Pregenerated sensors for ACHE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023328Ensembl transcript IDs: ENSMUST00000024099.11, ENSMUST00000085934.4, ENSMUST00000196208.5
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGGAGTGGACAGGGCCTaGGGGCTCGGTCGTATTATA | + |
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Preference number: 2 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRGVDRA*GLGRII Trigger: TATAATACGACCGAGCCCCCAGGCCCTGTCCACTCC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCGGCGGGCCAGCAGTGTaGCCCTGCGCCTGGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPGGPAV*PCAWPL Trigger: GAGAGGCCAGGCGCAGGGCCACACTGCTGGCCCGCC...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGGCGGGCCAGCAGTGTaGCCCTGCGCCTGGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISGGPAV*PCAWPL Trigger: GAGAGGCCAGGCGCAGGGCCACACTGCTGGCCCGCC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGGGCGGGCCAGCAGTGTaGCCCTGCGCCTGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQGGPAV*PCAWPL Trigger: GAGAGGCCAGGCGCAGGGCCACACTGCTGGCCCGCC...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCCAGAAGGCGCAGGTCTaGGCGCGCAGTCCCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPQKAQV*ARSPRR Trigger: GCGGCGGGGACTGCGCGCCCAGACCTGCGCCTTCTG...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCAGAAGGCGCAGGTCTaGGCGCGCAGTCCCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQQKAQV*ARSPRR Trigger: GCGGCGGGGACTGCGCGCCCAGACCTGCGCCTTCTG...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGCCACCAGCGCCACCTaGGGGACAGCCCACAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISATSAT*GTAHKA Trigger: CGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCACAGAAGGCGCAGGTCTaGGCGCGCAGTCCCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPQKAQV*ARSPRR Trigger: GCGGCGGGGACTGCGCGCCCAGACCTGCGCCTTCTG...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCACCAGCGCCACCTaGGGGACAGCCCACAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPATSAT*GTAHKA Trigger: CGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTGGCTGTAACAGTTTATTGGCGGCCCAGAGGGGCGAAGGCACCGCGGGGAGTCGCCCAGCCAGCTaGGCCACAGGGCACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: SGGCNSLLAAQRGEGTAGSRPAS*ATGHTT Trigger: CGTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCGACT...CCCCGCGGTGCCTTCGCCCCTCTGGGCCGCCAATAAACTGTTACAGCCACCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024099.11 |
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| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGACCCTCACCAGCAGCTaGGGGTCTTCCCGGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQTLTSS*GSSRPS Trigger: TGAGGGCCGGGAAGACCCGCAGCTGCTGGTGAGGGT...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGGTGTGGCCCTGCGCCTaGCCTCTCCAGCACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQVWPCA*PLQHSQ Trigger: CTGTGAGTGCTGGAGAGGCCAGGCGCAGGGCCACAC...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGCCACCAGCGCCACCTaGGGGACAGCCCACAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRATSAT*GTAHKA Trigger: CGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCAGTCGCCCAGCCAGCTaGGCCACAGGGCACACAACG | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPSRPAS*ATGHTT Trigger: CGTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCGACT...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS-3UTR TCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGGATGCCCAGAAAAGCTaGGACTGGGCCTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQDAQKS*DWASRG Trigger: GCCCCTGGAGGCCCAGTCTCAGCTTTTCTGGGCATC...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR TCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGATGCCCAGAAAAGCTaGGACTGGGCCTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISDAQKS*DWASRG Trigger: GCCCCTGGAGGCCCAGTCTCAGCTTTTCTGGGCATC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR TCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCTGGTCCACCAGGTCCTaGGCGGGCCTTGTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPWSTRS*AGLVLK Trigger: CTTGAGGACAAGGCCCGCTCAGGACCTGGTGGACCA...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCCATGCCCACGGAGGCTaGACCCGCACTCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPHAHGG*TRTLPK Trigger: TTTGGGGAGAGTGCGGGTGCAGCCTCCGTGGGCATG...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCATGCCCACGGAGGCTaGACCCGCACTCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQHAHGG*TRTLPK Trigger: TTTGGGGAGAGTGCGGGTGCAGCCTCCGTGGGCATG...