Pregenerated sensors for ACER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030760Ensembl transcript IDs: ENSMUST00000033020.14, ENSMUST00000120520.8, ENSMUST00000137899.2, ENSMUST00000151258.8
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCATGGTGAAAGGAGCTGGGGTGGGGCACTCTGCCTTGGGCCCTaGCAGTGCAGGACACCTACCTACTACCCAACATTAACTACCACC | + |
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Preference number: 1 (lower is better) Translates to: AHGERSWGGALCLGP*QCRTPTYYPTLTTT Trigger: GGTGGTAGTTAATGTTGGGTAGTAGGTAGGTGTCCTGCACTGTCAGGGCCCAAGGCAGAGTGCCCCACCCCAGCTCCTTTCACCATGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR GCA 90 bp | AGCTCTCTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTACTGGATCAAAGGCGTGTGTCATCACG | + |
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Preference number: 1 (lower is better) Translates to: SSLCRPGWPRTQKSA*LCLPSTGSKACVIT Trigger: CGTGATGACACACGCCTTTGATCCAGTACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | AAGGGGTCATGCAGAGCAGCTGAGGCTCGGCACTGTGAGAGGCCATaGAAGGCCATTGGTGAAGGTGCAGCCTCAGTTGCAATTGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: KGSCRAAEARHCERP*KAIGEGAASVAIEG Trigger: GCCTTCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTTCCATGGCCTCTCACAGTGCCGAGCCTCAGCTGCTCTGCATGACCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | CCACCATGCCCCTCATTCACACAGCTGAATTTGCCTGCCAAATCCTaGGCCAGGACAGAGACCTGCTCCTGTGCTTTTAGCAACCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: PPCPSFTQLNLPAKS*ARTETCSCAFSNLH Trigger: GTGCAGGTTGCTAAAAGCACAGGAGCAGGTCTCTGTCCTGGCCCAGGATTTGGCAGGCAAATTCAGCTGTGTGAATGAGGGGCATGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | AGTAGCATGCATGCTCCTGGAGCTGACAGTTTGATGGGTTTCAAGTaGACAGGGCCTGAGGCAGATGGAAGGCATCCCTCAGCAGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SSMHAPGADSLMGFK*TGPEADGRHPSAAL Trigger: AAGAGCTGCTGAGGGATGCCTTCCATCTGCCTCAGGCCCTGTTCACTTGAAACCCATCAAACTGTCAGCTCCAGGAGCATGCATGCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR GCA 90 bp | GAGGCAGATGGAAGGCATCCCTCAGCAGCTCTTAGCTGTTTCATGTaGATTTCCAGGACAACTGAAGAGGCCCATGGTGAAAGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: EADGRHPSAALSCFM*ISRTTEEAHGERSW Trigger: CCAGCTCCTTTCACCATGGGCCTCTTCAGTTGTCCTGGAAATGCACATGAAACAGCTAAGAGCTGCTGAGGGATGCCTTCCATCTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR GCA 90 bp | TTAGGGCTACTCCCAACAGCCTTTAACTACAGCAATGCACTCTTCTaGCTCTTGAGCTGCCCCCACCCGACCCCTACCCATGGAATATGT | + |
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Preference number: 1 (lower is better) Translates to: LGLLPTAFNYSNALF*LLSCPHPTPTHGIC Trigger: ACATATTCCATGGGTAGGGGTCGGGTGGGGGCAGCTCAAGAGGCAGAAGAGTGCATTGCTGTAGTTAAAGGCTGTTGGGAGTAGCCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR GCA 90 bp | AGTGCTCATGGGATGAATTGGAGGCAGAATGAATTGTTGCCACTGTaGCTGGGCATACAGAGCATCTGGGCCCAAGTCATGGAAATGGGG | + |
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Preference number: 1 (lower is better) Translates to: SAHGMNWRQNELLPL*LGIQSIWAQVMEMG Trigger: CCCCATTTCCATGACTTGGGCCCAGATGCTCTGTATGCCCAGGCACAGTGGCAACAATTCATTCTGCCTCCAATTCATCCCATGAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | TACTCCCAACAGCCTTTAACTACAGCAATGCACTCTTCTGCCTCTTaGGCTGCCCCCACCCGACCCCTACCCATGGAATATGTTAAACCT | + |
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Preference number: 1 (lower is better) Translates to: YSQQPLTTAMHSSAS*AAPTRPLPMEYVKP Trigger: AGGTTTAACATATTCCATGGGTAGGGGTCGGGTGGGGGCAGCTCAAGAGGCAGAAGAGTGCATTGCTGTAGTTAAAGGCTGTTGGGAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | AGCCAGGAGTTAAGAAGATCCTTTGGAACTGGAGTTACAGACAGTTaGAGCTGCCTGATGTGGGTGCTGGGAAGTAAGCCTGGGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SQELRRSFGTGVTDS*SCLMWVLGSKPGSS Trigger: AGAAGACCCAGGCTTACTTCCCAGCACCCACATCAGGCAGCTCCAACTGTCTGTAACTCCAGTTCCAAAGGATCTTCTTAACTCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | CAAAAGCCCAAGCTAGACCCAATGACTTTCTCTCTCTGCTGCCTTTaGATGCAGATGGAGAACTCTCAGCTTCCATGTCTGCCTGCTTGC | + |
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Preference number: 1 (lower is better) Translates to: QKPKLDPMTFSLCCL*MQMENSQLPCLPAC Trigger: GCAAGCAGGCAGACATGGAAGCTGAGAGTTCTCCATCTGCATTCAAAGGCAGCAGAGAGAGAAAGTCATTGGGTCTAGCTTGGGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | CATTTTGCAAACCTTCAGCCAGGAGTTAAGAAGATCCTTTGGAACTaGAGTTACAGACAGTTGGAGCTGCCTGATGTGGGTGCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: HFANLQPGVKKILWN*SYRQLELPDVGAGK Trigger: CTTCCCAGCACCCACATCAGGCAGCTCCAACTGTCTGTAACTCCAGTTCCAAAGGATCTTCTTAACTCCTGGCTGAAGGTTTGCAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | GTAGAGGGTAGCTGTGGGGAGCAGGTTATTACGGGGCTGGTGATGTaGACTAACCACTGTAGCATTGGCCATATACAACCATTACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: VEGSCGEQVITGLVM*TNHCSIGHIQPLQK Trigger: TTTTTGTAATGGTTGTATATGGCCAATGCTACAGTGGTTAGTCCACATCACCAGCCCCGTAATAACCTGCTCCCCACAGCTACCCTCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | GCCCACAGTGCATTTATTTCCCATCAACCTAATCAGGGGCAAGCATaGATCTTGACCTATATCCTGCTCCTGTACCTCCTTCTCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: AHSAFISHQPNQGQA*ILTYILLLYLLLTS Trigger: ACTTGTGAGAAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAATAAATGCACTGTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | ATTGAACCCAGGTTCTCTGCAAGTCCAACAAATGCCCCTGATTGCTaGGCTATCACTGCACTCTATTGCCACGCCGACTTTAAAACATGT | + |
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Preference number: 1 (lower is better) Translates to: IEPRFSASPTNAPDC*AITALYCHADFKTC Trigger: ACATGTTTTAAAGTCGGCGTGGCAATAGAGTGCAGTGATAGCTCAGCAATCAGGGGCATTTGTTGGACTTGCAGAGAACCTGGGTTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | GTGCATTTATTTCCCATCAACCTAATCAGGGGCAAGCATGGATCTTaGCCTATATCCTGCTCCTGTACCTCCTTCTCACAAGTGAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VHLFPINLIRGKHGS*PISCSCTSFSQVSK Trigger: CTTGCTCACTTGTGAGAAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAATAAATGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | GAGGTCAGAGAACAACTTTCAGGAGTTAGTTCTCTTTCCACCACATaGATCCCAAGGATCGAACTCAGGTCCTCAGGCTTAGTATATGAG | + |
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Preference number: 1 (lower is better) Translates to: EVREQLSGVSSLSTT*IPRIELRSSGLVYE Trigger: CTCATATACTAAGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAACTCCTGAAAGTTGTTCTCTGACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | GTCCTGACTTCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCTAACTTGCTTCCTGGTCATGATGTT | + |
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Preference number: 1 (lower is better) Translates to: VLTSFGDEQQYGSVS*INPFLPNLLPGHDV Trigger: AACATCATGACCAGGAAGCAAGTTAGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATACTGCTGTTCATCACCAAAGGAAGTCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR GCA 90 bp | AAGATGGACTCAGGCCAGTTTCCAGGAAATGGGCACGTCTTGTTTTaGAGAAGCTTTAAAAGTCAAAGCCCACAGTGCATTTATTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KMDSGQFPGNGHVLF*RSFKSQSPQCIYFP Trigger: TGGGAAATAAATGCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAAACTGGCCTGAGTCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | TTCATCTCTTGTGATGGGCATGGTGTCTTCAAATGTACAAGTCTTTaGGGGGTTCTTGACCATCTTGGCAGAACTACATACAGTAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: FISCDGHGVFKCTSL*GVLDHLGRTTYSRC Trigger: ACACCTACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCCCCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACAAGAGATGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| 3UTR CCA 90 bp | CCAAATGAATTAAAGGAAGCTTTAATTAAACACTGGCCAGGAAGATaGACTCAGGCCAGTTTCCAGGAAATGGGCACGTCTTGTTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: PNELKEALIKHWPGR*TQASFQEMGTSCFA Trigger: TGCAAAACAAGACGTGCCCATTTCCTGGAAACTGGCCTGAGTCCATCTTCCTGGCCAGTGTTTAATTAAAGCTTCCTTTAATTCATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | CACAATTTTGAGCCAAATGAATTAAAGGAAGCTTTAATTAAACACTaGCCAGGAAGATGGACTCAGGCCAGTTTCCAGGAAATGGGCACG | + |
