Pregenerated sensors for ACKR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044534Ensembl transcript IDs: ENSMUST00000050327.5, ENSMUST00000214340.2, ENSMUST00000216326.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGTCTGAGGAGAGCAGGGAGCTGTTCACCGAGAGCCTTACTCTaGAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCTGCAGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: RSLRRAGSCSPRALL*SSPAWVGSRQSAGS Trigger: GCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAGTAAGGCTCTCGGTGAACAGCTCCCTGCTCTCCTCAGACTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 90 bp | CCAGGAAGCCACAGAAGCGCTGGGGTGGAAGTGGAGGGAGATCAGTaGAGAGCTGAAGTGGTTCAGCAGAGAGGATGGGGTCCAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: PGSHRSAGVEVEGDQ*RAEVVQQRGWGPGS Trigger: GCTTCCTGGACCCCATCCTCTCTGCTGAACCACTTCAGCTCTTCACTGATCTCCCTCCACTTCCACCCCAGCGCTTCTGTGGCTTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 90 bp | TCCAGGAAGCAGAAGGAGGAAGAGACAGTAATGAGTAAGGCCTGCTaGTGGTTGGGAACCACTGGGGCGAGCAGCACAGTCACGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SRKQKEEETVMSKAC*WLGTTGASSTVTLS Trigger: GGACAGCGTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACCACCAGCAGGCCTTACTCATTACTGTCTCTTCCTCCTTCTGCTTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 90 bp | TTGGCTGCTGAGGGCCAGGAAGCCACAGAAGCGCTGGGGTGGAAGTaGAGGGAGATCAGTGAAGAGCTGAAGTGGTTCAGCAGAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LAAEGQEATEALGWK*REISEELKWFSRED Trigger: ATCCTCTCTGCTGAACCACTTCAGCTCTTCACTGATCTCCCTCCACTTCCACCCCAGCGCTTCTGTGGCTTCCTGGCCCTCAGCAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 90 bp | GCAGGGTGGGCACAGTGCCTCCTTCCTCACCAACAAGGTGAGATCTaGGCCATGACTCCAGGAAGTAAAGGAATGAGCCAAACTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: AGWAQCLLPHQQGEI*AMTPGSKGMSQTLP Trigger: GGGAAGAGTTTGGCTCATTCCTTTACTTCCTGGAGTCATGGCTCAGATCTCACCTTGTTGGTGAGGAAGGAGGCACTGTGCCCACCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 90 bp | AGTGAACCTGGAATGCTTCAGAAACGAGTGGAAGCCAGTGTGCCCTaGACCCAGAGACCAGGAGGGAGTACGGTGGAGATAAAGTCACAG | + |
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Preference number: 1 (lower is better) Translates to: SEPGMLQKRVEASVP*TQRPGGSTVEIKSQ Trigger: CTGTGACTTTATCTCCACCGTACTCCCTCCTGGTCTCTGGGTTCAGGGCACACTGGCTTCCACTCGTTTCTGAAGCATTCCAGGTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 90 bp | AGCTTTCCAAAGGCTTTCCACACACAAGCTTCTGTGGTAGGAGTCTaGGGAGAGCAGGGAGCTGTTCACCGAGAGCCTTACTCTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SFPKAFHTQASVVGV*GEQGAVHREPYSAA Trigger: AGCTGCAGAGTAAGGCTCTCGGTGAACAGCTCCCTGCTCTCCTCAGACTCCTACCACAGAAGCTTGTGTGTGGAAAGCCTTTGGAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 90 bp | AAAGTATCCTCCTGTCTGAGCTACAGAGAAAGGGGCCCTGGAGGATaGAGAACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCAC | + |
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Preference number: 1 (lower is better) Translates to: KVSSCLSYRERGPGG*RTCDCPQKCTVLTH Trigger: GTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGTTCTCCATCCTCCAGGGCCCCTTTCTCTGTAGCTCAGACAGGAGGATACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | ACGAGTGGAAGCCAGTGTGCCCTGAACCCAGAGACCAGGAGGGAGTACGGTGGAGTGGTTGGGAACCACTaGGGCGAGCAGCACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TSGSQCALNPETRREYGGVVGNH*GEQHSH Trigger: GTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACCAC...TCCACCGTACTCCCTCCTGGTCTCTGGGTTCAGGGCACACTGGCTTCCACTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCTGCAGGGAGCACGACACTCTCCCTACTGGAGTaGACCTGGAATGCTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LCSSPAWVGSRQSAGSTTLSLLE*TWNASE Trigger: TTCTGAAGCATTCCAGGTTCACTCCAGTAGGGAGAG...TGTCGTGCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCTGCAGGGAGCACGACAGTGTGCAGAAGCACATaGGCATCAGTGTATAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LCSSPAWVGSRQSAGSTTVCRST*ASVYRQ Trigger: CTGTCTATACACTGATGCTCATGTGCTTCTGCACAC...TGTCGTGCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAAAGGCCGGCGAAGAAGATGTCCAGAGAGATGGCATAGCTGAACTCTCCGAAGCCAGTGTGCCCTaGACCCAGAGACCAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RRKAGEEDVQRDGIAELSEASVP*TQRPGG Trigger: CCCTCCTGGTCTCTGGGTTCAGGGCACACTGGCTTC...GGAGAGTTCAGCTATGCCATCTCTCTGGACATCTTCTTCGCCGGCCTTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CAA 90 bp | AAGCAGAAGGAGGAAGAGACAGTAATGAGTAAGGCCTGCTGGTGGTaGGGAACCACTGGGGCGAGCAGCACAGTCACGCTGTCCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KQKEEETVMSKACWW*GTTGASSTVTLSLR Trigger: TCTGAGGGACAGCGTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACCACCAGCAGGCCTTACTCATTACTGTCTCTTCCTCCTTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATGGGCTCGAGGCAGTCTaGAGGGAGCACGACAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDGLEAV*REHDRR Trigger: TCTCCTGTCGTGCTCCCTGCAGACTGCCTCGAGCCC...