Pregenerated sensors for ACKR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079355Ensembl transcript IDs: ENSMUST00000076147.6, ENSMUST00000188000.2, ENSMUST00000219146.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATCACACACACACACACACACAGACTTCCTCTTTGTGGCACAATaGGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGAT | + |
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Preference number: 1 (lower is better) Translates to: PSHTHTHTDFLFVAQ*VVSPSCQAVFLSLD Trigger: ATCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACAAAGAGGAAGTCTGTGTGTGTGTGTGTGTGTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR GCA 90 bp | CACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTACCCTaGCCCACCCCTTACTCCTTCTTTGTTATAAATTGCAACAACAGT | + |
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Preference number: 1 (lower is better) Translates to: HFAHLFTLWRLSSLP*PTPYSFFVINCNNS Trigger: ACTGTTGTTGCAATTTATAACAAAGAAGGAGTAAGGGGTGGGGCAGGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR TCA 90 bp | ACCCCTTACTCCTTCTTTGTTATAAATTGCAACAACAGTATTTGTTaGTGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TPYSFFVINCNNSIC*WLGLGVTQIFYLRR Trigger: CCTCCTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTGTTGCAATTTATAACAAAGAAGGAGTAAGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCGTGGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCCACTTGTTTACTCTCTaGCGTCTGTCTTCCTTACCC | + |
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Preference number: 2 (lower is better) Translates to: GRGHALPRVLYYRITVAVHLFTL*RLSSLP Trigger: GGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTG...GACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCCACGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTTTGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTTTAGTTTCCACACTTTaGCCACTTGTTTACTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSLWHNALFLPPAKLFSCLVSTL*PLVYSL Trigger: CAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAA...ACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACAAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR-3UTR GCA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAACTGTCTTCCTTACCCTaGCCCACCCCTTACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HALPRVLYYRITVAVRFELSSLP*PTPYSF Trigger: GAAGGAGTAAGGGGTGGGGCAGGGTAAGGAAGACAG...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTTCCTGTCATTAGATTTAGTTTCCACACTTTGCCCACTTGTTTACTCTCTCTGTCTTCCTTACCCTaGCCCACCCCTTACTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: CFPVIRFSFHTLPTCLLSLSSLP*PTPYSF Trigger: GAAGGAGTAAGGGGTGGGGCAGGGTAAGGAAGACAG...AGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAATGACAGGAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR-3UTR CCA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAACACTTGTTTACTCTCTaGCGTCTGTCTTCCTTACCC | + |
|
Preference number: 2 (lower is better) Translates to: HALPRVLYYRITVAVRFEHLFTL*RLSSLP Trigger: GGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTG...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTTTAGTTTCCACACTTTaGCCACTTGTTTACTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GHALPRVLYYRITVAVRFLVSTL*PLVYSL Trigger: CAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAA...AAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR CCA 72 bp | CTCACAGGAAGTTACAGAGATAGTACAGGATGGTCGTaGGCACGCATTACCCAGGGTTTTATATTACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTGSYRDSTGWS*ARITQGFILQN Trigger: ATTCTGTAATATAAAACCCTGGGTAATGCGTGCCCACGACCATCCTGTACTATCTCTGTAACTTCCTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| 3UTR GCA 72 bp | GCTGTTTTCCTGTCATTAGATTTAGTTTCCACACTTTaGCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVFLSLDLVSTL*PLVYSLASVFL Trigger: AAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAATGACAGGAAAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR TCA 72 bp | GGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTaGATAACCACCACTGTGGTGAAGATGCAAAACACC | + |