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Preference number: 1 (lower is better) Translates to: HNFEPNELKEALIKH*PGRWTQASFQEMGT Trigger: CGTGCCCATTTCCTGGAAACTGGCCTGAGTCCATCTTCCTGGCCAGTGTTTAATTAAAGCTTCCTTTAATTCATTTGGCTCAAAATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | CCTCATGAAGCTGTTACCATGTGGAAATATAATATTTGGTCAAACTaGATCTGTTCCGAGGTGTACTGGCTAGTTTTGTGTCAACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: PHEAVTMWKYNIWSN*ICSEVYWLVLCQLD Trigger: GTCAAGTTGACACAAAACTAGCCAGTACACCTCGGAACAGATTCAGTTTGACCAAATATTATATTTCCACATGGTAACAGCTTCATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | ACATATTCTCTGGCTGCTTGTTTTCCCAATTCTAGTTCTACAAGATaGTCCAAGAAGTTCCTATTGCTTGAAGAGATGAATCTATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: TYSLAACFPNSSSTR*SKKFLLLEEMNLCL Trigger: CAGACATAGATTCATCTCTTCAAGCAATAGGAACTTCTTGGACCATCTTGTAGAACTAGAATTGGGAAAACAAGCAGCCAGAGAATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR TCA 90 bp | GATTCTGGTGGTTTGAATACGAATGGCTCCCATTGGCTTACACAGTaGATGTTTAGTCATCAAGGAATAGCACTATTTAAAAAGATTAGG | + |
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Preference number: 1 (lower is better) Translates to: DSGGLNTNGSHWLTQ*MFSHQGIALFKKIR Trigger: CCTAATCTTTTTAAATAGTGCTATTCCTTGATGACTAAACATTCACTGTGTAAGCCAATGGGAGCCATTCGTATTCAAACCACCAGAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CCA 90 bp | GATGGAGGTAAGATTTCTGTTAAGGCTGAGATACATCTAGAATGGTaGTTATATTTGCCAAAGGTCTTGAAGTTGAACTTTCTTTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: DGGKISVKAEIHLEW*LYLPKVLKLNFLSL Trigger: TAGGGAAAGAAAGTTCAACTTCAAGACCTTTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATCTTACCTCCATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 90 bp | GCAGAGCAGCTGAGGCTCGGCACTGTGAGAGGCCATGGAAGGCCATaGGTGAAGGTGCAGCCTCAGTTGCAATTGAAGGCCCAGGACGGA | + |
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Preference number: 2 (lower is better) Translates to: AEQLRLGTVRGHGRP*VKVQPQLQLKAQDG Trigger: TCCGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTTCCATGGCCTCTCACAGTGCCGAGCCTCAGCTGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTTGTTGCCACTGTGCCTaGGCATACAGAGCATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFCCHCA*AYRASG Trigger: CCCAGATGCTCTGTATGCCCAGGCACAGTGGCAACA...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 90 bp | TTAGGAGGTGTGGCCTTGGAGGAGGTGTGTCACTGGGGGTGGGCTTaGAGGTTTCAAAAGCCCAAGCTAGACCCAATGACTTTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LGGVALEEVCHWGWA*RFQKPKLDPMTFSL Trigger: GAGAGAGAAAGTCATTGGGTCTAGCTTGGGCTTTTGAAACCTCAAAGCCCACCCCCAGTGACACACCTCCTCCAAGGCCACACCTCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR TCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTATTTCCCACAACAGTaGGCCACCTTTAGGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSYFPQQ*ATFRCW Trigger: CCAGCACCTAAAGGTGGCTCACTGTTGTGGGAAATA...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTACCACAGGGGGTGAATaGCTGAGAAGGTATGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFTTGGE*LRRYEW Trigger: CCACTCATACCTTCTCAGCCATTCACCCCCTGTGGT...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR TCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTCAGGGGGTGAATGGCTaGGAAGGTATGAGTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLQGVNG*EGMSGS Trigger: AGAGCCACTCATACCTTCTCAGCCATTCACCCCCTG...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR GCA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCAACCCAACAGGCCAATTaGCCATTCTCTATGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: YPTGQLPILYGWVIQAESTQQAN*PFSMAG Trigger: CCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGT...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTTCCTGCTTTCTGACCTaGTTGAGTTCCAGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFSCFLT*LSSSPD Trigger: GTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGA...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR GCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTGGCAGAATGAATTGTTaGCACTGTGCCTGGGCATAC | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFGRMNC*HCAWAY Trigger: GTATGCCCAGGCACAGTGGCAACAATTCATTCTGCC...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACTGGGGCACTCTGCCTTaGGCCCTGACAGTGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHWGTLP*ALTVQD Trigger: GTCCTGCACTGTCAGGGCCCAAGGCAGAGTGCCCCA...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 90 bp | CACACCTTATTCAGTGCTCATGGGATGAATTGGAGGCAGAATGAATaGTTGCCACTGTGCCTGGGCATACAGAGCATCTGGGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: HTLFSAHGMNWRQNE*LPLCLGIQSIWAQV Trigger: GACTTGGGCCCAGATGCTCTGTATGCCCAGGCACAGTGGCAACAATTCATTCTGCCTCCAATTCATCCCATGAGCACTGAATAAGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTTTCTGGAAAAGCTTCTaGAGGGGTGTTGGATGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LVLFPPHGSQGSNSGPQAFWKSF*RGVGWP Trigger: GGGCCATCCAACACCCCTTCAGAAGCTTTTCCAGAA...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR GCA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCAGATGACACGGCTAAGTaGTGGCTCACAGTCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: YPTGQLPILYGWVIQAESDDTAK*WLTVNH Trigger: ATGGTTGACTGTGAGCCAGCACTTAGCCGTGTCATC...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCCCATTCATGTGTCTCTaGTCCAGTTCTTGTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSPFMCL*SSSCSR Trigger: TCTGGAACAAGAACTGGACCAGAGACACATGAATGG...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTGTCATTCATCTCTTGTaGTGGGCATGGTGTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFVIHLL*WAWCLQ Trigger: TTGAAGACACCATGCCCATCACAAGAGATGAATGAC...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGGGCCACAGAGTCCAAGACAAAATCTTGAATGTGATGAGAACAGAGCCGATGACACGGCTAAGTaGTGGCTCACAGTCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: GCGPQSPRQNLECDENRADDTAK*WLTVNH Trigger: ATGGTTGACTGTGAGCCAGCACTTAGCCGTGTCATC...GGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTAGGCATTGGATCCCCTaGAACCAGAATTACAATGGT | + |
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Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFRHWIP*NQNYNG Trigger: ACCATTGTAATTCTGGTTCCAGGGGATCCAATGCCT...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCATTTGGCACCCCAGATaGTTTTGTTTGATACCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSIWHPR*FCLIPV Trigger: CACAGGTATCAAACAAAACCATCTGGGGTGCCAAAT...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 90 bp | AGGGCAAACGAGATAAAGCCAGGAGCTAAATACCCAACAGGCCAATaGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCATTCATC | + |
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Preference number: 2 (lower is better) Translates to: RANEIKPGAKYPTGQ*PILYGWVIQAESFI Trigger: GATGAATGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTCGTTTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| 3UTR CAA 90 bp | TCAAAAGCCCAAGCTAGACCCAATGACTTTCTCTCTCTGCTGCCTTaGAATGCAGATGGAGAACTCTCAGCTTCCATGTCTGCCTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SKAQARPNDFLSLLP*NADGELSASMSACL Trigger: CAAGCAGGCAGACATGGAAGCTGAGAGTTCTCCATCTGCATTCAAAGGCAGCAGAGAGAGAAAGTCATTGGGTCTAGCTTGGGCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTGATGGCCCACCCCTTTaGTTGGCTGTGGGCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVDGPPL*LAVGHR Trigger: TCTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATC...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGCATCAGTGCTTCCTCTaGGGTTCAAACATGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LNTQQANCPFSMAGSFRLHQCFL*GSNMTA Trigger: AGCAGTCATGTTTGAACCTCAGAGGAAGCACTGATG...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCACCCAACAGGCCAATTaGCCATTCTCTATGGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCTQQAN*PFSMAG Trigger: CCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGT...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACACAGACAGTTGGAGCTaGCTGATGTGGGTGCTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHTDSWS*LMWVLG Trigger: TCCCAGCACCCACATCAGGCAGCTCCAACTGTCTGT...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTGTCAGAAGAAGGCATTaGATCCCCTGGAACCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LVLFPPHGSQGSNSGPQAVRRRH*IPWNQN Trigger: ATTCTGGTTCCAGGGGATCCAATGCCTTCTTCTGAC...