Pregenerated sensors for ACBD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033701Ensembl transcript IDs: ENSMUST00000035560.9, ENSMUST00000080138.13, ENSMUST00000097529.5, ENSMUST00000192730.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCAGAATTCCGAGGACGATGCTTTGGCTGCTCTCCTTCTACCTaGCAAGCAGAGGAGACAGCAGTGTTGGTCAGCTGGCTGACTCCT | + |
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Preference number: 1 (lower is better) Translates to: QAEFRGRCFGCSPST*QAEETAVLVSWLTP Trigger: AGGAGTCAGCCAGCTGACCAACACTGCTGTCTCCTCTGCTTGTCAGGTAGAAGGAGAGCAGCCAAAGCATCGTCCTCGGAATTCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 90 bp | CCCAACCCACCCACTTCCATTCTTGGTCCTGGCATTTCCCTATACTaGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTG | + |
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Preference number: 1 (lower is better) Translates to: PNPPTSILGPGISLY*GIEPSQDQGPLLPL Trigger: CAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGACCAAGAATGGAAGTGGGTGGGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 90 bp | CATTTAAAACCAGACAGAGCAGGCAGAATTCCGAGGACGATGCTTTaGCTGCTCTCCTTCTACCTGACAAGCAGAGGAGACAGCAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: HLKPDRAGRIPRTML*LLSFYLTSRGDSSV Trigger: AACACTGCTGTCTCCTCTGCTTGTCAGGTAGAAGGAGAGCAGCCAAAGCATCGTCCTCGGAATTCTGCCTGCTCTGTCTGGTTTTAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 90 bp | AGGTTGAACGAAGGTAGGCTATACAGATTAGCTGTGAAATGCTACTaGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAACTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RLNEGRLYRLAVKCY*VICFLLCWDFTELS Trigger: GGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGCCTACCTTCGTTCAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
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| 3UTR GCA 90 bp | GTGGTAAAGGAACAAAGACCAGAGAATTACCCCCACATTTCAGTATaGACCAATGTGTGTATTTCCACAGGTAGGTCCTTAAGCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: VVKEQRPENYPHISV*TNVCISTGRSLSND Trigger: ATCATTGCTTAAGGACCTACCTGTGGAAATACACACATTGGTGCATACTGAAATGTGGGGGTAATTCTCTGGTCTTTGTTCCTTTACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 90 bp | AACAGCCATCTTACCTACCTATACAGATTAGCTGTGAAATGCTACTaGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAACTTTCC | + |
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Preference number: 1 (lower is better) Translates to: NSHLTYLYRLAVKCY*VICFLLCWDFTELS Trigger: GGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAGATGGCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR GCA 90 bp | TTGTCCTGGCACTGGCACATGAACACTAACTCTACAAGACTATTGTaGAATGACTACAGGTTAAAGAAACCTATGAAATCATCCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LSWHWHMNTNSTRLL*NDYRLKKPMKSSWK Trigger: TTTCCAGGATGATTTCATAGGTTTCTTTAACCTGTAGTCATTGCACAATAGTCTTGTAGAGTTAGTGTTCATGTGCCAGTGCCAGGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 90 bp | CGATTTAGTCCGTTTCTGATGGTAATTCATGATTTTAGACTTGTCTaGATAAGCAGAACACGAATTCTTAACATCTGTGCGGAAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: RFSPFLMVIHDFRLV*ISRTRILNICAEGK Trigger: CTTTCCTTCCGCACAGATGTTAAGAATTCGTGTTCTGCTTATCCAGACAAGTCTAAAATCATGAATTACCATCAGAAACGGACTAAATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 90 bp | GGGAATGAAATTAACCATGACTCAGTGTTCTCTGACATTTATGGATaGAGTCTTCATAGAAGACCCAGGAAAATGATCTACAGATTACTA | + |
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Preference number: 1 (lower is better) Translates to: GNEINHDSVFSDIYG*SLHRRPRKMIYRLL Trigger: TAGTAATCTGTAGATCATTTTCCTGGGTCTTCTATGAAGACTTCATCCATAAATGTCAGAGAACACTGAGTCATGGTTAATTTCATTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 90 bp | TCTCTGACATTTATGGATGAAGTCTTCATAGAAGACCCAGGAAAATaGTCTACAGATTACTATGTGATAGTACGGTTTTTGGAAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: SLTFMDEVFIEDPGK*STDYYVIVRFLEIQ Trigger: CTGAATTTCCAAAAACCGTACTATCACATAGTAATCTGTAGATCATTTTCCTGGGTCTTCTATGAAGACTTCATCCATAAATGTCAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CAA 90 bp | ACATTTAAAACCAGACAGAGCAGGCAGAATTCCGAGGACGATGCTTaGGCTGCTCTCCTTCTACCTGACAAGCAGAGGAGACAGCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFKTRQSRQNSEDDA*AALLLPDKQRRQQC Trigger: ACACTGCTGTCTCCTCTGCTTGTCAGGTAGAAGGAGAGCAGCCAAAGCATCGTCCTCGGAATTCTGCCTGCTCTGTCTGGTTTTAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CAA 90 bp | CTGACAAGCAGAGGAGACAGCAGTGTTGGTCAGCTGGCTGACTCCTaGCTCCTCAGTATTAGAGAGGTTATTAACGATTTAGTCCGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LTSRGDSSVGQLADS*LLSIREVINDLVRF Trigger: GAAACGGACTAAATCGTTAATAACCTCTCTAATACTGAGGAGCAAGGAGTCAGCCAGCTGACCAACACTGCTGTCTCCTCTGCTTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTCAGGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGAAGAGAAAGCCTTGCTaGCAAAGGGAGTCCACCATC | + |
