Pregenerated sensors for ACKR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044337Ensembl transcript IDs: ENSMUST00000065587.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGCACAGCACAGCCCTGCCTGCTGCCAGCTGCCAGCTGCCAGCTaGCAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TAQHSPACCQLPAAS*QLSGWASRRQPSWL Trigger: CAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGCTGGCAGCTGGCAGCTGGCAGCAGGCAGGGCTGTGCTGTGCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 90 bp | CCTGCCTGCTGCCAGCTGCCAGCTGCCAGCTGCCAGCTGTCAGGATaGGCATCCAGGCGGCAGCCATCTTGGCTGGAGAATGAGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: PACCQLPAASCQLSG*ASRRQPSWLENERQ Trigger: CTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGCTGGCAGCTGGCAGCTGGCAGCAGGCAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 90 bp | GCCAGCTGCCAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTaGCTGGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ASCQLSGWASRRQPS*LENERQEAWSHAFS Trigger: GGAGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 90 bp | GCTGCCAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGCTaGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: AASCQDGHPGGSHLG*RMRDRKHGHMPSPL Trigger: AAGAGGAGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | GCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGCTGGAGAATaGGAGACAGGAAGCATGGTCACATGCCTTCTCCTCTTCATACCA | + |
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Preference number: 1 (lower is better) Translates to: AVRMGIQAAAILAGE*ETGSMVTCLLLFIP Trigger: TGGTATGAAGAGGAGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | TTCTACTGTACACATGTCCATAAGAGCCTGTCCTGGTGCTGGCTTTaGTACGCAGCTCTGGCTGCACAGCACAGCACAGCGCAGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: FYCTHVHKSLSWCWL*YAALAAQHSTAQHS Trigger: GCTGTGCTGCGCTGTGCTGTGCTGTGCAGCCAGAGCTGCGTATCAAAGCCAGCACCAGGACAGGCTCTTATGGACATGTGTACAGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | AACCTCACAGAGATCCACCTGCCTCTGACTCTAGAGTGCTGGGCCTaGAGGTGCTTTGGGCTTGGAGAGTCATACAGCATACACAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: NLTEIHLPLTLECWA*RCFGLGESYSIHSS Trigger: CGAGCTGTGTATGCTGTATGACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGGTGGATCTCTGTGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | GAAGGTGCTTTGGGCTTGGAGAGTCATACAGCATACACAGCTCGCTaGCACCTAACCTCATGCCCTCAGCAGGATGGTCTGATGGACATG | + |
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Preference number: 1 (lower is better) Translates to: EGALGLESHTAYTAR*HLTSCPQQDGLMDM Trigger: CATGTCCATCAGACCATCCTGCTGAGGGCATGAGGTTAGGTGTCAGCGAGCTGTGTATGCTGTATGACTCTCCAAGCCCAAAGCACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | CTTCATACCACTCAAGCAACCAGACCCAAAGCTACATTGCTTTCTTaGAGAAACCACAGGACCCAGCCGCCCCATTTGCAACATGCACGT | + |
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Preference number: 1 (lower is better) Translates to: LHTTQATRPKATLLS*RNHRTQPPHLQHAR Trigger: ACGTGCATGTTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCTTTGGGTCTGGTTGCTTGAGTGGTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 90 bp | CTTCTCCTCTTCATACCACTCAAGCAACCAGACCCAAAGCTACATTaGTTTCTTGAAGAAACCACAGGACCCAGCCGCCCCATTTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: LLLFIPLKQPDPKLH*FLEETTGPSRPICN Trigger: GTTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCTTTGGGTCTGGTTGCTTGAGTGGTATGAAGAGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | CACCTACCTCTGACCTGCTCATCCTCCCCTGAACTCAAATGTTTTTaGAAATGTTCCTTCAGGAACCAAGGAATAGCACCCACCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: HLPLTCSSSPELKCF*KCSFRNQGIAPTLL Trigger: GAGCAGGGTGGGTGCTATTCCTTGGTTCCTGAAGGAACATTTTCAAAAACATTTGAGTTCAGGGGAGGATGAGCAGGTCAGAGGTAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 90 bp | CTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGTCTaGCATGTTTTTCCATGTGTTAGTGCTATGCATGCCATCCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LWPFSPTEHLLLACV*HVFPCVSAMHAIQS Trigger: GCTTTGGATGGCATGCATAGCACTAACACATGGAAAAACATGTCAGACACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 90 bp | CCCATTTCTAAAGGACACTTTCAAACTCTTCGTAGCATACATCAATaGACAGGCCAGGAACTTTCTTACACCCTGCTTTCCCTTAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PISKGHFQTLRSIHQ*TGQELSYTLLSLRR Trigger: CCTCCTAAGGGAAAGCAGGGTGTAAGAAAGTTCCTGGCCTGTGCATTGATGTATGCTACGAAGAGTTTGAAAGTGTCCTTTAGAAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 90 bp | GCCCGAAGTGTAACTCTACAATATGGTTCATGTAACAAACTGCATTaGTGGGCAGTTGTTGTTTCATATGCTGTGCCAGCATTAAACATT | + |