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTTTTTGGGGAGGACTGTaGAAAGACTTTGGAACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFFWGGL*KDFGTL Trigger: CAAAGTTCCAAAGTCTTTCCACAGTCCTCCCCAAAA...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCTCTGGGCCCAAGTCATaGAAATGGGGGTGGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCSGPKS*KWGWEK Trigger: CTTTTCCCACCCCCATTTCCATGACTTGGGCCCAGA...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | AATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTGTCATTCATCTCTTGTaGTGGGCATGGTGTCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: NTQQANCPFSMAGSFRLSVIHLL*WAWCLQ Trigger: TTGAAGACACCATGCCCATCACAAGAGATGAATGAC...ACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCACTAAAGCCAGAGGGTaGAGGAAATATTTTTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSTKARG*RKYFWF Trigger: AAACCAAAAATATTTCCTTCACCCTCTGGCTTTAGT...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTCTGTGCTTTCTGCCCTaGCTGTTCTCTATCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVLFPPHGSQGSNSGPQALCFLP*LFSIKE Trigger: TTCTTTGATAGAGAACAGTCAGGGCAGAAAGCACAG...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGAGGCCTGGCTTGTaGAATTTCAGAGGGAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLWRPGL*NFRGKI Trigger: AATTTTCCCTCTGAAATTTCACAAGCCAGGCCTCCA...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTAAAATCACAGAGATCTaGCTATCTCTGCCTTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RPAPVLLATCTSLLGTTFKITEI*LSLPFK Trigger: CTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTT...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGTATGTGTACAATGTaGATGTCTGGTGCCAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLCMCTM*MSGASR Trigger: TCTGCTGGCACCAGACATGCACATTGTACACATACA...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGGTTCAAACATGACTaGTGGCCAGATTCCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LNTQQANCPFSMAGSFRLRFKHD*WPDSKE Trigger: CTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCT...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTGCAGGTGAGCAGAGCTaGGAAGACTGCCATCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVAGEQS*EDCHQE Trigger: CTCCTGATGGCAGTCTTCCCAGCTCTGCTCACCTGC...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTCAAGAAGTCTGTGATTaGACCAAGAAAAGGGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLQEVCD*TKKREA Trigger: TGCCTCCCTTTTCTTGGTCCAATCACAGACTTCTTG...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTAGATCTGCCTATCTCTaGCTTTCAAGTGCTGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: LVLFPPHGSQGSNSGPQARSAYL*LSSAVI Trigger: AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCT...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGGAGAAACTTCACTTTTaGCCTGTACCTCAGGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LNTQQANCPFSMAGSFRLEKLHF*PVPQVK Trigger: CTTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTC...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR CAA 90 bp | AGTGCATTTATTTCCCATCAACCTAATCAGGGGCAAGCATGGATCTaGACCTATATCCTGCTCCTGTACCTCCTTCTCACAAGTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SAFISHQPNQGQAWI*TYILLLYLLLTSEQ Trigger: TTGCTCACTTGTGAGAAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAATAAATGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | ATCTATGCCTATGATCAAAGTACAACTAAGGTCTTCTTATGTTTTGGCATGTCTGATGGCCCACCCCTTTaGTTGGCTGTGGGCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: IYAYDQSTTKVFLCFGMSDGPPL*LAVGHR Trigger: TCTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATC...AGACATGCCAAAACATAAGAAGACCTTAGTTGTACTTTGATCATAGGCATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTTATGTACATATGTTCTaGCACCTAACCATGGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LVLFPPHGSQGSNSGPQAYVHMF*HLTMEL Trigger: AAGCTCCATGGTTAGGTGCCAGAACATATGTACATA...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTAGGGGTCAATTGTACTaGCTAGTTTTGTGTCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLRGQLY*LVLCQL Trigger: AAGTTGACACAAAACTAGCCAGTACAATTGACCCCT...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACTCTCTTTCCACCACATaGATCCCAAGGATCGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHSLSTT*IPRIEL Trigger: GAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGA...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACGCCATGGCACATGAGTaGAGGTCAGAGAACAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHAMAHE*RSENNF Trigger: AAAGTTGTTCTCTGACCTCCACTCATGTGCCATGGC...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACCTCCTTCTTCCCCGTTaGTGGTGGCTTATAGTGATT | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHLLLPR*WWLIVI Trigger: AATCACTATAAGCCACCACCAACGGGGAAGAAGGAG...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCCCTTGTGGGTAAGACTATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGATTTATTTTGAGTTGGTaGGTAGATAGCAGTATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RPLVGKTISGLVVLGSIRFILSW*VDSSMV Trigger: CACCATACTGCTATCTACTCACCAACTCAAAATAAA...TCTTATAGAACCCAAGACTACCAGCCCAGAGATAGTCTTACCCACAAGGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCCCCTTTGATCTGTATTaGGTTGTGTTGTGTGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCPFDLY*VVLCVC Trigger: GCATACACACAACACAACTCAATACAGATCAAAGGG...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR-3UTR GCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTTTGCTGAGCTATCACTaGACTCTATTGCCACGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVLLSYH*TLLPRR Trigger: TCGGCGTGGCAATAGAGTGCAGTGATAGCTCAGCAA...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGTTGTGTTGTGTGTATaGTTCTGGGAATTGAACTTA | + |
|
Preference number: 2 (lower is better) Translates to: LCISSCFLTCLSSSPDFLVVLCV*FWELNL Trigger: TAAGTTCAATTCCCAGAAGCATACACACAACACAAC...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCCTTCAGTTAAGGAAATaGCTCCATGAGATCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCLQLRK*LHEIQL Trigger: CAGTTGGATCTCATGGAGGCATTTCCTTAACTGAAG...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 90 bp | TGTTTGTGTGTCAAGTTGACAAGGGGTCAATTGTACTGGCTAGTTTaGTGTCAACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CLCVKLTRGQLYWLV*CQLDTAGVITEKGA Trigger: AGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAATTGACCCCTTGTCAACTTGACACACAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACACAATAAGGAACACTTaGTTCCTCCTTCCTTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHTIRNT*FLLPSL Trigger: TAGGGAAGGAAGGAGGAATCAAGTGTTCCTTATTGT...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCCCAGATGGTTTTGTTTaGTACCTGTGTAAATTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCPDGFV*YLCKFS Trigger: GCTGAATTTACACAGGTATCAAACAAAACCATCTGG...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCCCTTGTGGGTAAGACTATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAATACATCTAGAATGGTaGTTATATTTGCCAAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: RPLVGKTISGLVVLGSIRIHLEW*LYLPKV Trigger: GACCTTTGGCAAATATAACCACCATTCTAGATGTAT...TCTTATAGAACCCAAGACTACCAGCCCAGAGATAGTCTTACCCACAAGGGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTCTGGAAAGTGTTTTCTaGAAGCACAAAGAGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVLESVF*KHKEAV Trigger: CACAGCCTCTTTGTGCTTTCAGAAAACACTTTCCAG...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGGCTTGAAGATCCATTCATTGTTAAGAGCTCTGCCAGATGTTTTATAGGACTCTGTATCAGCTCCTaGTTTCTGACCTGCTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FGLEDPFIVKSSARCFIGLCISS*FLTCLS Trigger: ACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG...TCCTATAAAACATCTGGCAGAGCTCTTAACAATGAATGGATCTTCAAGCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACTTTAAAACATGTAAGTaGACATGCGTGTCTGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHFKTCK*TCVSER Trigger: TCTCTCAGACACGCATGTTCACTTACATGTTTTAAA...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAAAAGATGGAGGCTATaGAAAGATCCTATAAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FQEMGTSCFAEALKVKAHKRWRL*KDPIKS Trigger: GCTCTTTATAGGATCTTTGCATAGCCTCCATCTTTT...