RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACIN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022185

Ensembl transcript IDs: ENSMUST00000022793.15, ENSMUST00000022794.14, ENSMUST00000111484.9, ENSMUST00000123875.2, ENSMUST00000125265.2, ENSMUST00000126166.8, ENSMUST00000138321.2, ENSMUST00000141453.8, ENSMUST00000147714.8, ENSMUST00000148754.10, ENSMUST00000150371.8, ENSMUST00000167015.8

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGACCCTTGGTTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTaGCCTTTGACCTCCCAGGACCAAGTGGCAGGTACCTGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: ETLGSRVVVTVPIPL*PLTSQDQVAGTCSS
Trigger: AGAGCTGCAGGTACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAACCAAGGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CCA 90 bp AAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTaGTTATTCCCACGTACGGCCACATCTTCCCTTCATAGCCTAGCT +
Preference number: 1 (lower is better)
Translates to: KGGGTQDGGKMSVGH*LFPRTATSSLHSLA
Trigger: AGCTAGGCTATGAAGGGAAGATGTGGCCGTACGTGGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACCTCCCAGGACCAAGTaGCAGGTACCTGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: AEYQGRRNAGWRENERGTPPRTK*QVPAAL
Trigger: GAGAGCTGCAGGTACCTGCCACTTGGTCCTGGGAGG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGTTCCAGGGTGGTGGTaGCTGTACCTATCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: AEYQGRRNAGWRENERGTVPGWW*LYLSLC
Trigger: ACAGAGGGATAGGTACAGTCACCACCACCCTGGAAC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCCTCCCAGGACCAAGTaGCAGGTACCTGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAPPRTK*QVPAAL
Trigger: GAGAGCTGCAGGTACCTGCCACTTGGTCCTGGGAGG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCCTCCCAGGACCAAGTaGCAGGTACCTGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWPPRTK*QVPAAL
Trigger: GAGAGCTGCAGGTACCTGCCACTTGGTCCTGGGAGG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTTCAGCACTGAGCAATaGTGTGAGACCCTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: GRRNAGWRENERGTLVIPFSTEQ*CETLGS
Trigger: GGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGTTCCAGGGTGGTGGTaGCTGTACCTATCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHVPGWW*LYLSLC
Trigger: ACAGAGGGATAGGTACAGTCACCACCACCCTGGAAC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCCAAGAGTTAGGTTaGGGAACAGGGAGATTGCCA +
Preference number: 2 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFQELG*GTGRLP
Trigger: TGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCCTCCCAGGACCAAGTaGCAGGTACCTGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRPPRTK*QVPAAL
Trigger: GAGAGCTGCAGGTACCTGCCACTTGGTCCTGGGAGG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTTCAGCACTGAGCAATaGTGTGAGACCCTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHFSTEQ*CETLGS
Trigger: GGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGTACCTATCCCTCTGTaGCCTTTGACCTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRVPIPL*PLTSQD
Trigger: GTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTAC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGTTCCAGGGTGGTGGTaGCTGTACCTATCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: SSLSDLTGRKERAKFQELVPGWW*LYLSLC
Trigger: ACAGAGGGATAGGTACAGTCACCACCACCCTGGAAC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTCAGCACTGAGCAATaGTGTGAGACCCTTGGTTCC +
Preference number: 2 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRFSTEQ*CETLGS
Trigger: GGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CCA 72 bp GGTTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTaGCCTTTGACCTCCCAGGACCAAGTGGCAGGTACC +
Preference number: 3 (lower is better)
Translates to: GSRVVVTVPIPL*PLTSQDQVAGT
Trigger: GGTACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAATCCCTCTGTGGCCTTaGACCTCCCAGGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: AEYQGRRNAGWRENERGTIPLWP*TSQDQV
Trigger: CACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGAT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCATCCCTCTGTGGCCTTaGACCTCCCAGGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: GRRNAGWRENERGTLVIPIPLWP*TSQDQV
Trigger: CACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGAT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR TCA 72 bp GTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATaGGCGTGGGACACTGGTTATTCCCACGTACGGCCA +
Preference number: 3 (lower is better)
Translates to: VPREAERRMEGK*AWDTGYSHVRP
Trigger: TGGCCGTACGTGGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATCCCTCTGTGGCCTTaGACCTCCCAGGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: GEGQVPRVRLGNREIATAIPLWP*TSQDQV
Trigger: CACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR TCA 72 bp GGAAGCAGAACCACACCCACAGACCTGACCTCCACATaGGCAACATGGCAAGCGCATCCTTTCCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: GSRTTPTDLTST*ATWQAHPFLSP
Trigger: TGGGGACAGGAAAGGATGCGCTTGCCATGTTGCTCATGTGGAGGTCAGGTCTGTGGGTGTGGTTCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
3UTR TCA 72 bp CATGGAGAGGTGGAAGCAGAACCACACCCACAGACCTaGCCTCCACATGAGCAACATGGCAAGCGCATCCTT +
Preference number: 3 (lower is better)
Translates to: HGEVEAEPHPQT*PPHEQHGKRIL
Trigger: AAGGATGCGCTTGCCATGTTGCTCATGTGGAGGTCAGGTCTGTGGGTGTGGTTCTGCTTCCACCTCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
3UTR CCA 72 bp CAAAAGGCTGAGTACCAAGGGAGGCGGAACGCAGGATaGAGGGAAAATGAGCGTGGGACACTGGTTATTCCC +
Preference number: 3 (lower is better)
Translates to: QKAEYQGRRNAG*RENERGTLVIP
Trigger: GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGCCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CCA 72 bp AACAGTTTCTCAAACCCACAAGCTCTAGTTCCTGCCTaGCGGCCACTTTCACCCTCTCCACAGCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: NSFSNPQALVPA*RPLSPSPQLPP
Trigger: AGGAGGGAGCTGTGGAGAGGGTGAAAGTGGCCGCCAGGCAGGAACTAGAGCTTGTGGGTTTGAGAAACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
3UTR CCA 72 bp AGACAACTTAGTTCAGCCCTGGAGTCCATGGAGAGGTaGAAGCAGAACCACACCCACAGACCTGACCTCCAC +
Preference number: 3 (lower is better)
Translates to: RQLSSALESMER*KQNHTHRPDLH
Trigger: GTGGAGGTCAGGTCTGTGGGTGTGGTTCTGCTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
3UTR-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCATCCCTCTGTGGCCTTaGACCTCCCAGGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAIPLWP*TSQDQV
Trigger: CACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGAT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CCA 72 bp CAAAAGCCAGACAACTTAGTTCAGCCCTGGAGTCCATaGAGAGGTGGAAGCAGAACCACACCCACAGACCTG +
Preference number: 3 (lower is better)
Translates to: QKPDNLVQPWSP*RGGSRTTPTDL
Trigger: CAGGTCTGTGGGTGTGGTTCTGCTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTGTCTGGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
3UTR-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGATCCCTCTGTGGCCTTaGACCTCCCAGGACCAAGTG +
Preference number: 3 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRIPLWP*TSQDQV
Trigger: CACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGAT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CCA 72 bp GGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTaGGGAACAGGGAGATTGCCACTGCTCCATTTGATA +
Preference number: 3 (lower is better)
Translates to: GRKERAKFQELG*GTGRLPLLHLI
Trigger: TATCAAATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp ACAAGCTCTAGTTCCTGCCTGGCGGCCACTTTCACCCTCTCCACAGCTCCCTCCTGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: TSSSSCLAATFTLSTAPSCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...GGAGGGAGCTGTGGAGAGGGTGAAAGTGGCCGCCAGGCAGGAACTAGAGCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPQGNLH*HLGWRR
Trigger: CCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTTSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPTSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGGGEGT*AVRTGS
Trigger: TGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPDLAPG*GGHLGG
Trigger: ACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTDLAPG*GGHLGG
Trigger: ACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATACSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGQGNLH*HLGWRR
Trigger: CCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGQGNLH*HLGWRR
Trigger: CCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATGGACTGGGGCCACTTaGCCCCGTGCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTWTGAT*PRAELC
Trigger: GCACAGCTCTGCACGGGGTCAAGTGGCCCCAGTCCA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GCCACAAAAGCCAGACAACTTAGTTCAGCCCTGGAGTCCATGGAGAGGTGGAAGGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ATKARQLSSALESMERWKAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...CTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTGTCTGGCTTTTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCCCCGTGCAGAGCTGTaGGGGTGGCAACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPPRAEL*GWQRLP
Trigger: AGGAAGCCGTTGCCACCCGCACAGCTCTGCACGGGG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGTSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGTSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGGEGT*AVRTGS
Trigger: TGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSDLAPG*GGHLGG
Trigger: ACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTGGACTGGGGCCACTTaGCCCCGTGCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSWTGAT*PRAELC
Trigger: GCACAGCTCTGCACGGGGTCAAGTGGCCCCAGTCCA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGGACTGGGGCCACTTaGCCCCGTGCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGWTGAT*PRAELC
Trigger: GCACAGCTCTGCACGGGGTCAAGTGGCCCCAGTCCA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCCCGTGCAGAGCTGTaGGGGTGGCAACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGPRAEL*GWQRLP
Trigger: AGGAAGCCGTTGCCACCCGCACAGCTCTGCACGGGG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCCCCGTGCAGAGCTGTaGGGGTGGCAACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSPRAEL*GWQRLP
Trigger: AGGAAGCCGTTGCCACCCGCACAGCTCTGCACGGGG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCCACTTGACCCCGTaGAGAGCTGTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGHLTP*RAVRVA
Trigger: TGCCACCCGCACAGCTCTGCACGGGGTCAAGTGGCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCCCTCCTCTCTTCCTCTCCTAAGCCAATGCCAGGGCCTACACTGTGGGTCATGCGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SLLSSSPKPMPGPTLWVMRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...CATGACCCACAGTGTAGGCCCTGGCATTGGCTTAGGAGAGGAAGAGAGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGGCGCTTGGTGTCTCTaGGATCCCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPGAWCL*DPSPCL
Trigger: GAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGCGCTTGGTGTCTCTaGGATCCCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGAWCL*DPSPCL
Trigger: GAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAGCCTCGCTGCTCCAGTaGGGCCTTCAGGTCGGTCAC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGASLLQ*GLQVGH
Trigger: GTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGC...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATATSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGGEGT*AVRTGS
Trigger: TGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATADLAPG*GGHLGG
Trigger: ACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTGGACTGGGGCCACTTaGCCCCGTGCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAWTGAT*PRAELC
Trigger: GCACAGCTCTGCACGGGGTCAAGTGGCCCCAGTCCA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGTCACCCGCAGAGCCTaGAGAGGCTTCCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGVTRRA*RGFPSR
Trigger: TCTGGACGGGAAGCCTCTTCAGGCTCTGCGGGTGAC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGAGGAGACAACTGAATaGGGACAGGGGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTEETTE*GQGVLG
Trigger: GCCCAGCACCCCCTGTCCTCATTCAGTTGTCTCCTC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGCCACTTGACCCCGTaGAGAGCTGTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGHLTP*RAVRVA
Trigger: TGCCACCCGCACAGCTCTGCACGGGGTCAAGTGGCC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCGCTTGGTGTCTCTaGGATCCCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGAWCL*DPSPCL
Trigger: GAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAACCAGGGCACTCTTCTaGCCGCTCTTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTTRALF*PLLARP
Trigger: AGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAAATGAGGACAGGGGGTaGTGGGCCTTCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTNEDRG*WAFHWL
Trigger: GAGCCAGTGGAAGGCCCAGCACCCCCTGTCCTCATT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTCTGCCCATTCTCCTaGCCCTCTGCGGGTACTACC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTLCPFS*PSAGTT
Trigger: GGTAGTACCCGCAGAGGGCCAGGAGAATGGGCAGAG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGCCACTCCCTCAGGATaGGTCATCTCGTCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPATPSG*VISSSD
Trigger: GTCGGAGGACGAGATGACCCATCCTGAGGGAGTGGC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGCTCTGGCTCAGGATaGCTCAGATGCCTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGCSGSG*LRCLPR
Trigger: CCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTRESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTCCGCCATCTTGCGTaGGGTACTCGGGTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLRHLA*GTRVRP
Trigger: GGGACGGACCCGAGTACCTCACGCAAGATGGCGGAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022793.15
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGTCCTCCGACTCAGCTaGGGCTTCTTCAAGTTCCGC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPVLRLS*GFFKFR
Trigger: GCGGAACTTGAAGAAGCCTCAGCTGAGTCGGAGGAC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGGGTGAATGTGTGCTaGGCTCCAGCTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGVNVC*APALVC
Trigger: ACAGACCAGAGCTGGAGCTCAGCACACATTCACCCC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAGAGGAGACAACTGAATaGGGACAGGGGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGEETTE*GQGVLG
Trigger: GCCCAGCACCCCCTGTCCTCATTCAGTTGTCTCCTC...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp CCACAAGCTCTAGTTCCTGCCTGGCGGCCACTTTCACCCTCTCCACAGCTCCCTGACAGCTCCAGCTGCTaGCAATGGGAGAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PQALVPAWRPLSPSPQLPDSSSC*QWESTH
Trigger: GTGAGTACTCTCCCATTGTCAGCAGCTGGAGCTGTC...AGGGAGCTGTGGAGAGGGTGAAAGTGGCCGCCAGGCAGGAACTAGAGCTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATCCACAACAGCCTCCTaGCCCGCCAGGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGSTTAS*PARGLM
Trigger: CATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCCCCGTGCAGAGCTGTaGGGGTGGCAACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHPRAEL*GWQRLP
