Pregenerated sensors for ACBD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056938Ensembl transcript IDs: ENSMUST00000024492.15, ENSMUST00000092559.13, ENSMUST00000107040.10, ENSMUST00000129870.8, ENSMUST00000134884.8, ENSMUST00000140372.8, ENSMUST00000152971.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAACGGAGAGCCCTAGGGGCCAAGGCCGAGTCCTGGGCGACCTCTaGTTGAGTGGCTGGGGCTTGCTCTCCAGGCTCTGTAGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GTESPRGQGRVLGDL*LSGWGLLSRLCSLL Trigger: CAGGAGGCTACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGACTCGGCCTTGGCCCCTAGGGCTCTCCGTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CCA 90 bp | GGTCTCTGGGTGGCCGGGACTCTGGACTTGGAGGCACTGGCTCCTTaGGGACACAAGAAGGCTCTGGAGCCGCCTGATCCTCTCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: GLWVAGTLDLEALAP*GHKKALEPPDPLSA Trigger: TGCAGAGAGAGGATCAGGCGGCTCCAGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR TCA 90 bp | TGCTTGAGTGGCTGGGGCTTGCTCTCCAGGCTCTGTAGCCTCCTGTaGACGTCCTTCATGCTTTCCTGCATGGCCCGGACTGTCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: CLSGWGLLSRLCSLL*TSFMLSCMARTVPT Trigger: GGTGGGGACAGTCCGGGCCATGCAGGAAAGCATGAAGGACGTTCACAGGAGGCTACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR GCA 90 bp | AACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTaGCCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: NLPANQSSGQVQVPT*PRAEPRQGAESSGA Trigger: TGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR GCA 90 bp | GGGGCTTGCTCTCCAGGCTCTGTAGCCTCCTGTGAACGTCCTTCATaGTTTCCTGCATGGCCCGGACTGTCCCCACCAGCCATGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GACSPGSVASCERPS*FPAWPGLSPPAMCP Trigger: TGGACACATGGCTGGTGGGGACAGTCCGGGCCATGCAGGAAAGCATGAAGGACGTTCACAGGAGGCTACAGAGCCTGGAGAGCAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CCA 90 bp | GAGCCGCCTGATCCTCTCTCTGCACCAACGGCTCCTTCCAACCTGTaGCCCTTCTCAAGAAGGTTTCTGGGGGCCTCGGCATGTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: EPPDPLSAPTAPSNL*PFSRRFLGASACQG Trigger: TCCCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGAAGGGCCACAGGTTGGAAGGAGCCGTTGGTGCAGAGAGAGGATCAGGCGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR CCA 90 bp | GTCACAGAAAACCTCCAGGTCCAGGTCTCTGGGTGGCCGGGACTCTaGACTTGGAGGCACTGGCTCCTTGGGGACACAAGAAGGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VTENLQVQVSGWPGL*TWRHWLLGDTRRLW Trigger: CCAGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR CCA 90 bp | CTGTTCCACGGAGTCACAGAAAACCTCCAGGTCCAGGTCTCTGGGTaGCCGGGACTCTGGACTTGGAGGCACTGGCTCCTTGGGGACACA | + |
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Preference number: 1 (lower is better) Translates to: LFHGVTENLQVQVSG*PGLWTWRHWLLGDT Trigger: TGTGTCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCTGTGACTCCGTGGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR CCA 90 bp | CTAGCTGTTCCACGGAGTCACAGAAAACCTCCAGGTCCAGGTCTCTaGGTGGCCGGGACTCTGGACTTGGAGGCACTGGCTCCTTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LAVPRSHRKPPGPGL*VAGTLDLEALAPWG Trigger: TCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCTGTGACTCCGTGGAACAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR CCA 90 bp | CACCAACGGCTCCTTCCAACCTGTGGCCCTTCTCAAGAAGGTTTCTaGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAA | + |
|
Preference number: 1 (lower is better) Translates to: HQRLLPTCGPSQEGF*GPRHVRDHLVQGLE Trigger: TTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGAAGGGCCACAGGTTGGAAGGAGCCGTTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR GCA 90 bp | AGGGATCACCTGGTACAGGGGCTCGAAATAACCAAACATATCCTCTaGCACCTCGCCCAGGGGCACTGTGTCGATCACCTTCTGTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RDHLVQGLEITKHIL*HLAQGHCVDHLLCH Trigger: GTGGCACAGAAGGTGATCGACACAGTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGTTATTTCGAGCCCCTGTACCAGGTGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR CCA 90 bp | GTCTTCTCAGTTGCTAGAGAGACCCCGTCCTTGAGTCACCTCTTCTaGGTCCGAAACTGTCGGAAGAGCCACTGGACAACGAAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: VFSVARETPSLSHLF*VRNCRKSHWTTKGH Trigger: GTGGCCCTTCGTTGTCCAGTGGCTCTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAAGGACGGGGTCTCTCTAGCAACTGAGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CCA 90 bp | TCCTTGAGTCACCTCTTCTGGGTCCGAAACTGTCGGAAGAGCCACTaGACAACGAAGGGCCACAGGATAAAGAAGAGCAGCGTGGGAACG | + |