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGGCTTGAAGATCCATTCATTGTTAAGAGCTCTGCCAGATGTTTTATAGGACAGAAGATTGTGAGTTaGATCCCAGACATTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FGLEDPFIVKSSARCFIGQKIVS*IPDIGR Trigger: CCTTCCAATGTCTGGGATCCAACTCACAATCTTCTG...TCCTATAAAACATCTGGCAGAGCTCTTAACAATGAATGGATCTTCAAGCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR TCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTGAATTACAATGGTCATaGGCTGTAGCAGAATTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVELQWS*AVAEFF Trigger: GAAAAATTCTGCTACAGCTCATGACCATTGTAATTC...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGGCTTGAAGATCCATTCATTGTTAAGAGCTCTGCCAGATGTTTTATAGGATGTGTACTATATGTATaGCTGGTACCTTCAGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: FGLEDPFIVKSSARCFIGCVLYV*LVPSEV Trigger: GACTTCTGAAGGTACCAGGCATACATATAGTACACA...TCCTATAAAACATCTGGCAGAGCTCTTAACAATGAATGGATCTTCAAGCCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 90 bp | GCCCCAATTAAACACTTTCTTTTTATAATAGTTGCCATGGTCATGTaGTCTCTTCACAGCAATAGAACACTGACTAGGACAATGTCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: APIKHFLFIIVAMVM*SLHSNRTLTRTMSY Trigger: ATAGGACATTGTCCTAGTCAGTGTTCTATTGCTGTGAAGAGACAACATGACCATGGCAACTATTATAAAAAGAAAGTGTTTAATTGGGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTACAAGCAACATTCTTTaGTGTCACATCATAAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVTSNIL*CHIIKA Trigger: AGCTTTTATGATGTGACACCAAAGAATGTTGCTTGT...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTaGCTCCCGAGTACTGGATCAAAGGCGTGTGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACL*LPSTGSKACVI Trigger: GATGACACACGCCTTTGATCCAGTACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GGGATTTGTGACTGCCGACCACAGGGGGTGAATGGCTaGGAAGGTATGAGTGGCTCTGAGGCAGGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GICDCRPQGVNG*EGMSGSEAGEQ Trigger: CTGCTCACCTGCCTCAGAGCCACTCATACCTTCTCAGCCATTCACCCCCTGTGGTCGGCAGTCACAAATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GAAAGGAGCTGGGGTGGGGCACTCTGCCTTGGGCCCTaGCAGTGCAGGACACCTACCTACTACCCAACATTA | + |
|
Preference number: 3 (lower is better) Translates to: ERSWGGALCLGP*QCRTPTYYPTL Trigger: TAATGTTGGGTAGTAGGTAGGTGTCCTGCACTGTCAGGGCCCAAGGCAGAGTGCCCCACCCCAGCTCCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCCCGAGTACTGGATCAAAGGCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSTGSKAC Trigger: ACACGCCTTTGATCCAGTACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | CCAGGTGGTACTGGTTTTGAAGGCATGAAGGGGTCATaGAGAGCAGCTGAGGCTCGGCACTGTGAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PGGTGFEGMKGS*RAAEARHCERP Trigger: TGGCCTCTCACAGTGCCGAGCCTCAGCTGCTCTGCATGACCCCTTCATGCCTTCAAAACCAGTACCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | GAGTACAGGCATCTGGAGCCTAGAGGACGACTCGTGTaGTACAAAGGGCATGGCTGGAGAAGAGACCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EYRHLEPRGRLV*YKGHGWRRDPS Trigger: GCTTGGGTCTCTTCTCCAGCCATGCCCTTTGTAGCACACGAGTCGTCCTCTAGGCTCCAGATGCCTGTACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | CTCCCAACAGCCTTTAACTACAGCAATGCACTCTTCTaGCTCTTGAGCTGCCCCCACCCGACCCCTACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LPTAFNYSNALF*LLSCPHPTPTH Trigger: ATGGGTAGGGGTCGGGTGGGGGCAGCTCAAGAGGCAGAAGAGTGCATTGCTGTAGTTAAAGGCTGTTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | GCCAGGGGAGGCAAGCCAGTAAAGAACATCCCTCCATaGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ARGGKPVKNIPP*PLYQLLLSDLL Trigger: AAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCTCCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | CACCAAAAGCAACAGCAGCAGTGGAGTACAGGCATCTaGAGCCTAGAGGACGACTCGTGTGCTACAAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HQKQQQQWSTGI*SLEDDSCATKG Trigger: GCCCTTTGTAGCACACGAGTCGTCCTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGTTGCTTTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CATGCTCCTGGAGCTGACAGTTTGATGGGTTTCAAGTaGACAGGGCCTGAGGCAGATGGAAGGCATCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HAPGADSLMGFK*TGPEADGRHPS Trigger: TGAGGGATGCCTTCCATCTGCCTCAGGCCCTGTTCACTTGAAACCCATCAAACTGTCAGCTCCAGGAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CAGCCTTTAACTACAGCAATGCACTCTTCTGCCTCTTaGGCTGCCCCCACCCGACCCCTACCCATGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: QPLTTAMHSSAS*AAPTRPLPMEY Trigger: ATATTCCATGGGTAGGGGTCGGGTGGGGGCAGCTCAAGAGGCAGAAGAGTGCATTGCTGTAGTTAAAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | TACAAAGGGCATGGCTGGAGAAGAGACCCAAGCCCTTaGAGGAGCCCAGAAGATTGTGAGTTGGATCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: YKGHGWRRDPSP*RSPEDCELDPR Trigger: TCTGGGATCCAACTCACAATCTTCTGGGCTCCTCCAAGGGCTTGGGTCTCTTCTCCAGCCATGCCCTTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | AGATTAGGAGGTGTGGCCTTGGAGGAGGTGTGTCACTaGGGGTGGGCTTTGAGGTTTCAAAAGCCCAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLGGVALEEVCH*GWALRFQKPKL Trigger: TAGCTTGGGCTTTTGAAACCTCAAAGCCCACCCCCAGTGACACACCTCCTCCAAGGCCACACCTCCTAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCGGATGGCCCACCCCTTaGATTGGCTGTGGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCGWPTP*IGCGPQ Trigger: CTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATCC...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AGGGTAGCTGTGGGGAGCAGGTTATTACGGGGCTGGTaGTGTGGACTAACCACTGTAGCATTGGCCATATAC | + |
|
Preference number: 3 (lower is better) Translates to: RVAVGSRLLRGW*CGLTTVALAIY Trigger: GTATATGGCCAATGCTACAGTGGTTAGTCCACATCACCAGCCCCGTAATAACCTGCTCCCCACAGCTACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCCCTTTCCTCCCTAACTaGCTTCCTGGTCATGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSPFLPN*LPGHDV Trigger: AACATCATGACCAGGAAGCAAGTTAGGGAGGAAAGG...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTAAGAGACCCAAGCCCTaGGAGGAGCCCAGAAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLFPPHGSQGSNSGPQAKRPKP*EEPRRL Trigger: CAATCTTCTGGGCTCCTCCAAGGGCTTGGGTCTCTT...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGTACCCAACAGGCCAATaGCCCATTCTCTATGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LNTQQANCPFSMAGSFRLYPTGQ*PILYGW Trigger: CCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACCTGCTCCTGTGCTTTTAGCAACCTGCACTTCCCTCTTGGGGACCACCTTTCAACTTGACCATGTTTaGGGGAGGACTGTGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RPAPVLLATCTSLLGTTFQLDHV*GRTVER Trigger: TCTTTCCACAGTCCTCCCCAAAACATGGTCAAGTTG...AAAGGTGGTCCCCAAGAGGGAAGTGCAGGTTGCTAAAAGCACAGGAGCAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AAGAGACCCAAGCCCTTGGAGGAGCCCAGAAGATTGTaGGTTGGATCCCAGACATTGGAAGGTTGGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: KRPKPLEEPRRL*VGSQTLEGWRL Trigger: CAATCTCCAACCTTCCAATGTCTGGGATCCAACTCACAATCTTCTGGGCTCCTCCAAGGGCTTGGGTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GTCACGCAGTGTTTTGGAGATGCCAGTACCATGAGATaGCCACCAAAAGCAACAGCAGCAGTGGAGTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTQCFGDASTMR*PPKATAAVEYR Trigger: CCTGTACTCCACTGCTGCTGTTGCTTTTGGTGGTCATCTCATGGTACTGGCATCTCCAAAACACTGCGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | GGAAGGCATCCCTCAGCAGCTCTTAGCTGTTTCATGTaGATTTCCAGGACAACTGAAGAGGCCCATGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRHPSAALSCFM*ISRTTEEAHGE Trigger: TTCACCATGGGCCTCTTCAGTTGTCCTGGAAATGCACATGAAACAGCTAAGAGCTGCTGAGGGATGCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | AGCTGTGGGGAGCAGGTTATTACGGGGCTGGTGATGTaGACTAACCACTGTAGCATTGGCCATATACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SCGEQVITGLVM*TNHCSIGHIQP Trigger: TGGTTGTATATGGCCAATGCTACAGTGGTTAGTCCACATCACCAGCCCCGTAATAACCTGCTCCCCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTCCTAACAGCCTTACCTaGAGTCCTTCTCCTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LCISSCFLTCLSSSPDFLPNSLT*SPSPLT Trigger: AGTGAGAGGAGAAGGACTCAAGGTAAGGCTGTTAGG...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACCTTTCCCTGGAGCACTaGGGGATGATGGGCAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FQEMGTSCFAEALKVKAHLSLEH*GMMGKL Trigger: GAGCTTGCCCATCATCCCCAAGTGCTCCAGGGAAAG...