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Pregenerated sensors for ACBD7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026644

Ensembl transcript IDs: ENSMUST00000115089.2, ENSMUST00000228935.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TTTGGGAAGGAACTTTTTAATGTCATCTTGCTCAAGTaGGTAAAATCAGGTAACCATGCTGACAGTCCTAAG +
Preference number: 3 (lower is better)
Translates to: FGKELFNVILLK*VKSGNHADSPK
Trigger: CTTAGGACTGTCAGCATGGTTACCTGATTTTACTCACTTGAGCAAGATGACATTAAAAAGTTCCTTCCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR TCA 90 bp GAATTATTGATGCATATGAAGGCTTCCAAAGGAGATCTGATTTCTCCGTCACCTGCCCGTAGAGTTCCTTaGGTTCTTCATCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: ELLMHMKASKGDLISPSPARRVP*VLHLPV
Trigger: GACCGGAAGATGAAGAACTCAAGGAACTCTACGGGC...AGGTGACGGAGAAATCAGATCTCCTTTGGAAGCCTTCATATGCATCAATAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR TCA 90 bp AGCGCATGTGCATACTACAAAACAATATTTGGGAAGGAACTTTTTAATGTCATCGCCCGTAGAGTTCCTTaGGTTCTTCATCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SACAYYKTIFGKELFNVIARRVP*VLHLPV
Trigger: GACCGGAAGATGAAGAACTCAAGGAACTCTACGGGC...GATGACATTAAAAAGTTCCTTCCCAAATATTGTTTTGTAGTATGCACATGCGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR CCA 90 bp GAATTATTGATGCATATGAAGGCTTCCAAAGGAGATCTGATTTCTCCGTCACCTTCCAAGCTTCCCATTTaGCCTTACCCTTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: ELLMHMKASKGDLISPSPSKLPI*PYPLDL
Trigger: TAGATCTAAAGGGTAAGGCCAAATGGGAAGCTTGGA...AGGTGACGGAGAAATCAGATCTCCTTTGGAAGCCTTCATATGCATCAATAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR CCA 90 bp TTTAGAGAATTATTGATGCATATGAAGGCTTCCAAAGGAGATCTGATTTCTCCGTTCGACAACCCTTTTTaGAGGTTCCAAGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FRELLMHMKASKGDLISPFDNPF*RFQASH
Trigger: ATGGGAAGCTTGGAACCTCCAAAAAGGGTTGTCGAA...CGGAGAAATCAGATCTCCTTTGGAAGCCTTCATATGCATCAATAATTCTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR CCA 90 bp TTTAGAGAATTATTGATGCATATGAAGGCTTCCAAAGGAGATCTGATTTCTCCGTCCAAGCTTCCCATTTaGCCTTACCCTTTAGATCTA +
Preference number: 4 (lower is better)
Translates to: FRELLMHMKASKGDLISPSKLPI*PYPLDL
Trigger: TAGATCTAAAGGGTAAGGCCAAATGGGAAGCTTGGA...CGGAGAAATCAGATCTCCTTTGGAAGCCTTCATATGCATCAATAATTCTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS-3UTR CCA 90 bp AGCGCATGTGCATACTACAAAACAATATTTGGGAAGGAACTTTTTAATGTCATCTTCGACAACCCTTTTTaGAGGTTCCAAGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SACAYYKTIFGKELFNVIFDNPF*RFQASH
Trigger: ATGGGAAGCTTGGAACCTCCAAAAAGGGTTGTCGAA...GATGACATTAAAAAGTTCCTTCCCAAATATTGTTTTGTAGTATGCACATGCGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000115089.2
ENSMUST00000228935.2
CDS TCA 72 bp TGCTGGGCATGCACCAATGTTGATGTCTCCAATGACTaGCTGCTTGTAGAGCCCGTAGAGTTCCTTGAGTTC +
Preference number: 6 (lower is better)
Translates to: CWACTNVDVSND*LLVEPVEFLEF
Trigger: GAACTCAAGGAACTCTACGGGCTCTACAAGCAGTCAGTCATTGGAGACATCAACATTGGTGCATGCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228935.2
CDS TCA 72 bp CATTGCTGGGCATGCAATGTTGATGTCTCCAATGACTaGCTGCTTGTAGAGCCCGTAGAGTTCCTTGAGTTC +
Preference number: 6 (lower is better)
Translates to: HCWACNVDVSND*LLVEPVEFLEF
Trigger: GAACTCAAGGAACTCTACGGGCTCTACAAGCAGTCAGTCATTGGAGACATCAACATTGCATGCCCAGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115089.2
CDS CAA 90 bp GCATCTTCCTTCGACAACCCTTTTTGGAGGTTCCAAGCTTCCCATTaGGCCTTACCCTTTAGATCTAACATTGCTGGGCATGCACCAATG +
Preference number: 6 (lower is better)
Translates to: ASSFDNPFWRFQASH*ALPFRSNIAGHAPM
Trigger: CATTGGTGCATGCCCAGCAATGTTAGATCTAAAGGGTAAGGCCAAATGGGAAGCTTGGAACCTCCAAAAAGGGTTGTCGAAGGAAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000228935.2
CDS CAA 90 bp GCATCTTCCTTCGACAACCCTTTTTGGAGGTTCCAAGCTTCCCATTaGGCCTTACCCTTTAGATCTAACATTGCTGGGCATGCAATGTTG +
Preference number: 6 (lower is better)
Translates to: ASSFDNPFWRFQASH*ALPFRSNIAGHAML
Trigger: CAACATTGCATGCCCAGCAATGTTAGATCTAAAGGGTAAGGCCAAATGGGAAGCTTGGAACCTCCAAAAAGGGTTGTCGAAGGAAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115089.2