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGGGACAGTATGTGCATaGCCACGGAGGCTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISGTVCA*PRRLHP Trigger: CGGGTGCAGCCTCCGTGGGCATGCACATACTGTCCC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCCAGCAGTGTGGCCCTaGGCCTGGCCTCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRPAVWP*AWPLQH Trigger: GTGCTGGAGAGGCCAGGCGCAGGGCCACACTGCTGG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAACCAGCAGTGTGGCCCTaGGCCTGGCCTCTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKPAVWP*AWPLQH Trigger: GTGCTGGAGAGGCCAGGCGCAGGGCCACACTGCTGG...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTCAGCTCGGTGTCATTaGCACCAGCGCCACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQSARCH*HQRHLG Trigger: CCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGA...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCTCAGCTCGGTGTCATTaGCACCAGCGCCACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISSARCH*HQRHLG Trigger: CCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGA...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCTGGAGGACAGCCCTGTaGAAGAGGCTCCTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPWRTAL*KRLLLG Trigger: GCCCAGCAGGAGCCTCTTCCACAGGGCTGTCCTCCA...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTGGAGGACAGCCCTGTaGAAGAGGCTCCTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQWRTAL*KRLLLG Trigger: GCCCAGCAGGAGCCTCTTCCACAGGGCTGTCCTCCA...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQNSAFH*RSASSR Trigger: TCTGGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISNSAFH*RSASSR Trigger: TCTGGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR TCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCATGGTCCACCAGGTCCTaGGCGGGCCTTGTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPWSTRS*AGLVLK Trigger: CTTGAGGACAAGGCCCGCTCAGGACCTGGTGGACCA...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGACCCTCACCAGCAGCTaGGGGTCTTCCCGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRTLTSS*GSSRPS Trigger: TGAGGGCCGGGAAGACCCGCAGCTGCTGGTGAGGGT...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAACCCTCACCAGCAGCTaGGGGTCTTCCCGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKTLTSS*GSSRPS Trigger: TGAGGGCCGGGAAGACCCGCAGCTGCTGGTGAGGGT...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | TCTGGTGGCTGTAACAGTTTATTGGCGGCCCAGAGGGGCGAAGGCACCGCGGGGTGCCAGGGGCTTCTCTaGTTCCTGGTAGGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SGGCNSLLAAQRGEGTAGCQGLL*FLVGPR Trigger: TCTTGGCCCTACCAGGAAGCAGAGAAGCCCCTGGCA...CCCCGCGGTGCCTTCGCCCCTCTGGGCCGCCAATAAACTGTTACAGCCACCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024099.11 |
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| CDS-3UTR GCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCGGCAGGGACAGTATGTaGATGCCCACGGAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPGRDSM*MPTEAA Trigger: TGCAGCCTCCGTGGGCATGCACATACTGTCCCTGCC...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGTGTGGCCCTGCGCCTaGCCTCTCCAGCACTCACAG | + |
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Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKVWPCA*PLQHSQ Trigger: CTGTGAGTGCTGGAGAGGCCAGGCGCAGGGCCACAC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGTGTGGCCCTGCGCCTaGCCTCTCCAGCACTCACAG | + |
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Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRVWPCA*PLQHSQ Trigger: CTGTGAGTGCTGGAGAGGCCAGGCGCAGGGCCACAC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCACCCCAGCCAGGAACTaGGCCCGGCTGATGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISTPARN*ARLMRD Trigger: ATCTCTCATCAGCCGGGCCCAGTTCCTGGCTGGGGT...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCGCCAGGTCACTTGCTTaGGGTACACCGATCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPARSLA*GTPIRT Trigger: GGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGC...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS-3UTR TCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGTGGTCCACCAGGTCCTaGGCGGGCCTTGTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRWSTRS*AGLVLK Trigger: CTTGAGGACAAGGCCCGCTCAGGACCTGGTGGACCA...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR TCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCACCTCCGGTGTGTCACTaGGGAAGTCCCCGTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPPPVCH*GSPRLP Trigger: TGGTAGACGGGGACTTCCTCAGTGACACACCGGAGG...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR TCA 90 bp | TCTGGTGGCTGTAACAGTTTATTGGCGGCCCAGAGGGGCGAAGGCACCGCGGGGGAGTATCGGTGGCGCTaGGCAATTTGGGGAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGCNSLLAAQRGEGTAGEYRWR*AIWGES Trigger: GCTTTCTCCCCAAATTGCTCAGCGCCACCGATACTC...CCCCGCGGTGCCTTCGCCCCTCTGGGCCGCCAATAAACTGTTACAGCCACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024099.11 |