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Preference number: 2 (lower is better) Translates to: ASGRQINFIQVCIVWEKGKRKPC*QRESTI Trigger: GATGGTGGACTCCCTTTGTCAGCAAGGCTTTCTCTT...CCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCCTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR-3UTR CCA 90 bp | TGTATAGTTTGGGAGAAGGGGGTAGGAATATCCAGGGTGGACAAAGGTCATTGGGACCAGGTTTCTTATTaGGAGAAAGGGAGTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: CIVWEKGVGISRVDKGHWDQVSY*EKGSWT Trigger: GGTCCAACTCCCTTTCTCCCAATAAGAAACCTGGTC...CCAATGACCTTTGTCCACCCTGGATATTCCTACCCCCTTCTCCCAAACTATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGATCTCAGGTGCTTGCTaGCCAGGTTTCTTATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RETDQLYSGLYSLGEGGRISGAC*PGFLLG Trigger: TCCCAATAAGAAACCTGGTCAGCAAGCACCTGAGAT...CCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGACCGGAAGTCCTAGTCTaGCAAACTGTGCTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SCEMLLGHLLSTMLGLHRPEVLV*QTVLLQ Trigger: CTGAAGAAGCACAGTTTGGCAGACTAGGACTTCCGG...TCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGATGGGAGAAAGGGAGTTaGACCTGTAATTTCCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRQINFIQVCIVWEKGVGWEKGS*TCNFPK Trigger: CTTAGGGAAATTACAGGTCCAACTCCCTTTCTCCCA...TCCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR CAA 90 bp | CTAATTGTCACTGTAGTGCTGATGGGCACACTTTGCTTCTGTATTTaGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LIVTVVLMGTLCFCI*RKRERERERERERE Trigger: CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCAAAATACAGAAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGAATAGTCCACCATCTGGCATaGAGCTTAAGGATATCCGGT | + |
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Preference number: 2 (lower is better) Translates to: RQINFIQVCIVWEKGVGIVHHLA*SLRISG Trigger: ACCGGATATCCTTAAGCTCCATGCCAGATGGTGGAC...TATTCCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAGTGATAAATTTCAAAGCATGCTAGGCAGAATTGGATTATATTATGCACCGGAAGTCCTAGTCTaGCAAACTGTGCTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSSDKFQSMLGRIGLYYAPEVLV*QTVLLQ Trigger: CTGAAGAAGCACAGTTTGGCAGACTAGGACTTCCGG...TGCATAATATAATCCAATTCTGCCTAGCATGCTTTGAAATTTATCACTGCTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTAACAAAAACTGTAAGCAGTGGGCTGCACTATGTAAGGTACTTCCCAGTATTTGCTTTCTACTATaGTGGGACTTCACAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: QANKNCKQWAALCKVLPSICFLL*WDFTEL Trigger: AAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAAT...ACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTAACAAAAACTGTAAGCAGTGGGCTGCACTATGTAAGGTACTTCCCAGTAGATTAGCTGTGAAATaGTACTGGGTCATTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QANKNCKQWAALCKVLPSRLAVK*YWVICF Trigger: AAAGCAAATGACCCAGTAGCATTTCACAGCTAATCT...ACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTCCGCCTTCAGTCTCTAGTGTTATTTACACACACACACACACACACACTATTAGTCTTGGTGAATaGTTTGTTTTTGCATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KAPPSVSSVIYTHTHTHTISLGE*FVFASQ Trigger: CTGAGATGCAAAAACAAACCATTCACCAAGACTAAT...AGTGTGTGTGTGTGTGTGTGTGTAAATAACACTAGAGACTGAAGGCGGAGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CAA 90 bp | TCTTACCTACCTATACAGATTAGCTGTGAAATGCTACTGGGTCATTaGCTTTCTACTATGCTGGGACTTCACAGAACTTTCCTAATTGTC | + |
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Preference number: 2 (lower is better) Translates to: SYLPIQISCEMLLGH*LSTMLGLHRTFLIV Trigger: GACAATTAGGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAGTGATAAATTTCAAAGCATGCTAGGCAGAATTGGATTATATTATGCACTCCCCCACAATGTATaGATGGAGAATGAGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HSSDKFQSMLGRIGLYYALPHNV*MENELL Trigger: CAGCAACTCATTCTCCATGCATACATTGTGGGGGAG...TGCATAATATAATCCAATTCTGCCTAGCATGCTTTGAAATTTATCACTGCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CAA 90 bp | TCACAGAACTTTCCTAATTGTCACTGTAGTGCTGATGGGCACACTTaGCTTCAAAGATGGGCGGTAAAAGAAGTATTATTTTTGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SQNFPNCHCSADGHT*LQRWAVKEVLFLQF Trigger: AAACTGCAAAAATAATACTTCTTTTACCGCCCATCTTTGAAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGGAAAGTTCTGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTACTATGCTGGGACTTCACAGAACTTTCCTAATTGTCACTGTAGTGCTGATAATGCATACCAAAGATaGGCGGTAAAAGAAGTATTA | + |