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AGGTTCTCTGCAAGTCCAACAAATGCCCCTGATTGCTaGGCTATCACTGCACTCTATTGCCACGCCGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: RFSASPTNAPDC*AITALYCHADF Trigger: AAAGTCGGCGTGGCAATAGAGTGCAGTGATAGCTCAGCAATCAGGGGCATTTGTTGGACTTGCAGAGAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTaGCTTCCTTTGGTGATGAACAGCAGTATGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLSDLLEFQS*LPLVMNSSMEV Trigger: CACTTCCATACTGCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | CTGCCTCTTGAGCTGCCCCCACCCGACCCCTACCCATaGAATATGTTAAACCTGAGATTCACTAGAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPLELPPPDPYP*NMLNLRFTREK Trigger: TTTTTCTCTAGTGAATCTCAGGTTTAACATATTCCATGGGTAGGGGTCGGGTGGGGGCAGCTCAAGAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCAGGGTTCTTGACCATCTaGGCAGAACTACATACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YPTGQLPILYGWVIQAESGFLTI*AELHTV Trigger: TACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCC...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTTTAGGTGCTGGGAATaGAACCCAGGTTCTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCISSCFLTCLSSSPDFLFRCWE*NPGSLQ Trigger: TTGCAGAGAACCTGGGTTCAATTCCCAGCACCTAAA...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GCACTCTATTGCCACGCCGACTTTAAAACATGTAAGTaGACATGCGTGTCTGAGAGACAAGCACACACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALYCHADFKTCK*TCVSERQAHTA Trigger: GGCAGTGTGTGCTTGTCTCTCAGACACGCATGTTCACTTACATGTTTTAAAGTCGGCGTGGCAATAGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | TCTCAAACGCCCACACCTTATTCAGTGCTCATGGGATaGATTGGAGGCAGAATGAATTGTTGCCACTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQTPTPYSVLMG*IGGRMNCCHCA Trigger: GGCACAGTGGCAACAATTCATTCTGCCTCCAATTCATCCCATGAGCACTGAATAAGGTGTGGGCGTTTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | ACCCAAGCCCTTGGAGGAGCCCAGAAGATTGTGAGTTaGATCCCAGACATTGGAAGGTTGGAGATTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQALGGAQKIVS*IPDIGRLEIDF Trigger: AAAATCAATCTCCAACCTTCCAATGTCTGGGATCCAACTCACAATCTTCTGGGCTCCTCCAAGGGCTTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | GAAGTGGGGTATTCCTGTGACAACTTGACCATGTTTTaGGGAGGACTGTGGAAAGACTTTGGAACTTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: EVGYSCDNLTMF*GGLWKDFGTLG Trigger: GCCCAAAGTTCCAAAGTCTTTCCACAGTCCTCCCCAAAACATGGTCAAGTTGTCACAGGAATACCCCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | TTAAGAAGATCCTTTGGAACTGGAGTTACAGACAGTTaGAGCTGCCTGATGTGGGTGCTGGGAAGTAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRRSFGTGVTDS*SCLMWVLGSKP Trigger: AGGCTTACTTCCCAGCACCCACATCAGGCAGCTCCAACTGTCTGTAACTCCAGTTCCAAAGGATCTTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | AACCTTCAGCCAGGAGTTAAGAAGATCCTTTGGAACTaGAGTTACAGACAGTTGGAGCTGCCTGATGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: NLQPGVKKILWN*SYRQLELPDVG Trigger: ACCCACATCAGGCAGCTCCAACTGTCTGTAACTCCAGTTCCAAAGGATCTTCTTAACTCCTGGCTGAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTTACCCAACAGGCCAATaGCCCATTCTCTATGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LALKSQRSAYLCLSSAVIYPTGQ*PILYGW Trigger: CCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTATGCCTATGATCAAAGTACAACTAAGGTCTTCTTATGTTTTGGCATGTCTGGATGGCCCACCCCTTaGATTGGCTGTGGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: IYAYDQSTTKVFLCFGMSGWPTP*IGCGPQ Trigger: CTGTGGCCCACAGCCAATCAAAGGGGTGGGCCATCC...AGACATGCCAAAACATAAGAAGACCTTAGTTGTACTTTGATCATAGGCATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGACTAAGACACTAGGTCATGATCACTCACTCATGTTTGGTTCCAGAATACTTGGACTTGCTTGGTaGGGCCACAGTCCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLTKTLGHDHSLMFGSRILGLAW*GHSPLV Trigger: AACCAAAGGACTGTGGCCCAACCAAGCAAGTCCAAG...TATTCTGGAACCAAACATGAGTGAGTGATCATGACCTAGTGTCTTAGTCAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTTTGTACTGGCTAGTTTaGTGTCAACTTGACACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVLFPPHGSQGSNSGPQALYWLV*CQLDTA Trigger: AGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAA...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGTTTGTGTGTCAAGTaGACAAGGGGTCAATTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: LCISSCFLTCLSSSPDFLCLCVK*TRGQLY Trigger: GTACAATTGACCCCTTGTCAACTTGACACACAAACA...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CTGTTCCGAGGTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGCTGGAGTTATCACAGAGAAAGGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFRGVLASFVST*HSWSYHRERSF Trigger: GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACACCTCGGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CCCAAGGATCGAACTCAGGTCCTCAGGCTTAGTATATaGGCCTTAACATGTCATCTCACAAGTCCAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PKDRTQVLRLSI*ALTCHLTSPEE Trigger: CTCTTCTGGACTTGTGAGATGACATGTTAAGGCTCATATACTAAGCCTGAGGACCTGAGTTCGATCCTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AAGCTAGACCCAATGACTTTCTCTCTCTGCTGCCTTTaGATGCAGATGGAGAACTCTCAGCTTCCATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLDPMTFSLCCL*MQMENSQLPCL Trigger: CAGACATGGAAGCTGAGAGTTCTCCATCTGCATTCAAAGGCAGCAGAGAGAGAAAGTCATTGGGTCTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | TTTCCCATCAACCTAATCAGGGGCAAGCATGGATCTTaGCCTATATCCTGCTCCTGTACCTCCTTCTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FPINLIRGKHGS*PISCSCTSFSQ Trigger: TTGTGAGAAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | GTATGCCTGGTACCTTCAGAAGTCAGAAGAAGGCATTaGATCCCCTGGAACCAGAATTACAATGGTCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCLVPSEVRRRH*IPWNQNYNGHE Trigger: CTCATGACCATTGTAATTCTGGTTCCAGGGGATCCAATGCCTTCTTCTGACTTCTGAAGGTACCAGGCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | GAACAACTTTCAGGAGTTAGTTCTCTTTCCACCACATaGATCCCAAGGATCGAACTCAGGTCCTCAGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EQLSGVSSLSTT*IPRIELRSSGL Trigger: TAAGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAACTCCTGAAAGTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCTTGGGCCACAGTCCTTaGGTTTATTTTGAGTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCLGHSP*VYFELV Trigger: CACCAACTCAAAATAAACCAAAGGACTGTGGCCCAA...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTAAAGACTTTGGAACTTaGGGCTTGAAGATCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCISSCFLTCLSSSPDFLKDFGT*GLKIHS Trigger: TGAATGGATCTTCAAGCCCAAAGTTCCAAAGTCTTT...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GGTTGGGCCACAGTCCTTTGGTTTATTTTGAGTTGGTaGGTAGATAGCAGTATGGTGTTCACCACGCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GWATVLWFILSW*VDSSMVFTTLI Trigger: AATGAGCGTGGTGAACACCATACTGCTATCTACTCACCAACTCAAAATAAACCAAAGGACTGTGGCCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | CAGATGGAGAACTCTCAGCTTCCATGTCTGCCTGCTTaGTGTCATGCTTCACTCAATGAGGATAATGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: QMENSQLPCLPA*CHASLNEDNGL Trigger: TAATCCATTATCCTCATTGAGTGAAGCATGACAGCAAGCAGGCAGACATGGAAGCTGAGAGTTCTCCATCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | TCAGGCCAGTTTCCAGGAAATGGGCACGTCTTGTTTTaGAGAAGCTTTAAAAGTCAAAGCCCACAGTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SGQFPGNGHVLF*RSFKSQSPQCI Trigger: AATGCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAAACTGGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | TGTGATGGGCATGGTGTCTTCAAATGTACAAGTCTTTaGGGGGTTCTTGACCATCTTGGCAGAACTACATAC | + |
|