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Preference number: 1 (lower is better) Translates to: ARSVTLQYGSCNKLH*WAVVVSYAVPALNI Trigger: AATGTTTAATGCTGGCACAGCATATGAAACAACAACTGCCCAGCAATGCAGTTTGTTACATGAACCATATTGTAGAGTTACACTTCGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 90 bp | CGAAGTGTAACTCTACAATATGGTTCATGTAACAAACTGCATTGCTaGGCAGTTGTTGTTTCATATGCTGTGCCAGCATTAAACATTGCA | + |
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Preference number: 1 (lower is better) Translates to: RSVTLQYGSCNKLHC*AVVVSYAVPALNIA Trigger: TGCAATGTTTAATGCTGGCACAGCATATGAAACAACAACTGCCCAGCAATGCAGTTTGTTACATGAACCATATTGTAGAGTTACACTTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CAA 90 bp | GCCCCCAAGCAGATTGTCCTCAGAGCTGAGACAGGTAAAGGCAGCTaGGGGAGCCAGCCTATCTCTGAGCTCCTGCCTGGTGTTCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: APKQIVLRAETGKGS*GSQPISELLPGVPL Trigger: TAAAGGAACACCAGGCAGGAGCTCAGAGATAGGCTGGCTCCCCAAGCTGCCTTTACCTGTCTCAGCTCTGAGGACAATCTGCTTGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCTGACTCTAGAGTGCTGGGCCTGAAGGTGCTTTGGGCTTGGAGAGTCAAGGACATGATTTCCTaGGTAGACAGTGGGCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PASDSRVLGLKVLWAWRVKDMIS*VDSGQH Trigger: GTGCTGCCCACTGTCTACTCAGGAAATCATGTCCTT...GACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCCATCTTGGCTGGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTGCTACATTGCTTTCTTaGAGAAACCACAGGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: GSHLGWRMRDRKHGHMPSATLLS*RNHRTQ Trigger: CTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGC...AGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR CCA 90 bp | TCAACAGCCATTGAAATGCACCTACCTCTGACCTGCTCATCCTCCCCTGAACTCGAGAGACAGGAAGCATaGTCACATGCCTTCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: STAIEMHLPLTCSSSPELERQEA*SHAFSS Trigger: AGAGGAGAAGGCATGTGACCATGCTTCCTGTCTCTC...GAGTTCAGGGGAGGATGAGCAGGTCAGAGGTAGGTGCATTTCAATGGCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR CCA 90 bp | GATGGACATGTGGCTGGGGAAGACGGCAGGCAGATGTTTGTTAAGATAAGGACAGGCAGCCATCTTGGCTaGAGAATGAGAGACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DGHVAGEDGRQMFVKIRTGSHLG*RMRDRK Trigger: CTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCC...TGTCCTTATCTTAACAAACATCTGCCTGCCGTCTTCCCCAGCCACATGTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CAA 90 bp | TCTTCATACCACTCAAGCAACCAGACCCAAAGCTACATTGCTTTCTaGAAGAAACCACAGGACCCAGCCGCCCCATTTGCAACATGCACG | + |
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Preference number: 2 (lower is better) Translates to: SSYHSSNQTQSYIAF*KKPQDPAAPFATCT Trigger: CGTGCATGTTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCTTTGGGTCTGGTTGCTTGAGTGGTATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CAA 90 bp | ATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTaGCCTGTGTCTGACATGTTTTTCCATGTGTTAGTGCTATGCATG | + |
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Preference number: 2 (lower is better) Translates to: MVGLSGRSLPLNIFF*PVSDMFFHVLVLCM Trigger: CATGCATAGCACTAACACATGGAAAAACATGTCAGACACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGAGTTGTTGTTTCATATaGTGTGCCAGCATTAAACAT | + |
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Preference number: 2 (lower is better) Translates to: MVGLSGRSLPLNIFFLPVSCCFI*CASIKH Trigger: ATGTTTAATGCTGGCACAGCATATGAAACAACAACT...CACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | ACAGCACAGCACAGCACAGCCCTGCCTGCTGCCAGCTaGCAGCTGCCAGCTGCCAGCTGTCAGGATGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: TAQHSTALPAAS*QLPAASCQDGH Trigger: ATGCCCATCCTGACAGCTGGCAGCTGGCAGCTGGCAGCTGGCAGCAGGCAGGGCTGTGCTGTGCTGTGCTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | CCACCCTGCTCAGATCCATCCACCCAGTCCCATGGTTaGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTT | + |