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| CDS-3UTR GCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCAGGGAAGGTGTATaGAGGGGATACCAGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPAREGV*RGYQGG Trigger: GCCTCCCTGGTATCCCCTGCATACACCTTCCCTGGC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTGCCAGGGGCTTCTCTaGTTCCTGGTAGGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQCQGLL*FLVGPR Trigger: TCTTGGCCCTACCAGGAAGCAGAGAAGCCCCTGGCA...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAACATGCCCACGGAGGCTaGACCCGCACTCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKHAHGG*TRTLPK Trigger: TTTGGGGAGAGTGCGGGTGCAGCCTCCGTGGGCATG...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGGGACAGTATGTGCATaGCCACGGAGGCTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKGTVCA*PRRLHP Trigger: CGGGTGCAGCCTCCGTGGGCATGCACATACTGTCCC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAATCAGCTCGGTGTCATTaGCACCAGCGCCACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKSARCH*HQRHLG Trigger: CCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGA...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCTTGGGTGTGCCACTCTaGAGGACAGCCCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPLGVPL*RTALWK Trigger: CTTCCACAGGGCTGTCCTCCAGAGTGGCACACCCAA...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTTGGGTGTGCCACTCTaGAGGACAGCCCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQLGVPL*RTALWK Trigger: CTTCCACAGGGCTGTCCTCCAGAGTGGCACACCCAA...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKNSAFH*RSASSR Trigger: TCTGGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAACCTCCGGTGTGTCACTaGGGAAGTCCCCGTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKPPVCH*GSPRLP Trigger: TGGTAGACGGGGACTTCCTCAGTGACACACCGGAGG...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCCTCCGGTGTGTCACTaGGGAAGTCCCCGTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRPPVCH*GSPRLP Trigger: TGGTAGACGGGGACTTCCTCAGTGACACACCGGAGG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGAGTATCGGTGGCGCTaGGCAATTTGGGGAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISEYRWR*AIWGES Trigger: GCTTTCTCCCCAAATTGCTCAGCGCCACCGATACTC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGCCAGGGAAGGTGTATaGAGGGGATACCAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKAREGV*RGYQGG Trigger: GCCTCCCTGGTATCCCCTGCATACACCTTCCCTGGC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCATGCCAGGGGCTTCTCTaGTTCCTGGTAGGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPCQGLL*FLVGPR Trigger: TCTTGGCCCTACCAGGAAGCAGAGAAGCCCCTGGCA...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCCCAGCAGACCTACATTaGCAGGGGCTTCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPPADLH*QGLLCF Trigger: GAAGCAGAGAAGCCCCTGGCAATGTAGGTCTGCTGG...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCAGCAGACCTACATTaGCAGGGGCTTCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQPADLH*QGLLCF Trigger: GAAGCAGAGAAGCCCCTGGCAATGTAGGTCTGCTGG...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGGCAGGGACAGTATGTaGATGCCCACGGAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRGRDSM*MPTEAA Trigger: TGCAGCCTCCGTGGGCATGCACATACTGTCCCTGCC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCTGTGGAAGAGGCTCCTaGTGGGCAGGGACAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPCGRGS*WAGTVC Trigger: ACATACTGTCCCTGCCCAGCAGGAGCCTCTTCCACA...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGGCTGCCAGGTCACTTaGTTGGGGTACACCGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRGCQVT*LGYTDP Trigger: CGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCATTGGGTGTGCCACTCTaGAGGACAGCCCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPLGVPL*RTALWK Trigger: CTTCCACAGGGCTGTCCTCCAGAGTGGCACACCCAA...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGACCCCAGCCAGGAACTaGGCCCGGCTGATGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRTPARN*ARLMRD Trigger: ATCTCTCATCAGCCGGGCCCAGTTCCTGGCTGGGGT...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGCCAGGTCACTTGCTTaGGGTACACCGATCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRARSLA*GTPIRT Trigger: GGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGGGGGCCAAGTCAGTGTaGAGGCACGGTGTTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQGAKSV*RHGVQR Trigger: TCTTTGAACACCGTGCCTCCACACTGACTTGGCCCC...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGGGGCCAAGTCAGTGTaGAGGCACGGTGTTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISGAKSV*RHGVQR Trigger: TCTTTGAACACCGTGCCTCCACACTGACTTGGCCCC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCGCTCTGCAAAGGGGATaGCCAGAAAAGCTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPALQRG*PEKLRL Trigger: CAGTCTCAGCTTTTCTGGGCATCCCCTTTGCAGAGC...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCATGTGGAAGAGGCTCCTaGTGGGCAGGGACAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPCGRGS*WAGTVC Trigger: ACATACTGTCCCTGCCCAGCAGGAGCCTCTTCCACA...