Preference number: 3 (lower is better) Translates to: CDGHGVFKCTSL*GVLDHLGRTTY Trigger: GTATGTAGTTCTGCCAAGATGGTCAAGAACCCCCCAAAGACTTGTACATTTGAAGACACCATGCCCATCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| 3UTR CCA 72 bp | TTTGCAAACCTTCAGCCAGGAGTTAAGAAGATCCTTTaGAACTGGAGTTACAGACAGTTGGAGCTGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FANLQPGVKKIL*NWSYRQLELPD Trigger: ATCAGGCAGCTCCAACTGTCTGTAACTCCAGTTCCAAAGGATCTTCTTAACTCCTGGCTGAAGGTTTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | GCATTTATTTCCCATCAACCTAATCAGGGGCAAGCATaGATCTTGACCTATATCCTGCTCCTGTACCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AFISHQPNQGQA*ILTYILLLYLL Trigger: AAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAATAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | TCATCAGTGCTTCCTCTGAGGTTCAAACATGACTGCTaGCCAGATTCCAAAGAGAAACTTCACTTTTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSVLPLRFKHDC*PDSKEKLHFWP Trigger: AGGCCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTGGGTTCTTGACCATCTaGGCAGAACTACATACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LALKSQRSAYLCLSSAVIGFLTI*AELHTV Trigger: TACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCC...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACTCTCTGGTCCAGTTCTaGTTCCAGAACACAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: FQEMGTSCFAEALKVKAHSLVQF*FQNTRN Trigger: GTTTCTTGTGTTCTGGAACAAGAACTGGACCAGAGA...GTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCGCACCCCAGATGGTTTaGTTTGATACCTGTGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCAPQMV*FDTCVN Trigger: ATTTACACAGGTATCAAACAAAACCATCTGGGGTGC...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTTGCTTTCTGACCTGCTaGAGTTCCAGTCCTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVCFLTC*SSSPDF Trigger: GAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCA...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTCTCTTTCCACCACATGGATCCCAAGGATCGAACTCAGGTCCTCAGGCTGCTTGGAAGATAATATaGAGAACAATGCAGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LVLFPPHGSQGSNSGPQAAWKII*RTMQKM Trigger: CATCTTCTGCATTGTTCTCAATATTATCTTCCAAGC...AGCCTGAGGACCTGAGTTCGATCCTTGGGATCCATGTGGTGGAAAGAGAACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCCTTGTGGGTAAGACTATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGATTTGGAACTTTGGGCTaGAAGATCCATTCATTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: RPLVGKTISGLVVLGSIRFGTLG*KIHSLL Trigger: TAACAATGAATGGATCTTCAAGCCCAAAGTTCCAAA...TCTTATAGAACCCAAGACTACCAGCCCAGAGATAGTCTTACCCACAAGGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCTCAACTTTGCATCTCTaGTATACTGGCATGAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCSTLHL*YTGMNV Trigger: GACGTTCATGCCAGTATACAAGAGATGCAAAGTTGA...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AAGATCAAAGAAAGCAAAACAACAGCCTCTAACTGGTaGGAGGACTACATTCCACGGGTGTTCTGGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: KIKESKTTASNW*EDYIPRVFWKS Trigger: GCTTTTCCAGAACACCCGTGGAATGTAGTCCTCTCACCAGTTAGAGGCTGTTGTTTTGCTTTCTTTGATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR TCA 72 bp | TCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGCTaGATAAACCCTTTCCTCCCTAACTTGCTTCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFGDEQQYGSVS*INPFLPNLLPG Trigger: ACCAGGAAGCAAGTTAGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATACTGCTGTTCATCACCAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | AAGGGGTCAATTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGCTGGAGTTATCACAGAGAAAGGAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KGSIVLASFVST*HSWSYHRERSF Trigger: GAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAATTGACCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | TCCTTTGGTGATGAACAGCAGTATGGAAGTGTAAGTTaGATAAACCCTTTCCTCCCCAACTTGCTTCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFGDEQQYGSVS*INPFLPNLLPG Trigger: ACCAGGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAACTTACACTTCCATACTGCTGTTCATCACCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | CCCTACCTTCCTAATTGCCAGAAAAGATGGAGGCTATaGAAAGATCCTATAAAGAGCAGAGACTCTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PYLPNCQKRWRL*KDPIKSRDSSG Trigger: ACCAGAAGAGTCTCTGCTCTTTATAGGATCTTTGCATAGCCTCCATCTTTTCTGGCAATTAGGAAGGTAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAATGGGCACGTCTTGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAGTGCGTCCAAGACAAAATCTaGAATGTGATGAGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GNGHVLFCRSFKSQSPQCVQDKI*NVMRTE Trigger: CTCTGTTCTCATCACATTCAAGATTTTGTCTTGGAC...GCACTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR GCA 72 bp | AATTCATCAGTGCTTCCTCTGAGGTTCAAACATGACTaGTGGCCAGATTCCAAAGAGAAACTTCACTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSSVLPLRFKHD*WPDSKEKLHFW Trigger: CCAAAAGTGAAGTTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGATGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR CCA 72 bp | AAGTTTAGTGTGTATGTGTATGCCATGGCACATGAGTaGAGGTCAGAGAACAACTTTCAGGAGTTAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KFSVYVYAMAHE*RSENNFQELVL Trigger: GAGAACTAACTCCTGAAAGTTGTTCTCTGACCTCCACTCATGTGCCATGGCATACACATACACACTAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTGGGTTCTTGACCATCTaGGCAGAACTACATACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVGFLTI*AELHTV Trigger: TACTGTATGTAGTTCTGCCAAGATGGTCAAGAACCC...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GCATTGGATCCCCTGGAACCAGAATTACAATGGTCATaGGCTGTAGCAGAATTTTTCCTGTTCAATCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALDPLEPELQWS*AVAEFFLFNHF Trigger: AAAGTGATTGAACAGGAAAAATTCTGCTACAGCTCATGACCATTGTAATTCTGGTTCCAGGGGATCCAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | TGCTTTTATAAAAGGTGTGTTTGTCTAATGGCCACCTaGGATGTAAAGGAAGGAAACTGGCACTTGGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: CFYKRCVCLMAT*DVKEGNWHLAL Trigger: TAATGCCAAGTGCCAGTTTCCTTCCTTTACATCTCAGGTGGCCATTAGACAAACACACCTTTTATAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR TCA 72 bp | TATTTTCTTGGTAGAATAATTCATCAGTGCTTCCTCTaGGGTTCAAACATGACTGCTGGCCAGATTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YFLGRIIHQCFL*GSNMTAGQIPK Trigger: CTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGATGAATTATTCTACCAAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
||
| 3UTR CCA 72 bp | CTGGCTGCTTGTTTTCCCAATTCTAGTTCTACAAGATaGTCCAAGAAGTTCCTATTGCTTGAAGAGATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LAACFPNSSSTR*SKKFLLLEEMN Trigger: ATTCATCTCTTCAAGCAATAGGAACTTCTTGGACCATCTTGTAGAACTAGAATTGGGAAAACAAGCAGCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | GCTGTTACCATGTGGAAATATAATATTTGGTCAAACTaGATCTGTTCCGAGGTGTACTGGCTAGTTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AVTMWKYNIWSN*ICSEVYWLVLC Trigger: ACACAAAACTAGCCAGTACACCTCGGAACAGATTCAGTTTGACCAAATATTATATTTCCACATGGTAACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR TCA 72 bp | CTTTGGCTTTATTCCCGTATAAGAGAGGAAGGGGAATaGGGCATAGATAGATGTATGATAAGATCAATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LWLYSRIREEGE*GIDRCMIRSIA Trigger: TGCTATTGATCTTATCATACATCTATCTATGCCTCATTCCCCTTCCTCTCTTATACGGGAATAAAGCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | CTCCAACCAGTAGATAAAATAGGAAAAGACTCTCTTTaGCAAAGACTCCATCCCTCATTAACATGGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LQPVDKIGKDSL*QRLHPSLTWEL Trigger: TAATTCCCATGTTAATGAGGGATGGAGTCTTTGCCAAAGAGAGTCTTTTCCTATTTTATCTACTGGTTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR CCA 72 bp | GGTAAGATTTCTGTTAAGGCTGAGATACATCTAGAATaGTGGTTATATTTGCCAAAGGTCTTGAAGTTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GKISVKAEIHLE*WLYLPKVLKLN Trigger: GTTCAACTTCAAGACCTTTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATCTTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR CCA 72 bp | CGGAATGTGGTGGTCAACTTTGCATCTCTTGTATACTaGCATGAACGTCAAACAAATACAAATTTAAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RNVVVNFASLVY*HERQTNTNLKR Trigger: CCTTTTTAAATTTGTATTTGTTTGACGTTCATGCCAGTATACAAGAGATGCAAAGTTGACCACCACATTCCG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CCA 72 bp | AAGATTTCTGTTAAGGCTGAGATACATCTAGAATGGTaGTTATATTTGCCAAAGGTCTTGAAGTTGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: KISVKAEIHLEW*LYLPKVLKLNF Trigger: AAAGTTCAACTTCAAGACCTTTGGCAAATATAACCACCATTCTAGATGTATCTCAGCCTTAACAGAAATCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| 3UTR CAA 72 bp | GGCCATGGAAGGCCATTGGTGAAGGTGCAGCCTCAGTaGCAATTGAAGGCCCAGGACGGAAGGGGTCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: GHGRPLVKVQPQ*QLKAQDGRGHA Trigger: TGCGTGACCCCTTCCGTCCTGGGCCTTCAATTGCAACTGAGGCTGCACCTTCACCAATGGCCTTCCATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 72 bp | CTCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTCTaGGGTTCTATAAGAGAGCAGGCTAAGCAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVGGTISGLVV*GSIREQAKQAR Trigger: CCTGGCTTGCTTAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 72 bp | GTGGCCTTGGAGGAGGTGTGTCACTGGGGGTGGGCTTaGAGGTTTCAAAAGCCCAAGCTAGACCCAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: VALEEVCHWGWA*RFQKPKLDPMT Trigger: AGTCATTGGGTCTAGCTTGGGCTTTTGAAACCTCAAAGCCCACCCCCAGTGACACACCTCCTCCAAGGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR CCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTCCAATGTGGAGGTCGTaGGGCCCCAATAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCISSCFLTCLSSSPDFLPMWRS*GPNSLC Trigger: GCAAAGGCTATTGGGGCCCCACGACCTCCACATTGG...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR CCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGCCAATGTGGAGGTCGTaGGGCCCCAATAGCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTQQANCPFSMAGSFRLPMWRS*GPNSLC Trigger: GCAAAGGCTATTGGGGCCCCACGACCTCCACATTGG...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000151258.8 |