Trigger: AGGAAGCCGTTGCCACCCGCACAGCTCTGCACGGGG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAATGCAGGGGCCTTGGTaGTCCCTGTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTMQGPW*SLFLCL
Trigger: AAGGCAGAGGAACAGGGAGCACCAAGGCCCCTGCAT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFDSGF*CGAWCL
Trigger: GAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTCCCGTTCCAGGCGCTaGCTAAGTAGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSSRSRR*LSSSCC
Trigger: GCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCTCTGCCCATTCTCCTaGCCCTCTGCGGGTACTACC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLCPFS*PSAGTT
Trigger: GGTAGTACCCGCAGAGGGCCAGGAGAATGGGCAGAG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTCTGCCCATTCTCCTaGCCCTCTGCGGGTACTACC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLCPFS*PSAGTT
Trigger: GGTAGTACCCGCAGAGGGCCAGGAGAATGGGCAGAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIATSTDT*GGAGSS
Trigger: CGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp CAACTTAGTTCAGCCCTGGAGTCCATGGAGAGGTGGAAGCAGAACCACACCCACGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLSSALESMERWKQNHTHGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...GTGGGTGTGGTTCTGCTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLRLLL*RLVSLR
Trigger: TCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCAGCTGTGGCCCAGATaGAGCTGCAGCCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAQLWPR*SCSLLT
Trigger: GGTCAGGAGGCTGCAGCTCCATCTGGGCCACAGCTG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGAHHC*LGLQQA
Trigger: TGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGRESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPSAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPCGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTGGACTGGGGCCACTTaGCCCCGTGCAGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAWTGAT*PRAELC
Trigger: GCACAGCTCTGCACGGGGTCAAGTGGCCCCAGTCCA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELAVTGP*SGAGSL
Trigger: GAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGTCCTCCGACTCAGCTaGGGCTTCTTCAAGTTCCGC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGVLRLS*GFFKFR
Trigger: GCGGAACTTGAAGAAGCCTCAGCTGAGTCGGAGGAC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGGGTGAATGTGTGCTaGGCTCCAGCTCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGVNVC*APALVC
Trigger: ACAGACCAGAGCTGGAGCTCAGCACACATTCACCCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAGGCAGTGAGCTTTTCTaGGCCAGAGGCAGGACACTC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGGSELF*ARGRTL
Trigger: GAGTGTCCTGCCTCTGGCTCAGAAAAGCTCACTGCC...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGAGCTGCAGCCTCCTaGCCACAAGAGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGAAAS*PQEGSL
Trigger: CAAAGATCCCTCTTGTGGTCAGGAGGCTGCAGCTCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTCCACAACAGCCTCCTaGCCCGCCAGGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATASTTAS*PARGLM
Trigger: CATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATCTTCCTCTTCCCTCTaGCCATTCTCCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTSSSSL*PFSWPS
Trigger: AGAGGGCCAGGAGAATGGGCAGAGGGAAGAGGAAGA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGGCCACTTGACCCCGTaGAGAGCTGTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWGHLTP*RAVRVA
Trigger: TGCCACCCGCACAGCTCTGCACGGGGTCAAGTGGCC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGCCACTTGACCCCGTaGAGAGCTGTGCGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGHLTP*RAVRVA
Trigger: TGCCACCCGCACAGCTCTGCACGGGGTCAAGTGGCC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTATGCAGGGGCCTTGGTaGTCCCTGTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGMQGPW*SLFLCL
Trigger: AAGGCAGAGGAACAGGGAGCACCAAGGCCCCTGCAT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCGAACAGCCCTTTCCTaGTCCCGCTGCTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWRTALS*SRCSAR
Trigger: CCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCCAGCTCCGCCATCTTaGGTGAGGTACTCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHPAPPS*VRYSGP
Trigger: CGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022793.15
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGCCTCGCTGCTCCAGTaGGGCCTTCAGGTCGGTCAC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAASLLQ*GLQVGH
Trigger: GTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTACCAGGGCACTCTTCTaGCCGCTCTTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATATRALF*PLLARP
Trigger: AGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATGGATCACGTGCTGTTaGTCTGGCTCAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTWITCC*SGSGWL
Trigger: GAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRGGEGT*AVRTGS
Trigger: TGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATGCTCAGCCCGGGGGTaGGGCGGTGGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELCSARG*GGGWTG
Trigger: CCCAGTCCAGCCACCGCCCCACCCCCGGGCTGAGCA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCTGCTGTGGCGCTTaGTGTCTCTGCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFCCGA*CLCDPS
Trigger: AGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCAGGAAGCGGAGGTaGGGAGGGAGACTGGGATTT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFRKRR*GGRLGF
Trigger: AAATCCCAGTCTCCCTCCCCACCTCCGCTTCCTGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTGCTGGGCCTTCCACTaGCTCCATCTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSCWAFH*LHLFLE
Trigger: CTCCAGGAAGAGATGGAGCCAGTGGAAGGCCCAGCA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGCTGGGCCTTCCACTaGCTCCATCTCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGCWAFH*LHLFLE
Trigger: CTCCAGGAAGAGATGGAGCCAGTGGAAGGCCCAGCA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGGAGCCTTCTCCTTTaGTTCAAGGACCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGSLLL*FKDLQL
Trigger: CAGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCACGTGCTGTTGCTCTaGCTCAGGATGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPHVLLL*LRMAQM
Trigger: CATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACACGTGCTGTTGCTCTaGCTCAGGATGGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTHVLLL*LRMAQM
Trigger: CATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCTGTGTGGCAGCTGGTaGCTCTGCCTCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLCGSW*LCLFSF
Trigger: GAAGCTGAAGAGGCAGAGCCACCAGCTGCCACACAG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTGTGTGGCAGCTGGTaGCTCTGCCTCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLCGSW*LCLFSF
Trigger: GAAGCTGAAGAGGCAGAGCCACCAGCTGCCACACAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTAGGTTTGAGGCTGTGTaGCAGCTGGTGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSRFEAV*QLVALP
Trigger: AGGCAGAGCCACCAGCTGCCACACAGCCTCAAACCT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAAACCCCGAGTTCGGCTaGACTGGTCTCTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGNPEFG*TGLSGG
Trigger: TCCTCCAGAGAGACCAGTCCAGCCGAACTCGGGGTT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGAHHC*LGLQQA
Trigger: TGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGCGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSCGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGCGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTCAGCTGGCCTAAAGTaGAGGGACGAACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSSAGLK*RDEPGW
Trigger: CCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCAGCTGGCCTAAAGTaGAGGGACGAACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSAGLK*RDEPGW
Trigger: CCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTGTTCAGGCTGCTCTaGAAATCAGGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLFRLL*KSGGSR
Trigger: CCTGCTGCCTCCTGATTTTCAGAGCAGCCTGAACAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCAGGACACTCTCATCTaGCACTCTCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSQDTLI*HSPCWR
Trigger: TCTCCAGCAGGGAGAGTGTCAGATGAGAGTGTCCTG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTIADLV*NRQRRL
Trigger: GAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAAT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTATTCTCCTGGCCCTCTaGGGGTACTACCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSILLAL*GYYLSD
Trigger: GTCACTCAGGTAGTACCCGCAGAGGGCCAGGAGAAT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCTTCCTCTTCCCTCTaGCCATTCTCCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSSSSL*PFSWPS
Trigger: AGAGGGCCAGGAGAATGGGCAGAGGGAAGAGGAAGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATGCAGGGGCCTTGGTaGTCCCTGTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAMQGPW*SLFLCL
Trigger: AAGGCAGAGGAACAGGGAGCACCAAGGCCCCTGCAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGCGCTTGGTGTCTCTaGGATCCCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGAWCL*DPSPCL
Trigger: GAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAFDSGF*CGAWCL
Trigger: GAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCATGGGAGGCTCTTCTaGCCTCCTTCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPHGRLF*PPSVPK
Trigger: CTTTGGAACAGAAGGAGGGCAGAAGAGCCTCCCATG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATCACTGTTTCCAGCTTaGACCCCCTTGGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTSLFPA*TPLVAE
Trigger: CTCAGCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000126166.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTCACTGTTTCCAGCTTaGACCCCCTTGGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPSLFPA*TPLVAE
Trigger: CTCAGCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000126166.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTCTGCCCATTCTCCTaGCCCTCTGCGGGTACTACC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLCPFS*PSAGTT
Trigger: GGTAGTACCCGCAGAGGGCCAGGAGAATGGGCAGAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGGEGT*AVRTGS
Trigger: TGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACAGCACAAAGGAATTTaGGGTTGGACTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTQHKGI*GWTGAT
Trigger: AGTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGGTCATCCAGCAGCTTaGCAGGTGGCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWGHPAA*QVAPPG
Trigger: CCCAGGAGGAGCCACCTGCCAAGCTGCTGGATGACC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLRLLL*RLVSLR
Trigger: TCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGCTGAGCTCCAGCTCTaGTCTGTTCAGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAAELQL*SVQAAL
Trigger: CAGAGCAGCCTGAACAGACCAGAGCTGGAGCTCAGC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTATCTGGATGGAGAGCTaGAGGATGAAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSIWMES*RMKGRR
Trigger: CCTCCTCCCCTTCATCCTCCAGCTCTCCATCCAGAT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAATCTGGATGGAGAGCTaGAGGATGAAGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGIWMES*RMKGRR
Trigger: CCTCCTCCCCTTCATCCTCCAGCTCTCCATCCAGAT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTAGCTTCACACTTCTTTaGGCTCCCCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATASFTLL*APLLRL
Trigger: CAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TCCCTCCTCTCTTCCTCTCCTAAGCCAATGCCAGGGCCTACACTGTGGGTCATGGGGAGAGTACTCACTTaGCTCTCAGTCAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLSSSPKPMPGPTLWVMGRVLT*LSVRGS
Trigger: GCTCCCTCTGACTGAGAGCCAAGTGAGTACTCTCCC...CATGACCCACAGTGTAGGCCCTGGCATTGGCTTAGGAGAGGAAGAGAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCGGGTACTACCTGAGTaGCTGTCCGGCATATCTTCA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGRVLPE*LSGISS
Trigger: TGAAGATATGCCGGACAGTCACTCAGGTAGTACCCG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATASAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELQGNLH*HLGWRR
Trigger: CCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTCAGCTGGCCTAAAGTaGAGGGACGAACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATASAGLK*RDEPGW
Trigger: CCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTGCTCTGCCTCCTTCTaGACAATTTGGCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPCSASF*TIWLSV
Trigger: GACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATTAGGAGGAGACAACTaGATGAGGACAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLGGDN*MRTGGA
Trigger: AGCACCCCCTGTCCTCATTCAGTTGTCTCCTCCTAA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCAGGACACTCTCATCTaGCACTCTCCCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAQDTLI*HSPCWR
Trigger: TCTCCAGCAGGGAGAGTGTCAGATGAGAGTGTCCTG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGIADLV*NRQRRL
Trigger: GAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAAT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGIADLV*NRQRRL
Trigger: GAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAAT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCCACAACAGCCTCCTaGCCCGCCAGGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSTTAS*PARGLM
Trigger: CATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATTCTCCTGGCCCTCTaGGGGTACTACCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAILLAL*GYYLSD
Trigger: GTCACTCAGGTAGTACCCGCAGAGGGCCAGGAGAAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTTFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPTFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCCCCGTGCAGAGCTGTaGGGGTGGCAACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRPRAEL*GWQRLP
Trigger: AGGAAGCCGTTGCCACCCGCACAGCTCTGCACGGGG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGCSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATTGGCCCCGCCCACTaGCATAGTCTACCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAIGPAH*HSLPLY
Trigger: ATAGAGGGGTAGACTATGGCAGTGGGCGGGGCCAAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000022793.15
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCACCTTTTCTGGTTTTaGTCTGGTCCTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPHLFWF*SGPLFP
Trigger: GGGGAAGAGAGGACCAGAGCAAAACCAGAAAAGGTG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCCCTGCTGGAGACTCTaGTTTGGTGTCTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGPCWRL*FGVCST
Trigger: GGTACTACAGACACCAAAGCAGAGTCTCCAGCAGGG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCTCAGAGATTTTCTaGTGCTGCTTGACGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGSEIF*CCLTRN
Trigger: GTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTTTGGTTCAAGGACCTaGAGCTGTGGCCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGFGSRT*SCGPDG
Trigger: TCCATCTGGGCCACAGCTGCAGGTCCTTGAACCAAA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGCAGCTGGTGGCTCTaGCTCTTCAGCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGSWWL*LFSFTL