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Preference number: 2 (lower is better) Translates to: FYYAGTSQNFPNCHCSADNAYQR*AVKEVL Trigger: TAATACTTCTTTTACCGCCCATCTTTGGTATGCATT...ATCAGCACTACAGTGACAATTAGGAAAGTTCTGTGAAGTCCCAGCATAGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | CCCACTTCCATTCTTGGTCCTGGCATTTCCCTATACTaGGGCATAGAACCTTCACAGGACCAAGGGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PTSILGPGISLY*GIEPSQDQGPL Trigger: GAGAGGCCCTTGGTCCTGTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGACCAAGAATGGAAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | CCTGTTCCCCAACCCACCCACTTCCATTCTTGGTCCTaGCATTTCCCTATACTGGGGCATAGAACCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: PVPQPTHFHSWS*HFPILGHRTFT Trigger: TGTGAAGGTTCTATGCCCCAGTATAGGGAAATGCCAGGACCAAGAATGGAAGTGGGTGGGTTGGGGAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 72 bp | CAACCCCAGACTCCCCCACAATGTATGCATGGAGAATaGGTTGCTGAGACGTCGAAATCCCAGTTCCTCGAA | + |
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Preference number: 3 (lower is better) Translates to: QPQTPPQCMHGE*VAETSKSQFLE Trigger: TTCGAGGAACTGGGATTTCGACGTCTCAGCAACTCATTCTCCATGCATACATTGTGGGGGAGTCTGGGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 72 bp | AAGGGAGTTGGACCTGTAATTTCCCTAAGGGCTACATaGCATTCCTCAGGTAGTGGGTGTAGGTTCCGGGAT | + |
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Preference number: 3 (lower is better) Translates to: KGVGPVISLRAT*HSSGSGCRFRD Trigger: ATCCCGGAACCTACACCCACTACCTGAGGAATGTCATGTAGCCCTTAGGGAAATTACAGGTCCAACTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR TCA 72 bp | GACTCCCCCACAATGTATGCATGGAGAATGAGTTGCTaGGACGTCGAAATCCCAGTTCCTCGAACTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: DSPTMYAWRMSC*DVEIPVPRTDF Trigger: AAAATCAGTTCGAGGAACTGGGATTTCGACGTCTCAGCAACTCATTCTCCATGCATACATTGTGGGGGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 72 bp | CTGCCTGTGTCTGTTCCTTGTCCTGGCACTGGCACATaGACACTAACTCTACAAGACTATTGTGCAATGACT | + |
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Preference number: 3 (lower is better) Translates to: LPVSVPCPGTGT*TLTLQDYCAMT Trigger: AGTCATTGCACAATAGTCTTGTAGAGTTAGTGTTCATGTGCCAGTGCCAGGACAAGGAACAGACACAGGCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | CTTGCTGACCAGGTTTCTTATTGGGAGAAAGGGAGTTaGACCTGTAATTTCCCTAAGGGCTACATGACATTC | + |
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Preference number: 3 (lower is better) Translates to: LADQVSYWEKGS*TCNFPKGYMTF Trigger: GAATGTCATGTAGCCCTTAGGGAAATTACAGGTCCAACTCCCTTTCTCCCAATAAGAAACCTGGTCAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR CCA 72 bp | GGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTaGGAGAAGGGGGTAGGAATATCCAGGGTGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: GRQINFIQVCIV*EKGVGISRVDK Trigger: TTTGTCCACCCTGGATATTCCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| 3UTR GCA 72 bp | AGCCATCTTACCTACCTATACAGATTAGCTGTGAAATaGTACTGGGTCATTTGCTTTCTACTATGCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: SHLTYLYRLAVK*YWVICFLLCWD Trigger: GTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAGATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR GCA 72 bp | GAACAAAGACCAGAGAATTACCCCCACATTTCAGTATaGACCAATGTGTGTATTTCCACAGGTAGGTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: EQRPENYPHISV*TNVCISTGRSL Trigger: TAAGGACCTACCTGTGGAAATACACACATTGGTGCATACTGAAATGTGGGGGTAATTCTCTGGTCTTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR GCA 72 bp | TTGAACGAAGGTAGGCTATACAGATTAGCTGTGAAATaGTACTGGGTCATTTGCTTTCTACTATGCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LNEGRLYRLAVK*YWVICFLLCWD Trigger: GTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGCCTACCTTCGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
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| 3UTR CCA 72 bp | GATAGGCTAGCACAAGCTAACAAAAACTGTAAGCAGTaGGCTGCACTATGTAAGGTACTTCCCAGTTTAACA | + |
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Preference number: 3 (lower is better) Translates to: DRLAQANKNCKQ*AALCKVLPSLT Trigger: TGTTAAACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTGTGCTAGCCTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | GAAGGTAGGCTATACAGATTAGCTGTGAAATGCTACTaGGTCATTTGCTTTCTACTATGCTGGGACTTCACA | + |
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Preference number: 3 (lower is better) Translates to: EGRLYRLAVKCY*VICFLLCWDFT Trigger: TGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGCCTACCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
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| 3UTR GCA 72 bp | CTATACAGATTAGCTGTGAAATGCTACTGGGTCATTTaGTTTCTACTATGCTGGGACTTCACAGAACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LYRLAVKCYWVI*FLLCWDFTELS Trigger: GGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
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| 3UTR CCA 72 bp | CTTACCTACCTATACAGATTAGCTGTGAAATGCTACTaGGTCATTTGCTTTCTACTATGCTGGGACTTCACA | + |