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAAGTAAGGCCTGCTGGTaGTTGGGAACCACTGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LARPHTRAESILLSELQRSKACW*LGTTGA Trigger: CGCCCCAGTGGTTCCCAACCACCAGCAGGCCTTACT...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATGACCTCATTGGCTGCTaGGGGCCAGGAAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDDLIGC*GPGSHR Trigger: TCTGTGGCTTCCTGGCCCTCAGCAGCCAATGAGGTC...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCACATTCCACAGCAGCTTGACCTCATTGGCTGCTaGGGGCCAGGAAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: TCDCPQKCTVLTHIPQQLDLIGC*GPGSHR Trigger: TCTGTGGCTTCCTGGCCCTCAGCAGCCAATGAGGTC...AAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTGTGGTTGGGAACCACTaGGGCGAGCAGCACAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLVVGNH*GEQHSH Trigger: GTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACCAC...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAGCGCTGGGGTGGAAGTaGAGGGAGATCAGTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LARPHTRAESILLSELQRALGWK*REISEE Trigger: CTCTTCACTGATCTCCCTCCACTTCCACCCCAGCGC...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAAAGGCCGGCGAAGAAGATGTCCAGAGAGATGGCATAGCTGAACTCTCCACAGAAGCGCTGGGGTaGAAGTGGAGGGAGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: RRKAGEEDVQRDGIAELSTEALG*KWREIS Trigger: ACTGATCTCCCTCCACTTCCACCCCAGCGCTTCTGT...GGAGAGTTCAGCTATGCCATCTCTCTGGACATCTTCTTCGCCGGCCTTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAAGGCTAAGAGTGGAGTaGCCTCATTGGCTGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LARPHTRAESILLSELQRRLRVE*PHWLLR Trigger: CCTCAGCAGCCAATGAGGTCACTCCACTCTTAGCCT...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCCTACTGGAGTGAACCTGGAATGCTTCAGAAACGAGTGGAAGCCAGTGTGGTTCAGCAGAGAGGATaGGGTCCAGGAAGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SPYWSEPGMLQKRVEASVVQQRG*GPGSRR Trigger: CCTTCTGCTTCCTGGACCCCATCCTCTCTGCTGAAC...CACACTGGCTTCCACTCGTTTCTGAAGCATTCCAGGTTCACTCCAGTAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATTCTGTGGTAGGAGTCTaGGGAGAGCAGGGAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDSVVGV*GEQGAV Trigger: AACAGCTCCCTGCTCTCCTCAGACTCCTACCACAGA...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATGTTCAGCAGAGAGGATaGGGTCCAGGAAGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDVQQRG*GPGSRR Trigger: CCTTCTGCTTCCTGGACCCCATCCTCTCTGCTGAAC...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCACATTCCACAGCAGCTTACAGAAGCGCTGGGGTaGAAGTGGAGGGAGATCAGT | + |
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Preference number: 2 (lower is better) Translates to: TCDCPQKCTVLTHIPQQLTEALG*KWREIS Trigger: ACTGATCTCCCTCCACTTCCACCCCAGCGCTTCTGT...AAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCACATTCCACAGCAGCTTAGTGAAGAGCTGAAGTaGTTCAGCAGAGAGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: TCDCPQKCTVLTHIPQQLSEELK*FSREDG Trigger: CCCATCCTCTCTGCTGAACCACTTCAGCTCTTCACT...AAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATGTGAGATCTGAGCCATaGCTCCAGGAAGTAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDVRSEP*LQEVKE Trigger: TTCCTTTACTTCCTGGAGTCATGGCTCAGATCTCAC...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGAACTCTCCCTACTaGAGTGAACCTGGAATGCTT | + |
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Preference number: 2 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLLNSPY*SEPGML Trigger: AAGCATTCCAGGTTCACTCCAGTAGGGAGAGTTCAG...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATCTGAACTCTCCCTACTaGAGTGAACCTGGAATGCTT | + |
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Preference number: 2 (lower is better) Translates to: EYSLAMGVSAQKDLASDDLNSPY*SEPGML Trigger: AAGCATTCCAGGTTCACTCCAGTAGGGAGAGTTCAG...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAGAAAGACCTTGCTTCTGATGATGTTTTTAGTTGTTTCCCCTGTGTTTGCAGGGTGGGCACAGTaGCTCCTTCCTCACCAACAA | + |