Trigger: AAGTGTGAAGCTGAAGAGGCAGAGCCACCAGCTGCC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCACTGTTTCCAGCTTaGACCCCCTTGGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSLFPA*TPLVAE
Trigger: CTCAGCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000126166.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCTCTGCCCATTCTCCTaGCCCTCTGCGGGTACTACC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWLCPFS*PSAGTT
Trigger: GGTAGTACCCGCAGAGGGCCAGGAGAATGGGCAGAG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTTCGTGCTCCACAGGTaGGGGCAAGGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWFVLHR*GQGNLH
Trigger: GTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLGGPD*VINCNG
Trigger: TCCATTACAATTGATGACCCAGTCCGGACCGCCCAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLGGPD*VINCNG
Trigger: TCCATTACAATTGATGACCCAGTCCGGACCGCCCAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGCAGAGCTGTGCGGGTaGCAACGGCTTCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAAELCG*QRLPLL
Trigger: CAGTAGAGGAAGCCGTTGCCACCCGCACAGCTCTGC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCAGCACAAAGGAATTTaGGGTTGGACTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGQHKGI*GWTGAT
Trigger: AGTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIALRLLL*RLVSLR
Trigger: TCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAAAACTGCTTCAGGGTTaGTGCCTCAGCCTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTKLLQG*CLSLSR
Trigger: TCTAGAGAGGCTGAGGCACCAACCCTGAAGCAGTTT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTCAGGAAGCGGAGGTaGGGAGGGAGACTGGGATTT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAFRKRR*GGRLGF
Trigger: AAATCCCAGTCTCCCTCCCCACCTCCGCTTCCTGAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACACACTGTCAGGAGATaGAGATCTGGATGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTHTVRR*RSGWRA
Trigger: AGCTCTCCATCCAGATCTCCATCTCCTGACAGTGTG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGGTGTTGCTATCTCTaGAGACTCCAGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGWCCYL*RLQGSE
Trigger: CTCTGAGCCCTGGAGTCTCCAGAGATAGCAACACCA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAAGGACCTGCAGCTGTaGCCCAGATGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAKDLQL*PRWSCS
Trigger: GCTGCAGCTCCATCTGGGCCACAGCTGCAGGTCCTT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTGGACTGGTCTCTCTaGAGGAAGAGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATALDWSL*RKRRKR
Trigger: CCTCTTCCTCCTCTTCCTCCAGAGAGACCAGTCCAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCGAGTTCGGCTGGACTaGTCTCTCTGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRVRLD*SLWRKR
Trigger: CCTCTTCCTCCAGAGAGACCAGTCCAGCCGAACTCG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGAHHC*LGLQQA
Trigger: TGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTRRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWRESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIARESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCGGGTACTACCTGAGTaGCTGTCCGGCATATCTTCA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATARVLPE*LSGISS
Trigger: TGAAGATATGCCGGACAGTCACTCAGGTAGTACCCG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHSAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTGCTCTGCCTCCTTCTaGACAATTTGGCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSCSASF*TIWLSV
Trigger: GACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGTCACCCGCAGAGCCTaGAGAGGCTTCCCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRVTRRA*RGFPSR
Trigger: TCTGGACGGGAAGCCTCTTCAGGCTCTGCGGGTGAC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTAGGAGGAGACAACTaGATGAGGACAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATALGGDN*MRTGGA
Trigger: AGCACCCCCTGTCCTCATTCAGTTGTCTCCTCCTAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGTGTCTGTAGTACCTaGCAAAGGAGACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGVCST*QRRQAS
Trigger: AGAAGCCTGTCTCCTTTGTCAGGTACTACAGACACC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGAGCTGCAGCCTCCTaGCCACAAGAGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGAAAS*PQEGSL
Trigger: CAAAGATCCCTCTTGTGGTCAGGAGGCTGCAGCTCC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAIADLV*NRQRRL
Trigger: GAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCACTGTTTCCAGCTTaGACCCCCTTGGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSLFPA*TPLVET
Trigger: TGTCTCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022794.14
ENSMUST00000141453.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATACSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTIDAGS*LSLTEE
Trigger: CTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTAT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCCGTTCAGCTTGCTCTaGCTCCTTCTGAACAATTTG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPPFSLL*LLLNNL
Trigger: CAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAFDSGF*CGAWCL
Trigger: GAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTGCCTAAGTAGCTCCTaGTGCTTTTCCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPCLSSS*CFSRYC
Trigger: GCAGTATCTGGAAAAGCAGCAGGAGCTACTTAGGCA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCTGGTCTGTTCAGGCTaGTCTGAAAATCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLVCSG*SENQEA
Trigger: TGCCTCCTGATTTTCAGAGCAGCCTGAACAGACCAG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTGGTCTGTTCAGGCTaGTCTGAAAATCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLVCSG*SENQEA
Trigger: TGCCTCCTGATTTTCAGAGCAGCCTGAACAGACCAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGCTCAGAGATTTTCTaGTGCTGCTTGACGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGSEIF*CCLTRN
Trigger: GTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCAGTGTAGCTGGTGTTaGTATCTCTGGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGQCSWC*YLWRLQ
Trigger: CTGGAGTCTCCAGAGATAGCAACACCAGCTACACTG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPSSLLT*SATGRG
Trigger: TCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTSSLLT*SATGRG
Trigger: TCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATALGGPD*VINCNG
Trigger: TCCATTACAATTGATGACCCAGTCCGGACCGCCCAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIANLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCAGCACAAAGGAATTTaGGGTTGGACTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAQHKGI*GWTGAT
Trigger: AGTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTTCTGCTGTGGCGCTTaGTGTCTCTGCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHFCCGA*CLCDPS
Trigger: AGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGCTGAGCTCCAGCTCTaGTCTGTTCAGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWAELQL*SVQAAL
Trigger: CAGAGCAGCCTGAACAGACCAGAGCTGGAGCTCAGC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTAAACTGCTTCAGGGTTaGTGCCTCAGCCTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGKLLQG*CLSLSR
Trigger: TCTAGAGAGGCTGAGGCACCAACCCTGAAGCAGTTT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCATCCACCACCTTTTCTaGTTTTGCTCTGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPIHHLF*FCSGPL
Trigger: GAGAGGACCAGAGCAAAACCAGAAAAGGTGGTGGAT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTTTCAACACCCTTCTaGGTGGAGCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLSTPF*VEHSGS
Trigger: ACTGCCTGAATGCTCCACCCAGAAGGGTGTTGAAAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAACTCTGAAGTTGACCTaGAGCCCATCTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGTLKLT*SPSWVS
Trigger: AGAGACCCAAGATGGGCTCCAGGTCAACTTCAGAGT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAGCTTCACACTTCTTTaGGCTCCCCTGCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIASFTLL*APLLRL
Trigger: CAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATGCTGTTTATCCCTTTaGCAAACCCCGAGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGCCLSL*QTPSSA
Trigger: AGCCGAACTCGGGGTTTGCCAAAGGGATAAACAGCA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGAHHC*LGLQQA
Trigger: TGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTDFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGRRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGATGAGGCTCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSDEALE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGAGCCTCATC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCGGGTACTACCTGAGTaGCTGTCCGGCATATCTTCA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRVLPE*LSGISS
Trigger: TGAAGATATGCCGGACAGTCACTCAGGTAGTACCCG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIACGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTGTGGACAATGTTACTaGTCTTGCCCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWCGQCY*SCPWVG
Trigger: CCCCACCCAGGGGCAAGATCAGTAACATTGTCCACA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTCAGCTGGCCTAAAGTaGAGGGACGAACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIASAGLK*RDEPGW
Trigger: CCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTGCTCTGCCTCCTTCTaGACAATTTGGCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATACSASF*TIWLSV
Trigger: GACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTGTCTAACTCTGGATaGTCGTCTTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLSNSG*SSFPFP
Trigger: AGGAAAGGGGAAAGACGATCATCCAGAGTTAGACAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATAGAGATCTGAGTCTCTaGGGTTTGAGGCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRDLSL*GLRLCG
Trigger: GCCACACAGCCTCAAACCTCAGAGACTCAGATCTCT...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCCACAACAGCCTCCTaGCCCGCCAGGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSTTAS*PARGLM
Trigger: CATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGATTCTCCTGGCCCTCTaGGGGTACTACCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWILLAL*GYYLSD
Trigger: GTCACTCAGGTAGTACCCGCAGAGGGCCAGGAGAAT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCTTCCTCTTCCCTCTaGCCATTCTCCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSSSSL*PFSWPS
Trigger: AGAGGGCCAGGAGAATGGGCAGAGGGAAGAGGAAGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATATFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHCSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSIDAGS*LSLTEE
Trigger: CTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTAT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGIDAGS*LSLTEE
Trigger: CTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTAT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGAGATTTTCTGCTGCTaGTTGACGCGGAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHEIFCC*LTRNGN
Trigger: GTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTTTGGTTCAAGGACCTaGAGCTGTGGCCCAGATGGA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHFGSRT*SCGPDG
Trigger: TCCATCTGGGCCACAGCTGCAGGTCCTTGAACCAAA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTTTCACTGGTGTCCATaGTCACTTCCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPFHWCP*SLPPSL
Trigger: AAGAGAAGGAGGAAGTGACCATGGACACCAGTGAAA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCAGGTCTGTTTTCACTaGTGTCCATGGTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSQVCFH*CPWSLP
Trigger: AGGAAGTGACCATGGACACCAGTGAAAACAGACCTG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGSSLLT*SATGRG
Trigger: TCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTTCTGCTGTGGCGCTTaGTGTCTCTGCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWFCCGA*CLCDPS
Trigger: AGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRLRLLL*RLVSLR
Trigger: TCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCTTCTGCCCGCTCTTaGCTAGGCCTCGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSSARS*LGLAAP
Trigger: TGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGGCTGGAATGCAGCATaGGGTGTTGAGTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGGWNAA*GVECFC
Trigger: ACAAAAACACTCAACACCCCATGCTGCATTCCAGCC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCCTCAGGTTTCTAGATaGTGTCTCTTGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPPQVSR*CLLILF
Trigger: GAAGAGGATCAAGAGACACCATCTAGAAACCTGAGG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTACTCTGAAGTTGACCTaGAGCCCATCTTGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATATLKLT*SPSWVS
Trigger: AGAGACCCAAGATGGGCTCCAGGTCAACTTCAGAGT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACAGCTGTGGCCCAGATaGAGCTGCAGCCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELQLWPR*SCSLLT
Trigger: GGTCAGGAGGCTGCAGCTCCATCTGGGCCACAGCTG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATGCTCTGGCTCAGGATaGCTCAGATGCCTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELCSGSG*LRCLPR
Trigger: CCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGDFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCGGGTACTACCTGAGTaGCTGTCCGGCATATCTTCA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIARVLPE*LSGISS
Trigger: TGAAGATATGCCGGACAGTCACTCAGGTAGTACCCG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGTGTCTGTAGTACCTaGCAAAGGAGACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGVCST*QRRQAS
Trigger: AGAAGCCTGTCTCCTTTGTCAGGTACTACAGACACC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAGAGATCTGAGTCTCTaGGGTTTGAGGCTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIARDLSL*GLRLCG
Trigger: GCCACACAGCCTCAAACCTCAGAGACTCAGATCTCT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWIADLV*NRQRRL
Trigger: GAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAAT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCCACAACAGCCTCCTaGCCCGCCAGGGGTTTGATG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSTTAS*PARGLM
Trigger: CATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHTFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIACSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGATGCAGGGGCCTTGGTaGTCCCTGTTCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRMQGPW*SLFLCL
Trigger: AAGGCAGAGGAACAGGGAGCACCAAGGCCCCTGCAT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATALFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GACAACTTAGTTCAGCCCTGGAGTCCATGGAGAGGTGGAAGCAGAACCACACCCATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DNLVQPWSPWRGGSRTTPIDAGS*LSLTEE
Trigger: CTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTAT...GGGTGTGGTTCTGCTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR GCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCGTTCAGCTTGCTCTaGCTCCTTCTGAACAATTTG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAPFSLL*LLLNNL
Trigger: CAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRFDSGF*CGAWCL
Trigger: GAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCCCGTACAGGTGTaGTTCGACTCCGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGPVQV*FDSGFC