||
| CDS-3UTR CCA 90 bp | AATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCACACCAGTCCAATGTaGAGGTCGTGGGGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTQQANCPFSMAGSFRLSHTSPM*RSWGPN Trigger: ATTGGGGCCCCACGACCTCCACATTGGACTGGTGTG...ACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000151258.8 |
||
| 3UTR CAA 72 bp | GAGATAGCCAAGGTTGTACTCCTGCTGCAGCGGGTCTaGGTAATATGTAAGGGTCACCCAGGTGGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIAKVVLLLQRV*VICKGHPGGTG Trigger: ACCAGTACCACCTGGGTGACCCTTACATATTACCAAGACCCGCTGCAGCAGGAGTACAACCTTGGCTATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 72 bp | CCCCTTGTGGGTAAGACTATCTCTGGGCTGGTAGTCTaGGGTTCTATAAGAGAGCAGGCTAAGCAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVGKTISGLVV*GSIREQAKQAR Trigger: CCTGGCTTGCTTAGCCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATAGTCTTACCCACAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 72 bp | TTCCATCCCCTTCTACTTTCACTTTCCCTGGAGCACTaGGGGATGATGGGCAAGCTCCCAACCAGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHPLLLSLSLEH*GMMGKLPTRKH Trigger: GTGCTTTCTGGTTGGGAGCTTGCCCATCATCCCCAAGTGCTCCAGGGAAAGTGAAAGTAGAAGGGGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR TCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCCCATTCCTACCACTGTaGGTGCTAAGTAAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSPFLPL*VLSKQQ Trigger: TTGCTGCTTACTTAGCACTCACAGTGGTAGGAATGG...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR GCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCAGGTTCAAACATGACTaGTGGCCAGATTCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSRFKHD*WPDSKE Trigger: CTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCT...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| 3UTR CAA 72 bp | GAGATAAAGCCAGGAGCTAAATACCCAACAGGCCAATaGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EIKPGAKYPTGQ*PILYGWVIQAE Trigger: CTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGCCATTCCTACCACTGTaGGTGCTAAGTAAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTQQANCPFSMAGSFRLPFLPL*VLSKQQ Trigger: TTGCTGCTTACTTAGCACTCACAGTGGTAGGAATGG...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCATGGCCTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTTCAAACATGACTGCTaGCCAGATTCCAAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPWPLYQLLLSDLLEFQSFKHDC*PDSKEK Trigger: TTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAA...GGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAGGCCATGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR TCA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCAATATGCCACCATGCATaGAACTGTGTTGTAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: YPTGQLPILYGWVIQAESICHHA*NCVVTP Trigger: AGGTGTTACAACACAGTTTCATGCATGGTGGCATAT...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
||
| CDS-3UTR CCA 90 bp | GACTCTTTTCAGGGCCATTGCTGTTTTGATTGTGAAGATTCTGTAGTTCTGGTTCACACCAGTCCAATGTaGAGGTCGTGGGGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DSFQGHCCFDCEDSVVLVHTSPM*RSWGPN Trigger: ATTGGGGCCCCACGACCTCCACATTGGACTGGTGTG...AACCAGAACTACAGAATCTTCACAATCAAAACAGCAATGGCCCTGAAAAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
||
| CDS-3UTR TCA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCACTGTCTCTAATGCCTTaGATTGCACCAAAAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPTGQLPILYGWVIQAESLSLMP*IAPKIG Trigger: TCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAG...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS-3UTR TCA 90 bp | CTCTGTATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTATATGCCACCATGCATaGAACTGTGTTGTAACACCT | + |
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Preference number: 4 (lower is better) Translates to: LCISSCFLTCLSSSPDFLICHHA*NCVVTP Trigger: AGGTGTTACAACACAGTTTCATGCATGGTGGCATAT...AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGGAGCTGATACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | CAAGCTAGACCCAATGACTTTCTCTCTCTGCTGCCTTaGAATGCAGATGGAGAACTCTCAGCTTCCATGTCT | + |
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Preference number: 4 (lower is better) Translates to: QARPNDFLSLLP*NADGELSASMS Trigger: AGACATGGAAGCTGAGAGTTCTCCATCTGCATTCAAAGGCAGCAGAGAGAGAAAGTCATTGGGTCTAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | ATTTCCCATCAACCTAATCAGGGGCAAGCATGGATCTaGACCTATATCCTGCTCCTGTACCTCCTTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: ISHQPNQGQAWI*TYILLLYLLLT Trigger: TGTGAGAAGGAGGTACAGGAGCAGGATATAGGTCAAGATCCATGCTTGCCCCTGATTAGGTTGATGGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | ATGGACTCAGGCCAGTTTCCAGGAAATGGGCACGTCTaGTTTTGCAGAAGCTTTAAAAGTCAAAGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: MDSGQFPGNGHV*FCRSFKSQSPQ Trigger: CTGTGGGCTTTGACTTTTAAAGCTTCTGCAAAACAAGACGTGCCCATTTCCTGGAAACTGGCCTGAGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| CDS-3UTR TCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGCTGTCTCTAATGCCTTaGATTGCACCAAAAATTGGA | + |
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Preference number: 4 (lower is better) Translates to: LNTQQANCPFSMAGSFRLLSLMP*IAPKIG Trigger: TCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAG...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS-3UTR TCA 90 bp | AATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCTGTCTCTAATGCCTTaGATTGCACCAAAAATTGGA | + |
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Preference number: 4 (lower is better) Translates to: NTQQANCPFSMAGSFRLSLSLMP*IAPKIG Trigger: TCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAG...ACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS-3UTR GCA 90 bp | CTAAATACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGCTCATCCAACAGCTaGATTTCATATTTCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: LNTQQANCPFSMAGSFRLSSSNS*ISYFRV Trigger: GACTCTGAAATATGAAATGCAGCTGTTGGATGAGCT...CAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGGCCACAGAGTCCAAGACAAAATCTTGAATGTGATGAGAACAGAGCCTTCAAACATGACTGCTaGCCAGATTCCAAAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GCGPQSPRQNLECDENRAFKHDC*PDSKEK Trigger: TTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAA...GGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 72 bp | GTTGGTAAGCTTTTTCAGGGACTTGGACTTGCTTGGTaGGGCCACAGTCCTTTGGTTTATTTTGAGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VGKLFQGLGLAW*GHSPLVYFELV Trigger: CACCAACTCAAAATAAACCAAAGGACTGTGGCCCAACCAAGCAAGTCCAAGTCCCTGAAAAAGCTTACCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| CDS-3UTR GCA 90 bp | TACCCAACAGGCCAATTGCCCATTCTCTATGGCTGGGTCATTCAGGCTGAGTCATCTAATGCCTTGAATTaGACCAAAAATTGGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: YPTGQLPILYGWVIQAESSNALN*TKNWRY Trigger: ATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGA...TGACTCAGCCTGAATGACCCAGCCATAGAGAATGGGCAATTGGCCTGTTGGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTAGGTTCAAACATGACTaGTGGCCAGATTCCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LALKSQRSAYLCLSSAVIRFKHD*WPDSKE Trigger: CTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCT...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCCTTGTGGGTAAGACTATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGATCTAATGCCTTGAATTaGACCAAAAATTGGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: RPLVGKTISGLVVLGSIRSNALN*TKNWRY Trigger: ATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGA...TCTTATAGAACCCAAGACTACCAGCCCAGAGATAGTCTTACCCACAAGGGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| CDS-3UTR CCA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTGAGAAACTTCACTTTTaGCCTGTACCTCAGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LALKSQRSAYLCLSSAVIEKLHF*PVPQVK Trigger: CTTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTC...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 72 bp | GTGATGTGTTTGTGTGTCAAGTTGACAAGGGGTCAATaGTACTGGCTAGTTTTGTGTCAACTTGACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VMCLCVKLTRGQ*YWLVLCQLDTA Trigger: AGCTGTGTCAAGTTGACACAAAACTAGCCAGTACAATTGACCCCTTGTCAACTTGACACACAAACACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | ATGTTTTGGGGAGGACTGTGGAAAGACTTTGGAACTTaGGGCTTGAAGATCCATTCATTGTTAAGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: MFWGGLWKDFGT*GLKIHSLLRAL Trigger: CAGAGCTCTTAACAATGAATGGATCTTCAAGCCCAAAGTTCCAAAGTCTTTCCACAGTCCTCCCCAAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTTCCTCTGAGGTTCAAACATGACTGCTGGCCAGATTCCAAAGAGAAAGTACAGACAAGACTCTaGAGATACACATGTAACAAT | + |