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Preference number: 3 (lower is better) Translates to: GFILQNYSCCQI*ITTTVVKMQNT Trigger: GGTGTTTTGCATCTTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTACCCTGCCCCGGGTCTCCCCGCTCCTaGTTGGCTGGGGGCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: PHFAHLFTLWRLSSLPCPGSPRS*LAGGFG Trigger: ACCAAAGCCCCCAGCCAATCAGGAGCGGGGAGACCC...GGGGCAGGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTACCCTGCCCCACACACAGCAACAGATaGTCCAACAGGGTCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PHFAHLFTLWRLSSLPCPTHSNR*SNRVSP Trigger: CGGGGAGACCCTGTTGGATCATCTGTTGCTGTGTGT...GGGGCAGGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | CCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTACCCTGCCCCAACTACGGAGTTCCCTaGGAGCCCAGTGACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PHFAHLFTLWRLSSLPCPNYGVP*EPSDKG Trigger: GCCTTTGTCACTGGGCTCGCAGGGAACTCCGTAGTT...GGGGCAGGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | GTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGATAACTACGGAGTTCCCTaGGAGCCCAGTGACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VAQCVVSPSCQAVFLSLDNYGVP*EPSDKG Trigger: GCCTTTGTCACTGGGCTCGCAGGGAACTCCGTAGTT...ATCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGACCTAGAATCCATCCGTaGACTGCATTAACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRPRIHP*TALTAQ Trigger: CTGGGCAGTTAATGCAGTTCACGGATGGATTCTAGG...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TGTTTTCCTGTCATTAGATTTAGTTTCCACACTTTGCCCACTTGTTTACTCTCTGGGTCTCCCCGCTCCTaGTTGGCTGGGGGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFPVIRFSFHTLPTCLLSGSPRS*LAGGFG Trigger: ACCAAAGCCCCCAGCCAATCAGGAGCGGGGAGACCC...AGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAATGACAGGAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | GTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGATGGACCACAAAGCCGATaGCGATTTCCAGCATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAQCVVSPSCQAVFLSLDGPQSR*RFPASE Trigger: TTCAGATGCTGGAAATCGGCATCGGCTTTGTGGTCC...ATCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGAGGACCACAAAGCCGATaGCGATTTCCAGCATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRGPQSR*RFPASE Trigger: TTCAGATGCTGGAAATCGGCATCGGCTTTGTGGTCC...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CCA 90 bp | CAGGATGGTCGTGGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTCTCCCCGCTCCTGATTaGCTGGGGGCTTTGGTAATT | + |
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Preference number: 4 (lower is better) Translates to: QDGRGHALPRVLYYRITVLPAPD*LGALVI Trigger: AATTACCAAAGCCCCCAGCCAATCAGGAGCGGGGAG...AACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCCACGACCATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| 3UTR CAA 72 bp | ACACACACACAGACTTCCTCTTTGTGGCACAATGCGTaGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: THTQTSSLWHNA*FLPPAKLFSCH Trigger: ATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACAAAGAGGAAGTCTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TTACTCACAGGAAGTTACAGAGATAGTACAGGATGGTCGTGGGCACGCATTACCATAATAGTATTCCGCTaGCTGGTTCAGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLTGSYRDSTGWSWARITIIVFR*LVQLQS Trigger: GCTCTGGAGCTGAACCAGTCAGCGGAATACTATTAT...GGTAATGCGTGCCCACGACCATCCTGTACTATCTCTGTAACTTCCTGTGAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGAATAATAGTATTCCGCTaGCTGGTTCAGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRIIVFR*LVQLQS Trigger: GCTCTGGAGCTGAACCAGTCAGCGGAATACTATTAT...