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Preference number: 3 (lower is better) Translates to: LTYLYRLAVKCY*VICFLLCWDFT Trigger: TGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | GAACTGCAGCCTTTAGTAATGAACTCAGGATCCGACTaGTATGTGACGTGCTGGCATAGTAATTCAATAATT | + |
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Preference number: 3 (lower is better) Translates to: ELQPLVMNSGSD*YVTCWHSNSII Trigger: AATTATTGAATTACTATGCCAGCACGTCACATACCAGTCGGATCCTGAGTTCATTACTAAAGGCTGCAGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | TCAAGCAAGCAAGCAAAATCACCACTGACTTGGGATTaGACATTTAGCTTAGCATCAAGCATTAGCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: SSKQAKSPLTWD*TFSLASSISKC Trigger: GCATTTGCTAATGCTTGATGCTAAGCTAAATGTCCAATCCCAAGTCAGTGGTGATTTTGCTTGCTTGCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR GCA 72 bp | ATTTCAAAGCATGCTAGGCAGAATTGGATTATATTATaGACAGTACACATGTTCATCACCAACCCCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: ISKHARQNWIIL*TVHMFITNPRL Trigger: GAGTCTGGGGTTGGTGATGAACATGTGTACTGTGCATAATATAATCCAATTCTGCCTAGCATGCTTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CCA 72 bp | CCGTTTCTGATGGTAATTCATGATTTTAGACTTGTCTaGATAAGCAGAACACGAATTCTTAACATCTGTGCG | + |
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Preference number: 3 (lower is better) Translates to: PFLMVIHDFRLV*ISRTRILNICA Trigger: CGCACAGATGTTAAGAATTCGTGTTCTGCTTATCCAGACAAGTCTAAAATCATGAATTACCATCAGAAACGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR TCA 72 bp | TTTATGGATGAAGTCTTCATAGAAGACCCAGGAAAATaGTCTACAGATTACTATGTGATAGTACGGTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: FMDEVFIEDPGK*STDYYVIVRFL Trigger: CAAAAACCGTACTATCACATAGTAATCTGTAGATCATTTTCCTGGGTCTTCTATGAAGACTTCATCCATAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS-3UTR CCA 90 bp | AGGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGCACCGCTGTCGCCTGTaGTGGCCCCCGAGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RETDQLYSGLYSLGEGGRHRCRL*WPPRVG Trigger: TCCTACCCTCGGGGGCCACCACAGGCGACAGCGGTG...CCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
||
| CDS-3UTR CCA 90 bp | CAAGCTAACAAAAACTGTAAGCAGTGGGCTGCACTATGTAAGGTACTTCCCAGTCACCGCTGTCGCCTGTaGTGGCCCCCGAGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QANKNCKQWAALCKVLPSHRCRL*WPPRVG Trigger: TCCTACCCTCGGGGGCCACCACAGGCGACAGCGGTG...ACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAAGCACCGCTGTCGCCTGTaGTGGCCCCCGAGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESKGFIRLMLPHHSSASKHRCRL*WPPRVG Trigger: TCCTACCCTCGGGGGCCACCACAGGCGACAGCGGTG...CTTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| 3UTR CAA 72 bp | ACCAGACAGAGCAGGCAGAATTCCGAGGACGATGCTTaGGCTGCTCTCCTTCTACCTGACAAGCAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRQSRQNSEDDA*AALLLPDKQRR Trigger: TCTCCTCTGCTTGTCAGGTAGAAGGAGAGCAGCCAAAGCATCGTCCTCGGAATTCTGCCTGCTCTGTCTGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | GAAAGCCTTGCTGACAAAGGGAGTCCACCATCTGGCATGGAGCTTAAGGATATCCAGGCCTTGGACGTGTaGGGCAGCCTTCTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESLADKGSPPSGMELKDIQALDV*GSLLKQ Trigger: CTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTG...GATATCCTTAAGCTCCATGCCAGATGGTGGACTCCCTTTGTCAGCAAGGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
||
| CDS-3UTR GCA 90 bp | CGGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAACAGGCCTTGGACGTGTaGGGCAGCCTTCTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRAKGLFGLCFLITVQHQQALDV*GSLLKQ Trigger: CTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTG...TTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAGCCTTGCTGACAAAGGGAGTCCACCATCTGGCATGGAGCTTAAGGACCGAGGGCTTTCCATaGCTCCCATTTTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKALLTKGVHHLAWSLRTEGFP*LPFLLS Trigger: GGAAAGCAAAAATGGGAGGCATGGAAAGCCCTCGGT...CCTTAAGCTCCATGCCAGATGGTGGACTCCCTTTGTCAGCAAGGCTTTCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAGCCTTGCTGACAAAGGGAGTCCACCATCTGGCATGGAGCTTAAGGGCCGCGATATATTCCTaGATTGCTTGGCTAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EEKALLTKGVHHLAWSLRAAIYS*IAWLGL Trigger: AAGCCCTAGCCAAGCAATGCAGGAATATATCGCGGC...CCTTAAGCTCCATGCCAGATGGTGGACTCCCTTTGTCAGCAAGGCTTTCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCTAACAAAAACTGTAAGCAGTGGGCTGCACTATGTAAGGTACTTCCCAGTCTAGCTCTGTGCCGCTaGAGCAGCAGAGAGACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QANKNCKQWAALCKVLPSLALCR*SSRETA Trigger: AGCGGTCTCTCTGCTGCTGCAGCGGCACAGAGCTAG...ACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGACAGGCCTTGGACGTGTaGGGCAGCCTTCTCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SCEMLLGHLLSTMLGLHRQALDV*GSLLKQ Trigger: CTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTG...TCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | ATTAGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACCTAGCTCTGTGCCGCTaGAGCAGCAGAGAGACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISCEMLLGHLLSTMLGLHLALCR*SSRETA Trigger: AGCGGTCTCTCTGCTGCTGCAGCGGCACAGAGCTAG...GTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAACTTTCCTAATTGTCTTGGTCTCGGAGGGTaGGGTCAGCGCCAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGSFAFYYAGTSQNFPNCLGLGG*GQRQTG Trigger: TCCAGTCTGGCGCTGACCCCACCCTCCGAGACCAAG...ACAATTAGGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACGCCCGTCACCTCTTCTaGCAAGCAGCCGTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISCEMLLGHLLSTMLGLHARHLF*QAAVLV Trigger: GACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGC...GTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAAGAGGAGGGCAGGAACCTaGGGATTCCATCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESKGFIRLMLPHHSSASKRRAGT*GFHPGS Trigger: AGATCCAGGATGGAATCCTCAGGTTCCTGCCCTCCT...CTTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR CCA 90 bp | CCATCTTACCTACCTATACAGATTAGCTGTGAAATGCTACTGGGTCATTTGCTTGCCCGTCACCTCTTCTaGCAAGCAGCCGTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSYLPIQISCEMLLGHLLARHLF*QAAVLV Trigger: GACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGC...AAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAAGGACCGAGGGCTTTCCATaGCTCCCATTTTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAKGLFGLCFLITVQHQRTEGFP*LPFLLS Trigger: GGAAAGCAAAAATGGGAGGCATGGAAAGCCCTCGGT...CCTTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGATATTCCTGCATTGCTTaGCTAGGGCTTGAGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SCEMLLGHLLSTMLGLHRYSCIA*LGLESP Trigger: CGGTGACTCAAGCCCTAGCCAAGCAATGCAGGAATA...TCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAATATTCCTGCATTGCTTaGCTAGGGCTTGAGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GEQRVYSAYASSSQFSIKYSCIA*LGLESP Trigger: CGGTGACTCAAGCCCTAGCCAAGCAATGCAGGAATA...TTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR CCA 90 bp | TCAAAGCATGCTAGGCAGAATTGGATTATATTATGCACAGTACACATGTTCATCCGGTCACATGCCCAGTaGAGCAGAGCTCTGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKHARQNWIILCTVHMFIRSHAQ*SRALPS Trigger: AGAGGGCAGAGCTCTGCTCCACTGGGCATGTGACCG...GATGAACATGTGTACTGTGCATAATATAATCCAATTCTGCCTAGCATGCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCTCCGCCTTCAGTCTCTAGTGTTATTTACACACACACACACACACACACTTTTTCCCTTCTTCTCTaGTACCTGAGGATTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KAPPSVSSVIYTHTHTHTFSLLL*YLRIPS Trigger: GGATGGAATCCTCAGGTATCAGAGAAGAAGGGAAAA...AGTGTGTGTGTGTGTGTGTGTGTAAATAACACTAGAGACTGAAGGCGGAGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | AAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAACTTTCCACCGAGGGCTTTCCATaGCTCCCATTTTTGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCYWVICFLLCWDFTELSTEGFP*LPFLLS Trigger: GGAAAGCAAAAATGGGAGGCATGGAAAGCCCTCGGT...GGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | AAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAACTTTCCGCCGCGATATATTCCTaGATTGCTTGGCTAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCYWVICFLLCWDFTELSAAIYS*IAWLGL Trigger: AAGCCCTAGCCAAGCAATGCAGGAATATATCGCGGC...GGAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAAGGAAGCCGCGATATATTCCTaGATTGCTTGGCTAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKGFIRLMLPHHSSASKEAAIYS*IAWLGL Trigger: AAGCCCTAGCCAAGCAATGCAGGAATATATCGCGGC...TTCCTTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| 3UTR CAA 72 bp | AGAGGAGACAGCAGTGTTGGTCAGCTGGCTGACTCCTaGCTCCTCAGTATTAGAGAGGTTATTAACGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGDSSVGQLADS*LLSIREVINDL Trigger: TAAATCGTTAATAACCTCTCTAATACTGAGGAGCAAGGAGTCAGCCAGCTGACCAACACTGCTGTCTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| 3UTR CAA 72 bp | AGGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTaGGGAGAAGGGGGTAGGAATATCCAGGGTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RETDQLYSGLYS*GEGGRNIQGGQ Trigger: TTGTCCACCCTGGATATTCCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| CDS-3UTR TCA 90 bp | CAAGCTAACAAAAACTGTAAGCAGTGGGCTGCACTATGTAAGGTACTTCCCAGTTTCTTCTCTGATACCTaGGGATTCCATCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QANKNCKQWAALCKVLPSFFSDT*GFHPGS Trigger: AGATCCAGGATGGAATCCTCAGGTATCAGAGAAGAA...ACTGGGAAGTACCTTACATAGTGCAGCCCACTGCTTACAGTTTTTGTTAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| 3UTR CAA 72 bp | ACTGTAGTGCTGATGGGCACACTTTGCTTCTGTATTTaGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVVLMGTLCFCI*RKRERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCAAAATACAGAAGCAAAGTGTGCCCATCAGCACTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCACAGAACTTTCCTAATTGTCACTGTAGTGCTGATGGGCACACTTTGCTTCACCGAAACCACTACTaGCTTCTTTTCCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSQNFPNCHCSADGHTLLHRNHY*LLFPSS Trigger: AGAAGAAGGGAAAAGAAGGCAGTAGTGGTTTCGGTG...AAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGGAAAGTTCTGTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | TCGGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCACATGCCTCCCATTTTTaGTTTCCTTCAAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SESKGFIRLMLPHHSSASHASHF*FPSKSK Trigger: CTTTGATTTTGAAGGAAAGCAAAAATGGGAGGCATG...TGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR GCA 90 bp | ATTATTTTTGCAGTTTCTTTTATCCCGGAAGTCCTAGTCTGCCAAACTGTGCTTAGTGGAGCAGAGCTCTaGCCTCTTCATCTGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IIFAVSFIPEVLVCQTVLSGAEL*PLHLSY Trigger: ATATGACAGATGAAGAGGGCAGAGCTCTGCTCCACT...AAGCACAGTTTGGCAGACTAGGACTTCCGGGATAAAAGAAACTGCAAAAATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| 3UTR CAA 72 bp | CCTATACAGATTAGCTGTGAAATGCTACTGGGTCATTaGCTTTCTACTATGCTGGGACTTCACAGAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIQISCEMLLGH*LSTMLGLHRTF Trigger: GAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| 3UTR CAA 72 bp | GCTATACAGATTAGCTGTGAAATGCTACTGGGTCATTaGCTTTCTACTATGCTGGGACTTCACAGAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIQISCEMLLGH*LSTMLGLHRTF Trigger: GAAAGTTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
||
| 3UTR CAA 72 bp | GGGAGAAGGCTTTCTATGGGATTTCCTAATAATCAGTaGACTAACACGATGAAGCTAAGGTATCTACTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRRLSMGFPNNQ*TNTMKLRYLLV Trigger: AACCAGTAGATACCTTAGCTTCATCGTGTTAGTCAACTGATTATTAGGAAATCCCATAGAAAGCCTTCTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR GCA 90 bp | CCTAATTGTCACTGTAGTGCTGATGGGCACACTTTGCTTCTGTATTTTGAGAAACATGCCTCCCATTTTTaGTTTCCTTCAAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNCHCSADGHTLLLYFEKHASHF*FPSKSK Trigger: CTTTGATTTTGAAGGAAAGCAAAAATGGGAGGCATG...TTTCTCAAAATACAGAAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| 3UTR CAA 72 bp | TTTCCTAATTGTCACTGTAGTGCTGATGGGCACACTTaGCTTCAAAGATGGGCGGTAAAAGAAGTATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: FPNCHCSADGHT*LQRWAVKEVLF Trigger: AAATAATACTTCTTTTACCGCCCATCTTTGAAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
||
| 3UTR CAA 72 bp | TTAGTCTTGGTGAATGGTTTGTTTTTGCATCTCAGGTaGAACGAAGGTAGGCTATACAGATTAGCTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVNGLFLHLR*NEGRLYRLAVK Trigger: TTTCACAGCTAATCTGTATAGCCTACCTTCGTTCAACCTGAGATGCAAAAACAAACCATTCACCAAGACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192730.2 |
||
| CDS GCA 90 bp | CAGGAGCTGCTCCCGGCTGGCTACCTGAACCAGGCCTTGGACGTGTaGGGCAGCCTTCTCAAACAGCTCGGCCAAACTCCGGGTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QELLPAGYLNQALDV*GSLLKQLGQTPGPL Trigger: GAGGGGACCCGGAGTTTGGCCGAGCTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTAGCCAGCCGGGAGCAGCTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
||
| CDS CCA 90 bp | CCGCTGCAGCAGCAGAGAGACCGCTTTGCAGCCCGTCACCTCTTCTaGCAAGCAGCCGTCTTGGTCTCGGAGGGTGGGGTCAGCGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLQQQRDRFAARHLF*QAAVLVSEGGVSAR Trigger: TCTGGCGCTGACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTCTCTGCTGCTGCAGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
||
| CDS CCA 90 bp | GAGACCGCTTTGCAGCCCGTCACCTCTTCTGGCAAGCAGCCGTCTTaGTCTCGGAGGGTGGGGTCAGCGCCAGACTGGAGCAGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETALQPVTSSGKQPS*SRRVGSAPDWSSSS Trigger: GGAACTGCTGCTCCAGTCTGGCGCTGACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS CCA 90 bp | GGCAAGCAGCCGTCTTGGTCTCGGAGGGTGGGGTCAGCGCCAGACTaGAGCAGCAGTTCCACGATGTCCAAAAACTCGCAGGCAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GKQPSWSRRVGSAPD*SSSSTMSKNSQAAA Trigger: TGCCGCTGCCTGCGAGTTTTTGGACATCGTGGAACTGCTGCTCCAGTCTGGCGCTGACCCCACCCTCCGAGACCAAGACGGCTGCTTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS TCA 90 bp | TTGAACCTGGCATACAGGTACAGGAGCTGCTCCCGGCTGGCTACCTaGACCAGGCCTTGGACGTGTGCGGCAGCCTTCTCAAACAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNLAYRYRSCSRLAT*TRPWTCAAAFSNSS Trigger: CGAGCTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTAGCCAGCCGGGAGCAGCTCCTGTACCTGTATGCCAGGTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCTTGCTGACAAAGGGAGTCCACCATCTGGCATGGAGCTTAAGGATATCTACCTGAACCAGGCCTaGGACGTGTGCGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESLADKGSPPSGMELKDIYLNQA*DVCGSL Trigger: AAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTA...GATATCCTTAAGCTCCATGCCAGATGGTGGACTCCCTTTGTCAGCAAGGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
