RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACKR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037872

Ensembl transcript IDs: ENSMUST00000038227.6, ENSMUST00000194046.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGGATCTACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTaGGGTAGCCACACAGTGCAGCATACTCAGGGCTTCTGTCACATT +
Preference number: 1 (lower is better)
Translates to: QGSTGGLMAEQGQEQ*GSHTVQHTQGFCHI
Trigger: AATGTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGTAGATCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
3UTR-3UTR CCA 90 bp CAGAACAGGGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTAGAATCTTCTGGGATTaGCATGTATACAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: QNRARSSGVATQCSILRARIFWD*HVYRRT
Trigger: TGTTCTTCTGTATACATGCCAATCCCAGAAGATTCT...AGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
3UTR CCA 72 bp ACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTaGGGTAGCCACACAGTGCAGCATACTCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: TGGLMAEQGQEQ*GSHTVQHTQGF
Trigger: GAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
3UTR TCA 72 bp ATCCATTTGAGAAGCCTGTCTTGTAGGGAGGGAGAGTaGGGACAAGGATCTACGGGTGGTCTGATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: IHLRSLSCREGE*GQGSTGGLMAE
Trigger: TTCTGCCATCAGACCACCCGTAGATCCTTGTCCTCACTCTCCCTCCCTACAAGACAGGCTTCTCAAATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
3UTR TCA 72 bp GACCTCACCAAAGCATCAAATATGAGAACCATCCCATaGGGCCACCAGAAAATGAACCAGATCCACAAGACA +
Preference number: 3 (lower is better)
Translates to: DLTKASNMRTIP*GHQKMNQIHKT
Trigger: TGTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTTGATGCTTTGGTGAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR CCA 90 bp GGACAAGGATCTACGGGTGGTCTGATGGCAGAACAGGGCCAGGAGCAGTGGGGTGTAGCAGGGAGCAGCTaGTGTCAGGCTGTAGTCACT +
Preference number: 4 (lower is better)
Translates to: GQGSTGGLMAEQGQEQWGVAGSS*CQAVVT
Trigger: AGTGACTACAGCCTGACACCAGCTGCTCCCTGCTAC...ACCCCACTGCTCCTGGCCCTGTTCTGCCATCAGACCACCCGTAGATCCTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR CCA 90 bp GGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTTCTGTCACCTATCTTCAGCCCCTTaGCTGCCAAAAGAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: GQEQWGSHTVQHTQGFCHLSSAP*LPKESV
Trigger: CACCGACTCTTTTGGCAGCCAAGGGGCTGAAGATAG...GTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR CCA 90 bp AAATATGAGAACCATCCCATGAGGCCACCAGAAAATGAACCAGATCCACAAGACCATAGGGCTGTGCTGTaGGCGCTGTGTAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KYENHPMRPPENEPDPQDHRAVL*ALCKPG
Trigger: ACCAGGCTTACACAGCGCCCACAGCACAGCCCTATG...GTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR TCA 90 bp TCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SGIGMYTEEQFWTSPKHQWALQC*TGHCPL
Trigger: CAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCA...TTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR GCA 90 bp TCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAACAGCTGGGGCAAATCTaGCAGTGGAAGAAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGIGMYTEEQFWTSPKHQQLGQI*QWKKGL
Trigger: CAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTG...TTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR GCA 90 bp ATCAAGAATCTTCTGGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACAGGGAAGGGAAGACCTaGCAAGCAGATTACAGGAGT +
Preference number: 4 (lower is better)