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTTTGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCTTTTGCGAACTGCCTaGCCTCTTCTTTTATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSLWHNALFLPPAKLFSCLLRTA*PLLLCR Trigger: TCTGCATAAAAGAAGAGGTCAGGCAGTTCGCAAAAG...ACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACAAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | GGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTGGGTCTCCCCGCTCCTaGTTGGCTGGGGGCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GFYITELQLLSDLNNHHCGSPRS*LAGGFG Trigger: ACCAAAGCCCCCAGCCAATCAGGAGCGGGGAGACCC...ACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTCTAAGCAAAAAGCAGAGGCAGAGAGCAGTTTTATAACACACAGCAACAGATaGTCCAACAGGGTCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVSKQKAEAESSFITHSNR*SNRVSP Trigger: CGGGGAGACCCTGTTGGATCATCTGTTGCTGTGTGT...TATAAAACTGCTCTCTGCCTCTGCTTTTTGCTTAGACACACACACACACACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | GTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGATCTTTTGCGAACTGCCTaGCCTCTTCTTTTATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VAQCVVSPSCQAVFLSLDLLRTA*PLLLCR Trigger: TCTGCATAAAAGAAGAGGTCAGGCAGTTCGCAAAAG...ATCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGAAATCCATCCGTGAACTaGATTAACTGCCCAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRNPSVN*INCPER Trigger: CCTTTCTGGGCAGTTAATGCAGTTCACGGATGGATT...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TTACTCACAGGAAGTTACAGAGATAGTACAGGATGGTCGTGGGCACGCATTACCGGGGGCTTTGGTAATTaGCCAATATCTGTCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LLTGSYRDSTGWSWARITGGFGN*PISVNA Trigger: AGCATTGACAGATATTGGGCAATTACCAAAGCCCCC...GGTAATGCGTGCCCACGACCATCCTGTACTATCTCTGTAACTTCCTGTGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| CDS-3UTR CCA 90 bp | GGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTCTCCCCGCTCCTGATTaGCTGGGGGCTTTGGTAATT | + |
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Preference number: 4 (lower is better) Translates to: GHALPRVLYYRITVAVRFLPAPD*LGALVI Trigger: AATTACCAAAGCCCCCAGCCAATCAGGAGCGGGGAG...AAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGAGGGCTGACGTTACTTTaGACATCATTTTGCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRGLTLL*TSFCLE Trigger: TTCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCC...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | GTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGATGGGCTGACGTTACTTTaGACATCATTTTGCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: VAQCVVSPSCQAVFLSLDGLTLL*TSFCLE Trigger: TTCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCC...ATCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TTACTCACAGGAAGTTACAGAGATAGTACAGGATGGTCGTGGGCACGCATTACCGGGCTGACGTTACTTTaGACATCATTTTGCCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLTGSYRDSTGWSWARITGLTLL*TSFCLE Trigger: TTCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCC...GGTAATGCGTGCCCACGACCATCCTGTACTATCTCTGTAACTTCCTGTGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCACAATGCGTTGTTTCTCCCTCCTGCCAAGCTGTTTTCCTGTCATTAGATTTCCAGCATCTGAATaGATGCTTTCAGGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: CGTMRCFSLLPSCFPVIRFPASE*MLSGMF Trigger: GAACATCCCTGAAAGCATCCATTCAGATGCTGGAAA...TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | GGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTCCTAGAATCCATCCGTaGACTGCATTAACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GHALPRVLYYRITVAVRFPRIHP*TALTAQ Trigger: CTGGGCAGTTAATGCAGTTCACGGATGGATTCTAGG...AAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | TTAGATTTAGTTTCCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCCGATTTCCAGCATCTaGATGGATGCTTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LDLVSTLCPLVYSLASVFPISSI*MDAFRD Trigger: ATCCCTGAAAGCATCCATTCAGATGCTGGAAATCGG...GAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CCA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAACTCCCCGCTCCTGATTaGCTGGGGGCTTTGGTAATT | + |