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Preference number: 3 (lower is better) Translates to: PPCSDPSTQSHG*ALWPFSPTEHL Trigger: AAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCATGGGACTGGGTGGATGGATCTGAGCAGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | ATGGGCATCCAGGCGGCAGCCATCTTGGCTGGAGAATaGGAGACAGGAAGCATGGTCACATGCCTTCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: MGIQAAAILAGE*ETGSMVTCLLL Trigger: GAGGAGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | TGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGCTaGAGAATGAGAGACAGGAAGCATGGTCACATGCCT | + |
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Preference number: 3 (lower is better) Translates to: CQDGHPGGSHLG*RMRDRKHGHMP Trigger: AGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | CAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTaGCTGGAGAATGAGAGACAGGAAGCATGGTCACAT | + |
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Preference number: 3 (lower is better) Translates to: QLSGWASRRQPS*LENERQEAWSH Trigger: ATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | AGATTGTCCTCAGAGCTGAGACAGGTAAAGGCAGCTTaGGGAGCCAGCCTATCTCTGAGCTCCTGCCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: RLSSELRQVKAA*GASLSLSSCLV Trigger: CACCAGGCAGGAGCTCAGAGATAGGCTGGCTCCCCAAGCTGCCTTTACCTGTCTCAGCTCTGAGGACAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | CAGGATATTGGTGCCCTGCAGCTGACATGGTCAACATaGCCCTTGGGACCTCTAAGGCTACTGGCTGTGACT | + |
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Preference number: 3 (lower is better) Translates to: QDIGALQLTWST*PLGPLRLLAVT Trigger: AGTCACAGCCAGTAGCCTTAGAGGTCCCAAGGGGCATGTTGACCATGTCAGCTGCAGGGCACCAATATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | GACTCTAGAGTGCTGGGCCTGAAGGTGCTTTGGGCTTaGAGAGTCATACAGCATACACAGCTCGCTGACACC | + |
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Preference number: 3 (lower is better) Translates to: DSRVLGLKVLWA*RVIQHTQLADT Trigger: GGTGTCAGCGAGCTGTGTATGCTGTATGACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | GCCTCTGACTCTAGAGTGCTGGGCCTGAAGGTGCTTTaGGCTTGGAGAGTCATACAGCATACACAGCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: ASDSRVLGLKVL*AWRVIQHTQLA Trigger: AGCGAGCTGTGTATGCTGTATGACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | TTGGGCTTGGAGAGTCATACAGCATACACAGCTCGCTaGCACCTAACCTCATGCCCTCAGCAGGATGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LGLESHTAYTAR*HLTSCPQQDGL Trigger: CAGACCATCCTGCTGAGGGCATGAGGTTAGGTGTCAGCGAGCTGTGTATGCTGTATGACTCTCCAAGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | GAGATCCACCTGCCTCTGACTCTAGAGTGCTGGGCCTaGAGGTGCTTTGGGCTTGGAGAGTCATACAGCATA | + |
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Preference number: 3 (lower is better) Translates to: EIHLPLTLECWA*RCFGLGESYSI Trigger: TATGCTGTATGACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGGTGGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | ACCTCATGCCCTCAGCAGGATGGTCTGATGGACATGTaGCTGGGGAAGACGGCAGGCAGATGTTTGTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: TSCPQQDGLMDM*LGKTAGRCLLR Trigger: TCTTAACAAACATCTGCCTGCCGTCTTCCCCAGCCACATGTCCATCAGACCATCCTGCTGAGGGCATGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | ATGCCCCTTGGGACCTCTAAGGCTACTGGCTGTGACTaGGAAAGTCCATGTGCACAGGGGCTTTCCTATAGA | + |
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Preference number: 3 (lower is better) Translates to: MPLGTSKATGCD*ESPCAQGLSYR Trigger: TCTATAGGAAAGCCCCTGTGCACATGGACTTTCCCAGTCACAGCCAGTAGCCTTAGAGGTCCCAAGGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | GTCCCATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTaGACATCTTCTTCTTGCCTGTGTCTGACATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VPWLGSLAVLSH*TSSSCLCLTCF Trigger: AAAACATGTCAGACACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | TTCATACCACTCAAGCAACCAGACCCAAAGCTACATTaGTTTCTTGAAGAAACCACAGGACCCAGCCGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FIPLKQPDPKLH*FLEETTGPSRP Trigger: GGGGCGGCTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCTTTGGGTCTGGTTGCTTGAGTGGTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | AAACTATCAGGCATCAAGCCCTTTACAGGATATTGGTaGCCTGCAGCTGACATGGTCAACATGCCCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: KLSGIKPFTGYW*PAADMVNMPLG Trigger: CCCAAGGGGCATGTTGACCATGTCAGCTGCAGGGCACCAATATCCTGTAAAGGGCTTGATGCCTGATAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | CAGCCATCTTGGCTGGAGAATGAGAGACAGGAAGCATaGTCACATGCCTTCTCCTCTTCATACCACTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QPSWLENERQEA*SHAFSSSYHSS Trigger: GCTTGAGTGGTATGAAGAGGAGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | ACTCAAGCAACCAGACCCAAAGCTACATTGCTTTCTTaGAGAAACCACAGGACCCAGCCGCCCCATTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: TQATRPKATLLS*RNHRTQPPHLQ Trigger: TTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCTTTGGGTCTGGTTGCTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR CAA 90 bp | TCAACAGCCATTGAAATGCACCTACCTCTGACCTGCTCATCCTCCCCTGAACTCAGCTACATTGCTTTCTaGAAGAAACCACAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: STAIEMHLPLTCSSSPELSYIAF*KKPQDP Trigger: TGGGTCCTGTGGTTTCTTCAAGAAAGCAATGTAGCT...GAGTTCAGGGGAGGATGAGCAGGTCAGAGGTAGGTGCATTTCAATGGCTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR-3UTR CAA 90 bp | GATGGACATGTGGCTGGGGAAGACGGCAGGCAGATGTTTGTTAAGATAAGGACATGCATTGCTGGGCAGTaGTTGTTTCATATGCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: DGHVAGEDGRQMFVKIRTCIAGQ*LFHMLC Trigger: GCACAGCATATGAAACAACAACTGCCCAGCAATGCA...TGTCCTTATCTTAACAAACATCTGCCTGCCGTCTTCCCCAGCCACATGTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | GTAAAACTATCAGGCATCAAGCCCTTTACAGGATATTaGTGCCCTGCAGCTGACATGGTCAACATGCCCCTT | + |
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Preference number: 3 (lower is better) Translates to: VKLSGIKPFTGY*CPAADMVNMPL Trigger: AAGGGGCATGTTGACCATGTCAGCTGCAGGGCACCAATATCCTGTAAAGGGCTTGATGCCTGATAGTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | TTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGTCTaGCATGTTTTTCCATGTGTTAGTGCTATGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: FSPTEHLLLACV*HVFPCVSAMHA Trigger: GGCATGCATAGCACTAACACATGGAAAAACATGTCAGACACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR TCA 72 bp | AGTTTCACTCAACAGCCATTGAAATGCACCTACCTCTaGCCTGCTCATCCTCCCCTGAACTCAAATGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SFTQQPLKCTYL*PAHPPLNSNVF Trigger: AAAAACATTTGAGTTCAGGGGAGGATGAGCAGGTCAGAGGTAGGTGCATTTCAATGGCTGTTGAGTGAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | CCTGTGTCTGACATGTTTTTCCATGTGTTAGTGCTATaGATGCCATCCAAAGCCCAAACATGCTTTCAAACC | + |
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Preference number: 3 (lower is better) Translates to: PVSDMFFHVLVL*MPSKAQTCFQT Trigger: GGTTTGAAAGCATGTTTGGGCTTTGGATGGCATGCATAGCACTAACACATGGAAAAACATGTCAGACACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | AAAGGACACTTTCAAACTCTTCGTAGCATACATCAATaGACAGGCCAGGAACTTTCTTACACCCTGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: KGHFQTLRSIHQ*TGQELSYTLLS Trigger: GGAAAGCAGGGTGTAAGAAAGTTCCTGGCCTGTGCATTGATGTATGCTACGAAGAGTTTGAAAGTGTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR GCA 72 bp | GTAACTCTACAATATGGTTCATGTAACAAACTGCATTaGTGGGCAGTTGTTGTTTCATATGCTGTGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: VTLQYGSCNKLH*WAVVVSYAVPA Trigger: TGCTGGCACAGCATATGAAACAACAACTGCCCAGCAATGCAGTTTGTTACATGAACCATATTGTAGAGTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| 3UTR CCA 72 bp | ACTCTACAATATGGTTCATGTAACAAACTGCATTGCTaGGCAGTTGTTGTTTCATATGCTGTGCCAGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: TLQYGSCNKLHC*AVVVSYAVPAL Trigger: TAATGCTGGCACAGCATATGAAACAACAACTGCCCAGCAATGCAGTTTGTTACATGAACCATATTGTAGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGGCCTCAACCTCACAGAGATCCACCTGCCTCTGACTCTAGAGTGCTGGTATGCTGCACGAGACTaGCCACCCAGACGGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGLNLTEIHLPLTLECWYAARD*PPRRGW Trigger: CCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATA...CCAGCACTCTAGAGTCAGAGGCAGGTGGATCTCTGTGAGGTTGAGGCCAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGCCAGCTGCCAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGTGTTACATGGCCAGTTaGTGTCAGAGTAGTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAASCQLSGWASRRQPSWCYMAS*CQSSCQ Trigger: CTGGCAACTACTCTGACATCAACTGGCCATGTAACA...CCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGCTGGCAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTGCTGGCTTTGATACGCAGCTCTGGCTGCACAGCACAGCACAGCGCAGCAATGGGCCACTGGTTATaGTGCACGAGACTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVLALIRSSGCTAQHSAAMGHWL*CTRLTT Trigger: GGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCAT...TGCTGCGCTGTGCTGTGCTGTGCAGCCAGAGCTGCGTATCAAAGCCAGCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCTGACTCTAGAGTGCTGGGCCTGAAGGTGCTTTGGGCTTGGAGAGTCGGCATGGTGGGACACTaGACAGTGTCCACCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: PASDSRVLGLKVLWAWRVGMVGH*TVSTTM Trigger: CATTGTGGTGGACACTGTGCAGTGTCCCACCATGCC...GACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCTGACTCTAGAGTGCTGGGCCTGAAGGTGCTTTGGGCTTGGAGAGTCATCTTCCGGCTACTGTaGTTCTCCTGGTCGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PASDSRVLGLKVLWAWRVIFRLL*FSWSPD Trigger: ATCAGGCGACCAGGAGAAGCACAGTAGCCGGAAGAT...GACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGAAACCACAGGACCCAGCCGCCCCATTTGCAACATGCACGTGTCCCCCCCCACAGGTCTGCAATaGCCAGGTTCAAGATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEETTGPSRPICNMHVSPPTGLQ*PGSRCS Trigger: GCTACATCTTGAACCTGGCCATTGCAGACCTGTGGG...GGGGGACACGTGCATGTTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAG 57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGAAACCACAGGACCCAGCCGCCCCATTTGCAACATGCACGTGTCCCCCCAGTGTCCACCACAATaGAGTCGCTGCTGTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: LEETTGPSRPICNMHVSPQCPPQ*SRCCYM Trigger: CATGTAACAGCAGCGACTGCATTGTGGTGGACACTG...GGGGGACACGTGCATGTTGCAAATGGGGCGGCTGGGTCCTGTGGTTTCTTCAAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGGGCCACTGGTTATGCTaGACGAGACTGACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGLSGRSLPLNIFFLPVGHWLC*TRLTTQ Trigger: CTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCC...CACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGGGGTTGACACAGCAGTaGACCAAGGACAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVGLSGRSLPLNIFFLPVGLTQQ*TKDRHW Trigger: CCAGTGCCTGTCCTTGGTGCACTGCTGTGTCAACCC...CACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | ATGGTTGGGCTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTTGCCTGTGTCCCCCATGGGCCACTaGTTATGCTGCACGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MVGLSGRSLPLNIFFLPVSPMGH*LCCTRL Trigger: CAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGA...CACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAGCCCAACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCTGACTCTAGAGTGCTGGGCCTGAAGGTGCTTTGGGCTTGGAGAGTCGTCGCTGCTGTTACATaGCCAGTTGATGTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PASDSRVLGLKVLWAWRVVAAVT*PVDVRV Trigger: TACTCTGACATCAACTGGCCATGTAACAGCAGCGAC...GACTCTCCAAGCCCAAAGCACCTTCAGGCCCAGCACTCTAGAGTCAGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCATCTTGGCTGGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTTGTTGGAAGCAGATGTaGCCGTCTTCAGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLGWRMRDRKHGHMPSCWKQM*PSSGSR Trigger: CCTACTACCTGAAGACGGTCACATCTGCTTCCAACA...AGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCATCTTGGCTGGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTAGAGTACTCTGTCTCTaGCACTCTGGAGGCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSHLGWRMRDRKHGHMPSRVLCL*HSGGIN Trigger: ATTGATGCCTCCAGAGTGTCAGAGACAGAGTACTCT...AGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCATGGTCACATGCCTTCTCCTCTTCATACCACTCAAGCAACCAGACCCAGACCACCACAGAGTTaGCAATCATGCCGATCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RKHGHMPSPLHTTQATRPRPPQS*QSCRSR Trigger: TCGTGATCGGCATGATTGCCAACTCTGTGGTGGTCT...GGGTCTGGTTGCTTGAGTGGTATGAAGAGGAGAAGGCATGTGACCATGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | GATGGACATGTGGCTGGGGAAGACGGCAGGCAGATGTTTGTTAAGATAAGGACACCTGTGGTCTTAGCCTaGATATTCACCCAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DGHVAGEDGRQMFVKIRTPVVLA*IFTQTT Trigger: GGTGGTCTGGGTGAATATCCAGGCTAAGACCACAGG...TGTCCTTATCTTAACAAACATCTGCCTGCCGTCTTCCCCAGCCACATGTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | CGTAGCATACATCAATGCACAGGCCAGGAACTTTCTTACACCCTGCTTTCCCTTCGGGGTAGAAGGACCTaGAGTAGGTCTCATTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSIHQCTGQELSYTLLSLRGRRT*SRSHCW Trigger: CCAACAATGAGACCTACTGCAGGTCCTTCTACCCCG...AAGGGAAAGCAGGGTGTAAGAAAGTTCCTGGCCTGTGCATTGATGTATGCTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGGACACTTTCAAACTCTTCGTAGCATACATCAATGCACAGGCCAGGAACGATCAGCCACTCCTTaGTGCTGTGCTCGGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKGHFQTLRSIHQCTGQERSATP*CCARGR Trigger: TCTACCCCGAGCACAGCATCAAGGAGTGGCTGATCG...TTCCTGGCCTGTGCATTGATGTATGCTACGAAGAGTTTGAAAGTGTCCTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | CAAACTGCATTGCTGGGCAGTTGTTGTTTCATATGCTGTGCCAGCATTAAACATTGTAGAGCACGGGGTTaGCACAGCAGTGCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTALLGSCCFICCASIKHCRARG*HSSAPR Trigger: CCTTGGTGCACTGCTGTGTCAACCCCGTGCTCTACA...ATGTTTAATGCTGGCACAGCATATGAAACAACAACTGCCCAGCAATGCAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGGACACTTTCAAACTCTTCGTAGCATACATCAATGCACAGGCCAGGAACAGCAAAGCCCAAGATaGCAGAGACCAGCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGHFQTLRSIHQCTGQEQQSPR*QRPAPC Trigger: GCATGGAGCTGGTCTCTGTCATCTTGGGCTTTGCTG...TTCCTGGCCTGTGCATTGATGTATGCTACGAAGAGTTTGAAAGTGTCCTTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCATGGTCACATGCCTTCTCCTCTTCATACCACTCAAGCAACCAGACCCGGATGTAGTGTAAGATaGAGAAGATGTCCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKHGHMPSPLHTTQATRPGCSVR*RRCPAE Trigger: TTCTGCTGGACATCTTCTCCATCTTACACTACATCC...GGGTCTGGTTGCTTGAGTGGTATGAAGAGGAGAAGGCATGTGACCATGCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGGACACTTTCAAACTCTTCGTAGCATACATCAATGCACAGGCCAGGAACCACGTAGGAGAAGATaGTCTTCCGGCTACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKGHFQTLRSIHQCTGQEPRRRR*SSGYCA Trigger: AGCACAGTAGCCGGAAGATCATCTTCTCCTACGTGG...TTCCTGGCCTGTGCATTGATGTATGCTACGAAGAGTTTGAAAGTGTCCTTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| 3UTR CAA 72 bp | CTCTCTGGCCGTTCTCTCCCACTGAACATCTTCTTCTaGCCTGTGTCTGACATGTTTTTCCATGTGTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGRSLPLNIFF*PVSDMFFHVLV Trigger: CACTAACACATGGAAAAACATGTCAGACACAGGCAAGAAGAAGATGTTCAGTGGGAGAGAACGGCCAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR GCA 90 bp | ACTCAAATGTTTTTGAAAATGTTCCTTCAGGAACCAAGGAATAGCACCCACCCTGCAGCCACACCAAGATaGATACAACACGGCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: TQMFLKMFLQEPRNSTHPAATPR*IQHGVP Trigger: TGGTACGCCGTGTTGTATGCATCTTGGTGTGGCTGC...AGGGTGGGTGCTATTCCTTGGTTCCTGAAGGAACATTTTCAAAAACATTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CCA 90 bp | TTCCATGTGTTAGTGCTATGCATGCCATCCAAAGCCCAAACATGCTTTCAAACCAGCAGAACCACAAAATaGTACGGCAGCCAACATACC | + |
|
Preference number: 4 (lower is better) Translates to: FHVLVLCMPSKAQTCFQTSRTTK*YGSQHT Trigger: GGTATGTTGGCTGCCGTACCATTTTGTGGTTCTGCT...GGTTTGAAAGCATGTTTGGGCTTTGGATGGCATGCATAGCACTAACACATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGCCAGCTGCCAGCTGTCAGGATGGGCATCCAGGCGGCAGCCATCTTGGGAGGCATCAATGAGCTaGGTGAGACCTGTTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAASCQLSGWASRRQPSWEASMS*VRPVLA Trigger: GGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTC...CCAAGATGGCTGCCGCCTGGATGCCCATCCTGACAGCTGGCAGCTGGCAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 90 bp | TGTGTGATCTTGCATGTGAGCTCCCCCATGGGCCACTGGTTATGCTaGACGAGACTGACCACCCAGACGGGGATGGTGATGACGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CVILHVSSPMGHWLC*TRLTTQTGMVMTTH Trigger: GTGGGTCGTCATCACCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATGCAAGATCACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 90 bp | AGGTGTGTGATCTTGCATGTGAGCTCCCCCATGGGCCACTGGTTATaGTGCACGAGACTGACCACCCAGACGGGGATGGTGATGACGACC | + |