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Preference number: 2 (lower is better) Translates to: LLRKTLLLMMFLVVSPVFAGWAQ*LLPHQQ Trigger: TTGTTGGTGAGGAAGGAGGCACTGTGCCCACCCTGC...AAACACAGGGGAAACAACTAAAAACATCATCAGAAGCAAGGTCTTTCTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTGACTGTCCCCAGAAATaGACAGTGCTAACTCACATT | + |
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Preference number: 2 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLDCPQK*TVLTHI Trigger: AATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTC...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTTTAATCTTCTACATGTaGATACCTAGTGTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLLIFYM*IPSVLS Trigger: GCTGAGAACACTAGGTATCCACATGTAGAAGATTAA...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTCAGAAAGACCTTGCTTCTGATGATGTTTTTAGTTGTTTCCCCTGTGTTTTTCGAGGCTTCAGGTaGTATGTTAGAGTCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SAQKDLASDDVFSCFPCVFRGFR*YVRVLD Trigger: ATCAAGGACTCTAACATATCACCTGAAGCCTCGAAA...AACACAGGGGAAACAACTAAAAACATCATCAGAAGCAAGGTCTTTCTGAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 72 bp | CACCGAGAGCCTTACTCTGCAGCTCACCTGCGTGGGTaGGCTCGAGGCAGTCTGCAGGGAGCACGACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: HREPYSAAHLRG*ARGSLQGARQE Trigger: CTCCTGTCGTGCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAGTAAGGCTCTCGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR GCA 72 bp | CTGCAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCTaGAGGGAGCACGACAGGAGAAATCCCTGTACAGAG | + |
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Preference number: 3 (lower is better) Translates to: LQLTCVGGLEAV*REHDRRNPCTE Trigger: CTCTGTACAGGGATTTCTCCTGTCGTGCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR GCA 72 bp | AGGAGAGCAGGGAGCTGTTCACCGAGAGCCTTACTCTaGAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: RRAGSCSPRALL*SSPAWVGSRQS Trigger: AGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAGTAAGGCTCTCGGTGAACAGCTCCCTGCTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 72 bp | AAGGAGGAAGAGACAGTAATGAGTAAGGCCTGCTGGTaGTTGGGAACCACTGGGGCGAGCAGCACAGTCACG | + |
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Preference number: 3 (lower is better) Translates to: KEEETVMSKACW*LGTTGASSTVT Trigger: CGTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACCACCAGCAGGCCTTACTCATTACTGTCTCTTCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 72 bp | CAGAAGGAGGAAGAGACAGTAATGAGTAAGGCCTGCTaGTGGTTGGGAACCACTGGGGCGAGCAGCACAGTC | + |
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Preference number: 3 (lower is better) Translates to: QKEEETVMSKAC*WLGTTGASSTV Trigger: GACTGTGCTGCTCGCCCCAGTGGTTCCCAACCACCAGCAGGCCTTACTCATTACTGTCTCTTCCTCCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 72 bp | GGAATGCTTCAGAAACGAGTGGAAGCCAGTGTGCCCTaGACCCAGAGACCAGGAGGGAGTACGGTGGAGATA | + |
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Preference number: 3 (lower is better) Translates to: GMLQKRVEASVP*TQRPGGSTVEI Trigger: TATCTCCACCGTACTCCCTCCTGGTCTCTGGGTTCAGGGCACACTGGCTTCCACTCGTTTCTGAAGCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR CCA 72 bp | GGGTGGAAGTGGAGGGAGATCAGTGAAGAGCTGAAGTaGTTCAGCAGAGAGGATGGGGTCCAGGAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GWKWREISEELK*FSREDGVQEAE Trigger: TTCTGCTTCCTGGACCCCATCCTCTCTGCTGAACCACTTCAGCTCTTCACTGATCTCCCTCCACTTCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 72 bp | AAGGCTTTCCACACACAAGCTTCTGTGGTAGGAGTCTaGGGAGAGCAGGGAGCTGTTCACCGAGAGCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: KAFHTQASVVGV*GEQGAVHREPY Trigger: GTAAGGCTCTCGGTGAACAGCTCCCTGCTCTCCTCAGACTCCTACCACAGAAGCTTGTGTGTGGAAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 72 bp | CTACAGAGAAAGGGGCCCTGGAGGATGGAGAACCTGTaGCTGTCCCCAGAAATGCACAGTGCTAACTCACAT | + |
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Preference number: 3 (lower is better) Translates to: LQRKGPWRMENL*LSPEMHSANSH Trigger: ATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGTTCTCCATCCTCCAGGGCCCCTTTCTCTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 72 bp | ACTTTGAACTTGACTGATAGTCCCCAAGACCAGAGCTaGGATGGTCCCAACCTTCCTCCTGCGGGATGCACA | + |