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGAGCAGCGCTCCTGCTTaGTATAGTGGTCGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGGVDRAWGLGRIISQSSAPA*YSGRTG Trigger: ACCAGTTCGACCACTATAGCAAGCAGGAGCGCTGCT...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCAGCAGCGCTCCTGCTTaGTATAGTGGTCGAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISSSAPA*YSGRTG Trigger: ACCAGTTCGACCACTATAGCAAGCAGGAGCGCTGCT...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCTGGGAGAAGCAGGTCTaGGGTATGGTGTCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISWEKQV*GMVSTH Trigger: ATGTGTGGACACCATACCCCAGACCTGCTTCTCCCA...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGGAAGAGGCTCCTGCTaGGCAGGGACAGTATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKGRGSC*AGTVCA Trigger: TGCACATACTGTCCCTGCCCAGCAGGAGCCTCTTCC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGAGTATCGGTGGCGCTaGGCAATTTGGGGAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKEYRWR*AIWGES Trigger: GCTTTCTCCCCAAATTGCTCAGCGCCACCGATACTC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCTCTGCAAAGGGGATaGCCAGAAAAGCTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPALQRG*PEKLRL Trigger: CAGTCTCAGCTTTTCTGGGCATCCCCTTTGCAGAGC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCCAGCAGACCTACATTaGCAGGGGCTTCTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRPADLH*QGLLCF Trigger: GAAGCAGAGAAGCCCCTGGCAATGTAGGTCTGCTGG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGTCGCCCCCAAAGGCTaGAATATTTTCTTGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISVAPKG*NIFLHP Trigger: TGGGTGCAAGAAAATATTGCAGCCTTTGGGGGCGAC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCACTCAACTCTCGGTTaGGGTTCCACATCTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISHSTLG*GSTSQY Trigger: GTACTGAGATGTGGAACCCCAACCGAGAGTTGAGTG...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGGGGCCAAGTCAGTGTaGAGGCACGGTGTTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRGAKSV*RHGVQR Trigger: TCTTTGAACACCGTGCCTCCACACTGACTTGGCCCC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCATTCATTGTCTTTGCTaGAGCCTGGGACCCCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSRGGVDRAWGLGRIISIHCLC*SLGPRK Trigger: TTTACGGGGTCCCAGGCTTCAGCAAAGACAATGAAT...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR TCA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCGCCAGCTGCAGGTCTTaGAAATCTCCAGTATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSVYTARGSGRAAGPGVPASCRS*KSPVLM Trigger: CATCAATACTGGAGATTTTCAAGACCTGCAGCTGGC...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGCTCTGCAAAGGGGATaGCCAGAAAAGCTGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKALQRG*PEKLRL Trigger: CAGTCTCAGCTTTTCTGGGCATCCCCTTTGCAGAGC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTCGCCCCCAAAGGCTaGAATATTTTCTTGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPVAPKG*NIFLHP Trigger: TGGGTGCAAGAAAATATTGCAGCCTTTGGGGGCGAC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCACACTCAACTCTCGGTTaGGGTTCCACATCTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSGRSGQGLGARSYYIPHSTLG*GSTSQY Trigger: GTACTGAGATGTGGAACCCCAACCGAGAGTTGAGTG...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGTGGGAGAAGCAGGTCTaGGGTATGGTGTCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRWEKQV*GMVSTH Trigger: ATGTGTGGACACCATACCCCAGACCTGCTTCTCCCA...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGTCGCCCCCAAAGGCTaGAATATTTTCTTGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKVAPKG*NIFLHP Trigger: TGGGTGCAAGAAAATATTGCAGCCTTTGGGGGCGAC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGTCTTTGCTGAAGCCTaGGACCCCGTAAACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRVFAEA*DPVNQK Trigger: TTTCTGGTTTACGGGGTCCCAGGCTTCAGCAAAGAC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGTCTTTGCTGAAGCCTaGGACCCCGTAAACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKVFAEA*DPVNQK Trigger: TTTCTGGTTTACGGGGTCCCAGGCTTCAGCAAAGAC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR TCA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGATTCATTGTCTTTGCTaGAGCCTGGGACCCCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRIHCLC*SLGPRK Trigger: TTTACGGGGTCCCAGGCTTCAGCAAAGACAATGAAT...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR TCA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAAGCACCTGCAGGTCTTaGAAATCTCCAGTATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRSGQGLGARSYYIPALKSTCRS*KSPVLM Trigger: CATCAATACTGGAGATTTTCAAGACCTGCAGGTGCT...