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Preference number: 4 (lower is better) Translates to: SVLPLRFKHDCWPDSKEKVQTRL*RYTCNN Trigger: ATTGTTACATGTGTATCTCCAGAGTCTTGTCTGTAC...TTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
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| CDS-3UTR GCA 90 bp | ACCCTGACTAAGACACTAGGTCATGATCACTCACTCATGTTTGGTTCCAGAATAAGCTCATCCAACAGCTaGATTTCATATTTCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TLTKTLGHDHSLMFGSRISSSNS*ISYFRV Trigger: GACTCTGAAATATGAAATGCAGCTGTTGGATGAGCT...TATTCTGGAACCAAACATGAGTGAGTGATCATGACCTAGTGTCTTAGTCAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| CDS-3UTR GCA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTTCTAATGCCTTGAATTaGACCAAAAATTGGAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LALKSQRSAYLCLSSAVISNALN*TKNWRY Trigger: ATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGA...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 72 bp | ATAGCCTTATGCTTTTCATGTTCTCTTTTGGCACTGTaGGTACTCAATGGTTACAATCCCATACTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IALCFSCSLLAL*VLNGYNPILPS Trigger: AGAAGGAAGTATGGGATTGTAACCATTGAGTACCAACAGTGCCAAAAGAGAACATGAAAAGCATAAGGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 72 bp | TCAGTCCTTATAGCCTTATGCTTTTCATGTTCTCTTTaGGCACTGTTGGTACTCAATGGTTACAATCCCATA | + |
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Preference number: 4 (lower is better) Translates to: SVLIALCFSCSL*ALLVLNGYNPI Trigger: TATGGGATTGTAACCATTGAGTACCAACAGTGCCAAAAGAGAACATGAAAAGCATAAGGCTATAAGGACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| 3UTR CAA 72 bp | TGTAAAGACGGTGGGACTTTTAAAGTTATTTGGATCTaGGGGATGAATAAGAATGTAAGGGTTGAGGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: CKDGGTFKVIWI*GMNKNVRVEAY Trigger: GTAAGCCTCAACCCTTACATTCTTATTCATCCCCAAGATCCAAATAACTTTAAAAGTCCCACCGTCTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | ACTCATGTTTGGTTCCAGAATAAACTCTTAGTCCCTTaGATCTGTATTGAGTTGTGTTGTGTGTATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: THVWFQNKLLVP*ICIELCCVYAS Trigger: AGAAGCATACACACAACACAACTCAATACAGATCAAAGGGACTAAGAGTTTATTCTGGAACCAAACATGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033020.14 |
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| 3UTR CAA 72 bp | CCTATGATCAAAGTACAACTAAGGTCTTCTTATGTTTaGGCATGTCTTGCTTTTATAAAAGGTGTGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PMIKVQLRSSYV*ACLAFIKGVFV Trigger: GACAAACACACCTTTTATAAAAGCAAGACATGCCAAAACATAAGAAGACCTTAGTTGTACTTTGATCATAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS CCA 90 bp | CGACGAACAAGGTCACCACATAGTTCTCCTCACACCAGTCCAATGTaGAGGTCGTGGGGCCCCAATAGCCTTTGCGGTCCACAGCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: RRTRSPHSSPHTSPM*RSWGPNSLCGPQPE Trigger: CTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCACATTGGACTGGTGTGAGGAGAACTATGTGGTGACCTTGTTCGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS-3UTR CAA 90 bp | GGCTGTGGGCCACAGAGTCCAAGACAAAATCTTGAATGTGATGAGAACAGAGCCAGAGAAACTTCACTTTaGGCCTGTACCTCAGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: GCGPQSPRQNLECDENRARETSL*ACTSGK Trigger: TTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCT...GGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS-3UTR CAA 90 bp | GGCTGTGGGCCACAGAGTCCAAGACAAAATCTTGAATGTGATGAGAACAGAGCCATTGAGCTCTTTGTCTaGAAACACTCAAACATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GCGPQSPRQNLECDENRAIELFV*KHSNMQ Trigger: CTGCATGTTTGAGTGTTTCAAGACAAAGAGCTCAAT...GGCTCTGTTCTCATCACATTCAAGATTTTGTCTTGGACTCTGTGGCCCACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS-3UTR CAA 90 bp | TCAGTGCTTCCTCTGAGGTTCAAACATGACTGCTGGCCAGATTCCAAAGAGAAAATTGAGCTCTTTGTCTaGAAACACTCAAACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLRFKHDCWPDSKEKIELFV*KHSNMQ Trigger: CTGCATGTTTGAGTGTTTCAAGACAAAGAGCTCAAT...TTTCTCTTTGGAATCTGGCCAGCAGTCATGTTTGAACCTCAGAGGAAGCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151258.8 |
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| CDS-3UTR CAA 90 bp | CTGGCCTTAAAATCACAGAGATCTGCCTATCTCTGCCTTTCAAGTGCTGTGATTAGAGAAACTTCACTTTaGGCCTGTACCTCAGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LALKSQRSAYLCLSSAVIRETSL*ACTSGK Trigger: TTTACCTGAGGTACAGGCCAAAAGTGAAGTTTCTCT...AATCACAGCACTTGAAAGGCAGAGATAGGCAGATCTCTGTGATTTTAAGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS GCA 90 bp | AGCAGCAATGTACCGCTTCTCCAGTCTGTCTCTAATGCCTTGAATTaGACCAAAAATTGGAGGTATGATCATAATCAGGTTACTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSNVPLLQSVSNALN*TKNWRYDHNQVTHC Trigger: ACAGTGAGTAACCTGATTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS CCA 90 bp | CCGCTTCTCCAGTCTGTCTCTAATGCCTTGAATTGCACCAAAAATTaGAGGTATGATCATAATCAGGTTACTCACTGTATTCCAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLQSVSNALNCTKN*RYDHNQVTHCIPEL Trigger: GAGTTCTGGAATACAGTGAGTAACCTGATTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS-3UTR CAA 90 bp | ATCTATGCCTATGATCAAAGTACAACTAAGGTCTTCTTATGTTTTGGCATGTCTATTGAGCTCTTTGTCTaGAAACACTCAAACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IYAYDQSTTKVFLCFGMSIELFV*KHSNMQ Trigger: CTGCATGTTTGAGTGTTTCAAGACAAAGAGCTCAAT...AGACATGCCAAAACATAAGAAGACCTTAGTTGTACTTTGATCATAGGCATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 |
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| CDS CCA 72 bp | CATAGTTCTCCTCACACCAGTCCAATGTGGAGGTCGTaGGGCCCCAATAGCCTTTGCGGTCCACAGCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSSPHTSPMWRS*GPNSLCGPQPE Trigger: CTCCGGCTGTGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCACATTGGACTGGTGTGAGGAGAACTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS CCA 72 bp | AGGTCACCACATAGTTCTCCTCACACCAGTCCAATGTaGAGGTCGTGGGGCCCCAATAGCCTTTGCGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPHSSPHTSPM*RSWGPNSLCGP Trigger: TGGACCGCAAAGGCTATTGGGGCCCCACGACCTCCACATTGGACTGGTGTGAGGAGAACTATGTGGTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS TCA 72 bp | GCAATGTACCGCTTCTCCAGTCTGTCTCTAATGCCTTaGATTGCACCAAAAATTGGAGGTATGATCATAATC | + |
|
Preference number: 6 (lower is better) Translates to: AMYRFSSLSLMP*IAPKIGGMIII Trigger: GATTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTGGAGAAGCGGTACATTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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| CDS CCA 72 bp | ACATGCAGTATACAAATATGCAGCAGCTGTAAATCATaGGGAGCTCATCCAACAGCTGCATTTCATATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TCSIQICSSCKS*GAHPTAAFHIS Trigger: TGAAATATGAAATGCAGCTGTTGGATGAGCTCCCCATGATTTACAGCTGCTGCATATTTGTATACTGCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000120520.8 ENSMUST00000151258.8 |
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| CDS CCA 72 bp | CAGTCTGTCTCTAATGCCTTGAATTGCACCAAAAATTaGAGGTATGATCATAATCAGGTTACTCACTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: QSVSNALNCTKN*RYDHNQVTHCI Trigger: AATACAGTGAGTAACCTGATTATGATCATACCTCCAATTTTTGGTGCAATTCAAGGCATTAGAGACAGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033020.14 ENSMUST00000137899.2 ENSMUST00000151258.8 |
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