGCAACGTCCCCAAACCCACAAACCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: QRSISSTASSGA*IGNVPKPTNLR Trigger: TCGAAGGTTTGTGGGTTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCCGTCGAGGAGATGGAGCGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 72 bp | ACAACGCTCCATCTCCTCGACGGCCAGCTCCGGGGCTaGCATAGGCAACGTCCCCAAACCCACAAACCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: TTLHLLDGQLRG*HRQRPQTHKPS Trigger: CGAAGGTTTGTGGGTTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCCGTCGAGGAGATGGAGCGTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 90 bp | CGCCTTAACACAACGCTCCATCTCCTCGACGGCCAGCTCCGGGGCTaGCATAGGCAACGTCCCCAAACCCACAAACCTTCGAGGGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: RLNTTLHLLDGQLRG*HRQRPQTHKPSRVS Trigger: AGATACCCTCGAAGGTTTGTGGGTTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCCGTCGAGGAGATGGAGCGTTGTGTTAAGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS GCA 72 bp | TTGGCCATTCGTCCATCCATCTGCATATCCCAGGGATaGACGAACAGAGAACAGTTCAGCCTCTCGGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAIRPSICISQG*TNREQFSLSAA Trigger: TGCGGCCGAGAGGCTGAACTGTTCTCTGTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CAA 90 bp | ATGGTGGTCTCCGATGGCATTCCTACGAGCCAAGGCAGCCAGTATTaGGCCATTCGTCCATCCATCTGCATATCCCAGGGATGCACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: MVVSDGIPTSQGSQY*AIRPSICISQGCTN Trigger: GTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTGGCTCGTAGGAATGCCATCGGAGACCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CAA 90 bp | CTGGGGTCAGACGGATTGTCCTGGGCACAGAGATCTGGGCGCATGTaGAATCCATGGGCAATTCTTCCTATGGTGAAGGGGAAAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSDGLSWAQRSGRM*NPWAILPMVKGKAP Trigger: TGGTGCTTTCCCCTTCACCATAGGAAGAATTGCCCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTCTGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CCA 72 bp | CAGAGAACAGTTCAGCCTCTCGGCCGCAGCATAGATTaGGAAGAGTTCCGGGTCATTCAGGTCCCATGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QRTVQPLGRSID*EEFRVIQVPCV Trigger: AACACATGGGACCTGAATGACCCGGAACTCTTCCCAATCTATGCTGCGGCCGAGAGGCTGAACTGTTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CCA 72 bp | CCGATGGCATTCCTACGAGCCAAGGCAGCCAGTATTTaGCCATTCGTCCATCCATCTGCATATCCCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PMAFLRAKAASI*PFVHPSAYPRD Trigger: ATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTGGCTCGTAGGAATGCCATCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CCA 72 bp | GAGCCAAGGTATTTTCTGGGGTCAGACGGATTGTCCTaGGCACAGAGATCTGGGCGCATGTTGAATCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: EPRYFLGSDGLS*AQRSGRMLNPW Trigger: CCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTCTGACCCCAGAAAATACCTTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CCA 72 bp | CCAGGGAGTCTGTGTAGAAGGAGCCAAGGTATTTTCTaGGGTCAGACGGATTGTCCTGGGCACAGAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLCRRSQGIF*GQTDCPGHRDL Trigger: CAGATCTCTGTGCCCAGGACAATCCGTCTGACCCCAGAAAATACCTTGGCTCCTTCTACACAGACTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CAA 72 bp | ACAGAGAACAGTTCAGCCTCTCGGCCGCAGCATAGATaGGGAAGAGTTCCGGGTCATTCAGGTCCCATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TENSSASRPQHR*GRVPGHSGPMC Trigger: ACACATGGGACCTGAATGACCCGGAACTCTTCCCAATCTATGCTGCGGCCGAGAGGCTGAACTGTTCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
||
| CDS CAA 72 bp | TCCGATGGCATTCCTACGAGCCAAGGCAGCCAGTATTaGGCCATTCGTCCATCCATCTGCATATCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SDGIPTSQGSQY*AIRPSICISQG Trigger: TCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTGGCTCGTAGGAATGCCATCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 72 bp | TCCTGGGCACAGAGATCTGGGCGCATGTTGAATCCATaGGCAATTCTTCCTATGGTGAAGGGGAAAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SWAQRSGRMLNP*AILPMVKGKAP Trigger: TGGTGCTTTCCCCTTCACCATAGGAAGAATTGCCCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 72 bp | AAGGGGAAAGCACCACCTCCGTGTGCGAAGCACACTTaGAGTTTGGGAAACTTCTCAAACACCCCACCCATG | + |