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS CCA 90 bp | CACCAGCGCCACCTGGGGGACAGCCCACAAGGCGGGCCAGCAGTGTaGCCCTGCGCCTGGCCTCTCCAGCACTCACAGTGGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQRHLGDSPQGGPAV*PCAWPLQHSQWPRA Trigger: GGCCCTGGGCCACTGTGAGTGCTGGAGAGGCCAGGCGCAGGGCCACACTGCTGGCCCGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS CCA 90 bp | CCTCAAGCAGGCTATCAGCTCGGTGTCATTGCCACCAGCGCCACCTaGGGGACAGCCCACAAGGCGGGCCAGCAGTGTGGCCCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQAGYQLGVIATSAT*GTAHKAGQQCGPAP Trigger: AGGCGCAGGGCCACACTGCTGGCCCGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGATAGCCTGCTTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS GCA 90 bp | CCTGAGCGGGCCTTGTCCTCAAGCAGGCTATCAGCTCGGTGTCATTaGCACCAGCGCCACCTGGGGGACAGCCCACAAGGCGGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PERALSSSRLSARCH*HQRHLGDSPQGGPA Trigger: TGCTGGCCCGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGATAGCCTGCTTGAGGACAAGGCCCGCTCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCATAGACCCGGGCCCCTaGGGCAGCCAGTCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSVYTARGSGRAAGPGVPIDPGP*GSQSPS Trigger: GCTGGGCGACTGGCTGCCCAAGGGGCCCGGGTCTAT...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCATAGACCCGGGCCCCTaGGGCAGCCAGTCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISIDPGP*GSQSPS Trigger: GCTGGGCGACTGGCTGCCCAAGGGGCCCGGGTCTAT...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAATAGACCCGGGCCCCTaGGGCAGCCAGTCGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKSGRSGQGLGARSYYIPIDPGP*GSQSPS Trigger: GCTGGGCGACTGGCTGCCCAAGGGGCCCGGGTCTAT...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS GCA 90 bp | CCAGTCTGTGTAATGCAGGACCACAGCCTCGGCTGCCAGGTCACTTaGTTGGGGTACACCGATCCGCACCCCAGCCAGGAACTGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVCVMQDHSLGCQVT*LGYTDPHPSQELGP Trigger: CGGGCCCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCATTACACAGACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTGGCCCAGGGCCCATaGGGTGTGCCACTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKSGRSGQGLGARSYYIPVAQGP*GVPLWR Trigger: CCTCCAGAGTGGCACACCCAATGGGCCCTGGGCCAC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS CCA 90 bp | GCGCTGAGCAATTTGGGGAGAAAGCGATTCCAGAAGGCGCAGGTCTaGGCGCGCAGTCCCCGCCGCACCTCTAAGGGCTTCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSNLGRKRFQKAQV*ARSPRRTSKGFRFR Trigger: CCTGAACCTGAAGCCCTTAGAGGTGCGGCGGGGACTGCGCGCCCAGACCTGCGCCTTCTGGAATCGCTTTCTCCCCAAATTGCTCAGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGTGGCCCAGGGCCCATaGGGTGTGCCACTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSGQGLGARSYYIPALKVAQGP*GVPLWR Trigger: CCTCCAGAGTGGCACACCCAATGGGCCCTGGGCCAC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCCCTGACCAGGGCCGCTaGGGCTCTGGTGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NSVYTARGSGRAAGPGVPPDQGR*GSGGIN Trigger: ATTTATGCCACCAGAGCCCAAGCGGCCCTGGTCAGG...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTGCCAGGTCACTTGCTaGGGGTACACCGATCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSRGGVDRAWGLGRIISQCQVTC*GYTDPH Trigger: GTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCA...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCACGGCTGCCAGGTCACTaGCTTGGGGTACACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RKSGRSGQGLGARSYYIPRLPGH*LGVHRS Trigger: GGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCG...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS GCA 90 bp | AGCCAGCTGGGCCACAGGGCACACAACGTTGTGGTCGCCTACCACTaGACTCATGGCATCTCTCAGGTGAGTAGGGTCCTCAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQLGHRAHNVVVAYH*THGISQVSRVLRVQ Trigger: CTGCACCCTGAGGACCCTACTCACCTGAGAGATGCCATGAGTGCAGTGGTAGGCGACCACAACGTTGTGTGCCCTGTGGCCCAGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCATGCCAGGTCACTTGCTaGGGGTACACCGATCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKSGRSGQGLGARSYYIPCQVTC*GYTDPH Trigger: GTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCA...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCGGCTGCCAGGTCACTaGCTTGGGGTACACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRRLPGH*LGVHRS Trigger: GGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | TCTGGTGGCTGTAACAGTTTATTGGCGGCCCAGAGGGGCGAAGGCACCGCGGGGGTTCAGGCTCACATATaGCTGCGCGGCAGTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SGGCNSLLAAQRGEGTAGVQAHI*LRGSGV Trigger: TACACCACTGCCGCGCAGCAATATGTGAGCCTGAAC...CCCCGCGGTGCCTTCGCCCCTCTGGGCCGCCAATAAACTGTTACAGCCACCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024099.11 |
||