Trigger: GCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCCCGTTCCAGGCGCTaGCTAAGTAGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSRSRR*LSSSCC
Trigger: GCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCACCTTTTCTGGTTTTaGTCTGGTCCTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHHLFWF*SGPLFP
Trigger: GGGGAAGAGAGGACCAGAGCAAAACCAGAAAAGGTG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCCCTGCTGGAGACTCTaGTTTGGTGTCTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWPCWRL*FGVCST
Trigger: GGTACTACAGACACCAAAGCAGAGTCTCCAGCAGGG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCATGGGAGGCTCTTCTaGCCTCCTTCTGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWHGRLF*PPSVPK
Trigger: CTTTGGAACAGAAGGAGGGCAGAAGAGCCTCCCATG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGAGATTTTCTGCTGCTaGTTGACGCGGAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWEIFCC*LTRNGN
Trigger: GTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCAGTGTAGCTGGTGTTaGTATCTCTGGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHQCSWC*YLWRLQ
Trigger: CTGGAGTCTCCAGAGATAGCAACACCAGCTACACTG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCACTGTTTCCAGCTTaGACCCCCTTGGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSLFPA*TPLVAE
Trigger: CTCAGCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000126166.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATTTCACTGGTGTCCATaGTCACTTCCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGFHWCP*SLPPSL
Trigger: AAGAGAAGGAGGAAGTGACCATGGACACCAGTGAAA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTTTCACTGGTGTCCATaGTCACTTCCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGFHWCP*SLPPSL
Trigger: AAGAGAAGGAGGAAGTGACCATGGACACCAGTGAAA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWLGGPD*VINCNG
Trigger: TCCATTACAATTGATGACCCAGTCCGGACCGCCCAG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIALGGPD*VINCNG
Trigger: TCCATTACAATTGATGACCCAGTCCGGACCGCCCAG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: AEYQGRRNAGWRENERGTNNSFS*PKVKGR
Trigger: TCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCAGCACAAAGGAATTTaGGGTTGGACTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAQHKGI*GWTGAT
Trigger: AGTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELASPAP*PVQLAL
Trigger: CAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELLRLLL*RLVSLR
Trigger: TCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGCCACTCCCTCAGGATaGGTCATCTCGTCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELATPSG*VISSSD
Trigger: GTCGGAGGACGAGATGACCCATCCTGAGGGAGTGGC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTATCCACCACCTTTTCTaGTTTTGCTCTGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAIHHLF*FCSGPL
Trigger: GAGAGGACCAGAGCAAAACCAGAAAAGGTGGTGGAT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTAACTCACCCTTTTCCTaGGATCTGATGTTTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGNSPFS*DLMFRG
Trigger: ACCCCTAAACATCAGATCCCAGGAAAAGGGTGAGTT...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGTGGGGAGGGAGACTaGGATTTTTCCTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGGEGD*DFSSKL
Trigger: AAGTTTGGAGGAAAAATCCCAGTCTCCCTCCCCACC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTTTCAACACCCTTCTaGGTGGAGCATTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLSTPF*VEHSGS
Trigger: ACTGCCTGAATGCTCCACCCAGAAGGGTGTTGAAAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTGGTGTTGCTATCTCTaGAGACTCCAGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAWCCYL*RLQGSE
Trigger: CTCTGAGCCCTGGAGTCTCCAGAGATAGCAACACCA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAAGGACCTGCAGCTGTaGCCCAGATGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELKDLQL*PRWSCS
Trigger: GCTGCAGCTCCATCTGGGCCACAGCTGCAGGTCCTT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRGAHHC*LGLQQA
Trigger: TGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACGGGAGTCATCGGCATaGAGATCCACAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELRESSA*RSTTAS
Trigger: GGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCAGCTGGCCTAAAGTaGAGGGACGAACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSAGLK*RDEPGW
Trigger: CCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTGCTCTGCCTCCTTCTaGACAATTTGGCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWCSASF*TIWLSV
Trigger: GACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGAGCTCTTTCGGGGTaGATGTGTGCTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGALSG*MCAELQ
Trigger: CTGGAGCTCAGCACACATTCACCCCGAAAGAGCTCC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCAGTGAGCTTTTCTaGGCCAGAGGCAGGACACTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGSELF*ARGRTL
Trigger: GAGTGTCCTGCCTCTGGCTCAGAAAAGCTCACTGCC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGATTCTCCTGGCCCTCTaGGGGTACTACCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRILLAL*GYYLSD
Trigger: GTCACTCAGGTAGTACCCGCAGAGGGCCAGGAGAAT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWTFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELFDSGF*CGAWCL
Trigger: GAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTGCTTTTCCAGATACTaGTTTATGAAGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRRNAGWRENERGTLVIPCFSRY*FMKLFW
Trigger: CCAGAACAGCTTCATAAAGCAGTATCTGGAAAAGCA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAATTTGGGGTTGGACTaGGGCCACTTGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELNLGLD*GHLTPC
Trigger: GCACGGGGTCAAGTGGCCCCAGTCCAACCCCAAATT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGCTGGAATGCAGCATaGGGTGTTGAGTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGWNAA*GVECFC
Trigger: ACAAAAACACTCAACACCCCATGCTGCATTCCAGCC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTTTATGAAGCTGTTCTaGCTCATTTCCTCCCCGATC +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAFMKLF*LISSPI
Trigger: GATCGGGGAGGAAATGAGCCAGAACAGCTTCATAAA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCACACTGTCAGGAGATaGAGATCTGGATGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAHTVRR*RSGWRA
Trigger: AGCTCTCCATCCAGATCTCCATCTCCTGACAGTGTG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIARRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWRRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGATGAGGCTCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIADEALE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGAGCCTCATC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGATGAGGCTCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWDEALE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGAGCCTCATC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCGGGTACTACCTGAGTaGCTGTCCGGCATATCTTCA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRRVLPE*LSGISS
Trigger: TGAAGATATGCCGGACAGTCACTCAGGTAGTACCCG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCTGCGGGTACTACCTaGGTGACTGTCCGGCATATC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSAGTT*VTVRHI
Trigger: GATATGCCGGACAGTCACTCAGGTAGTACCCGCAGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACTGTTCAGGCTGCTCTaGAAATCAGGAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELLFRLL*KSGGSR
Trigger: CCTGCTGCCTCCTGATTTTCAGAGCAGCCTGAACAG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCTGTCTAACTCTGGATaGTCGTCTTTCCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWLSNSG*SSFPFP
Trigger: AGGAAAGGGGAAAGACGATCATCCAGAGTTAGACAG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAACAGCCTCCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIANSLLE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGGAGGCTGTT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAATTCTCCTGGCCCTCTaGGGGTACTACCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELILLAL*GYYLSD
Trigger: GTCACTCAGGTAGTACCCGCAGAGGGCCAGGAGAAT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCTTCCTCTTCCCTCTaGCCATTCTCCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSSSSL*PFSWPS
Trigger: AGAGGGCCAGGAGAATGGGCAGAGGGAAGAGGAAGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRCSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAIDAGS*LSLTEE
Trigger: CTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTAT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTGGGCTCCATCTCTCTaGTTAGATCCTGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRWAPSL*LDPGDD
Trigger: GTCGTCTCCAGGATCTAAGCAGAGAGATGGAGCCCA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATGGATCACGTGCTGTTaGTCTGGCTCAGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELWITCC*SGSGWL
Trigger: GAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCAGCTGGTGGCTCTaGCTCTTCAGCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGSWWL*LFSFTL
Trigger: AAGTGTGAAGCTGAAGAGGCAGAGCCACCAGCTGCC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTTCTCCCCCTGGAAGTaGTGTTTATCCCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAFSPWK*CLSLWQ
Trigger: TTGCCAAAGGGATAAACAGCACTTCCAGGGGGAGAA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATTCAGCACCACCCTCTaGGCGCTCATCATTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELFSTTL*ALIIAD
Trigger: GTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATANNSFS*PKVKGR
Trigger: TCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATT...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATTCTGCTGTGGCGCTTaGTGTCTCTGCGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELFCCGA*CLCDPS
Trigger: AGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCCTCAGGTTTCTAGATaGTGTCTCTTGATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHPQVSR*CLLILF
Trigger: GAAGAGGATCAAGAGACACCATCTAGAAACCTGAGG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGAGCCTTCTCCTTTaGTTCAAGGACCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELGSLLL*FKDLQL
Trigger: CAGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIADFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWDFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GEGQVPRVRLGNREIATAQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTACGTCACAAAGCAATaGGATTTGATCTTGTCTATC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSYVTKQ*DLILSI
Trigger: GATAGACAAGATCAAATCTCATTGCTTTGTGACGTA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTACGTCACAAAGCAATaGGATTTGATCTTGTCTATC +
Preference number: 4 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGYVTKQ*DLILSI
Trigger: GATAGACAAGATCAAATCTCATTGCTTTGTGACGTA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTTCCTCCAAACTTTGTaGAGACTTTACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSFLQTL*RLYLIF
Trigger: GAAAATGAGGTAAAGTCTTCACAAAGTTTGGAGGAA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATTCCTCCAAACTTTGTaGAGACTTTACCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGFLQTL*RLYLIF
Trigger: GAAAATGAGGTAAAGTCTTCACAAAGTTTGGAGGAA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCACTGTTTCCAGCTTaGACCCCCTTGGTAGAGACA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSLFPA*TPLVET
Trigger: TGTCTCTACCAAGGGGGTGCAAGCTGGAAACAGTGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022794.14
ENSMUST00000141453.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATGCTCCCTGTTCCTCTaGCTTAGTTTCAGATGGCCG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELCSLFL*LSFRWP
Trigger: CGGCCATCTGAAACTAAGGCAGAGGAACAGGGAGCA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp CCAAGAAGCTTGGCTAACAGTTTCTCAAACCCACAAGCTCTAGTTCCTGCCTGGCTTTTCTTTAGATTTTaGTCGCTCTTTCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PRSLANSFSNPQALVPAWLFFRF*SLFPAA
Trigger: CGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAAAAG...CCAGGCAGGAACTAGAGCTTGTGGGTTTGAGAAACTGTTAGCCAAGCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTTTCACTGGTGTCCATaGTCACTTCCTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAFHWCP*SLPPSL
Trigger: AAGAGAAGGAGGAAGTGACCATGGACACCAGTGAAA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACAGCACAAAGGAATTTaGGGTTGGACTGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELQHKGI*GWTGAT
Trigger: AGTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp ATTTCTCCCAGAAAGCCCTTGCCACAAAAGCCAGACAACTTAGTTCAGCCCTGGGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: ISPRKPLPQKPDNLVQPWAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...CCAGGGCTGAACTAAGTTGTCTGGCTTTTGTGGCAAGGGCTTTCTGGGAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTTTATGAAGCTGTTCTaGCTCATTTCCTCCCCGATC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWFMKLF*LISSPI
Trigger: GATCGGGGAGGAAATGAGCCAGAACAGCTTCATAAA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAACTCACCCTTTTCCTaGGATCTGATGTTTAGGGGT +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIANSPFS*DLMFRG
Trigger: ACCCCTAAACATCAGATCCCAGGAAAAGGGTGAGTT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGGTGGGGAGGGAGACTaGGATTTTTCCTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRGGEGD*DFSSKL
Trigger: AAGTTTGGAGGAAAAATCCCAGTCTCCCTCCCCACC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCGGAGATTTTCCTCTTaGATGACTTGGGCATCGAAC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRRRFSS*MTWASN
Trigger: GTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGATGAGGCTCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRDEALE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGAGCCTCATC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATGCTCTGCCTCCTTCTaGACAATTTGGCTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELCSASF*TIWLSV
Trigger: GACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELTFFTS*STGGGK
Trigger: CTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCCGTTCAGCTTGCTCTaGCTCCTTCTGAACAATTTG +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRPFSLL*LLLNNL
Trigger: CAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCTCTTCACCTGCTCTaGTGTCTGAGAACATCATTA +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSLHLL*CLRTSL
Trigger: TAATGATGTTCTCAGACAGCAGAGCAGGTGAAGAGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSSLLT*SATGRG
Trigger: TCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWNNSFS*PKVKGR
Trigger: TCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGCAGGTGGCTCCTCCTaGGCTTTTTCTTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRAGGSS*AFSFFS
Trigger: TGAAAAGAAAGAAAAAGCCCAGGAGGAGCCACCTGC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRDFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCAAAGCAATGAGATTTaGTCTTGTCTATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAQSNEI*SCLSRR
Trigger: CCTTCTGGATAGACAAGATCAAATCTCATTGCTTTG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAACAGCCTCCTTGAGTaGCTCAGTGGTGATACTGAT +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELNSLLE*LSGDTD
