Pregenerated sensors for ACKR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037872Ensembl transcript IDs: ENSMUST00000038227.6, ENSMUST00000194046.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAAGGATCTACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTaGGGTAGCCACACAGTGCAGCATACTCAGGGCTTCTGTCACATT | + |
Preference number: 1 (lower is better) Translates to: QGSTGGLMAEQGQEQ*GSHTVQHTQGFCHI Trigger: AATGTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGTAGATCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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3UTR-3UTR CCA 90 bp | CAGAACAGGGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTAGAATCTTCTGGGATTaGCATGTATACAGAAGAACA | + |
Preference number: 2 (lower is better) Translates to: QNRARSSGVATQCSILRARIFWD*HVYRRT Trigger: TGTTCTTCTGTATACATGCCAATCCCAGAAGATTCT...AGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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3UTR CCA 72 bp | ACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTaGGGTAGCCACACAGTGCAGCATACTCAGGGCTTC | + |
Preference number: 3 (lower is better) Translates to: TGGLMAEQGQEQ*GSHTVQHTQGF Trigger: GAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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3UTR TCA 72 bp | ATCCATTTGAGAAGCCTGTCTTGTAGGGAGGGAGAGTaGGGACAAGGATCTACGGGTGGTCTGATGGCAGAA | + |
Preference number: 3 (lower is better) Translates to: IHLRSLSCREGE*GQGSTGGLMAE Trigger: TTCTGCCATCAGACCACCCGTAGATCCTTGTCCTCACTCTCCCTCCCTACAAGACAGGCTTCTCAAATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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3UTR TCA 72 bp | GACCTCACCAAAGCATCAAATATGAGAACCATCCCATaGGGCCACCAGAAAATGAACCAGATCCACAAGACA | + |
Preference number: 3 (lower is better) Translates to: DLTKASNMRTIP*GHQKMNQIHKT Trigger: TGTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTTGATGCTTTGGTGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR CCA 90 bp | GGACAAGGATCTACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTGGGGTGTAGCAGGGAGCAGCTaGTGTCAGGCTGTAGTCACT | + |
Preference number: 4 (lower is better) Translates to: GQGSTGGLMAEQGQEQWGVAGSS*CQAVVT Trigger: AGTGACTACAGCCTGACACCAGCTGCTCCCTGCTAC...ACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGTAGATCCTTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR CCA 90 bp | GGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTTCTGTCACCTATCTTCAGCCCCTTaGCTGCCAAAAGAGTCGGTG | + |
Preference number: 4 (lower is better) Translates to: GQEQWGSHTVQHTQGFCHLSSAP*LPKESV Trigger: CACCGACTCTTTTGGCAGCCAAGGGGCTGAAGATAG...GTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR CCA 90 bp | AAATATGAGAACCATCCCATGAGGCCACCAGAAAATGAACCAGATCCACAAGACCATAGGGCTGTGCTGTaGGCGCTGTGTAAGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: KYENHPMRPPENEPDPQDHRAVL*ALCKPG Trigger: ACCAGGCTTACACAGCGCCCACAGCACAGCCCTATG...GTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR TCA 90 bp | TCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTG | + |
Preference number: 4 (lower is better) Translates to: SGIGMYTEEQFWTSPKHQWALQC*TGHCPL Trigger: CAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCA...TTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR GCA 90 bp | TCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAACAGCTGGGGCAAATCTaGCAGTGGAAGAAAGGTCTG | + |
Preference number: 4 (lower is better) Translates to: SGIGMYTEEQFWTSPKHQQLGQI*QWKKGL Trigger: CAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTG...TTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR GCA 90 bp | ATCAAGAATCTTCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACAGGGAAGGGAAGACCTaGCAAGCAGATTACAGGAGT | + |