Translates to: IKNLLGLACIQKNNFGPHREGKT*QADYRS
Trigger: ACTCCTGTAATCTGCTTGGCAGGTCTTCCCTTCCCT...GTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCCAGAAGATTCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR CCA 90 bp GGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATCTAACTCTGCCAGAATaGGCCAGCTGGGGCAAATCT +
Preference number: 4 (lower is better)
Translates to: GLACIQKNNFGPHQSIKYLTLPE*ASWGKS
Trigger: AGATTTGCCCCAGCTGGCCCATTCTGGCAGAGTTAG...ATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR TCA 90 bp GATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATGAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: DWHVYRRTILDLTKASNMSGRKV*ESRRGC
Trigger: GCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACT...CATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR CCA 90 bp GATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATATGGGGCAAATCTGCCAGTaGAAGAAAGGTCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: DWHVYRRTILDLTKASNMGQICQ*KKGLRI
Trigger: GATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCC...CATATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS-3UTR TCA 90 bp GGGATTGGCATGTATACAGAAGAACAATTTTGGACCTCACCAAAGCATCAAATACTGTCGAAAGTAAACTaGGTTCCATTCTTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: GIGMYTEEQFWTSPKHQILSKVN*VPFLSS
Trigger: ACTAGACAAGAATGGAACTCAGTTTACTTTCGACAG...TATTTGATGCTTTGGTGAGGTCCAAAATTGTTCTTCTGTATACATGCCAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS TCA 90 bp TGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTGCTAACTCTGCCAGAATGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CGRCVSLVPGWALQC*TGHCPLLTLPEWAS
Trigger: GCTGGCCCATTCTGGCAGAGTTAGCAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCATCCTGGCACCAGGCTTACACAGCGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS TCA 90 bp CCAGAATGGGCCAGCTGGGGCAAATCTGCCAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGCCGCCACTTGCCAGCATGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PEWASWGKSASGRKV*ESRRGCRHLPACPG
Trigger: TCCTGGGCATGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGCCCATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS-3UTR CAA 90 bp CAGAACAGGGCCAGGAGCAGTGGGGTAGCCACACAGTGCAGCATACTCAGGGCTGCTATCTTCAGCCCCTaGGCTGCCAAAAGAGTCGGT +
Preference number: 5 (lower is better)
Translates to: QNRARSSGVATQCSILRAAIFSP*AAKRVG
Trigger: ACCGACTCTTTTGGCAGCCAAGGGGCTGAAGATAGC...AGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCCTGGCCCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS GCA 90 bp AAGCAGAAGTATACCATACCCAGTAGCCCAGGTTGCATAGGGCTGTaGTGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGGGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: KQKYTIPSSPGCIGL*CGRCVSLVPGWALQ
Trigger: TTGCAGTGCCCATCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS GCA 90 bp GAGCTTGGGCAAAAGCAGAAGTATACCATACCCAGTAGCCCAGGTTaGATAGGGCTGTGCTGTGGGCGCTGTGTAAGCCTGGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: ELGQKQKYTIPSSPG*IGLCCGRCVSLVPG
Trigger: TCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTTTTGCCCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS-3UTR CAA 90 bp AAATATGAGAACCATCCCATGAGGCCACCAGAAAATGAACCAGATCCACAAGACAGAGGATGCCGCCACTaGCCAGCATGCCCAGGACAC +
Preference number: 5 (lower is better)
Translates to: KYENHPMRPPENEPDPQDRGCRH*PACPGH