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Preference number: 6 (lower is better) Translates to: KGKAPPPCAKHT*SLGNFSNTPPM Trigger: CATGGGTGGGGTGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACACGGAGGTGGTGCTTTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 90 bp | CCTATGGTGAAGGGGAAAGCACCACCTCCGTGTGCGAAGCACACTTaGAGTTTGGGAAACTTCTCAAACACCCCACCCATGATCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PMVKGKAPPPCAKHT*SLGNFSNTPPMIME Trigger: CTCCATGATCATGGGTGGGGTGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACACGGAGGTGGTGCTTTCCCCTTCACCATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 90 bp | GTGAAGGGGAAAGCACCACCTCCGTGTGCGAAGCACACTTTGAGTTaGGGAAACTTCTCAAACACCCCACCCATGATCATGGAGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: VKGKAPPPCAKHTLS*GNFSNTPPMIMEQM Trigger: CATTTGCTCCATGATCATGGGTGGGGTGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACACGGAGGTGGTGCTTTCCCCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS GCA 72 bp | CAAGGCAGCCAGTATTTGGCCATTCGTCCATCCATCTaGATATCCCAGGGATGCACGAACAGAGAACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: QGSQYLAIRPSI*ISQGCTNREQF Trigger: GAACTGTTCTCTGTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS TCA 72 bp | TTGGGAAGAGTTCCGGGTCATTCAGGTCCCATGTGTTaGTGTGGGAGCCAATCTGGATTCCTGGAAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: LGRVPGHSGPMC*CGSQSGFLEIL Trigger: TAGGATTTCCAGGAATCCAGATTGGCTCCCACATCAACACATGGGACCTGAATGACCCGGAACTCTTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 72 bp | CTGGCAACGGTGGCAGCTAGGTCATTGTTTAAAAACTaGCACAGCTCCAAAGTATCCTTAGGTTTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LATVAARSLFKN*HSSKVSLGLAQ Trigger: CTGGGCCAAACCTAAGGATACTTTGGAGCTGTGCCAGTTTTTAAACAATGACCTAGCTGCCACCGTTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 72 bp | CCAAACCCACAAACCTTCGAGGGTATCTGGCAACGGTaGCAGCTAGGTCATTGTTTAAAAACTGGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PNPQTFEGIWQR*QLGHCLKTGTA Trigger: AGCTGTGCCAGTTTTTAAACAATGACCTAGCTGCCACCGTTGCCAGATACCCTCGAAGGTTTGTGGGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 72 bp | GCAACGTCCCCAAACCCACAAACCTTCGAGGGTATCTaGCAACGGTGGCAGCTAGGTCATTGTTTAAAAACT | + |
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Preference number: 6 (lower is better) Translates to: ATSPNPQTFEGI*QRWQLGHCLKT Trigger: AGTTTTTAAACAATGACCTAGCTGCCACCGTTGCCAGATACCCTCGAAGGTTTGTGGGTTTGGGGACGTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 72 bp | AAAGCACCACCTCCGTGTGCGAAGCACACTTTGAGTTaGGGAAACTTCTCAAACACCCCACCCATGATCATG | + |
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Preference number: 6 (lower is better) Translates to: KAPPPCAKHTLS*GNFSNTPPMIM Trigger: CATGATCATGGGTGGGGTGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACACGGAGGTGGTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CCA 72 bp | CACTCCTTTCTGGTTCATTTCTCTGATACGAACTTCTaGGTCCCAGCAGTTCTGTTGGATCACTCTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HSFLVHFSDTNF*VPAVLLDHSEE Trigger: CTCTTCAGAGTGATCCAACAGAACTGCTGGGACCCAGAAGTTCGTATCAGAGAAATGAACCAGAAAGGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 90 bp | CTGGTTCATTTCTCTGATACGAACTTCTGGGTCCCAGCAGTTCTGTaGGATCACTCTGAAGAGCTTCCCATCTTTTATCATCTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LVHFSDTNFWVPAVL*DHSEELPIFYHLCF Trigger: GAAGCAAAGATGATAAAAGATGGGAAGCTCTTCAGAGTGATCCAACAGAACTGCTGGGACCCAGAAGTTCGTATCAGAGAAATGAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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| CDS CAA 72 bp | TTCTCTGATACGAACTTCTGGGTCCCAGCAGTTCTGTaGGATCACTCTGAAGAGCTTCCCATCTTTTATCAT | + |
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Preference number: 6 (lower is better) Translates to: FSDTNFWVPAVL*DHSEELPIFYH Trigger: ATGATAAAAGATGGGAAGCTCTTCAGAGTGATCCAACAGAACTGCTGGGACCCAGAAGTTCGTATCAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038006.8 |
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