|
Preference number: 5 (lower is better) Translates to: RCVILHVSSPMGHWL*CTRLTTQTGMVMTT Trigger: GGTCGTCATCACCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATGCAAGATCACACACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGCCTCAACCTCACAGAGATCCACCTGCCTCTGACTCTAGAGTGCTGGATGAGGTGTGTGATCTaGCATGTGAGCTCCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GPGLNLTEIHLPLTLECWMRCVI*HVSSPM Trigger: CATGGGGGAGCTCACATGCAAGATCACACACCTCAT...CCAGCACTCTAGAGTCAGAGGCAGGTGGATCTCTGTGAGGTTGAGGCCAGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS TCA 90 bp | GGTACGGCAGCCAACATACCAGGAAGACCACCACGTAGGAGAAGATaGTCTTCCGGCTACTGTGCTTCTCCTGGTCGCCTGATGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GTAANIPGRPPRRRR*SSGYCASPGRLMLT Trigger: TGTCAGCATCAGGCGACCAGGAGAAGCACAGTAGCCGGAAGATCATCTTCTCCTACGTGGTGGTCTTCCTGGTATGTTGGCTGCCGTACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGGCCTCAACCTCACAGAGATCCACCTGCCTCTGACTCTAGAGTGCTGGGTTTTGGCCGAGTACTaGAAGATGAAGGCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GPGLNLTEIHLPLTLECWVLAEY*KMKAFI Trigger: GATGAAGGCCTTCATCTTCAAGTACTCGGCCAAAAC...CCAGCACTCTAGAGTCAGAGGCAGGTGGATCTCTGTGAGGTTGAGGCCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCATCTTGGCTGGAGAATGAGAGACAGGAAGCATGGTCACATGCCTTCTCAGACCACCACAGAGTaGGCAATCATGCCGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: GSHLGWRMRDRKHGHMPSQTTTE*AIMPIT Trigger: CGTGATCGGCATGATTGCCAACTCTGTGGTGGTCTG...AGAAGGCATGTGACCATGCTTCCTGTCTCTCATTCTCCAGCCAAGATGGCTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTGCTGGCTTTGATACGCAGCTCTGGCTGCACAGCACAGCACAGCGCAGCAATGCTCCCAAAGAGGTaGATGGAGAAAATGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLALIRSSGCTAQHSAAMLPKR*MEKMRC Trigger: ACACCTCATTTTCTCCATCAACCTCTTTGGGAGCAT...TGCTGCGCTGTGCTGTGCTGTGCAGCCAGAGCTGCGTATCAAAGCCAGCACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 90 bp | GAGAGGGTATACAGAAGCACGTTCTTGTTAGGCATGGTGGGACACTaGACAGTGTCCACCACAATGCAGTCGCTGCTGTTACATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERVYRSTFLLGMVGH*TVSTTMQSLLLHGQ Trigger: CTGGCCATGTAACAGCAGCGACTGCATTGTGGTGGACACTGTGCAGTGTCCCACCATGCCTAACAAGAACGTGCTTCTGTATACCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS CCA 90 bp | GGGACACTGCACAGTGTCCACCACAATGCAGTCGCTGCTGTTACATaGCCAGTTGATGTCAGAGTAGTTGCCAGGCTCTGCATAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTLHSVHHNAVAAVT*PVDVRVVARLCIVK Trigger: TTTGACTATGCAGAGCCTGGCAACTACTCTGACATCAACTGGCCATGTAACAGCAGCGACTGCATTGTGGTGGACACTGTGCAGTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS TCA 90 bp | GCACAGTGTCCACCACAATGCAGTCGCTGCTGTTACATGGCCAGTTaGTGTCAGAGTAGTTGCCAGGCTCTGCATAGTCAAACAAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQCPPQCSRCCYMAS*CQSSCQALHSQTSA Trigger: TGCACTTGTTTGACTATGCAGAGCCTGGCAACTACTCTGACATCAACTGGCCATGTAACAGCAGCGACTGCATTGTGGTGGACACTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS-3UTR CAA 90 bp | AGGAAGCATGGTCACATGCCTTCTCCTCTTCATACCACTCAAGCAACCAGACCCTTGGTGAGACCTGTTTaGGCCGAGTACTTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKHGHMPSPLHTTQATRPLVRPV*AEYLKM Trigger: CATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAA...GGGTCTGGTTGCTTGAGTGGTATGAAGAGGAGAAGGCATGTGACCATGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 72 bp | TTGCATGTGAGCTCCCCCATGGGCCACTGGTTATGCTaGACGAGACTGACCACCCAGACGGGGATGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LHVSSPMGHWLC*TRLTTQTGMVM Trigger: CATCACCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 72 bp | ATCTTGCATGTGAGCTCCCCCATGGGCCACTGGTTATaGTGCACGAGACTGACCACCCAGACGGGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILHVSSPMGHWL*CTRLTTQTGMV Trigger: CACCATCCCCGTCTGGGTGGTCAGTCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATGCAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS TCA 72 bp | GCCAACATACCAGGAAGACCACCACGTAGGAGAAGATaGTCTTCCGGCTACTGTGCTTCTCCTGGTCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ANIPGRPPRRRR*SSGYCASPGRL Trigger: CAGGCGACCAGGAGAAGCACAGTAGCCGGAAGATCATCTTCTCCTACGTGGTGGTCTTCCTGGTATGTTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS CCA 72 bp | ACGGGGTTGACACAGCAGTGCACCAAGGACAGGCACTaGGTGACATGCAACGCTGTAAAGAGCACATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGLTQQCTKDRH*VTCNAVKSTFS Trigger: GGAGAATGTGCTCTTTACAGCGTTGCATGTCACCCAGTGCCTGTCCTTGGTGCACTGCTGTGTCAACCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS CAA 90 bp | AAGATGCTCCCAAAGAGGTTGATGGAGAAAATGAGGTGTGTGATCTaGCATGTGAGCTCCCCCATGGGCCACTGGTTATGCTGCACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KMLPKRLMEKMRCVI*HVSSPMGHWLCCTR Trigger: TCTCGTGCAGCATAACCAGTGGCCCATGGGGGAGCTCACATGCAAGATCACACACCTCATTTTCTCCATCAACCTCTTTGGGAGCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS CAA 90 bp | GTCTCTGACACTCTGGAGGCATCAATGAGCTTGGTGAGACCTGTTTaGGCCGAGTACTTGAAGATGAAGGCCTTCATCAGCTCGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSDTLEASMSLVRPV*AEYLKMKAFISSYL Trigger: CAGGTACGAGCTGATGAAGGCCTTCATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTCCAGAGTGTCAGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS CAA 90 bp | AGGGCAGAGTACTCTGTCTCTGACACTCTGGAGGCATCAATGAGCTaGGTGAGACCTGTTTTGGCCGAGTACTTGAAGATGAAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAEYSVSDTLEASMS*VRPVLAEYLKMKAF Trigger: GAAGGCCTTCATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTCCAGAGTGTCAGAGACAGAGTACTCTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS TCA 72 bp | CCACCACAATGCAGTCGCTGCTGTTACATGGCCAGTTaGTGTCAGAGTAGTTGCCAGGCTCTGCATAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPQCSRCCYMAS*CQSSCQALHSQ Trigger: TTGACTATGCAGAGCCTGGCAACTACTCTGACATCAACTGGCCATGTAACAGCAGCGACTGCATTGTGGTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS TCA 72 bp | AGGACCTGCAGTAGGTCTCATTGTTGGAAGCAGATGTaGCCGTCTTCAGGTAGTAGGTATCAGGCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RTCSRSHCWKQM*PSSGSRYQAGT Trigger: TGTCCCTGCCTGATACCTACTACCTGAAGACGGTCACATCTGCTTCCAACAATGAGACCTACTGCAGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
||
| CDS GCA 72 bp | TACAGAAGCACGTTCTTGTTAGGCATGGTGGGACACTaGACAGTGTCCACCACAATGCAGTCGCTGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: YRSTFLLGMVGH*TVSTTMQSLLL Trigger: TAACAGCAGCGACTGCATTGTGGTGGACACTGTGCAGTGTCCCACCATGCCTAACAAGAACGTGCTTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| CDS CAA 72 bp | CCAAAGAGGTTGATGGAGAAAATGAGGTGTGTGATCTaGCATGTGAGCTCCCCCATGGGCCACTGGTTATGC | + |
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Preference number: 6 (lower is better) Translates to: PKRLMEKMRCVI*HVSSPMGHWLC Trigger: GCATAACCAGTGGCCCATGGGGGAGCTCACATGCAAGATCACACACCTCATTTTCTCCATCAACCTCTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| CDS CCA 72 bp | TGTAAGATGGAGAAGATGTCCAGCAGAACCACAAAATaGTACGGCAGCCAACATACCAGGAAGACCACCACG | + |
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Preference number: 6 (lower is better) Translates to: CKMEKMSSRTTK*YGSQHTRKTTT Trigger: CGTGGTGGTCTTCCTGGTATGTTGGCTGCCGTACCATTTTGTGGTTCTGCTGGACATCTTCTCCATCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| CDS CAA 72 bp | ACTCTGGAGGCATCAATGAGCTTGGTGAGACCTGTTTaGGCCGAGTACTTGAAGATGAAGGCCTTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLEASMSLVRPV*AEYLKMKAFIS Trigger: GCTGATGAAGGCCTTCATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTCCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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| CDS CAA 72 bp | TACTCTGTCTCTGACACTCTGGAGGCATCAATGAGCTaGGTGAGACCTGTTTTGGCCGAGTACTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: YSVSDTLEASMS*VRPVLAEYLKM Trigger: CATCTTCAAGTACTCGGCCAAAACAGGTCTCACCAAGCTCATTGATGCCTCCAGAGTGTCAGAGACAGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065587.5 |
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