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Preference number: 3 (lower is better) Translates to: TLNLTDSPQDQS*DGPNLPPAGCT Trigger: TGTGCATCCCGCAGGAGGAAGGTTGGGACCATCTCAGCTCTGGTCTTGGGGACTATCAGTCAAGTTCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR GCA 72 bp | CCTGGAGGATGGAGAACCTGTGACTGTCCCCAGAAATaGACAGTGCTAACTCACATTCCACAGCAGCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: PGGWRTCDCPQK*TVLTHIPQQLS Trigger: GGAAAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGTTCTCCATCCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| 3UTR TCA 72 bp | CAGAGAGATGGCATAGCTGAACTCTCCCTACTGGAGTaGACCTGGAATGCTTCAGAAACGAGTGGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QRDGIAELSLLE*TWNASETSGSQ Trigger: CTGGCTTCCACTCGTTTCTGAAGCATTCCAGGTTCACTCCAGTAGGGAGAGTTCAGCTATGCCATCTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCGAGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACTGGCGGCCTCAGCCTaGCCAGAACGCAACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GASSTVTLSLRESSAVPRLAASA*PERNRC Trigger: GCATCGGTTGCGTTCTGGTCAGGCTGAGGCCGCCAG...TCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCTCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCAGCTCACCTGCGTGGGTGGGCTCGAGGCAGTCTGCAGGGAGCACGACACTGACCACGTCTTCCTaGGCAGTAACCCTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSSPAWVGSRQSAGSTTLTTSS*AVTLLL Trigger: GAGCAGCAGGGTTACTGCCCAGGAAGACGTGGTCAG...TGTCGTGCTCCCTGCAGACTGCCTCGAGCCCACCCACGCAGGTGAGCTGCAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCGAGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGAGGTCTGTGGAGAGGCTaGGCGTGGACAATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GASSTVTLSLRESSAVPRGLWRG*AWTISR Trigger: CCTGGAGATTGTCCACGCTCAGCCTCTCCACAGACC...TCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCTCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGGGTGGTGAGAGGCAGTaGGGAAGCAACGGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVTLSLRESSAVPRPWGGERQ*GSNGGH Trigger: ATGCCCACCGTTGCTTCCCCACTGCCTCTCACCACC...CCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGCGAGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGCAAGGTCATTCATGCTaGCCACGTCTTCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WGEQHSHAVPQREQCCSQQGHSC*PRLPGQ Trigger: CTGCCCAGGAAGACGTGGTCAGCATGAATGACCTTG...CTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCTCGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAGGCGGAAGCGGTGACTaGAGAAGGCGTAGAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPGGSGD*RRRRGP Trigger: CGGTCCTCTACGCCTTCTGCAGTCACCGCTTCCGCC...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGTGGAAGCCAGTGTGCCCTGAACCCAGAGACCAGGAGGGAGTACGGTGGAGGGGTGCCAGGTGCCTaGTGCCATCTCAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSGSQCALNPETRREYGGGVPGA*CHLNIT Trigger: TGTGATGTTGAGATGGCACCAGGCACCTGGCACCCC...TCCACCGTACTCCCTCCTGGTCTCTGGGTTCAGGGCACACTGGCTTCCACTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAGGTCTGTGGAGAGGCTaGGCGTGGACAATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPGLWRG*AWTISR Trigger: CCTGGAGATTGTCCACGCTCAGCCTCTCCACAGACC...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGAACCACTGGGGCGAGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAAGTCGTAGTCGTAGATaGAGCTGCTGTTCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWEPLGRAAQSRCPSERASRSRR*SCCSRN Trigger: GTTCCGAGAACAGCAGCTCCATCTACGACTACGACT...TGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGCCTACAAACAAGAGGTTaGAGACGGCCAGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQSRCPSERAVLFPDRGLQTRG*RRPGSA Trigger: TGCTGAACCTGGCCGTCTCCAACCTCTTGTTTGTAG...GCCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGCCACAAAGACCATTTCTaGGACAGAGATGGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAQSRCPSERAVLFPDRGHKDHF*DRDGQG Trigger: TCCCTGGCCATCTCTGTCCCAGAAATGGTCTTTGTG...GCCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGGATCATGGCCAAGAGTaGGAGGAGAAACCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVTLSLRESSAVPRPWDHGQE*EEKPQK Trigger: CTTCTGGGGTTTCTCCTCCCACTCTTGGCCATGATC...CCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAGGGGTGCCAGGTGCCTaGTGCCATCTCAACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPGVPGA*CHLNIT Trigger: TGTGATGTTGAGATGGCACCAGGCACCTGGCACCCC...