Trigger: ATCAGTATCACCACTGAGTCACTCAAGGAGGCTGTT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS-3UTR GCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACCGTTCAGCTTGCTCTaGCTCCTTCTGAACAATTTG +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELPFSLL*LLLNNL
Trigger: CAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR GCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTGCTTTTCCAGATACTaGTTTATGAAGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWCFSRY*FMKLFW
Trigger: CCAGAACAGCTTCATAAAGCAGTATCTGGAAAAGCA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR TCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGATTTTCCTCTTGAATaGCTTGGGCATCGAACTCTC +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELDFPLE*LGHRTL
Trigger: GAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATC...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTACGTCACAAAGCAATaGGATTTGATCTTGTCTATC +
Preference number: 4 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWYVTKQ*DLILSI
Trigger: GATAGACAAGATCAAATCTCATTGCTTTGTGACGTA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRNNSFS*PKVKGR
Trigger: TCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
3UTR CAA 72 bp CGCATTGCTTGGCTAACGAATCAAGCTCCAAGAAGCTaGGCTAACAGTTTCTCAAACCCACAAGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: RIAWLTNQAPRS*ANSFSNPQALV
Trigger: AACTAGAGCTTGTGGGTTTGAGAAACTGTTAGCCAAGCTTCTTGGAGCTTGATTCGTTAGCCAAGCAATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CCA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: SSLSDLTGRKERAKFQELNNSFS*PKVKGR
Trigger: TCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR TCA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTACGTCACAAAGCAATaGGATTTGATCTTGTCTATC +
Preference number: 4 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRYVTKQ*DLILSI
Trigger: GATAGACAAGATCAAATCTCATTGCTTTGTGACGTA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS GCA 90 bp GGCGCCCACCCCGGTCCCGTACAGGTGTGCTTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTCTGCGATCCCTCTCCCTGCCTCGGT +
Preference number: 5 (lower is better)
Translates to: GAHPGPVQVCFDSGF*CGAWCLCDPSPCLG
Trigger: ACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACCGGGGTGGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 90 bp CCTCGCTGCTCCAGTGCGGCCTTCAGGTCGGTCACCCGCAGAGCCTaGAGAGGCTTCCCGTCCAGAGTCACCTCCTCCAGCTCCGCCATC +
Preference number: 5 (lower is better)
Translates to: PRCSSAAFRSVTRRA*RGFPSRVTSSSSAI
Trigger: GATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGAAGCCTCTTCAGGCTCTGCGGGTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp CGAGTCCTCTCCCGGCGCTCCATTTCCCGTTCCCGTTCTGCCCATTaGTCTCGAACAGCCCTTTCCTGCTCCCGCTGCTCAGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: RVLSRRSISRSRSAH*SRTALSCSRCSARG
Trigger: CCCCCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGAGAGGACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp CCACCCCGGTCCCGTACAGGTGTGCTTCGACTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGATCCCTCTCCCTGCCTCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: PPRSRTGVLRLRLLL*RLVSLRSLSLPRSR
Trigger: CCGAGACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACCGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp GAAGAGGCTTCCCGTCCAGAGTCACCTCCTCCAGCTCCGCCATCTTaGGTGAGGTACTCGGGTCCGTCCCGACGGCTTCGGGCATCTTCG +
Preference number: 5 (lower is better)
Translates to: EEASRPESPPPAPPS*VRYSGPSRRLRASS
Trigger: CGAAGATGCCCGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGAAGCCTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
CDS CCA 90 bp GGTCCCGTACAGGTGTGCTTCGACTCCGGCTTCTGCTGTGGCGCTTaGTGTCTCTGCGATCCCTCTCCCTGCCTCGGTCTCGGTCTCGCT +
Preference number: 5 (lower is better)
Translates to: GPVQVCFDSGFCCGA*CLCDPSPCLGLGLA
Trigger: AGCGAGACCGAGACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp CTCAGACCGAGTCCTCTCCCGGCGCTCCATTTCCCGTTCCCGTTCTaGCCATTGCTCTCGAACAGCCCTTTCCTGCTCCCGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LRPSPLPALHFPFPF*PLLSNSPFLLPLLS
Trigger: GCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGAGAGGACTCGGTCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp ACTTCGTGCTCCACAGGTGGGGGCAAGGCAACCTCCACTGACACCTaGGGTGGCGCCGGCAGCTCGGCTTCAGGCTCTTTCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSCSTGGGKATSTDT*GGAGSSASGSFSSS
Trigger: GGAAGAAGAGAAAGAGCCTGAAGCCGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp TCTAGCATTAGAGCCCCTTTGAGCCGCTTGACCAGGGCACTCTTCTaGCCGCTCTTGGCTAGGCCTCGCTGCTCCAGTGCGGCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSIRAPLSRLTRALF*PLLARPRCSSAAFR
Trigger: CCTGAAGGCCGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp TTTGGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCACGTGCTGTTaGTCTGGCTCAGGATGGCTCAGATGCCTCCCCCGGACAGATGCT +
Preference number: 5 (lower is better)
Translates to: FGLPCSGCNLWITCC*SGSGWLRCLPRTDA
Trigger: AGCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp CACTTCTTTGGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCACGTaGTGTTGCTCTGGCTCAGGATGGCTCAGATGCCTCCCCCGGACA +
Preference number: 5 (lower is better)
Translates to: HFFGLPCSGCNLWIT*CCSGSGWLRCLPRT
Trigger: TGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS TCA 90 bp TTTCTTTACTTCGTGCTCCACAGGTGGGGGCAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGGCAGCTCGGCTTCAGGCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FLYFVLHRWGQGNLH*HLGWRRQLGFRLFL
Trigger: GAGAAAGAGCCTGAAGCCGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 90 bp GGAAGCCACTCCCTCAGGATGGGTCATCTCGTCCTCCGACTCAGCTaGGGCTTCTTCAAGTTCCGCAGCCTCCCGAGCTTCCCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GSHSLRMGHLVLRLS*GFFKFRSLPSFPFQ
Trigger: CTGGAACGGGAAGCTCGGGAGGCTGCGGAACTTGAAGAAGCCTCAGCTGAGTCGGAGGACGAGATGACCCATCCTGAGGGAGTGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCGCTTCTCCCGCTCCTaGGCCCGTTCAGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPRFSRS*ARSACS
Trigger: AGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTCTTCTGCCCGCTCTaGGCTAGGCCTCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLFCPL*ARPRCS
Trigger: GGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS CCA 90 bp CTGTGTGGCAGCTGGTGGCTCTGCCTCTTCAGCTTCACACTTCTTTaGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCACGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: LCGSWWLCLFSFTLL*APLLRLQPLDHVLL
Trigger: CAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTGAAGAGGCAGAGCCACCAGCTGCCACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCGCTTCTCCCGCTCCTaGGCCCGTTCAGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGRFSRS*ARSACS
Trigger: AGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCGCTTCTCCCGCTCCTaGGCCCGTTCAGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSRFSRS*ARSACS
Trigger: AGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACGCTTCTCCCGCTCCTaGGCCCGTTCAGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGRFSRS*ARSACS
Trigger: AGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGCCCCTTTGAGCCGCTaGACCAGGGCACTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGAPLSR*TRALFC
Trigger: GCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACAGCTTCACACTTCTTaGGGCTCCCCTGCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTQLHTS*GSPAPA
Trigger: AGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 90 bp TTCTTTAGATTTTGCTCGCTCTTTCCGGCGGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTCTCGAACTTTGTCCCGATCCCATTC +
Preference number: 5 (lower is better)
Translates to: FFRFCSLFPAAVTGP*SGAGSLSNFVPIPF
Trigger: GAATGGGATCGGGACAAAGTTCGAGAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGCCGCCGGAAAGAGCGAGCAAAATCTAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp GAGGAGGACCTGCTAGAGGATGAGTCGGCTGACTGCTTCCCACTGTaGTCTGGGAAGAGAGCATGGGAGGCTCTTCTGCCCTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: EEDLLEDESADCFPL*SGKRAWEALLPSFC
Trigger: ACAGAAGGAGGGCAGAAGAGCCTCCCATGCTCTCTTCCCAGAGCACAGTGGGAAGCAGTCAGCCGACTCATCCTCTAGCAGGTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp TCTGCCTCTTCAGCTTCACACTTCTTTGGGCTCCCCTGCTCCGGCTaGAACCTCTGGATCACGTGCTGTTGCTCTGGCTCAGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: SASSASHFFGLPCSG*NLWITCCCSGSGWL
Trigger: GAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTGAAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 90 bp TCAGCTTCACACTTCTTTGGGCTCCCCTGCTCCGGCTGCAACCTCTaGATCACGTGCTGTTGCTCTGGCTCAGGATGGCTCAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: SASHFFGLPCSGCNL*ITCCCSGSGWLRCL
Trigger: GAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAACAATGTTACTGATCTaGCCCCTGGGTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTTMLLI*PLGGEG
Trigger: GCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTLGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLLLWR*VSLRSL
Trigger: GAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLLLWR*VSLRSL
Trigger: GAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAAGCATTAGAGCCCCTTaGAGCCGCTTGACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTSIRAP*SRLTRA
Trigger: TGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCT...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCTGGATCACGTGCTGTaGCTCTGGCTCAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPLDHVL*LWLRMA
Trigger: AGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS GCA 90 bp CCTGGAGCCCATCTTGGGTCTCTCGTGAGGGTTGGCATGAACTCGTaGTTGGGCTCCATCTCTCTGCTTAGATCCTGGAGACGACTGTGG +
Preference number: 5 (lower is better)
Translates to: PGAHLGSLVRVGMNS*LGSISLLRSWRRLW
Trigger: CCACAGTCGTCTCCAGGATCTAAGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCCAACCCTCACGAGAGACCCAAGATGGGCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp AACCTCTGGATCACGTGCTGTTGCTCTGGCTCAGGATGGCTCAGATaGCTCCCCCGGACAGATGCTGAGAACGTGGGAGCCTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: NLWITCCCSGSGWLR*LPRTDAENVGAFSF
Trigger: AAAGGAGAAGGCTCCCACGTTCTCAGCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTACAATGTTACTGATCTaGCCCCTGGGTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSTMLLI*PLGGEG
Trigger: GCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACAGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCGCTTCTCCCGCTCCTaGGCCCGTTCAGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHRFSRS*ARSACS
Trigger: AGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCCCCGATCTGTGAATTaGGCTGGAATGCAGCATGGG +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPPRSVN*AGMQHG
Trigger: CCCATGCTGCATTCCAGCCAAATTCACAGATCGGGG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTGGATCACGTGCTGTaGCTCTGGCTCAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLDHVL*LWLRMA
Trigger: AGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCAGCTTCACACTTCTTaGGGCTCCCCTGCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATAQLHTS*GSPAPA
Trigger: AGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 90 bp CCATTACGCTCTGTCTCATCCTCAGAGATTCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCCTGCCCCGCCAGGGGTTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: PLRSVSSSEIRESSA*RSTTASCPARGLMS
Trigger: CGACATCAAACCCCTGGCGGGGCAGGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCGAATCTCTGAGGATGAGACAGAGCGTAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 90 bp GTAGTACCTGACAAAGGAGACAGGCTTCTTAGCAGCTGCGCAGGGTaGGGAGACGCTAGTGGCTCCCTGGCTCCAGCATCTGTGTTAGGA +
Preference number: 5 (lower is better)
Translates to: VVPDKGDRLLSSCAG*GDASGSLAPASVLG
Trigger: TCCTAACACAGATGCTGGAGCCAGGGAGCCACTAGCGTCTCCTCACCCTGCGCAGCTGCTAAGAAGCCTGTCTCCTTTGTCAGGTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp TGGTGTTGCTATCTCTGGAGACTCCAGGGCTCAGAGATTTTCTGCTaGTGCTTGACGCGGAACGGGAACGAGATCGGGAACGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: WCCYLWRLQGSEIFC*CLTRNGNEIGNVTW
Trigger: CCAGGTCACGTTCCCGATCTCGTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCCCTGGAGTCTCCAGAGATAGCAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 90 bp ACTGATCTTGCCCCTGGGTGGGGAGGGCACCTGGGCGGTCCGGACTaGGTCATCAATTGTAATGGAAACTCCAGACTTCTGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: TDLAPGWGGHLGGPD*VINCNGNSRLLLAD
Trigger: ATCAGCCAACAGAAGTCTGGAGTTTCCATTACAATTGATGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp ATCGGGAACGTGACCTGGACTCTGAAGTTGACCTGGAGCCCATCTTaGGTCTCTCGTGAGGGTTGGCATGAACTCGTGCTTGGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: IGNVTWTLKLTWSPS*VSREGWHELVLGLH
Trigger: ATGGAGCCCAAGCACGAGTTCATGCCAACCCTCACGAGAGACCCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGTCACGTTCCCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 90 bp GGGAGCCTTCTCCTTTGGTTCAAGGACCTGCAGCTGTGGCCCAGATaGAGCTGCAGCCTCCTGACCACAAGAGGGATCTTTGGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: GSLLLWFKDLQLWPR*SCSLLTTRGIFGFS
Trigger: ACTGAAACCAAAGATCCCTCTTGTGGTCAGGAGGCTGCAGCTCCATCTGGGCCACAGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTLIIAD*VCNRQR
Trigger: CCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTSGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGAAACTCCAGACTTCTGTaGGCTGATGGACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGNSRLL*ADGPPG
Trigger: ACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTT...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTAACTCCAGACTTCTGTaGGCTGATGGACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSNSRLL*ADGPPG
Trigger: ACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCAGCACAAAGGAATTaGGGGTTGGACTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSAQRN*GLDWGH
Trigger: GTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAACCCACAAGCTCTAGTTCCTGCCTGGCGGCCACTTTCACCCTCTCCACAGCTGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: KPTSSSSCLAATFTLSTAGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...AGCTGTGGAGAGGGTGAAAGTGGCCGCCAGGCAGGAACTAGAGCTTGTGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATALGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLLLWR*VSLRSL
Trigger: GAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTTCGAACGGACCGGATaGGCCCCGCCCACTGCCATA +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWFERTG*APPTAI
Trigger: TATGGCAGTGGGCGGGGCCAATCCGGTCCGTTCGAA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022793.15
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTCCAGCTCCGCCATCTaGCGTGAGGTACTCGGGTCC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIASSSAI*REVLGS
Trigger: GGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022793.15
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTGGCATGAACTCGTGCTaGGGCTCCATCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGGMNSC*GSISLL