Trigger: GTGTCCTGGGCATGCTGGCAAGTGGCGGCATCCTCT...GTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194046.2
CDS TCA 90 bp ACAATTTTGGACCTCACCAAAGCATCAAATATGAGAACCATCCCATaGGGCCACCAGAAAATGAACCAGATCCACAAGACACTAACCCAG +
Preference number: 5 (lower is better)
Translates to: TILDLTKASNMRTIP*GHQKMNQIHKTLTQ
Trigger: CTGGGTTAGTGTCTTGTGGATCTGGTTCATTTTCTGGTGGCCTCATGGGATGGTTCTCATATTTGATGCTTTGGTGAGGTCCAAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS TCA 72 bp GCCAGCTGGGGCAAATCTGCCAGTGGAAGAAAGGTCTaGGAATCGCGAAGAGGATGCCGCCACTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ASWGKSASGRKV*ESRRGCRHLPA
Trigger: TGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS GCA 72 bp TATACCATACCCAGTAGCCCAGGTTGCATAGGGCTGTaGTGTGGGCGCTGTGTAAGCCTGGTGCCAGGATGG +
Preference number: 6 (lower is better)
Translates to: YTIPSSPGCIGL*CGRCVSLVPGW
Trigger: CCATCCTGGCACCAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS TCA 72 bp TGTGTAAGCCTGGTGCCAGGATGGGCACTGCAATGCTaGACAGGGCACTGCCCACTGCTAACTCTGCCAGAA +
Preference number: 6 (lower is better)
Translates to: CVSLVPGWALQC*TGHCPLLTLPE
Trigger: TTCTGGCAGAGTTAGCAGTGGGCAGTGCCCTGTTCAGCATTGCAGTGCCCATCCTGGCACCAGGCTTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS GCA 72 bp GAAAGGTCTGAGAATCGCGAAGAGGATGCCGCCACTTaGCAGCATGCCCAGGACACTGGTGAGCATGAAGAA +
Preference number: 6 (lower is better)
Translates to: ERSENREEDAAT*QHAQDTGEHEE
Trigger: TTCTTCATGCTCACCAGTGTCCTGGGCATGCTGGCAAGTGGCGGCATCCTCTTCGCGATTCTCAGACCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS GCA 72 bp GCTAACTCTGCCAGAATGGGCCAGCTGGGGCAAATCTaGCAGTGGAAGAAAGGTCTGAGAATCGCGAAGAGG +
Preference number: 6 (lower is better)
Translates to: ANSARMGQLGQI*QWKKGLRIAKR
Trigger: CCTCTTCGCGATTCTCAGACCTTTCTTCCACTGGCAGATTTGCCCCAGCTGGCCCATTCTGGCAGAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000038227.6
ENSMUST00000194046.2
CDS GCA 72 bp CAAAAGCAGAAGTATACCATACCCAGTAGCCCAGGTTaGATAGGGCTGTGCTGTGGGCGCTGTGTAAGCCTG +
Preference number: 6 (lower is better)
Translates to: QKQKYTIPSSPG*IGLCCGRCVSL
Trigger: CAGGCTTACACAGCGCCCACAGCACAGCCCTATGCAACCTGGGCTACTGGGTATGGTATACTTCTGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS CAA 90 bp TGCTCCCCAAAGTCCCACACTGAGTCCCAAGGTGAAGCCACGGAGTaGACCAATATTCAGTCTGGGGTTCAGGCAAGCATAGCATCCTAT +
Preference number: 6 (lower is better)
Translates to: CSPKSHTESQGEATE*TNIQSGVQASIASY
Trigger: ATAGGATGCTATGCTTGCCTGAACCCCAGACTGAATATTGGTCAACTCCGTGGCTTCACCTTGGGACTCAGTGTGGGACTTTGGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS CAA 72 bp GGGGTTCAGGCAAGCATAGCATCCTATCAACAGAGCTaGGGCAAAAGCAGAAGTATACCATACCCAGTAGCC +
Preference number: 6 (lower is better)
Translates to: GVQASIASYQQS*GKSRSIPYPVA
Trigger: GGCTACTGGGTATGGTATACTTCTGCTTTTGCCCAAGCTCTGTTGATAGGATGCTATGCTTGCCTGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS CCA 72 bp ATGCATGTACTTCAAAGCTTCCATGTCTCTGGAGGATaGAAAGGCGCAGAAGCCATTGTAAGCATCACTGGC +
Preference number: 6 (lower is better)
Translates to: MHVLQSFHVSGG*KGAEAIVSITG
Trigger: GCCAGTGATGCTTACAATGGCTTCTGCGCCTTTCCATCCTCCAGAGACATGGAAGCTTTGAAGTACATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6
CDS CCA 72 bp TGGCATAATGCATGTACTTCAAAGCTTCCATGTCTCTaGAGGATGGAAAGGCGCAGAAGCCATTGTAAGCAT +
Preference number: 6 (lower is better)
Translates to: WHNACTSKLPCL*RMERRRSHCKH
Trigger: ATGCTTACAATGGCTTCTGCGCCTTTCCATCCTCCAGAGACATGGAAGCTTTGAAGTACATGCATTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000038227.6