||
| CDS-3UTR CAA 90 bp | GCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGAATGGCAAGCAGCCGTCTaGGTCTCGGAGGGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVKCYWVICFLLCWDFTEWQAAV*VSEGGV Trigger: GACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCA...TTCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
||
| CDS-3UTR CAA 90 bp | ACTTCACAGAACTTTCCTAATTGTCACTGTAGTGCTGATGGGCACACTTTGCTTTGGCAAGCAGCCGTCTaGGTCTCGGAGGGTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSQNFPNCHCSADGHTLLWQAAV*VSEGGV Trigger: GACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCA...AAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGGAAAGTTCTGTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGAAATGCTACTGGGTCATTTGCTTTCTACTATGCTGGGACTTCACAGATACCTGAACCAGGCCTaGGACGTGTGCGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCEMLLGHLLSTMLGLHRYLNQA*DVCGSL Trigger: AAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTA...TCTGTGAAGTCCCAGCATAGTAGAAAGCAAATGACCCAGTAGCATTTCACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAATACCTGAACCAGGCCTaGGACGTGTGCGGCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GEQRVYSAYASSSQFSIKYLNQA*DVCGSL Trigger: AAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTA...TTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAAGGCCAACTTTGACCTGCTaGAACCTGGCATACAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: RAKGLFGLCFLITVQHQRPTLTC*NLAYRY Trigger: GTACCTGTATGCCAGGTTCAAGCAGGTCAAAGTTGG...CCTTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
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| CDS-3UTR CAA 90 bp | ACTTCACAGAACTTTCCTAATTGTCACTGTAGTGCTGATGGGCACACTTTGCTTCCAACTTTGACCTGCTaGAACCTGGCATACAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: TSQNFPNCHCSADGHTLLPTLTC*NLAYRY Trigger: GTACCTGTATGCCAGGTTCAAGCAGGTCAAAGTTGG...AAGCAAAGTGTGCCCATCAGCACTACAGTGACAATTAGGAAAGTTCTGTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS-3UTR CAA 90 bp | TCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGAATATCCAGGGTGGACAAAGGCCATGCCTCCCATTTTaGCTTTCCTTCAAAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: SGLYSLGEGGRNIQGGQRPCLPF*LSFKIK Trigger: TTTGATTTTGAAGGAAAGCAAAAATGGGAGGCATGG...CCTTTGTCCACCCTGGATATTCCTACCCCCTTCTCCCAAACTATACAGACCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| CDS-3UTR CAA 90 bp | TGTAGTGCTGATGGGCACACTTTGCTTCTGTATTTTGAGAAAGAGAGAGAGAGATCCGCAGCTTTCGATTaGATGGCTTTGGCTATATGG | + |
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Preference number: 5 (lower is better) Translates to: CSADGHTLLLYFEKERERSAAFD*MALAIW Trigger: CCATATAGCCAAAGCCATCAAATCGAAAGCTGCGGA...TCTCTCTCTCTCTTTCTCAAAATACAGAAGCAAAGTGTGCCCATCAGCACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS-3UTR CAA 90 bp | TCGGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCACCATGCCTCCCATTTTaGCTTTCCTTCAAAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: SESKGFIRLMLPHHSSASPCLPF*LSFKIK Trigger: TTTGATTTTGAAGGAAAGCAAAAATGGGAGGCATGG...TGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
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| CDS-3UTR CAA 90 bp | AAGGCTCCGCCTTCAGTCTCTAGTGTTATTTACACACACACACACACACACACTTTTGGTTTAGGAGTATaGCAATTTCCAACTTTGACC | + |
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Preference number: 5 (lower is better) Translates to: KAPPSVSSVIYTHTHTHTFGLGV*QFPTLT Trigger: GGTCAAAGTTGGAAATTGCAATACTCCTAAACCAAA...AGTGTGTGTGTGTGTGTGTGTGTAAATAACACTAGAGACTGAAGGCGGAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS-3UTR CAA 90 bp | AGGGAGACAGATCAACTTTATTCAGGTCTGTATAGTTTGGGAGAAGGGGGTAGGTTTGGTTTAGGAGTATaGCAATTTCCAACTTTGACC | + |
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Preference number: 5 (lower is better) Translates to: RETDQLYSGLYSLGEGGRFGLGV*QFPTLT Trigger: GGTCAAAGTTGGAAATTGCAATACTCCTAAACCAAA...CCTACCCCCTTCTCCCAAACTATACAGACCTGAATAAAGTTGATCTGTCTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097529.5 |
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| CDS-3UTR CAA 90 bp | GGAGAGCAAAGGGTTTATTCGGCTTATGCTTCCTCATCACAGTTCAGCATCAAATTTGGTTTAGGAGTATaGCAATTTCCAACTTTGACC | + |
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Preference number: 5 (lower is better) Translates to: GEQRVYSAYASSSQFSIKFGLGV*QFPTLT Trigger: GGTCAAAGTTGGAAATTGCAATACTCCTAAACCAAA...TTTGATGCTGAACTGTGATGAGGAAGCATAAGCCGAATAAACCCTTTGCTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080138.13 |