Preference number: 4 (lower is better) Translates to: IKNLLGLACIQKNNFGPHREGKT*QADYRS Trigger: ACTCCTGTAATCTGCTTGGCAGGTCTTCCCTTCCCT...GTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGAAGATTCTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR CCA 90 bp | GGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATCTAACTCTGCCAGAATaGGCCAGCTGGGGCAAATCT | + |
Preference number: 4 (lower is better) Translates to: GLACIQKNNFGPHQSIKYLTLPE*ASWGKS Trigger: AGATTTGCCCCAGCTGGCCCATTCTGGCAGAGTTAG...ATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR TCA 90 bp | GATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATGAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGC | + |
Preference number: 4 (lower is better) Translates to: DWHVYRRTILDLTKASNMSGRKV*ESRRGC Trigger: GCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACT...CATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR CCA 90 bp | GATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATGGGGCAAATCTGCCAGTaGAAGAAAGGTCTGAGAATC | + |
Preference number: 4 (lower is better) Translates to: DWHVYRRTILDLTKASNMGQICQ*KKGLRI Trigger: GATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCC...CATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS-3UTR TCA 90 bp | GGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATACTGTCGAAAGTAAACTaGGTTCCATTCTTGTCTAGT | + |
Preference number: 4 (lower is better) Translates to: GIGMYTEEQFWTSPKHQILSKVN*VPFLSS Trigger: ACTAGACAAGAATGGAACTCAGTTTACTTTCGACAG...TATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS TCA 90 bp | TGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTGCTAACTCTGCCAGAATGGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: CGRCVSLVPGWALQC*TGHCPLLTLPEWAS Trigger: GCTGGCCCATTCTGGCAGAGTTAGCAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCATCCTGGCACCAGGCTTACACAGCGCCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS TCA 90 bp | CCAGAATGGGCCAGCTGGGGCAAATCTGCCAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGCCGCCACTTGCCAGCATGCCCAGGA | + |
Preference number: 5 (lower is better) Translates to: PEWASWGKSASGRKV*ESRRGCRHLPACPG Trigger: TCCTGGGCATGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGCCCATTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS-3UTR CAA 90 bp | CAGAACAGGGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTGCTATCTTCAGCCCCTaGGCTGCCAAAAGAGTCGGT | + |
Preference number: 5 (lower is better) Translates to: QNRARSSGVATQCSILRAAIFSP*AAKRVG Trigger: ACCGACTCTTTTGGCAGCCAAGGGGCTGAAGATAGC...AGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS GCA 90 bp | AAGCAGAAGTATACCATACCCAGTAGCCCAGGTTGCATAGGGCTGTaGTGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGGGCACTGCAA | + |
Preference number: 5 (lower is better) Translates to: KQKYTIPSSPGCIGL*CGRCVSLVPGWALQ Trigger: TTGCAGTGCCCATCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS GCA 90 bp | GAGCTTGGGCAAAAGCAGAAGTATACCATACCCAGTAGCCCAGGTTaGATAGGGCTGTGCTGTGGGCGCTGTGTAAGCCTGGTGCCAGGA | + |
Preference number: 5 (lower is better) Translates to: ELGQKQKYTIPSSPG*IGLCCGRCVSLVPG Trigger: TCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTTTTGCCCAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS-3UTR CAA 90 bp | AAATATGAGAACCATCCCATGAGGCCACCAGAAAATGAACCAGATCCACAAGACAGAGGATGCCGCCACTaGCCAGCATGCCCAGGACAC | + |
Preference number: 5 (lower is better) Translates to: KYENHPMRPPENEPDPQDRGCRH*PACPGH Trigger: GTGTCCTGGGCATGCTGGCAAGTGGCGGCATCCTCT...GTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194046.2 |