| CDS GCA 90 bp | CCCCGCCGCACCTCTAAGGGCTTCAGGTTCAGGCTCACATATTGCTaGGCGGCAGTGGTGTACGGTGGCCACTGTGGAGATTTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRTSKGFRFRLTYC*AAVVYGGHCGDLES Trigger: AGACTCCAAATCTCCACAGTGGCCACCGTACACCACTGCCGCGCAGCAATATGTGAGCCTGAACCTGAAGCCCTTAGAGGTGCGGCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS GCA 90 bp | AGTCCCCGCCGCACCTCTAAGGGCTTCAGGTTCAGGCTCACATATTaGTGCGCGGCAGTGGTGTACGGTGGCCACTGTGGAGATTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRTSKGFRFRLTY*CAAVVYGGHCGDLE Trigger: CTCCAAATCTCCACAGTGGCCACCGTACACCACTGCCGCGCAGCAATATGTGAGCCTGAACCTGAAGCCCTTAGAGGTGCGGCGGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCCTGACCAGGGCCGCTaGGGCTCTGGTGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRPDQGR*GSGGIN Trigger: ATTTATGCCACCAGAGCCCAAGCGGCCCTGGTCAGG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAACCTGACCAGGGCCGCTaGGGCTCTGGTGGCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRSGQGLGARSYYIPALKPDQGR*GSGGIN Trigger: ATTTATGCCACCAGAGCCCAAGCGGCCCTGGTCAGG...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGTTCAGGCTCACATATaGCTGCGCGGCAGTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISVQAHI*LRGSGV Trigger: TACACCACTGCCGCGCAGCAATATGTGAGCCTGAAC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS TCA 90 bp | CCAAGGAGGCCGCTCCGCTGTAGAAACCACCCCCATAGATCCAGATaGGGACAGGTGTGGGAGAAGCAGGTCTGGGGTATGGTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRRPLRCRNHPHRSR*GQVWEKQVWGMVST Trigger: TGTGGACACCATACCCCAGACCTGCTTCTCCCACACCTGTCCTCATCTGGATCTATGGGGGTGGTTTCTACAGCGGAGCGGCCTCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS CCA 90 bp | AGGTCACTTGCTTGGGGTACACCGATCCGCACCCCAGCCAGGAACTaGGCCCGGCTGATGAGAGATTCATTGTCTTTGCTGAAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLAWGTPIRTPARN*ARLMRDSLSLLKPG Trigger: CCCAGGCTTCAGCAAAGACAATGAATCTCTCATCAGCCGGGCCCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGTTCAGGCTCACATATaGCTGCGCGGCAGTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKSGRSGQGLGARSYYIPVQAHI*LRGSGV Trigger: TACACCACTGCCGCGCAGCAATATGTGAGCCTGAAC...TGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCTCACTCAACTCTCGGTaGGGGTTCCACATCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISSLNSR*GFHISV Trigger: TACTGAGATGTGGAACCCCAACCGAGAGTTGAGTGA...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGTGGCGCTGAGCAATTaGGGGAGAAAGCGATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRVALSN*GRKRFQ Trigger: CTGGAATCGCTTTCTCCCCAAATTGCTCAGCGCCAC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAAGTGGCGCTGAGCAATTaGGGGAGAAAGCGATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSGQGLGARSYYIPALKVALSN*GRKRFQ Trigger: CTGGAATCGCTTTCTCCCCAAATTGCTCAGCGCCAC...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS GCA 90 bp | CTTGCACCCATTGCAAGGCAAGCCGTTGATCCAGCAGACCTACATTaGCAGGGGCTTCTCTGCTTCCTGGTAGGGCCAAGAAGCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPIARQAVDPADLH*QGLLCFLVGPRSQR Trigger: CCTTTGGCTTCTTGGCCCTACCAGGAAGCAGAGAAGCCCCTGGCAATGTAGGTCTGCTGGATCAACGGCTTGCCTTGCAATGGGTGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCTGGTAGCAGACATTTaGGAAGGTGGTAGCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISLVADI*EGGSIQ Trigger: TTGGATGCTACCACCTTCCAAAATGTCTGCTACCAG...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGGGCTGCAATATTTTCTaGCACCCATTGCAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSRGGVDRAWGLGRIISQGCNIF*HPLQGK Trigger: CTTGCCTTGCAATGGGTGCAAGAAAATATTGCAGCC...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCGGCTGCAATATTTTCTaGCACCCATTGCAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISGCNIF*HPLQGK Trigger: CTTGCCTTGCAATGGGTGCAAGAAAATATTGCAGCC...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS CCA 90 bp | GAACTGGGCCCGGCTGATGAGAGATTCATTGTCTTTGCTGAAGCCTaGGACCCCGTAAACCAGAAAGTAGGAGCCCTCGTCCTTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELGPADERFIVFAEA*DPVNQKVGALVLHH Trigger: GTGGTGAAGGACGAGGGCTCCTACTTTCTGGTTTACGGGGTCCCAGGCTTCAGCAAAGACAATGAATCTCTCATCAGCCGGGCCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCCCTTAAATCACTCAACTCTCGGTaGGGGTTCCACATCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRSGQGLGARSYYIPALKSLNSR*GFHISV Trigger: TACTGAGATGTGGAACCCCAACCGAGAGTTGAGTGA...TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGTCACTCAACTCTCGGTaGGGGTTCCACATCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRSLNSR*GFHISV Trigger: TACTGAGATGTGGAACCCCAACCGAGAGTTGAGTGA...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCAGCACCTGCAGGTCTaGAAAATCTCCAGTATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRGGVDRAWGLGRIISQQHLQV*KISSID Trigger: ATCAATACTGGAGATTTTCAAGACCTGCAGGTGCTG...CTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAGTCGGGGAGGAGTGGACAGGGCCTGGGGGCTCGGTCGTATTATATCCCAGCACCTGCAGGTCTaGAAAATCTCCAGTATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGSRGGVDRAWGLGRIISQHLQV*KISSID Trigger: ATCAATACTGGAGATTTTCAAGACCTGCAGGTGCTG...GGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCCTCCCCGACTTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
||