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| CDS-3UTR CAA 90 bp | CCATCTTACCTACCTATACAGATTAGCTGTGAAATGCTACTGGGTCATTTGCTTTTCGATTTGATGGCTTaGGCTATATGGTCAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: PSYLPIQISCEMLLGHLLFDLMA*AIWSML Trigger: CAACATTGACCATATAGCCAAAGCCATCAAATCGAA...AAGCAAATGACCCAGTAGCATTTCACAGCTAATCTGTATAGGTAGGTAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS-3UTR CAA 90 bp | TGCACCAATGTGTGTATTTCCACAGGTAGGTCCTTAAGCAATGATTTAAAAATGCCATGCCTCCCATTTTaGCTTTCCTTCAAAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: CTNVCISTGRSLSNDLKMPCLPF*LSFKIK Trigger: TTTGATTTTGAAGGAAAGCAAAAATGGGAGGCATGG...CATTTTTAAATCATTGCTTAAGGACCTACCTGTGGAAATACACACATTGGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS CCA 72 bp | TTGCAGCCCGTCACCTCTTCTGGCAAGCAGCCGTCTTaGTCTCGGAGGGTGGGGTCAGCGCCAGACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LQPVTSSGKQPS*SRRVGSAPDWS Trigger: GCTCCAGTCTGGCGCTGACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS CAA 72 bp | CAGGAGCTGCTCCCGGCTGGCTACCTGAACCAGGCCTaGGACGTGTGCGGCAGCCTTCTCAAACAGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: QELLPAGYLNQA*DVCGSLLKQLG Trigger: GCCGAGCTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTAGCCAGCCGGGAGCAGCTCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
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| CDS CCA 72 bp | CAGCAGAGAGACCGCTTTGCAGCCCGTCACCTCTTCTaGCAAGCAGCCGTCTTGGTCTCGGAGGGTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: QQRDRFAARHLF*QAAVLVSEGGV Trigger: GACCCCACCCTCCGAGACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTCTCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
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| CDS CAA 90 bp | CAAGCCTTGCTAGCTCTGTGCCGCTGCAGCAGCAGAGAGACCGCTTaGCAGCCCGTCACCTCTTCTGGCAAGCAGCCGTCTTGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: QALLALCRCSSRETA*QPVTSSGKQPSWSR Trigger: CCGAGACCAAGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTCTCTGCTGCTGCAGCGGCACAGAGCTAGCAAGGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
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| CDS TCA 72 bp | GCATACAGGTACAGGAGCTGCTCCCGGCTGGCTACCTaGACCAGGCCTTGGACGTGTGCGGCAGCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AYRYRSCSRLAT*TRPWTCAAAFS Trigger: TGAGAAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTAGCCAGCCGGGAGCAGCTCCTGTACCTGTATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
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| CDS CAA 72 bp | CTAGCTCTGTGCCGCTGCAGCAGCAGAGAGACCGCTTaGCAGCCCGTCACCTCTTCTGGCAAGCAGCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: LALCRCSSRETA*QPVTSSGKQPS Trigger: AGACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTCTCTGCTGCTGCAGCGGCACAGAGCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035560.9 ENSMUST00000192730.2 |
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| CDS CAA 90 bp | ATACAGGTACAGGAGCTGCTCCCGGCTGGCTACCTGAACCAGGCCTaGGACGTGTGCGGCAGCCTTCTCAAACAGCTCGGCCAAACTCCG | + |
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Preference number: 6 (lower is better) Translates to: IQVQELLPAGYLNQA*DVCGSLLKQLGQTP Trigger: CGGAGTTTGGCCGAGCTGTTTGAGAAGGCTGCCGCACACGTCCAAGGCCTGGTTCAGGTAGCCAGCCGGGAGCAGCTCCTGTACCTGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
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| CDS CCA 72 bp | CCGTCTTGGTCTCGGAGGGTGGGGTCAGCGCCAGACTaGAGCAGCAGTTCCACGATGTCCAAAAACTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSWSRRVGSAPD*SSSSTMSKNSQ Trigger: CTGCGAGTTTTTGGACATCGTGGAACTGCTGCTCCAGTCTGGCGCTGACCCCACCCTCCGAGACCAAGACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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| CDS TCA 72 bp | TGCCGCGATATATTCCTGCATTGCTTGGCTAGGGCTTaGGTCACCGAGGGCTTTCCATGCCTCCCATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CRDIFLHCLARA*VTEGFPCLPFL Trigger: CAAAAATGGGAGGCATGGAAAGCCCTCGGTGACTCAAGCCCTAGCCAAGCAATGCAGGAATATATCGCGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035560.9 ENSMUST00000080138.13 ENSMUST00000097529.5 |
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| CDS TCA 72 bp | CTTCATCTGTCATATTCACATCCGCAGCTTTCGATTTaGTGGCTTTGGCTATATGGTCAATGTTGTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LHLSYSHPQLSI*WLWLYGQCCFP Trigger: GGGAAAACAACATTGACCATATAGCCAAAGCCATCAAATCGAAAGCTGCGGATGTGAATATGACAGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035560.9 |
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