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Preference number: 4 (lower is better) Translates to: HALPRVLYYRITVAVRFELPAPD*LGALVI Trigger: AATTACCAAAGCCCCCAGCCAATCAGGAGCGGGGAG...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTGGTGAAAACTACGGAGTTCCCTaGGAGCCCAGTGACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: YITELQLLSDLNNHHCGENYGVP*EPSDKG Trigger: GCCTTTGTCACTGGGCTCGCAGGGAACTCCGTAGTT...TTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGCCTAGAATCCATCCGTaGACTGCATTAACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QQYLLMVGSRCNTNILFEPRIHP*TALTAQ Trigger: CTGGGCAGTTAATGCAGTTCACGGATGGATTCTAGG...CTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CTTTGTTATAAATTGCAACAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACCCGATTTCCAGCATCTaGATGGATGCTTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LCYKLQQQYLLMVGSRCNPISSI*MDAFRD Trigger: ATCCCTGAAAGCATCCATTCAGATGCTGGAAATCGG...GTTACACCGAGACCCAACCATCAACAAATACTGTTGTTGCAATTTATAACAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TTAGATTTAGTTTCCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTTGCACATCATTTTaGCTAGAATCCATCCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LDLVSTLCPLVYSLASVFLCTSF*LESIRE Trigger: TTCACGGATGGATTCTAGGCAAAATGATGTGCAAAG...GAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTGGTGAAGGACCACAAAGCCGATaGCGATTTCCAGCATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: YITELQLLSDLNNHHCGEGPQSR*RFPASE Trigger: TTCAGATGCTGGAAATCGGCATCGGCTTTGTGGTCC...TTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGATAATAGTATTCCGCTaGCTGGTTCAGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QQYLLMVGSRCNTNILFEIIVFR*LVQLQS Trigger: GCTCTGGAGCTGAACCAGTCAGCGGAATACTATTAT...CTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR TCA 90 bp | CAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGCCGATTTCCAGCATCTaGATGGATGCTTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QQYLLMVGSRCNTNILFEPISSI*MDAFRD Trigger: ATCCCTGAAAGCATCCATTCAGATGCTGGAAATCGG...CTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAAAATCCATCCGTGAACTaGATTAACTGCCCAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: HALPRVLYYRITVAVRFENPSVN*INCPER Trigger: CCTTTCTGGGCAGTTAATGCAGTTCACGGATGGATT...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | GGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTCTTTGCACATCATTTTaGCTAGAATCCATCCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GHALPRVLYYRITVAVRFLCTSF*LESIRE Trigger: TTCACGGATGGATTCTAGGCAAAATGATGTGCAAAG...AAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | TATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTGGTGAAGGGGGCTTTGGTAATTaGCCAATATCTGTCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: YITELQLLSDLNNHHCGEGGFGN*PISVNA Trigger: AGCATTGACAGATATTGGGCAATTACCAAAGCCCCC...TTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CCA 90 bp | TATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTGGTGAATTTCCAGCATCTGAATaGATGCTTTCAGGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: YITELQLLSDLNNHHCGEFPASE*MLSGMF Trigger: GAACATCCCTGAAAGCATCCATTCAGATGCTGGAAA...TTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| 3UTR CAA 72 bp | GGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTaGAATAACCACCACTGTGGTGAAGATGCAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GFYITELQLLSD*NNHHCGEDAKH Trigger: GTGTTTTGCATCTTCACCACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR GCA 90 bp | GGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAATAACCACCACTGTCTTTGCACATCATTTTaGCTAGAATCCATCCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GFYITELQLLSDLNNHHCLCTSF*LESIRE Trigger: TTCACGGATGGATTCTAGGCAAAATGATGTGCAAAG...ACAGTGGTGGTTATTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | CCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCCTTACCCTGCCCCGATGGCATCTATGGCTaGGCAGAACTTAACAACGTT | + |