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGAACCACTGGGGCGAGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAAGGTCCAGCAACGAGTaGAGAAACAAGGTGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GWEPLGRAAQSRCPSERARSSNE*RNKVRL Trigger: TAACCTCACCTTGTTTCTGCACTCGTTGCTGGACCT...TGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCTCGCCCCAGTGGTTCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAGGCGGAAGCGGTGACTaGAGAAGGCGTAGAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRGGSGD*RRRRGP Trigger: CGGTCCTCTACGCCTTCTGCAGTCACCGCTTCCGCC...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAAGGGAGTCCTCAGACTaGCTCTCCCCAAGGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPRESSD*LSPRSF Trigger: GAATGACCTTGGGGAGAGGCAGTCTGAGGACTCCCT...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTAAGAGTGGAGTGACCTCATTGGCTGCTGAGGGCCAGGAAGCCACAGAACTGACCACGTCTTCCTaGGCAGTAACCCTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAKSGVTSLAAEGQEATELTTSS*AVTLLL Trigger: GAGCAGCAGGGTTACTGCCCAGGAAGACGTGGTCAG...TTCTGTGGCTTCCTGGCCCTCAGCAGCCAATGAGGTCACTCCACTCTTAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATCGGAACCGACGGTGGTaGGAGGCAGTGGGGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EYSLAMGVSAQKDLASDDRNRRW*EAVGKQ Trigger: TTGCTTCCCCACTGCCTCTCACCACCGTCGGTTCCG...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGATGGGAACCACAGCATaGAGAAAACTATCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVTLSLRESSAVPRPWMGTTA*RKLSPG Trigger: CCCTGGTGATAGTTTTCTTCATGCTGTGGTTCCCAT...CCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGGGTACAGCTTCCAAATaGTCGCATGTCCGCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVTLSLRESSAVPRPWGTASK*SHVRQN Trigger: ATTTTGGCGGACATGCGACCATTTGGAAGCTGTACC...CCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| 3UTR CAA 72 bp | GCAGAAGCACATGAGCATCAGTGTATAGACAGGGCATaGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AEAHEHQCIDRA*SRVGTVPPSSP Trigger: TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTGATGCTCATGTGCTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAGGAAGGGGTGCCAGGTaGCTGGTGCCATCTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRGRGAR*LVPSQH Trigger: ATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCC...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATGGTGGTGAGAGGCAGTaGGGAAGCAACGGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EYSLAMGVSAQKDLASDDGGERQ*GSNGGH Trigger: ATGCCCACCGTTGCTTCCCCACTGCCTCTCACCACC...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAAGTCGTAGTCGTAGATaGAGCTGCTGTTCTCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPSRSRR*SCCSRN Trigger: GTTCCGAGAACAGCAGCTCCATCTACGACTACGACT...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAAGGTCTGAAGGCTAAGAGTGGAGTGACCTCATTGGCTGCTGAGGGCCACAAAGACCATTTCTaGGACAGAGATGGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALEGLKAKSGVTSLAAEGHKDHF*DRDGQG Trigger: TCCCTGGCCATCTCTGTCCCAGAAATGGTCTTTGTG...GCCCTCAGCAGCCAATGAGGTCACTCCACTCTTAGCCTTCAGACCTTCAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGCCATCTAAGGTCTGGTaGATCTGCACAAAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVTLSLRESSAVPRPWPSKVW*ICTKTI Trigger: AATGGTCTTTGTGCAGATCCACCAGACCTTAGATGG...CCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTGGAAGGGGTGCCAGGTaGCTGGTGCCATCTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLGRGAR*LVPSQH Trigger: ATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCC...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAGATCATGGCCAAGAGTaGGAGGAGAAACCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRDHGQE*EEKPQK Trigger: CTTCTGGGGTTTCTCCTCCCACTCTTGGCCATGATC...