Trigger: AAGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCC...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS GCA 90 bp ACTCACTTGGCTCTCAGTCAGAGGGAGCCAATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAGGTCATCCAGCAGCTTGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: THLALSQREPIDAGS*LSLTEEVIQQLGRW
Trigger: CCACCTGCCAAGCTGCTGGATGACCTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTATTGGCTCCCTCTGACTGAGAGCCAAGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS CCA 90 bp TCCTCTTCTTCAGCACCACCCTCTGGGCGCTCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGAGGCTCAGGCACCTCATTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SSSSAPPSGRSSLLT*SATGRGGSGTSFSG
Trigger: ACCTGAAAATGAGGTGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAAGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp ATGTGGACAATGTTACTGATCTTGCCCCTGGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCATCAATTGTAATGGAAACTCCAGAC +
Preference number: 5 (lower is better)
Translates to: MWTMLLILPLGGEGT*AVRTGSSIVMETPD
Trigger: GTCTGGAGTTTCCATTACAATTGATGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGTCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp AACCAGGTTGGAGATGTGGACAATGTTACTGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGTCCGGACTGGGTCATCAATTGTAAT +
Preference number: 5 (lower is better)
Translates to: NQVGDVDNVTDLAPG*GGHLGGPDWVINCN
Trigger: ATTACAATTGATGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGTCCACATCTCCAACCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGSGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGTCACTGTTTCCAGCTaGCACCCCCTTGGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATAVTVSS*HPLGRD
Trigger: GTCTCTACCAAGGGGGTGCAAGCTGGAAACAGTGAC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022794.14
ENSMUST00000141453.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATAGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTLLLNN*ALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAG...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHLGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWLLLWR*VSLRSL
Trigger: GAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCTCTTCTGCCCGCTCTaGGCTAGGCCTCGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRLFCPL*ARPRCS
Trigger: GGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGAGATGACGCTTCCTaGGTAAGTAAAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSGDDAS*VSKGGG
Trigger: ACCCCCACCTTTACTTACCAAGGAAGCGTCATCTCC...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTGGGAGCCTTCTCCTTaGGTTCAAGGACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATAWEPSP*VQGPAA
Trigger: AGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCCA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 90 bp CTTTCAACACCCTTCTGGGTGGAGCATTCAGGCAGTGAGCTTTTCTaGGCCAGAGGCAGGACACTCTCATCTGACACTCTCCCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LSTPFWVEHSGSELF*ARGRTLSSDTLPAG
Trigger: TCCAGCAGGGAGAGTGTCAGATGAGAGTGTCCTGCCTCTGGCTCAGAAAAGCTCACTGCCTGAATGCTCCACCCAGAAGGGTGTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp TTCTTCAGCACCACCCTCTGGGCGCTCATCATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTCAGGCACCTCATTTTCAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: FFSTTLWALIIADLV*NRQRRLRHLIFRSV
Trigger: AACAGACCTGAAAATGAGGTGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp GCAGCCTCCCGAGCTTCCCGTTCCAGGCGCTGCCTAAGTAGCTCCTaGTGCTTTTCCAGATACTGCTTTATGAAGCTGTTCTGGCTCATT +
Preference number: 5 (lower is better)
Translates to: AASRASRSRRCLSSS*CFSRYCFMKLFWLI
Trigger: AATGAGCCAGAACAGCTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGAAGCTCGGGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS GCA 90 bp GCTTCTTCAAGTTCCGCAGCCTCCCGAGCTTCCCGTTCCAGGCGCTaGCTAAGTAGCTCCTGCTGCTTTTCCAGATACTGCTTTATGAAG +
Preference number: 5 (lower is better)
Translates to: ASSSSAASRASRSRR*LSSSCCFSRYCFMK
Trigger: CTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGAAGCTCGGGAGGCTGCGGAACTTGAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS GCA 90 bp CTTCTCCTTTGGTTCAAGGACCTGCAGCTGTGGCCCAGATGGAGCTaGAGCCTCCTGACCACAAGAGGGATCTTTGGTTTCAGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: LLLWFKDLQLWPRWS*SLLTTRGIFGFSVA
Trigger: AGCTACACTGAAACCAAAGATCCCTCTTGTGGTCAGGAGGCTGCAGCTCCATCTGGGCCACAGCTGCAGGTCCTTGAACCAAAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 90 bp GATGAGTCGGCTGACTGCTTCCCACTGTGCTCTGGGAAGAGAGCATaGGAGGCTCTTCTGCCCTCCTTCTGTTCCAAAGACTGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: DESADCFPLCSGKRA*EALLPSFCSKDCFF
Trigger: GAAGAAACAGTCTTTGGAACAGAAGGAGGGCAGAAGAGCCTCCCATGCTCTCTTCCCAGAGCACAGTGGGAAGCAGTCAGCCGACTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATALIIAD*VCNRQR
Trigger: CCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTTCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATASGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATAHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGACAATGTTACTGATCTaGCCCCTGGGTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWTMLLI*PLGGEG
Trigger: GCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACAATGTTACTGATCTaGCCCCTGGGTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIATMLLI*PLGGEG
Trigger: GCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCAAGGGACGAACCAGGTaGGAGATGTGGACAATGTTA +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPKGRTR*EMWTML
Trigger: TAACATTGTCCACATCTCCAACCTGGTTCGTCCCTT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCCACAAAAGCCAGACAACTTAGTTCAGCCCTGGAGTCCATGGAGAGGTGGAAGTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ATKARQLSSALESMERWKFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...CTTCCACCTCTCCATGGACTCCAGGGCTGAACTAAGTTGTCTGGCTTTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138321.2
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTCTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSLLLNN*ALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAG...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTCTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLLLNN*ALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAG...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGLLLNN*ALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAG...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIALGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAGCATTAGAGCCCCTTaGAGCCGCTTGACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIASIRAP*SRLTRA
Trigger: TGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCCCCGATCTGTGAATTaGGCTGGAATGCAGCATGGG +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHPRSVN*AGMQHG
Trigger: CCCATGCTGCATTCCAGCCAAATTCACAGATCGGGG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTCTAGATGGTGTCTCTaGATCCTCTTCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGSRWCL*ILFLLS
Trigger: GCTGAGGAGGAAGAGGATCAAGAGACACCATCTAGA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATGGCATGAACTCGTGCTaGGGCTCCATCTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHGMNSC*GSISLL
Trigger: AAGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCC...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATCCACAACAGCCTCCTaGAGTGACTCAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGSTTAS*SDSVVI
Trigger: TATCACCACTGAGTCACTCAAGGAGGCTGTTGTGGA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS GCA 90 bp GACCTCCGGGTTAAGGTATCTCCTAATGTTACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAGGCAACCTCCACTGACACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: DLRVKVSPNVTFFTS*STGGGKATSTDTWG
Trigger: ACCCCAGGTGTCAGTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGTAACATTAGGAGATACCTTAACCCGGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp AACAATTTGGCTCTCAGTCAGAGGGAGCCAATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAGGTCATCCAGCAGCTTGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NNLALSQREPIDAGS*LSLTEEVIQQLGRW
Trigger: CCACCTGCCAAGCTGCTGGATGACCTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTATTGGCTCCCTCTGACTGAGAGCCAAATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 90 bp AGTAAAGGTGGGGGTGTTTCCTCTTCACTGACTATCTGTTCTGGCTaGAGCACAACAGGGGCCTTCTCTAGGTCTTCAGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SKGGGVSSSLTICSG*STTGAFSRSSGSGG
Trigger: ACCTCCGCTTCCTGAAGACCTAGAGAAGGCCCCTGTTGTGCTGCAGCCAGAACAGATAGTCAGTGAAGAGGAAACACCCCCACCTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 90 bp TTTCCTTCAAGTTCCGCAGCCTCCCGAGCTTCCCGTTCCAGGCGCTaGCTAAGTAGCTCCTGCTGCTTTTCCAGATACTGCTTTATGAAG +
Preference number: 5 (lower is better)
Translates to: FPSSSAASRASRSRR*LSSSCCFSRYCFMK
Trigger: CTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGAAGCTCGGGAGGCTGCGGAACTTGAAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000111484.9
ENSMUST00000125265.2
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATTCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHSGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GCTGAGTACCAAGGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACATTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: AEYQGRRNAGWRENERGTFLLND*GIELSF
Trigger: GAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAA...TGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCCTTGGTACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGAACTCCAGACTTCTGTaGGCTGATGGACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWNSRLL*ADGPPG
Trigger: ACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTAAGGGACGAACCAGGTaGGAGATGTGGACAATGTTA +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSKGRTR*EMWTML
Trigger: TAACATTGTCCACATCTCCAACCTGGTTCGTCCCTT...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCAGCACAAAGGAATTaGGGGTTGGACTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSAQRN*GLDWGH
Trigger: GTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGPSRT*SRSHSL
Trigger: GAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GEGQVPRVRLGNREIATALLLNN*ALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAG...AGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTGGCAGGTTTGTGTCTCTTTCTCTaGTTGCTGTCTGGCCAGATG +
Preference number: 5 (lower is better)
Translates to: VTVPIPLWPLTSQDQVAGLCLFL*LLSGQM
Trigger: CATCTGGCCAGACAGCAACAAGAGAAAGAGACACAA...ACCTGCCACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCCATCTCTTCCTGGAGTaGTATATGAGTTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPHLFLE*YMSWWR
Trigger: TCTCCACCAACTCATATACAACTCCAGGAAGAGATG...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGACCTGGACTCTGAAGTaGACCTGGAGCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWTWTLK*TWSPSW
Trigger: CCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGT...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACCTGGACTCTGAAGTaGACCTGGAGCCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIATWTLK*TWSPSW
Trigger: CCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTGGGAGCCTTCTCCTTaGGTTCAAGGACCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWWEPSP*VQGPAA
Trigger: AGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCCA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGTGCTGTTTATCCCTTaGGCAAACCCCGAGTTCGGC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAVLFIP*ANPEFG
Trigger: GCCGAACTCGGGGTTTGCCAAAGGGATAAACAGCAC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS GCA 90 bp GGTCCTCTCTTCCCCTTCTTCATCCTCAAACTGCTTCAGGGTTGGTaGCTCAGCCTCTCTAGATTTCTGTGCCTCATCTACCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GPLFPFFILKLLQGW*LSLSRFLCLIYLLF
Trigger: GAAGAGGAGGTAGATGAGGCACAGAAATCTAGAGAGGCTGAGGCACCAACCCTGAAGCAGTTTGAGGATGAAGAAGGGGAAGAGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CCA 90 bp ATTCTAGCAGATGAGAGATCTGAGTCTCTGAGGTTTGAGGCTGTGTaGCAGCTGGTGGCTCTGCCTCTTCAGCTTCACACTTCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: ILADERSESLRFEAV*QLVALPLQLHTSLG
Trigger: GCCCAAAGAAGTGTGAAGCTGAAGAGGCAGAGCCACCAGCTGCCACACAGCCTCAAACCTCAGAGACTCAGATCTCTCATCTGCTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWLIIAD*VCNRQR
Trigger: CCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCAGGGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGATTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: FQGGGDCTYPSVAFDLPGFLLND*GIELSF
Trigger: GAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAA...TCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp GGTGGTGGTGACTGTACCTATCCCTCTGTGGCCTTTGACCTCCCAGGACCAAGTTTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GGGDCTYPSVAFDLPGPSFLLND*GIELSF
Trigger: GAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAA...ACTTGGTCCTGGGAGGTCAAAGGCCACAGAGGGATAGGTACAGTCACCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGCATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGACAATGTTACTGATCTaGCCCCTGGGTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRTMLLI*PLGGEG
Trigger: GCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRLGPFS*LCLLLN
Trigger: GTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTC +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELLLLWR*VSLRSL
Trigger: GAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCGGAGATGACGCTTCCTaGGTAAGTAAAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAGDDAS*VSKGGG
Trigger: ACCCCCACCTTTACTTACCAAGGAAGCGTCATCTCC...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 90 bp CCATTACGCTCTGTCTCATCCTCAGAGATTCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCCTTGAGTGACTCAGTGGTGATACTG +
Preference number: 5 (lower is better)
Translates to: PLRSVSSSEIRESSA*RSTTASLSDSVVIL
Trigger: CAGTATCACCACTGAGTCACTCAAGGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCGAATCTCTGAGGATGAGACAGAGCGTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000123875.2
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS CCA 90 bp GCCTCTTCCACCAAAGTTCCTGTACGCCCCAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGAACCAGGTTGGAGATGTGGACAATG +
Preference number: 5 (lower is better)
Translates to: ASSTKVPVRPNNSFS*PKVKGRTRLEMWTM
Trigger: CATTGTCCACATCTCCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATTGGGGCGTACAGGAACTTTGGTGGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 90 bp TTTGTTCTTCTTCTTCTCGTTCTTTTCGCCGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTGCCTCCTTCTGAACAATTTGGCTCT +
Preference number: 5 (lower is better)
Translates to: FVLLLLVLFAASPAP*PVQLALPPSEQFGS
Trigger: AGAGCCAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCGGCGAAAAGAACGAGAAGAAGAAGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGGTCACTGTTTCCAGCTaGCACCCCCTTGGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRVTVSS*HPLGRD