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Preference number: 5 (lower is better) Translates to: PHFAHLFTLWRLSSLPCPDGIYG*AELNNV Trigger: AACGTTGTTAAGTTCTGCCAAGCCATAGATGCCATC...GGGGCAGGGTAAGGAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS GCA 90 bp | CCCAGTGACAAAGGCCACTGTGAAGAAGGCAGGCAGGAAGACTTTTaGGAACTGCCTGACCTCTTCTTTTATGCAGATCACTTCGTACTG | + |
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Preference number: 5 (lower is better) Translates to: PSDKGHCEEGRQEDF*ELPDLFFYADHFVL Trigger: CAGTACGAAGTGATCTGCATAAAAGAAGAGGTCAGGCAGTTCGCAAAAGTCTTCCTGCCTGCCTTCTTCACAGTGGCCTTTGTCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | GGTCGTGGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCGATGGCATCTATGGCTaGGCAGAACTTAACAACGTT | + |
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Preference number: 5 (lower is better) Translates to: GRGHALPRVLYYRITVAVDGIYG*AELNNV Trigger: AACGTTGTTAAGTTCTGCCAAGCCATAGATGCCATC...GACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCCACGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076147.6 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | TTAGATTTAGTTTCCACACTTTGCCCACTTGTTTACTCTCTGGCGTCTGTCTTCAGGGCTGACGTTACTTaGCACATCATTTTGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: LDLVSTLCPLVYSLASVFRADVT*HIILPR Trigger: TCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCCT...GAAGACAGACGCCAGAGAGTAAACAAGTGGGCAAAGTGTGGAAACTAAATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | GGGCACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTAGGGCTGACGTTACTTaGCACATCATTTTGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: GHALPRVLYYRITVAVRFRADVT*HIILPR Trigger: TCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCCT...AAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAAGATTGGCTGGGGGCTTaGGTAATTGCCCAATATCTG | + |
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Preference number: 5 (lower is better) Translates to: HALPRVLYYRITVAVRFEDWLGA*VIAQYL Trigger: CAGATATTGGGCAATTACCAAAGCCCCCAGCCAATC...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | CAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGGATTGGCTGGGGGCTTaGGTAATTGCCCAATATCTG | + |
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Preference number: 5 (lower is better) Translates to: QQYLLMVGSRCNTNILFEDWLGA*VIAQYL Trigger: CAGATATTGGGCAATTACCAAAGCCCCCAGCCAATC...CTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | CACGCATTACCCAGGGTTTTATATTACAGAATTACAGTTGCTGTCAGATTTGAAAGGGCTGACGTTACTTaGCACATCATTTTGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: HALPRVLYYRITVAVRFERADVT*HIILPR Trigger: TCTAGGCAAAATGATGTGCAAAGTAACGTCAGCCCT...TTCAAATCTGACAGCAACTGTAATTCTGTAATATAAAACCCTGGGTAATGCGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS-3UTR CAA 90 bp | CAACAGTATTTGTTGATGGTTGGGTCTCGGTGTAACACAAATATTTTATTTGAGGATGGCATCTATGGCTaGGCAGAACTTAACAACGTT | + |
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Preference number: 5 (lower is better) Translates to: QQYLLMVGSRCNTNILFEDGIYG*AELNNV Trigger: AACGTTGTTAAGTTCTGCCAAGCCATAGATGCCATC...CTCAAATAAAATATTTGTGTTACACCGAGACCCAACCATCAACAAATACTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS GCA 72 bp | GTAATAGGCGTAAATCGCCACAACTACGGAGTTCCCTaGGAGCCCAGTGACAAAGGCCACTGTGAAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VIGVNRHNYGVP*EPSDKGHCEEG Trigger: GCCTTCTTCACAGTGGCCTTTGTCACTGGGCTCGCAGGGAACTCCGTAGTTGTGGCGATTTACGCCTATTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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| CDS GCA 72 bp | ACTGTGAAGAAGGCAGGCAGGAAGACTTTTGCGAACTaGCTGACCTCTTCTTTTATGCAGATCACTTCGTAC | + |
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Preference number: 6 (lower is better) Translates to: TVKKAGRKTFAN*LTSSFMQITSY Trigger: GTACGAAGTGATCTGCATAAAAGAAGAGGTCAGGCAGTTCGCAAAAGTCTTCCTGCCTGCCTTCTTCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076147.6 ENSMUST00000188000.2 ENSMUST00000219146.2 |
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