| CDS-3UTR CAA 90 bp | AATAGTGTATATACAGCTAGGGGCTCGGGCAGGGCGGCAGGACCTGGGGTCCCCAGCCAGCTGCAGGTCTaGAAAATCTCCAGTATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSVYTARGSGRAAGPGVPSQLQV*KISSID Trigger: ATCAATACTGGAGATTTTCAAGACCTGCAGCTGGCT...GGGGACCCCAGGTCCTGCCGCCCTGCCCGAGCCCCTAGCTGTATATACACTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGCTGGTAGCAGACATTTaGGAAGGTGGTAGCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRLVADI*EGGSIQ Trigger: TTGGATGCTACCACCTTCCAAAATGTCTGCTACCAG...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS-3UTR CAA 90 bp | GAGCTTAGCCCAAGACATGCAGAAGATGGGGAGCCCCTAGTGGGAGGAAGTCGGGGCTGCAATATTTTCTaGCACCCATTGCAAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ELSPRHAEDGEPLVGGSRGCNIF*HPLQGK Trigger: CTTGCCTTGCAATGGGTGCAAGAAAATATTGCAGCC...CCGACTTCCTCCCACTAGGGGCTCCCCATCTTCTGCATGTCTTGGGCTAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
||
| CDS CCA 72 bp | CACCTGGGGGACAGCCCACAAGGCGGGCCAGCAGTGTaGCCCTGCGCCTGGCCTCTCCAGCACTCACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLGDSPQGGPAV*PCAWPLQHSQW Trigger: CCACTGTGAGTGCTGGAGAGGCCAGGCGCAGGGCCACACTGCTGGCCCGCCTTGTGGGCTGTCCCCCAGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CCA 72 bp | ACCCGGGCCCCTTGGGCAGCCAGTCGCCCAGCCAGCTaGGCCACAGGGCACACAACGTTGTGGTCGCCTACC | + |
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Preference number: 6 (lower is better) Translates to: TRAPWAASRPAS*ATGHTTLWSPT Trigger: GGTAGGCGACCACAACGTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCGACTGGCTGCCCAAGGGGCCCGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS GCA 72 bp | AAGCTGAGACTGGGCCTCCAGGGGCCTTCAGGCGGATaGCCCTCAGCTGGCCCCCTCGAACCCTCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KLRLGLQGPSGG*PSAGPLEPSPA Trigger: TGCTGGTGAGGGTTCGAGGGGGCCAGCTGAGGGGCATCCGCCTGAAGGCCCCTGGAGGCCCAGTCTCAGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CCA 72 bp | GGCTATCAGCTCGGTGTCATTGCCACCAGCGCCACCTaGGGGACAGCCCACAAGGCGGGCCAGCAGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GYQLGVIATSAT*GTAHKAGQQCG Trigger: GCCACACTGCTGGCCCGCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGATAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS GCA 72 bp | CTGTGGAAGAGGCTCCTGCTGGGCAGGGACAGTATGTaGATGCCCACGGAGGCTGCACCCGCACTCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LWKRLLLGRDSM*MPTEAAPALSP Trigger: TGGGGAGAGTGCGGGTGCAGCCTCCGTGGGCATGCACATACTGTCCCTGCCCAGCAGGAGCCTCTTCCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS GCA 72 bp | CTCCAGCACTCACAGTGGCCCAGGGCCCATTGGGTGTaGCACTCTGGAGGACAGCCCTGTGGAAGAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LQHSQWPRAHWV*HSGGQPCGRGS Trigger: GGAGCCTCTTCCACAGGGCTGTCCTCCAGAGTGGCACACCCAATGGGCCCTGGGCCACTGTGAGTGCTGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CCA 72 bp | TGCAGGACCACAGCCTCGGCTGCCAGGTCACTTGCTTaGGGTACACCGATCCGCACCCCAGCCAGGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: CRTTASAARSLA*GTPIRTPARNW Trigger: CCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 72 bp | ACGGTGTTCAAAGATGTAGGCATAGACCCGGGCCCCTaGGGCAGCCAGTCGCCCAGCCAGCTGGGCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: TVFKDVGIDPGP*GSQSPSQLGHR Trigger: CCTGTGGCCCAGCTGGCTGGGCGACTGGCTGCCCAAGGGGCCCGGGTCTATGCCTACATCTTTGAACACCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 90 bp | GAGGCAGGACGTGCCACTCGTGGTCCACCAGGTCCTGAGCGGGCCTaGTCCTCAAGCAGGCTATCAGCTCGGTGTCATTGCCACCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: EAGRATRGPPGPERA*SSSRLSARCHCHQR Trigger: GCGCTGGTGGCAATGACACCGAGCTGATAGCCTGCTTGAGGACAAGGCCCGCTCAGGACCTGGTGGACCACGAGTGGCACGTCCTGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 90 bp | GTCTGTGTAATGCAGGACCACAGCCTCGGCTGCCAGGTCACTTGCTaGGGGTACACCGATCCGCACCCCAGCCAGGAACTGGGCCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VCVMQDHSLGCQVTC*GYTDPHPSQELGPA Trigger: AGCCGGGCCCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCATTACACAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 90 bp | GCCAGTCTGTGTAATGCAGGACCACAGCCTCGGCTGCCAGGTCACTaGCTTGGGGTACACCGATCCGCACCCCAGCCAGGAACTGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ASLCNAGPQPRLPGH*LGVHRSAPQPGTGP Trigger: GGGCCCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCATTACACAGACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 90 bp | TGTGGAGGCACGGTGTTCAAAGATGTAGGCATAGACCCGGGCCCCTaGGGCAGCCAGTCGCCCAGCCAGCTGGGCCACAGGGCACACAAC | + |