Trigger: GTCTCTACCAAGGGGGTGCAAGCTGGAAACAGTGAC...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022794.14
ENSMUST00000141453.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGAACTCCAGACTTCTGTaGGCTGATGGACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRNSRLL*ADGPPG
Trigger: ACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATAAGGGACGAACCAGGTaGGAGATGTGGACAATGTTA +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHKGRTR*EMWTML
Trigger: TAACATTGTCCACATCTCCAACCTGGTTCGTCCCTT...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTCAGCACAAAGGAATTaGGGGTTGGACTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRSAQRN*GLDWGH
Trigger: GTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTGA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCTCTAGATGGTGTCTCTaGATCCTCTTCCTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIASRWCL*ILFLLS
Trigger: GCTGAGGAGGAAGAGGATCAAGAGACACCATCTAGA...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp GGGAGGCGGAACGCAGGATGGAGGGAAAATGAGCGTGGGACACTGGTTATTCCCAGGGAGAGAAACAATTaGTGTCTCTTTCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GRRNAGWRENERGTLVIPRERNN*CLFLLL
Trigger: CAACAAGAGAAAGAGACACAAATTGTTTCTCTCCCT...GGGAATAACCAGTGTCCCACGCTCATTTTCCCTCCATCCTGCGTTCCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGAGGAAGAGGGCCAGGTaGCTGGTAGTAAGCAGACTC +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRRKRAR*LVVSRL
Trigger: GAGTCTGCTTACTACCAGCAACCTGGCCCTCTTCCT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTCCACAACAGCCTCCTaGAGTGACTCAGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWSTTAS*SDSVVI
Trigger: TATCACCACTGAGTCACTCAAGGAGGCTGTTGTGGA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGCTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRLIIAD*VCNRQR
Trigger: CCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAG...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAACTCCAGACTTCTGTaGGCTGATGGACCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELNSRLL*ADGPPG
Trigger: ACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACAAAGGAATTTGGGGTaGGACTGGGGCCACTTGACC +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELQRNLG*DWGHLT
Trigger: GGTCAAGTGGCCCCAGTCCAACCCCAAATTCCTTTG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCAGCACAAAGGAATTaGGGGTTGGACTGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSAQRN*GLDWGH
Trigger: GTGGCCCCAGTCCAACCCCAAATTCCTTTGTGCTGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELFPFCP*LSNSPF
Trigger: GAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCACTGCTCCATCATCTCTTCCTGGAGTaGTATATGAGTTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RAKFQELGWGTGRLPLLHHLFLE*YMSWWR
Trigger: TCTCCACCAACTCATATACAACTCCAGGAAGAGATG...ATGGAGCAGTGGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGGCAGACTCTATTGTATaGGTAAAGCGGCAGCGATCA +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWADSIV*VKRQRS
Trigger: TGATCGCTGCCGCTTTACCAATACAATAGAGTCTGC...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELLIIAD*VCNRQR
Trigger: CCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATCTGGGCGCTCATCATaGCTGACTTGGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELSGRSS*LTWSAT
Trigger: TGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AGTTATAGTTCAGCACTGAGCAATGGTGTGAGACCCTTGGTTCCAGGGTGGTGGTTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SYSSALSNGVRPLVPGWWFLLND*GIELSF
Trigger: GAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAA...CCACCACCCTGGAACCAAGGGTCTCACACCATTGCTCAGTGCTGAACTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTACATATCTTCAGTCCCTaGTCATGGGTCCCATCGTCG +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELHIFSP*SWVPSS
Trigger: CGACGATGGGACCCATGACAAGGGACTGAAGATATG...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS CCA 90 bp AGTAGCTCCTGCTGCTTTTCCAGATACTGCTTTATGAAGCTGTTCTaGCTCATTTCCTCCCCGATCTGTGAATTTGGCTGGAATGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSSCCFSRYCFMKLF*LISSPICEFGWNAA
Trigger: TGCTGCATTCCAGCCAAATTCACAGATCGGGGAGGAAATGAGCCAGAACAGCTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGAAGGGACGAACCAGGTaGGAGATGTGGACAATGTTA +
Preference number: 5 (lower is better)
Translates to: FPLRLNRKKGEGQVPRVRKGRTR*EMWTML
Trigger: TAACATTGTCCACATCTCCAACCTGGTTCGTCCCTT...CCTAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS TCA 90 bp CTGACTGTACTCAGGGAGTTTAGATTTTGCCTGTCTAACTCTGGATaGTCGTCTTTCCCCTTTCCTCGGCTTCTCATCATCAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: LTVLREFRFCLSNSG*SSFPFPRLLIIRFS
Trigger: GGAGAATCTGATGATGAGAAGCCGAGGAAAGGGGAAAGACGATCATCCAGAGTTAGACAGGCAAAATCTAAACTCCCTGAGTACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CCA 90 bp GTCCGGACTGGGTCATCAATTGTAATGGAAACTCCAGACTTCTGTTaGCTGATGGACCTCCGGGTTAAGGTATCTCCTAATGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: VRTGSSIVMETPDFC*LMDLRVKVSPNVTF
Trigger: GAAAGTAACATTAGGAGATACCTTAACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTTTCCATTACAATTGATGACCCAGTCCGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAAAGGGACGAACCAGGTaGGAGATGTGGACAATGTTA +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELKGRTR*EMWTML
Trigger: TAACATTGTCCACATCTCCAACCTGGTTCGTCCCTT...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCAGGGAGAGAAACAATTaGTGTCTCTTTCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIARERNN*CLFLLL
Trigger: CAACAAGAGAAAGAGACACAAATTGTTTCTCTCCCT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS-3UTR CAA 90 bp TCTTCCCTCTCAGACTTAACAGGAAGAAAGGAGAGGGCCAAGTTCCAAGAGTTATTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SSLSDLTGRKERAKFQELFLLND*GIELSF
Trigger: GAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAA...TAACTCTTGGAACTTGGCCCTCTCCTTTCTTCCTGTTAAGTCTGAGAGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
CDS-3UTR CAA 90 bp AAGAAAGGAGAGGGCCAAGTTCCAAGAGTTAGGTTGGGGAACAGGGAGATTGCCATGCAGCATGGGGTGTaGAGTGTTTTTGTAAATTTT +
Preference number: 5 (lower is better)
Translates to: KKGEGQVPRVRLGNREIAMQHGV*SVFVNF
Trigger: AAAATTTACAAAAACACTCAACACCCCATGCTGCAT...GGCAATCTCCCTGTTCCCCAACCTAACTCTTGGAACTTGGCCCTCTCCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 72 bp TTCGTGCTCCACAGGTGGGGGCAAGGCAACCTCCACTaGCACCTGGGGTGGCGCCGGCAGCTCGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FVLHRWGQGNLH*HLGWRRQLGFR
Trigger: CCTGAAGCCGAGCTGCCGGCGCCACCCCAGGTGTCAGTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp CCGAGTCCTCTCCCGGCGCTCCATTTCCCGTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTCCTGCTCCCGCTGCTCAGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: PSPLPALHFPFPFCP*LSNSPFLLPLLSPG
Trigger: CCCCGGGCTGAGCAGCGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGAGAGGACTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp CGGCGGTCACGGGACCGTGATCGGGAGCGGGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTCTCAGACCGAGTCCTCTCCCGGCGC +
Preference number: 6 (lower is better)
Translates to: RRSRDRDRERGPSRT*SRSHSLSDRVLSRR
Trigger: GCGCCGGGAGAGGACTCGGTCTGAGAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp TCCCGTCCAGAGTCACCTCCTCCAGCTCCGCCATCTTaGGTGAGGTACTCGGGTCCGTCCCGACGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: SRPESPPPAPPS*VRYSGPSRRLR
Trigger: CCGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
CDS GCA 72 bp AGGGCACTCTTCTGCCCGCTCTTGGCTAGGCCTCGCTaGTCCAGTGCGGCCTTCAGGTCGGTCACCCGCAGA +
Preference number: 6 (lower is better)
Translates to: RALFCPLLARPR*SSAAFRSVTRR
Trigger: TCTGCGGGTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 90 bp CGGTCCCGTACAGGTGTGCTTCGACTCCGGCTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTCTCCCTGCCTCGGTCTCGGTCTCGC +
Preference number: 6 (lower is better)
Translates to: RSRTGVLRLRLLLWR*VSLRSLSLPRSRSR
Trigger: GCGAGACCGAGACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp AGAGCCCCTTTGAGCCGCTTGACCAGGGCACTCTTCTGCCCGCTCTaGGCTAGGCCTCGCTGCTCCAGTGCGGCCTTCAGGTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: RAPLSRLTRALFCPL*ARPRCSSAAFRSVT
Trigger: GGTGACCGACCTGAAGGCCGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS TCA 72 bp TTTTGCTCGCTCTTTCCGGCGGCGGTCACGGGACCGTaGTCGGGAGCGGGGTCCCTCTCGAACTTTGTCCCG +
Preference number: 6 (lower is better)
Translates to: FCSLFPAAVTGP*SGAGSLSNFVP
Trigger: CGGGACAAAGTTCGAGAGGGACCCCGCTCCCGATCACGGTCCCGTGACCGCCGCCGGAAAGAGCGAGCAAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 72 bp GTCCAGAGTCACCTCCTCCAGCTCCGCCATCTTGCGTaGGGTACTCGGGTCCGTCCCGACGGCTTCGGGCAT +
Preference number: 6 (lower is better)
Translates to: VQSHLLQLRHLA*GTRVRPDGFGH
Trigger: ATGCCCGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
CDS TCA 72 bp TCCAGTGCGGCCTTCAGGTCGGTCACCCGCAGAGCCTaGAGAGGCTTCCCGTCCAGAGTCACCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SSAAFRSVTRRA*RGFPSRVTSSS
Trigger: GCTGGAGGAGGTGACTCTGGACGGGAAGCCTCTTCAGGCTCTGCGGGTGACCGACCTGAAGGCCGCACTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp CCCGGTCCCGTACAGGTGTGCTTCGACTCCGGCTTCTaGTGTGGCGCTTGGTGTCTCTGCGATCCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PGPVQVCFDSGF*CGAWCLCDPSP
Trigger: GGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGACCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp AGAGCCCCTTTGAGCCGCTTGACCAGGGCACTCTTCTaGCCGCTCTTGGCTAGGCCTCGCTGCTCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: RAPLSRLTRALF*PLLARPRCSSA
Trigger: CGCACTGGAGCAGCGAGGCCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp TTCCCGTCCAGAGTCACCTCCTCCAGCTCCGCCATCTaGCGTGAGGTACTCGGGTCCGTCCCGACGGCTTCG +
Preference number: 6 (lower is better)
Translates to: FPSRVTSSSSAI*REVLGSVPTAS
Trigger: CGAAGCCGTCGGGACGGACCCGAGTACCTCACGCAAGATGGCGGAGCTGGAGGAGGTGACTCTGGACGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
CDS CAA 72 bp CCCCTGCTCCGGCTGCAACCTCTGGATCACGTGCTGTaGCTCTGGCTCAGGATGGCTCAGATGCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: PLLRLQPLDHVL*LWLRMAQMPPP
Trigger: CGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp TTCGACTCCGGCTTCTGCTGTGGCGCTTGGTGTCTCTaGGATCCCTCTCCCTGCCTCGGTCTCGGTCTCGCT +
Preference number: 6 (lower is better)
Translates to: FDSGFCCGAWCL*DPSPCLGLGLA
Trigger: AGCGAGACCGAGACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp GGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCACGTaGTGTTGCTCTGGCTCAGGATGGCTCAGATGCCTC +
Preference number: 6 (lower is better)
Translates to: GLPCSGCNLWIT*CCSGSGWLRCL
Trigger: GAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp CTCCCGGCGCTCCATTTCCCGTTCCCGTTCTGCCCATaGCTCTCGAACAGCCCTTTCCTGCTCCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPALHFPFPFCP*LSNSPFLLPLL
Trigger: GAGCAGCGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp CTTTGGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCACGTGCTGTaGCTCTGGCTCAGGATGGCTCAGATGCCTCCCCCGGACAGATGC +
Preference number: 6 (lower is better)
Translates to: LWAPLLRLQPLDHVL*LWLRMAQMPPPDRC
Trigger: GCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp TCCCGGCGCTCCATTTCCCGTTCCCGTTCTGCCCATTaGTCTCGAACAGCCCTTTCCTGCTCCCGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRRSISRSRSAH*SRTALSCSRCS
Trigger: TGAGCAGCGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp AGTCCTCTCCCGGCGCTCCATTTCCCGTTCCCGTTCTaGCCATTGCTCTCGAACAGCCCTTTCCTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SPLPALHFPFPF*PLLSNSPFLLP
Trigger: CGGGAGCAGGAAAGGGCTGTTCGAGAGCAATGGGCAGAACGGGAACGGGAAATGGAGCGCCGGGAGAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 72 bp GGAGATGTGGACAATGTTACTGATCTTGCCCCTGGGTaGGGAGGGCACCTGGGCGGTCCGGACTGGGTCATC +
Preference number: 6 (lower is better)
Translates to: GDVDNVTDLAPG*GGHLGGPDWVI
Trigger: GATGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATCAGTAACATTGTCCACATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 72 bp TCCCGTACAGGTGTGCTTCGACTCCGGCTTCTGCTGTaGCGCTTGGTGTCTCTGCGATCCCTCTCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: SRTGVLRLRLLL*RLVSLRSLSLP
Trigger: AGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGTACGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 72 bp CTCCGGCTGCAACCTCTGGATCACGTGCTGTTGCTCTaGCTCAGGATGGCTCAGATGCCTCCCCCGGACAGA +
Preference number: 6 (lower is better)
Translates to: LRLQPLDHVLLL*LRMAQMPPPDR
Trigger: TCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp CGGGACCGTGATCGGGAGCGGGGTCCCTCTCGAACTTaGTCCCGATCCCATTCTCTCTCAGACCGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: RDRDRERGPSRT*SRSHSLSDRVL
Trigger: GAGGACTCGGTCTGAGAGAGAATGGGATCGGGACAAAGTTCGAGAGGGACCCCGCTCCCGATCACGGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp ACAGGTGTGCTTCGACTCCGGCTTCTGCTGTGGCGCTaGGTGTCTCTGCGATCCCTCTCCCTGCCTCGGTCT +
Preference number: 6 (lower is better)
Translates to: TGVLRLRLLLWR*VSLRSLSLPRS
Trigger: AGACCGAGGCAGGGAGAGGGATCGCAGAGACACCAAGCGCCACAGCAGAAGCCGGAGTCGAAGCACACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp GGGGAGGAGGACCTGCTAGAGGATGAGTCGGCTGACTaGTTCCCACTGTGCTCTGGGAAGAGAGCATGGGAG +
Preference number: 6 (lower is better)
Translates to: GEEDLLEDESAD*FPLCSGKRAWE
Trigger: CTCCCATGCTCTCTTCCCAGAGCACAGTGGGAAGCAGTCAGCCGACTCATCCTCTAGCAGGTCCTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp ATCACGTGCTGTTGCTCTGGCTCAGGATGGCTCAGATaGCTCCCCCGGACAGATGCTGAGAACGTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: ITCCCSGSGWLR*LPRTDAENVGA
Trigger: GGCTCCCACGTTCTCAGCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp CACTTCTTTGGGCTCCCCTGCTCCGGCTGCAACCTCTaGATCACGTGCTGTTGCTCTGGCTCAGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: HFFGLPCSGCNL*ITCCCSGSGWL
Trigger: GAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp TCAGCACCACCCTCTGGGCGCTCATCATTGCTGACTTaGTCTGCAACAGGCAGAGGAGGCTCAGGCACCTCA +
Preference number: 6 (lower is better)
Translates to: SAPPSGRSSLLT*SATGRGGSGTS
Trigger: TGAGGTGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp CCCGGACAGATGCTGAGAACGTGGGAGCCTTCTCCTTaGGTTCAAGGACCTGCAGCTGTGGCCCAGATGGAG +
Preference number: 6 (lower is better)
Translates to: PGQMLRTWEPSP*VQGPAAVAQME
Trigger: CTCCATCTGGGCCACAGCTGCAGGTCCTTGAACCAAAGGAGAAGGCTCCCACGTTCTCAGCATCTGTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp CAGCTGGTGGCTCTGCCTCTTCAGCTTCACACTTCTTaGGGCTCCCCTGCTCCGGCTGCAACCTCTGGATCA +
Preference number: 6 (lower is better)
Translates to: QLVALPLQLHTS*GSPAPAATSGS
Trigger: TGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTGAAGAGGCAGAGCCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 90 bp ACGCGGAACGGGAACGAGATCGGGAACGTGACCTGGACTCTGAAGTaGACCTGGAGCCCATCTTGGGTCTCTCGTGAGGGTTGGCATGAA +
Preference number: 6 (lower is better)
Translates to: TRNGNEIGNVTWTLK*TWSPSWVSREGWHE