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGAAAGGCCGGCGAAGAAGATGTCCAGAGAGATGGCATAGCTGAACTCTCCGGACCTCGTCCTTCCTaGAAACCAAGATGGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RRKAGEEDVQRDGIAELSGPRPS*KPRWSY Trigger: ATATGACCATCTTGGTTTGCAGGAAGGACGAGGTCC...GGAGAGTTCAGCTATGCCATCTCTCTGGACATCTTCTTCGCCGGCCTTTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGAAAGACCTTGCTTCTGATGATGTTTTTAGTTGTTTCCCCTGTGTTTCGGAACCGACGGTGGTaGGAGGCAGTGGGGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRKTLLLMMFLVVSPVFRNRRW*EAVGKQ Trigger: TTGCTTCCCCACTGCCTCTCACCACCGTCGGTTCCG...AAACACAGGGGAAACAACTAAAAACATCATCAGAAGCAAGGTCTTTCTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCCTACTGGAGTGAACCTGGAATGCTTCAGAAACGAGTGGAAGCCAGTGTGATGGGAACCACAGCATaGAGAAAACTATCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPYWSEPGMLQKRVEASVMGTTA*RKLSPG Trigger: CCCTGGTGATAGTTTTCTTCATGCTGTGGTTCCCAT...CACACTGGCTTCCACTCGTTTCTGAAGCATTCCAGGTTCACTCCAGTAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAGAGTGCTTATCACCTTaGACAGGAAACTACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QCIDRALSRVGTVPPSSPECLSP*TGNYQK Trigger: TTTTTGGTAGTTTCCTGTGCAAGGTGATAAGCACTC...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAAGGTCCAGCAACGAGTaGAGAAACAAGGTGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRRSSNE*RNKVRL Trigger: TAACCTCACCTTGTTTCTGCACTCGTTGCTGGACCT...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATCTACAAACAAGAGGTTaGAGACGGCCAGGTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EYSLAMGVSAQKDLASDDLQTRG*RRPGSA Trigger: TGCTGAACCTGGCCGTCTCCAACCTCTTGTTTGTAG...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGAGGTACAGCTTCCAAATaGTCGCATGTCCGCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRGTASK*SHVRQN Trigger: ATTTTGGCGGACATGCGACCATTTGGAAGCTGTACC...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATCTGAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTAAGGTCTGGTGGATCTaGACAAAGACCATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDLSIPWLWGSLLRKTLLKVWWI*TKTISG Trigger: CCCAGAAATGGTCTTTGTGCAGATCCACCAGACCTT...AAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTCAGATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGACCATCTAAGGTCTGGTaGATCTGCACAAAGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRPSKVW*ICTKTI Trigger: AATGGTCTTTGTGCAGATCCACCAGACCTTAGATGG...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | GAGTATTCCCTGGCTATGGGGGTCTCTGCTCAGAAAGACCTTGCTTCTGATGATAGTGCAGAAACAAGGTaGGGTTATATGGGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: EYSLAMGVSAQKDLASDDSAETR*GYMGTT Trigger: TGTGGTTCCCATATAACCTCACCTTGTTTCTGCACT...ATCATCAGAAGCAAGGTCTTTCTGAGCAGAGACCCCCATAGCCAGGGAATACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCAGAAAGACCTTGCTTCTGATGATGTTTTTAGTTGTTTCCCCTGTGTTTCAAGGTCATTCATGCTaGCCACGTCTTCCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKTLLLMMFLVVSPVFQGHSC*PRLPGQ Trigger: CTGCCCAGGAAGACGTGGTCAGCATGAATGACCTTG...AAACACAGGGGAAACAACTAAAAACATCATCAGAAGCAAGGTCTTTCTGAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCACATTCCACAGCAGCTTGAGTGCTTATCACCTTaGACAGGAAACTACCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCDCPQKCTVLTHIPQQLECLSP*TGNYQK Trigger: TTTTTGGTAGTTTCCTGTGCAAGGTGATAAGCACTC...AAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGACCTCACACAAGGGCAGAAAGTATCCTCCTGTCTGAGCTACAGAGATCCTGCAAACCAAGATaGTCATATCATCTAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LARPHTRAESILLSELQRSCKPR*SYHLSS Trigger: ACTACTTAGATGATATGACCATCTTGGTTTGCAGGA...TCTCTGTAGCTCAGACAGGAGGATACTTTCTGCCCTTGTGTGAGGTCTAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGAAAGACCTTGCTTCTGATGATGTTTTTAGTTGTTTCCCCTGTGTTTGGACCTCGTCCTTCCTaGAAACCAAGATGGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRKTLLLMMFLVVSPVFGPRPS*KPRWSY Trigger: ATATGACCATCTTGGTTTGCAGGAAGGACGAGGTCC...AAACACAGGGGAAACAACTAAAAACATCATCAGAAGCAAGGTCTTTCTGAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
||
| CDS CCA 90 bp | AAGAAAACTATCACCAGGGCCGCGGCCATCCTCAGAGCCCGGCCCTaGCCTGGCGGCCTCAGCCTGACCAGAACGCAACCGATGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKTITRAAAILRARP*PGGLSLTRTQPMRE Trigger: CTCCCGCATCGGTTGCGTTCTGGTCAGGCTGAGGCCGCCAGGCCAGGGCCGGGCTCTGAGGATGGCCGCGGCCCTGGTGATAGTTTTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS-3UTR CAA 90 bp | GCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGCTTCCCCATCTCCCCCTaGTTAAGGGAGTCCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: AAQSRCPSERAVLFPDRGFPISP*LRESSD Trigger: GTCTGAGGACTCCCTTAACAAGGGGGAGATGGGGAA...GCCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 90 bp | AGGGGTGCCAGGTGCCTGGTGCCATCTCAACATCACAGACAGAAATaGCTTCAGGTACCGGCGGAAGCGGTGACTGCAGAAGGCGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: RGARCLVPSQHHRQK*LQVPAEAVTAEGVE Trigger: CTCTACGCCTTCTGCAGTCACCGCTTCCGCCGGTACCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS-3UTR CAA 90 bp | GCAGCACAGTCACGCTGTCCCTCAGAGAGAGCAGTGCTGTTCCCAGACCGTGGCACTACAAACAAGAGGTaGGAGACGGCCAGGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: AAQSRCPSERAVLFPDRGTTNKR*ETARFS Trigger: GCTGAACCTGGCCGTCTCCAACCTCTTGTTTGTAGT...GCCACGGTCTGGGAACAGCACTGCTCTCTCTGAGGGACAGCGTGACTGTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 90 bp | CTGCTGCTCTCAGAATGGTTAGAGGAAGGGGTGCCAGGTGCCTGGTaGCATCTCAACATCACAGACAGAAATGCCTTCAGGTACCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLLSEWLEEGVPGAW*HLNITDRNAFRYRR Trigger: CCGCCGGTACCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGAGAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS TCA 90 bp | ATGAGAAGCAGGTTCCTGAACTGGGCCTTCGGTCTGTGGAGAGGCTaGGCGTGGACAATCTCCAGGTATTTGTCCAGGCTCATGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: MRSRFLNWAFGLWRG*AWTISRYLSRLMQV Trigger: CACCTGCATGAGCCTGGACAAATACCTGGAGATTGTCCACGCTCAGCCTCTCCACAGACCGAAGGCCCAGTTCAGGAACCTGCTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS TCA 90 bp | AGGCCAGGCTCTCTGTCACCTGCAACGTATAGTCCAGACGGTGGCTaGTCTCACAGTTCCCAAAGACATGCAGGTCCAGCAACGAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: RPGSLSPATYSPDGG*SHSSQRHAGPATSA Trigger: TGCACTCGTTGCTGGACCTGCATGTCTTTGGGAACTGTGAGATCAGCCACCGTCTGGACTATACGTTGCAGGTGACAGAGAGCCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | ACCCTGCTGCTCTCAGAATGGTTAGAGGAAGGGGTGCCAGGTGCCTaGTGCCATCTCAACATCACAGACAGAAATGCCTTCAGGTACCGG | + |
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Preference number: 5 (lower is better) Translates to: TLLLSEWLEEGVPGA*CHLNITDRNAFRYR Trigger: CCGGTACCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGAGAGCAGCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | TCAGACTGCCTCTCCCCAAGGTCATTCATGCTGACCACGTCTTCCTaGGCAGTAACCCTGCTGCTCTCAGAATGGTTAGAGGAAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SDCLSPRSFMLTTSS*AVTLLLSEWLEEGV Trigger: CACCCCTTCCTCTAACCATTCTGAGAGCAGCAGGGTTACTGCCCAGGAAGACGTGGTCAGCATGAATGACCTTGGGGAGAGGCAGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | GAAACCCCAGAAGGTTCAGCTGGAAGCGCAGGTACAGCTTCCAAATaGTCGCATGTCCGCCAAAATCCGCATAGCAGTGCCACACACCAT | + |
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Preference number: 5 (lower is better) Translates to: ETPEGSAGSAGTASK*SHVRQNPHSSATHH Trigger: ATGGTGTGTGGCACTGCTATGCGGATTTTGGCGGACATGCGACCATTTGGAAGCTGTACCTGCGCTTCCAGCTGAACCTTCTGGGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | CAGAACGCAACCGATGCGGGAGTAAAAGAAGATCATGGCCAAGAGTaGGAGGAGAAACCCCAGAAGGTTCAGCTGGAAGCGCAGGTACAG | + |
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Preference number: 5 (lower is better) Translates to: QNATDAGVKEDHGQE*EEKPQKVQLEAQVQ Trigger: CTGTACCTGCGCTTCCAGCTGAACCTTCTGGGGTTTCTCCTCCCACTCTTGGCCATGATCTTCTTTTACTCCCGCATCGGTTGCGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTATAGACAGGGCATTGAGCAGGGTGGGCACAGTGCCTCCTTCCTCACCAACAATCTCCAGGTATTaGTCCAGGCTCATGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: QCIDRALSRVGTVPPSSPTISRY*SRLMQV Trigger: CACCTGCATGAGCCTGGACAAATACCTGGAGATTGT...TGGTGAGGAAGGAGGCACTGTGCCCACCCTGCTCAATGCCCTGTCTATACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | AAGATCATGGCCAAGAGTGGGAGGAGAAACCCCAGAAGGTTCAGCTaGAAGCGCAGGTACAGCTTCCAAATGGTCGCATGTCCGCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: KIMAKSGRRNPRRFS*KRRYSFQMVACPPK Trigger: TTTTGGCGGACATGCGACCATTTGGAAGCTGTACCTGCGCTTCCAGCTGAACCTTCTGGGGTTTCTCCTCCCACTCTTGGCCATGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS-3UTR CAA 90 bp | AGGAGAAAGGCCGGCGAAGAAGATGTCCAGAGAGATGGCATAGCTGAACTCTCCACTACAAACAAGAGGTaGGAGACGGCCAGGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRKAGEEDVQRDGIAELSTTNKR*ETARFS Trigger: GCTGAACCTGGCCGTCTCCAACCTCTTGTTTGTAGT...GGAGAGTTCAGCTATGCCATCTCTCTGGACATCTTCTTCGCCGGCCTTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 90 bp | AGTAACCCTGCTGCTCTCAGAATGGTTAGAGGAAGGGGTGCCAGGTaGCTGGTGCCATCTCAACATCACAGACAGAAATGCCTTCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: SNPAALRMVRGRGAR*LVPSQHHRQKCLQV Trigger: TACCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGAGAGCAGCAGGGTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | GACATGCAGGTCCAGCAACGAGTGCAGAAACAAGGTGAGGTTATATaGGAACCACAGCATGAAGAAAACTATCACCAGGGCCGCGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: DMQVQQRVQKQGEVI*EPQHEENYHQGRGH Trigger: ATGGCCGCGGCCCTGGTGATAGTTTTCTTCATGCTGTGGTTCCCATATAACCTCACCTTGTTTCTGCACTCGTTGCTGGACCTGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS-3UTR CAA 90 bp | ACCTGTGACTGTCCCCAGAAATGCACAGTGCTAACTCACATTCCACAGCAGCTTACAATCTCCAGGTATTaGTCCAGGCTCATGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: TCDCPQKCTVLTHIPQQLTISRY*SRLMQV Trigger: CACCTGCATGAGCCTGGACAAATACCTGGAGATTGT...AAGCTGCTGTGGAATGTGAGTTAGCACTGTGCATTTCTGGGGACAGTCACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 90 bp | TGGCTGATCTCACAGTTCCCAAAGACATGCAGGTCCAGCAACGAGTaGAGAAACAAGGTGAGGTTATATGGGAACCACAGCATGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: WLISQFPKTCRSSNE*RNKVRLYGNHSMKK Trigger: TTTCTTCATGCTGTGGTTCCCATATAACCTCACCTTGTTTCTGCACTCGTTGCTGGACCTGCATGTCTTTGGGAACTGTGAGATCAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 90 bp | AGACTCTTCCAAAGGACAGGACCTCGTCCTTCCTGCAAACCAAGATaGTCATATCATCTAAGTAGTCGTAGTCGTAGATGGAGCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RLFQRTGPRPSCKPR*SYHLSSRSRRWSCC Trigger: ACAGCAGCTCCATCTACGACTACGACTACTTAGATGATATGACCATCTTGGTTTGCAGGAAGGACGAGGTCCTGTCCTTTGGAAGAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 ENSMUST00000216326.2 |
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| CDS CCA 72 bp | ATCACCAGGGCCGCGGCCATCCTCAGAGCCCGGCCCTaGCCTGGCGGCCTCAGCCTGACCAGAACGCAACCG | + |
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Preference number: 6 (lower is better) Translates to: ITRAAAILRARP*PGGLSLTRTQP Trigger: CGGTTGCGTTCTGGTCAGGCTGAGGCCGCCAGGCCAGGGCCGGGCTCTGAGGATGGCCGCGGCCCTGGTGAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS TCA 72 bp | AGGTTCCTGAACTGGGCCTTCGGTCTGTGGAGAGGCTaGGCGTGGACAATCTCCAGGTATTTGTCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RFLNWAFGLWRG*AWTISRYLSRL Trigger: GAGCCTGGACAAATACCTGGAGATTGTCCACGCTCAGCCTCTCCACAGACCGAAGGCCCAGTTCAGGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 72 bp | AGGTGCCTGGTGCCATCTCAACATCACAGACAGAAATaGCTTCAGGTACCGGCGGAAGCGGTGACTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RCLVPSQHHRQK*LQVPAEAVTAE Trigger: TTCTGCAGTCACCGCTTCCGCCGGTACCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 72 bp | GAAGGTTCAGCTGGAAGCGCAGGTACAGCTTCCAAATaGTCGCATGTCCGCCAAAATCCGCATAGCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: EGSAGSAGTASK*SHVRQNPHSSA Trigger: GGCACTGCTATGCGGATTTTGGCGGACATGCGACCATTTGGAAGCTGTACCTGCGCTTCCAGCTGAACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 72 bp | GCCAAGAGTGGGAGGAGAAACCCCAGAAGGTTCAGCTaGAAGCGCAGGTACAGCTTCCAAATGGTCGCATGT | + |
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Preference number: 6 (lower is better) Translates to: AKSGRRNPRRFS*KRRYSFQMVAC Trigger: ACATGCGACCATTTGGAAGCTGTACCTGCGCTTCCAGCTGAACCTTCTGGGGTTTCTCCTCCCACTCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 72 bp | GCTGCTCTCAGAATGGTTAGAGGAAGGGGTGCCAGGTaGCTGGTGCCATCTCAACATCACAGACAGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: AALRMVRGRGAR*LVPSQHHRQKC Trigger: GCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGAGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 72 bp | TCAGAATGGTTAGAGGAAGGGGTGCCAGGTGCCTGGTaGCATCTCAACATCACAGACAGAAATGCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SEWLEEGVPGAW*HLNITDRNAFR Trigger: CCTGAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS CCA 72 bp | CTCTCAGAATGGTTAGAGGAAGGGGTGCCAGGTGCCTaGTGCCATCTCAACATCACAGACAGAAATGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSEWLEEGVPGA*CHLNITDRNAF Trigger: GAAGGCATTTCTGTCTGTGATGTTGAGATGGCACCAGGCACCTGGCACCCCTTCCTCTAACCATTCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 |
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| CDS GCA 72 bp | GAAAGACTCTTCCAAAGGACAGGACCTCGTCCTTCCTaGAAACCAAGATGGTCATATCATCTAAGTAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: ERLFQRTGPRPS*KPRWSYHLSSR Trigger: ACGACTACTTAGATGATATGACCATCTTGGTTTGCAGGAAGGACGAGGTCCTGTCCTTTGGAAGAGTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050327.5 ENSMUST00000214340.2 ENSMUST00000216326.2 |
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