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CDS TCA 90 bp | ACAATTTTGGACCTCACCAAAGCATCAAATATGAGAACCATCCCATaGGGCCACCAGAAAATGAACCAGATCCACAAGACACTAACCCAG | + |
Preference number: 5 (lower is better) Translates to: TILDLTKASNMRTIP*GHQKMNQIHKTLTQ Trigger: CTGGGTTAGTGTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTTGATGCTTTGGTGAGGTCCAAAATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS TCA 72 bp | GCCAGCTGGGGCAAATCTGCCAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGCCGCCACTTGCCAGCA | + |
Preference number: 6 (lower is better) Translates to: ASWGKSASGRKV*ESRRGCRHLPA Trigger: TGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS GCA 72 bp | TATACCATACCCAGTAGCCCAGGTTGCATAGGGCTGTaGTGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGG | + |
Preference number: 6 (lower is better) Translates to: YTIPSSPGCIGL*CGRCVSLVPGW Trigger: CCATCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS TCA 72 bp | TGTGTAAGCCTGGTGCCAGGATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTGCTAACTCTGCCAGAA | + |
Preference number: 6 (lower is better) Translates to: CVSLVPGWALQC*TGHCPLLTLPE Trigger: TTCTGGCAGAGTTAGCAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCATCCTGGCACCAGGCTTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS GCA 72 bp | GAAAGGTCTGAGAATCGCGAAGAGGATGCCGCCACTTaGCAGCATGCCCAGGACACTGGTGAGCATGAAGAA | + |
Preference number: 6 (lower is better) Translates to: ERSENREEDAAT*QHAQDTGEHEE Trigger: TTCTTCATGCTCACCAGTGTCCTGGGCATGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS GCA 72 bp | GCTAACTCTGCCAGAATGGGCCAGCTGGGGCAAATCTaGCAGTGGAAGAAAGGTCTGAGAATCGCGAAGAGG | + |
Preference number: 6 (lower is better) Translates to: ANSARMGQLGQI*QWKKGLRIAKR Trigger: CCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGCCCATTCTGGCAGAGTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038227.6 ENSMUST00000194046.2 |
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CDS GCA 72 bp | CAAAAGCAGAAGTATACCATACCCAGTAGCCCAGGTTaGATAGGGCTGTGCTGTGGGCGCTGTGTAAGCCTG | + |
Preference number: 6 (lower is better) Translates to: QKQKYTIPSSPG*IGLCCGRCVSL Trigger: CAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS CAA 90 bp | TGCTCCCCAAAGTCCCACACTGAGTCCCAAGGTGAAGCCACGGAGTaGACCAATATTCAGTCTGGGGTTCAGGCAAGCATAGCATCCTAT | + |
Preference number: 6 (lower is better) Translates to: CSPKSHTESQGEATE*TNIQSGVQASIASY Trigger: ATAGGATGCTATGCTTGCCTGAACCCCAGACTGAATATTGGTCAACTCCGTGGCTTCACCTTGGGACTCAGTGTGGGACTTTGGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS CAA 72 bp | GGGGTTCAGGCAAGCATAGCATCCTATCAACAGAGCTaGGGCAAAAGCAGAAGTATACCATACCCAGTAGCC | + |
Preference number: 6 (lower is better) Translates to: GVQASIASYQQS*GKSRSIPYPVA Trigger: GGCTACTGGGTATGGTATACTTCTGCTTTTGCCCAAGCTCTGTTGATAGGATGCTATGCTTGCCTGAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS CCA 72 bp | ATGCATGTACTTCAAAGCTTCCATGTCTCTGGAGGATaGAAAGGCGCAGAAGCCATTGTAAGCATCACTGGC | + |
Preference number: 6 (lower is better) Translates to: MHVLQSFHVSGG*KGAEAIVSITG Trigger: GCCAGTGATGCTTACAATGGCTTCTGCGCCTTTCCATCCTCCAGAGACATGGAAGCTTTGAAGTACATGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |
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CDS CCA 72 bp | TGGCATAATGCATGTACTTCAAAGCTTCCATGTCTCTaGAGGATGGAAAGGCGCAGAAGCCATTGTAAGCAT | + |
Preference number: 6 (lower is better) Translates to: WHNACTSKLPCL*RMERRRSHCKH Trigger: ATGCTTACAATGGCTTCTGCGCCTTTCCATCCTCCAGAGACATGGAAGCTTTGAAGTACATGCATTATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038227.6 |