Trigger: TTCATGCCAACCCTCACGAGAGACCCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGTCACGTTCCCGATCTCGTTCCCGTTCCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS TCA 72 bp CTTCTTCAGCACCACCCTCTGGGCGCTCATCATTGCTaGCTTGGTCTGCAACAGGCAGAGGAGGCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LLQHHPLGAHHC*LGLQQAEEAQA
Trigger: TGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 72 bp TCTGTCTCATCCTCAGAGATTCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCCTGCCCCGCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: SVSSSEIRESSA*RSTTASCPARG
Trigger: ACCCCTGGCGGGGCAGGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCGAATCTCTGAGGATGAGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 72 bp CTCAGGATGGCTCAGATGCCTCCCCCGGACAGATGCTaGGAACGTGGGAGCCTTCTCCTTTGGTTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: LRMAQMPPPDRC*ERGSLLLWFKD
Trigger: GTCCTTGAACCAAAGGAGAAGGCTCCCACGTTCTCAGCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp AACGCCCTTCGAACGGACCGGATTGGCCCCGCCCACTaGCATAGTCTACCCCTCTATTACCGCTCAGAATTC +
Preference number: 6 (lower is better)
Translates to: NALRTDRIGPAH*HSLPLYYRSEF
Trigger: GAATTCTGAGCGGTAATAGAGGGGTAGACTATGGCAGTGGGCGGGGCCAATCCGGTCCGTTCGAAGGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
CDS GCA 72 bp CTCTGGAGACTCCAGGGCTCAGAGATTTTCTGCTGCTaGTTGACGCGGAACGGGAACGAGATCGGGAACGTG +
Preference number: 6 (lower is better)
Translates to: LWRLQGSEIFCC*LTRNGNEIGNV
Trigger: CACGTTCCCGATCTCGTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCCCTGGAGTCTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp TCAGCTTCACACTTCTTTGGGCTCCCCTGCTCCGGCTaGAACCTCTGGATCACGTGCTGTTGCTCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SASHFFGLPCSG*NLWITCCCSGS
Trigger: TGAGCCAGAGCAACAGCACGTGATCCAGAGGTTGCAGCCGGAGCAGGGGAGCCCAAAGAAGTGTGAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp AACTCGTGCTTGGGCTCCATCTCTCTGCTTAGATCCTaGAGACGACTGTGGGCGGGAAGCCACACTGTCAGG +
Preference number: 6 (lower is better)
Translates to: NSCLGSISLLRS*RRLWAGSHTVR
Trigger: CCTGACAGTGTGGCTTCCCGCCCACAGTCGTCTCCAGGATCTAAGCAGAGAGATGGAGCCCAAGCACGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp TTGACGCGGAACGGGAACGAGATCGGGAACGTGACCTaGACTCTGAAGTTGACCTGGAGCCCATCTTGGGTC +
Preference number: 6 (lower is better)
Translates to: LTRNGNEIGNVT*TLKLTWSPSWV
Trigger: GACCCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGTCACGTTCCCGATCTCGTTCCCGTTCCGCGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp AACCTCTGGATCACGTGCTGTTGCTCTGGCTCAGGATaGCTCAGATGCCTCCCCCGGACAGATGCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: NLWITCCCSGSG*LRCLPRTDAEN
Trigger: GTTCTCAGCATCTGTCCGGGGGAGGCATCTGAGCCATCCTGAGCCAGAGCAACAGCACGTGATCCAGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp GGGAACGAGATCGGGAACGTGACCTGGACTCTGAAGTaGACCTGGAGCCCATCTTGGGTCTCTCGTGAGGGT +
Preference number: 6 (lower is better)
Translates to: GNEIGNVTWTLK*TWSPSWVSREG
Trigger: ACCCTCACGAGAGACCCAAGATGGGCTCCAGGTCAACTTCAGAGTCCAGGTCACGTTCCCGATCTCGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp TGGAGACTCCAGGGCTCAGAGATTTTCTGCTGCTGCTaGACGCGGAACGGGAACGAGATCGGGAACGTGACC +
Preference number: 6 (lower is better)
Translates to: WRLQGSEIFCCC*TRNGNEIGNVT
Trigger: GGTCACGTTCCCGATCTCGTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCCCTGGAGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp ACCACCCTCTGGGCGCTCATCATTGCTGACTTGGTCTaGAACAGGCAGAGGAGGCTCAGGCACCTCATTTTC +
Preference number: 6 (lower is better)
Translates to: TTLWALIIADLV*NRQRRLRHLIF
Trigger: GAAAATGAGGTGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp TGGTTCAAGGACCTGCAGCTGTGGCCCAGATGGAGCTaGAGCCTCCTGACCACAAGAGGGATCTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: WFKDLQLWPRWS*SLLTTRGIFGF
Trigger: GAAACCAAAGATCCCTCTTGTGGTCAGGAGGCTGCAGCTCCATCTGGGCCACAGCTGCAGGTCCTTGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp ATGTTACTGATCTTGCCCCTGGGTGGGGAGGGCACCTaGGCGGTCCGGACTGGGTCATCAATTGTAATGGAA +
Preference number: 6 (lower is better)
Translates to: MLLILPLGGEGT*AVRTGSSIVME
Trigger: TTCCATTACAATTGATGACCCAGTCCGGACCGCCCAGGTGCCCTCCCCACCCAGGGGCAAGATCAGTAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 72 bp TTGACCTGGAGCCCATCTTGGGTCTCTCGTGAGGGTTaGCATGAACTCGTGCTTGGGCTCCATCTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LTWSPSWVSREG*HELVLGLHLSA
Trigger: AGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCCAACCCTCACGAGAGACCCAAGATGGGCTCCAGGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 90 bp TTCCTCTTCTTCAGCACCACCCTCTGGGCGCTCATCATTGCTGACTaGGTCTGCAACAGGCAGAGGAGGCTCAGGCACCTCATTTTCAGG +
Preference number: 6 (lower is better)
Translates to: FLFFSTTLWALIIAD*VCNRQRRLRHLIFR
Trigger: CCTGAAAATGAGGTGCCTGAGCCTCCTCTGCCTGTTGCAGACCAAGTCAGCAATGATGAGCGCCCAGAGGGTGGTGCTGAAGAAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp TTCTCGTTCTTTTCGCCGCTTCTCCCGCTCCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAACAATTTGGCTCTCAGTCAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: FSFFSPLLPLLGPFS*LCLLLNNLALSQRE
Trigger: CTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCGGCGAAAAGAACGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp TATCTCTGGAGACTCCAGGGCTCAGAGATTTTCTGCTaGTGCTTGACGCGGAACGGGAACGAGATCGGGAAC +
Preference number: 6 (lower is better)
Translates to: YLWRLQGSEIFC*CLTRNGNEIGN
Trigger: GTTCCCGATCTCGTTCCCGTTCCGCGTCAAGCAGCAGCAGAAAATCTCTGAGCCCTGGAGTCTCCAGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp CTTCTTCTCGTTCTTTTCGCCGCTTCTCCCGCTCCTTaGCCCGTTCAGCTTGCTCTGCCTCCTTCTGAACAA +
Preference number: 6 (lower is better)
Translates to: LLLVLFAASPAP*PVQLALPPSEQ
Trigger: TTGTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCGGCGAAAAGAACGAGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp GGCCCGTTCAGCTTGCTCTGCCTCCTTCTGAACAATTaGGCTCTCAGTCAGAGGGAGCCAATAGATGCAGGG +
Preference number: 6 (lower is better)
Translates to: GPFSLLCLLLNN*ALSQREPIDAG
Trigger: CCCTGCATCTATTGGCTCCCTCTGACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp TTTTCGCCGCTTCTCCCGCTCCTTGGCCCGTTCAGCTaGCTCTGCCTCCTTCTGAACAATTTGGCTCTCAGT +
Preference number: 6 (lower is better)
Translates to: FSPLLPLLGPFS*LCLLLNNLALS
Trigger: ACTGAGAGCCAAATTGTTCAGAAGGAGGCAGAGCAAGCTGAACGGGCCAAGGAGCGGGAGAAGCGGCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp CTTGGGTCTCTCGTGAGGGTTGGCATGAACTCGTGCTaGGGCTCCATCTCTCTGCTTAGATCCTGGAGACGA +
Preference number: 6 (lower is better)
Translates to: LGSLVRVGMNSC*GSISLLRSWRR
Trigger: TCGTCTCCAGGATCTAAGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCCAACCCTCACGAGAGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp GCTCTCAGTCAGAGGGAGCCAATAGATGCAGGGAGCTaGCTTAGTCTTACGGAAGAGGTCATCCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: ALSQREPIDAGS*LSLTEEVIQQL
Trigger: AAGCTGCTGGATGACCTCTTCCGTAAGACTAAGGCAGCTCCCTGCATCTATTGGCTCCCTCTGACTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000138321.2
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp CATCTTGGGTCTCTCGTGAGGGTTGGCATGAACTCGTaGTTGGGCTCCATCTCTCTGCTTAGATCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: HLGSLVRVGMNS*LGSISLLRSWR
Trigger: TCTCCAGGATCTAAGCAGAGAGATGGAGCCCAAGCACGAGTTCATGCCAACCCTCACGAGAGACCCAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 90 bp AGATGGCCGATCTACCAAGAGTCCCCGGTGATAGTCCAGCTCATCTaGCTCAGCATAGTCAGCACAAAGGAATTTGGGGTTGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: RWPIYQESPVIVQLI*LSIVSTKEFGVGLG
Trigger: CCCCAGTCCAACCCCAAATTCCTTTGTGCTGACTATGCTGAGCAAGATGAGCTGGACTATCACCGGGGACTCTTGGTAGATCGGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp GGCAGGACACTCTCATCTGACACTCTCCCTGCTGGAGACTCTGCTTaGGTGTCTGTAGTACCTGACAAAGGAGACAGGCTTCTTAGCAGC +
Preference number: 6 (lower is better)
Translates to: GRTLSSDTLPAGDSA*VSVVPDKGDRLLSS
Trigger: GCTGCTAAGAAGCCTGTCTCCTTTGTCAGGTACTACAGACACCAAAGCAGAGTCTCCAGCAGGGAGAGTGTCAGATGAGAGTGTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS TCA 72 bp CAGAAAAAGAGGAGCTCTTTCGGGGTGAATGTGTGCTaGGCTCCAGCTCTGGTCTGTTCAGGCTGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: QKKRSSFGVNVC*APALVCSGCSE
Trigger: TTCAGAGCAGCCTGAACAGACCAGAGCTGGAGCTCAGCACACATTCACCCCGAAAGAGCTCCTCTTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000022793.15
ENSMUST00000147714.8
CDS TCA 72 bp ACTTTCAACACCCTTCTGGGTGGAGCATTCAGGCAGTaGGCTTTTCTGAGCCAGAGGCAGGACACTCTCATC +
Preference number: 6 (lower is better)
Translates to: TFNTLLGGAFRQ*AFLSQRQDTLI
Trigger: GATGAGAGTGTCCTGCCTCTGGCTCAGAAAAGCTCACTGCCTGAATGCTCCACCCAGAAGGGTGTTGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp CGAGCTTCCCGTTCCAGGCGCTGCCTAAGTAGCTCCTaGTGCTTTTCCAGATACTGCTTTATGAAGCTGTTC +
Preference number: 6 (lower is better)
Translates to: RASRSRRCLSSS*CFSRYCFMKLF
Trigger: GAACAGCTTCATAAAGCAGTATCTGGAAAAGCAGCAGGAGCTACTTAGGCAGCGCCTGGAACGGGAAGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CAA 72 bp TGTAAATTTTCTAGCATTAGAGCCCCTTTGAGCCGCTaGACCAGGGCACTCTTCTGCCCGCTCTTGGCTAGG +
Preference number: 6 (lower is better)
Translates to: CKFSSIRAPLSR*TRALFCPLLAR
Trigger: CCTAGCCAAGAGCGGGCAGAAGAGTGCCCTGGTCAAGCGGCTCAAAGGGGCTCTAATGCTAGAAAATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 90 bp TTCTGTTCCAAAGACTGTTTCTTCATAGGTTCCTCAGTGATGCCTTaGGCAGGTGCGAACTCCTCCACTGTTAGAGGGAGGGGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: FCSKDCFFIGSSVMP*AGANSSTVRGRGAD
Trigger: GTCTGCTCCCCTCCCTCTAACAGTGGAGGAGTTCGCACCTGCCAAAGGCATCACTGAGGAACCTATGAAGAAACAGTCTTTGGAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS TCA 72 bp TCTGTCTCATCCTCAGAGATTCGGGAGTCATCGGCATaGAGATCCACAACAGCCTCCTTGAGTGACTCAGTG +
Preference number: 6 (lower is better)
Translates to: SVSSSEIRESSA*RSTTASLSDSV
Trigger: CACTGAGTCACTCAAGGAGGCTGTTGTGGATCTTCATGCCGATGACTCCCGAATCTCTGAGGATGAGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000123875.2
ENSMUST00000141453.8
ENSMUST00000147714.8
CDS CCA 72 bp CTCTTCCCCTTCTTCATCCTCAAACTGCTTCAGGGTTaGTGCCTCAGCCTCTCTAGATTTCTGTGCCTCATC +
Preference number: 6 (lower is better)
Translates to: LFPFFILKLLQG*CLSLSRFLCLI
Trigger: GATGAGGCACAGAAATCTAGAGAGGCTGAGGCACCAACCCTGAAGCAGTTTGAGGATGAAGAAGGGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CCA 72 bp CAGACTTTTCACGCTCACTTTCAACACCCTTCTGGGTaGAGCATTCAGGCAGTGAGCTTTTCTGAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: QTFHAHFQHPSG*SIQAVSFSEPE
Trigger: CTCTGGCTCAGAAAAGCTCACTGCCTGAATGCTCCACCCAGAAGGGTGTTGAAAGTGAGCGTGAAAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp CTCTCATCTGACACTCTCCCTGCTGGAGACTCTGCTTaGGTGTCTGTAGTACCTGACAAAGGAGACAGGCTT +
Preference number: 6 (lower is better)
Translates to: LSSDTLPAGDSA*VSVVPDKGDRL
Trigger: AAGCCTGTCTCCTTTGTCAGGTACTACAGACACCAAAGCAGAGTCTCCAGCAGGGAGAGTGTCAGATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS GCA 72 bp TTCCCCTTCTTCATCCTCAAACTGCTTCAGGGTTGGTaGCTCAGCCTCTCTAGATTTCTGTGCCTCATCTAC +
Preference number: 6 (lower is better)
Translates to: FPFFILKLLQGW*LSLSRFLCLIY
Trigger: GTAGATGAGGCACAGAAATCTAGAGAGGCTGAGGCACCAACCCTGAAGCAGTTTGAGGATGAAGAAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CCA 72 bp ACCAAAGTTCCTGTACGCCCCAATAATTCCTTCAGCTaGCCTAAAGTGAAGGGACGAACCAGGTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: TKVPVRPNNSFS*PKVKGRTRLEM
Trigger: CATCTCCAACCTGGTTCGTCCCTTCACTTTAGGCCAGCTGAAGGAATTATTGGGGCGTACAGGAACTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp GTTAAGGTATCTCCTAATGTTACTTTCTTTACTTCGTaGTCCACAGGTGGGGGCAAGGCAACCTCCACTGAC +
Preference number: 6 (lower is better)
Translates to: VKVSPNVTFFTS*STGGGKATSTD
Trigger: GTCAGTGGAGGTTGCCTTGCCCCCACCTGTGGAGCACGAAGTAAAGAAAGTAACATTAGGAGATACCTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS GCA 72 bp CACAAGAGGGATCTTTGGTTTCAGTGTAGCTGGTGTTaGTATCTCTGGAGACTCCAGGGCTCAGAGATTTTC +
Preference number: 6 (lower is better)
Translates to: HKRDLWFQCSWC*YLWRLQGSEIF
Trigger: GAAAATCTCTGAGCCCTGGAGTCTCCAGAGATAGCAACACCAGCTACACTGAAACCAAAGATCCCTCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CAA 72 bp ATCTACCAAGAGTCCCCGGTGATAGTCCAGCTCATCTaGCTCAGCATAGTCAGCACAAAGGAATTTGGGGTT +
Preference number: 6 (lower is better)
Translates to: IYQESPVIVQLI*LSIVSTKEFGV
Trigger: AACCCCAAATTCCTTTGTGCTGACTATGCTGAGCAAGATGAGCTGGACTATCACCGGGGACTCTTGGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS TCA 72 bp CCTTCCACTGGCTCCATCTCTTCCTGGAGTTGTATATaGGTTGGTGGAGATGACGCTTCCTTGGTAAGTAAA +
Preference number: 6 (lower is better)
Translates to: PSTGSISSWSCI*VGGDDASLVSK
Trigger: TTTACTTACCAAGGAAGCGTCATCTCCACCAACTCATATACAACTCCAGGAAGAGATGGAGCCAGTGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000147714.8
CDS CCA 72 bp TGCTGCTTTTCCAGATACTGCTTTATGAAGCTGTTCTaGCTCATTTCCTCCCCGATCTGTGAATTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: CCFSRYCFMKLF*LISSPICEFGW
Trigger: CCAGCCAAATTCACAGATCGGGGAGGAAATGAGCCAGAACAGCTTCATAAAGCAGTATCTGGAAAAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS TCA 72 bp ACGGCTTCCTCTACTGTAGAGTACGTCACAAAGCAATaGGATTTGATCTTGTCTATCCAGAAGGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: TASSTVEYVTKQ*DLILSIQKASS
Trigger: GGAAGAGGCCTTCTGGATAGACAAGATCAAATCTCATTGCTTTGTGACGTACTCTACAGTAGAGGAAGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CCA 72 bp GGGTCATCAATTGTAATGGAAACTCCAGACTTCTGTTaGCTGATGGACCTCCGGGTTAAGGTATCTCCTAAT +
Preference number: 6 (lower is better)
Translates to: GSSIVMETPDFC*LMDLRVKVSPN
Trigger: ATTAGGAGATACCTTAACCCGGAGGTCCATCAGCCAACAGAAGTCTGGAGTTTCCATTACAATTGATGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000022793.15
ENSMUST00000022794.14
ENSMUST00000111484.9
ENSMUST00000126166.8
ENSMUST00000141453.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 72 bp GTAGCTGAGACAACGGAGATTTTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTCTTTTCCTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: VAETTEIFLLND*GIELSFFSSSS
Trigger: TGAAGAAGAGGAAAAGAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCGTTGTCTCAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000123875.2
ENSMUST00000126166.8
ENSMUST00000147714.8
ENSMUST00000148754.10
ENSMUST00000150371.8
ENSMUST00000167015.8
CDS CAA 90 bp CTCATTTTCTTCTTGAGGGAGAGAAACAATTTGTGTCTCTTTCTCTaGTTGCTGTCTGGCCAGATGACTTCTTCTAGCTTCTTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: LIFFLRERNNLCLFL*LLSGQMTSSSFFLG
Trigger: TCCCAAGAAGAAGCTAGAAGAAGTCATCTGGCCAGACAGCAACAAGAGAAAGAGACACAAATTGTTTCTCTCCCTCAAGAAGAAAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022793.15
ENSMUST00000111484.9
ENSMUST00000125265.2
ENSMUST00000147714.8
CDS CAA 72 bp TTGGTAGAGACAACGGAGATTTTCCTCTTGAATGACTaGGGCATCGAACTCTCTTTCTTTTCCTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LVETTEIFLLND*GIELSFFSSSS
Trigger: TGAAGAAGAGGAAAAGAAAGAGAGTTCGATGCCCAAGTCATTCAAGAGGAAAATCTCCGTTGTCTCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000022794.14
ENSMUST00000141453.8