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Preference number: 6 (lower is better) Translates to: CGGTVFKDVGIDPGP*GSQSPSQLGHRAHN Trigger: GTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCGACTGGCTGCCCAAGGGGCCCGGGTCTATGCCTACATCTTTGAACACCGTGCCTCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS GCA 72 bp | GCCTTGTCCTCAAGCAGGCTATCAGCTCGGTGTCATTaGCACCAGCGCCACCTGGGGGACAGCCCACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ALSSSRLSARCH*HQRHLGDSPQG Trigger: GCCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGATAGCCTGCTTGAGGACAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CCA 72 bp | CGCCCAGCCAGCTGGGCCACAGGGCACACAACGTTGTaGTCGCCTACCACTGCACTCATGGCATCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPASWATGHTTL*SPTTALMASLR Trigger: CCTGAGAGATGCCATGAGTGCAGTGGTAGGCGACCACAACGTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 72 bp | GGCCTTGTCCTCAAGCAGGCTATCAGCTCGGTGTCATaGCCACCAGCGCCACCTGGGGGACAGCCCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: GLVLKQAISSVS*PPAPPGGQPTR Trigger: CCTTGTGGGCTGTCCCCCAGGTGGCGCTGGTGGCAATGACACCGAGCTGATAGCCTGCTTGAGGACAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 72 bp | ATGCAGGACCACAGCCTCGGCTGCCAGGTCACTTGCTaGGGGTACACCGATCCGCACCCCAGCCAGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: MQDHSLGCQVTC*GYTDPHPSQEL Trigger: CAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 72 bp | CGTGCCACTCGTGGTCCACCAGGTCCTGAGCGGGCCTaGTCCTCAAGCAGGCTATCAGCTCGGTGTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: RATRGPPGPERA*SSSRLSARCHC Trigger: GCAATGACACCGAGCTGATAGCCTGCTTGAGGACAAGGCCCGCTCAGGACCTGGTGGACCACGAGTGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 72 bp | TGTAATGCAGGACCACAGCCTCGGCTGCCAGGTCACTaGCTTGGGGTACACCGATCCGCACCCCAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CNAGPQPRLPGH*LGVHRSAPQPG Trigger: TCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGCAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCATTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 72 bp | AGTCGCCCAGCCAGCTGGGCCACAGGGCACACAACGTaGTGGTCGCCTACCACTGCACTCATGGCATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRPASWATGHTT*WSPTTALMASL Trigger: GAGAGATGCCATGAGTGCAGTGGTAGGCGACCACAACGTTGTGTGCCCTGTGGCCCAGCTGGCTGGGCGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS GCA 72 bp | GGCCACAGGGCACACAACGTTGTGGTCGCCTACCACTaGACTCATGGCATCTCTCAGGTGAGTAGGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GHRAHNVVVAYH*THGISQVSRVL Trigger: GAGGACCCTACTCACCTGAGAGATGCCATGAGTGCAGTGGTAGGCGACCACAACGTTGTGTGCCCTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CCA 72 bp | GCTTGGGGTACACCGATCCGCACCCCAGCCAGGAACTaGGCCCGGCTGATGAGAGATTCATTGTCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: AWGTPIRTPARN*ARLMRDSLSLL Trigger: CAGCAAAGACAATGAATCTCTCATCAGCCGGGCCCAGTTCCTGGCTGGGGTGCGGATCGGTGTACCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 |
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| CDS CAA 90 bp | GTCCCCGTCTACCACAGGCACGAAGGAAAATCGGAAGATACTTTCTaGAGGCAGGACGTGCCACTCGTGGTCCACCAGGTCCTGAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VPVYHRHEGKSEDTF*RQDVPLVVHQVLSG Trigger: CCCGCTCAGGACCTGGTGGACCACGAGTGGCACGTCCTGCCTCAAGAAAGTATCTTCCGATTTTCCTTCGTGCCTGTGGTAGACGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS TCA 72 bp | CCGCTCCGCTGTAGAAACCACCCCCATAGATCCAGATaGGGACAGGTGTGGGAGAAGCAGGTCTGGGGTATG | + |
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Preference number: 6 (lower is better) Translates to: PLRCRNHPHRSR*GQVWEKQVWGM Trigger: CATACCCCAGACCTGCTTCTCCCACACCTGTCCTCATCTGGATCTATGGGGGTGGTTTCTACAGCGGAGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 72 bp | AAGGTGGTAGCATCCAACACTCCTGACCAGGGCCGCTaGGGCTCTGGTGGCATAAATCTACGTGAGCCCACA | + |
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Preference number: 6 (lower is better) Translates to: KVVASNTPDQGR*GSGGINLREPT Trigger: TGTGGGCTCACGTAGATTTATGCCACCAGAGCCCAAGCGGCCCTGGTCAGGAGTGTTGGATGCTACCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 90 bp | ACATTTTGGAAGGTGGTAGCATCCAACACTCCTGACCAGGGCCGCTaGGGCTCTGGTGGCATAAATCTACGTGAGCCCACAGGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TFWKVVASNTPDQGR*GSGGINLREPTGGS Trigger: AGAGCCACCTGTGGGCTCACGTAGATTTATGCCACCAGAGCCCAAGCGGCCCTGGTCAGGAGTGTTGGATGCTACCACCTTCCAAAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS GCA 72 bp | ATTGCAAGGCAAGCCGTTGATCCAGCAGACCTACATTaGCAGGGGCTTCTCTGCTTCCTGGTAGGGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IARQAVDPADLH*QGLLCFLVGPR Trigger: TCTTGGCCCTACCAGGAAGCAGAGAAGCCCCTGGCAATGTAGGTCTGCTGGATCAACGGCTTGCCTTGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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| CDS CAA 72 bp | TACCACAGGCACGAAGGAAAATCGGAAGATACTTTCTaGAGGCAGGACGTGCCACTCGTGGTCCACCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: YHRHEGKSEDTF*RQDVPLVVHQV Trigger: GACCTGGTGGACCACGAGTGGCACGTCCTGCCTCAAGAAAGTATCTTCCGATTTTCCTTCGTGCCTGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024099.11 ENSMUST00000085934.4 ENSMUST00000196208.5 |
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