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Preference number: 1 (lower is better) Translates to: SLSHLFWVRNCRKSH*TTKGHRIKKSSVGT Trigger: CGTTCCCACGCTGCTCTTCTTTATCCTGTGGCCCTTCGTTGTCCAGTGGCTCTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR TCA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAAACCTGCTGAGCTaGGGAGTCCCAGATCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRAEPRQGAESSGAKSGDPNLLS*GVPDPR Trigger: CCTGGGATCTGGGACTCCTCAGCTCAGCAGGTTTGG...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR GCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAAGTCCTGGGCGACCTCTaGTTGAGTGGCTGGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQVLGDL*LSGWGL Trigger: CAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGAC...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR CCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAAGTCCAGGTCTCTGGGTaGCCGGGACTCTGGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQVQVSG*PGLWTW Trigger: CCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGAC...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CAA 90 bp | AGAAAACCTCCAGGTCCAGGTCTCTGGGTGGCCGGGACTCTGGACTaGGAGGCACTGGCTCCTTGGGGACACAAGAAGGCTCTGGAGCCG | + |
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Preference number: 2 (lower is better) Translates to: RKPPGPGLWVAGTLD*EALAPWGHKKALEP Trigger: CGGCTCCAGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAAACCAAACATATCCTCTaGCACCTCGCCCAGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SRREQSQVTQRVGPAHRQTKHIL*HLAQGH Trigger: GTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGT...TTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATCTCTGCTTGAGTGGCTaGGGCTTGCTCTCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PPHSCGAPVFPATNLPANLCLSG*GLLSRL Trigger: GAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAG...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR CCA 90 bp | AGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAAAGCTGCAGGGAAAGATaGGTCTTATGGGAGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SRREQSQVTQRVGPAHRQSCRER*VLWEPP Trigger: TGGGGGCTCCCATAAGACCCATCTTTCCCTGCAGCT...TTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR TCA 90 bp | TCGGAAGAGCCACTGGACAACGAAGGGCCACAGGATAAAGAAGAGCAGCGTGGGGGCTCTGGAGCCGCCTaGTCCTCTCTCTGCACCAAC | + |
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Preference number: 2 (lower is better) Translates to: SEEPLDNEGPQDKEEQRGGSGAA*SSLCTN Trigger: GTTGGTGCAGAGAGAGGATCAGGCGGCTCCAGAGCC...CCCACGCTGCTCTTCTTTATCCTGTGGCCCTTCGTTGTCCAGTGGCTCTTCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCGACTGCTTTGGGAACTaGTTTTGGGGCGTAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QELSLGREPSRREQSQVTDCFGN*FWGVGV Trigger: CACACCTACGCCCCAAAAGCAGTTCCCAAAGCAGTC...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAAGGCTCCGGTCTTTCCTaGAACCAACCTTCCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQGSGLS*NQPSSQ Trigger: TTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCC...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATGGCGTAGGTGTGAGCTaGAGGGAAAGATGGGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: PPHSCGAPVFPATNLPANGVGVS*RERWVL Trigger: TAAGACCCATCTTTCCCTGCAGCTCACACCTACGCC...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAAGACTGCTTTGGGAACTaGTTTTGGGGCGTAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQDCFGN*FWGVGV Trigger: CACACCTACGCCCCAAAAGCAGTTCCCAAAGCAGTC...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTTCCTGCATGGCCCGGACTGTCCCCACCAGCCATGTGTCCAACTCCTGTCAGCTCTCTGCCAGCTaGTTCCTTCTGCTCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: MLSCMARTVPTSHVSNSCQLSAS*FLLLCP Trigger: TGGGCAGAGCAGAAGGAAGCAGCTGGCAGAGAGCTG...ACAGGAGTTGGACACATGGCTGGTGGGGACAGTCCGGGCCATGCAGGAAAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATTTTGGGAACTGCTTTTaGGGCGTAGGTGTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PPHSCGAPVFPATNLPANFGNCF*GVGVSC Trigger: GCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAA...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATTTGAGTCACCTCTTCTaGGTCCGAAACTGTCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: PPHSCGAPVFPATNLPANLSHLF*VRNCRK Trigger: CTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAA...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CAA 90 bp | CGGGGACTCATCATAGTCTTCTCAGTTGCTAGAGAGACCCCGTCCTaGAGTCACCTCTTCTGGGTCCGAAACTGTCGGAAGAGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: RGLIIVFSVARETPS*SHLFWVRNCRKSHW Trigger: CCAGTGGCTCTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAAGGACGGGGTCTCTCTAGCAACTGAGAAGACTATGATGAGTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR GCA 90 bp | CTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGTCCAAGTCCCAACTTaGCCAAGAGCTGAGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: LQPTFQPISLQARSKSQLVQVPT*PRAEPR Trigger: CCGAGGCTCAGCTCTTGGGCAAGTTGGGACTTGGAC...AAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTAGCTGCAGGGAAAGATaGGTCTTATGGGAGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVSCRER*VLWEPP Trigger: TGGGGGCTCCCATAAGACCCATCTTTCCCTGCAGCT...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTCTAGCTGTTCCACGGAGTCACAGAAAACCTCCAGGTCCAGGTCTCTGTCTCAAGAAGGTTTCTaGGGGCCTCGGCATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGSSCSTESQKTSRSRSLSQEGF*GPRHVR Trigger: CCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGA...CAGAGACCTGGACCTGGAGGTTTTCTGTGACTCCGTGGAACAGCTAGAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTGGCGTAGGTGTGAGCTaGAGGGAAAGATGGGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVGVGVS*RERWVL Trigger: TAAGACCCATCTTTCCCTGCAGCTCACACCTACGCC...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAGTTGCTAGAGAGACCCCGTCCTTGAGTCACCTCTTCTGGGTCCGAAACAGCTGCAGGGAAAGATaGGTCTTATGGGAGCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSVARETPSLSHLFWVRNSCRER*VLWEPP Trigger: TGGGGGCTCCCATAAGACCCATCTTTCCCTGCAGCT...GTTTCGGACCCAGAAGAGGTGACTCAAGGACGGGGTCTCTCTAGCAACTGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR TCA 90 bp | CAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGCCCAAGTTAGGATGTGCACCATaGCTGCTTTGGGAACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QPSSQSVFRPGPSPNLPKLGCAP*LLWELL Trigger: AAGCAGTTCCCAAAGCAGTCATGGTGCACATCCTAA...CTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTTTAGGATGTGCACCATaGCTGCTTTGGGAACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVLGCAP*LLWELL Trigger: AAGCAGTTCCCAAAGCAGTCATGGTGCACATCCTAA...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR CCA 90 bp | CAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGCCCAAGGAAAGATGGGTCTTATaGGAGCCCCCATTAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QPSSQSVFRPGPSPNLPKERWVL*EPPLKE Trigger: CTCCTTTAATGGGGGCTCCCATAAGACCCATCTTTC...CTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGTTTTCTTTTGTTTAATGAAGCGTTCAATTGCACGTGAATCTTCAGTGAAGTTAGGATGTGCACCATaGCTGCTTTGGGAACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: EVFFCLMKRSIARESSVKLGCAP*LLWELL Trigger: AAGCAGTTCCCAAAGCAGTCATGGTGCACATCCTAA...CTTCACTGAAGATTCACGTGCAATTGAACGCTTCATTAAACAAAAGAAAACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 |
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| 3UTR TCA 72 bp | TCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTaGCCCAGAGAGTGGGGCCGGCTCACCGCCAACCCC | + |
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Preference number: 3 (lower is better) Translates to: SAGSRVVGSKVR*PREWGRLTANP Trigger: GGGGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
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| 3UTR GCA 72 bp | AGCCCTAGGGGCCAAGGCCGAGTCCTGGGCGACCTCTaGTTGAGTGGCTGGGGCTTGCTCTCCAGGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SPRGQGRVLGDL*LSGWGLLSRLC Trigger: ACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGACTCGGCCTTGGCCCCTAGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCGCCGGGACTCTGGACTaGGAGGCACTGGCTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: QELSLGREPSRREQSQVTAGTLD*EALAPW Trigger: CCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGC...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CCA 72 bp | GTCTCTGGGTGGCCGGGACTCTGGACTTGGAGGCACTaGCTCCTTGGGGACACAAGAAGGCTCTGGAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: VSGWPGLWTWRH*LLGDTRRLWSR Trigger: GCGGCTCCAGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR-3UTR CAA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAATTGAGTGGCTGGGGCTaGCTCTCCAGGCTCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQLSGWG*LSRLCS Trigger: GCTACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAA...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
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| 3UTR CCA 72 bp | CCACGGAGTCACAGAAAACCTCCAGGTCCAGGTCTCTaGGTGGCCGGGACTCTGGACTTGGAGGCACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: PRSHRKPPGPGL*VAGTLDLEALA Trigger: AGCCAGTGCCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCTGTGACTCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACGAGCGCGATGTGTACTaGTGCGTGTGTACACGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PRAEPRQGAESSGAKSGDERDVY*CVCTRH Trigger: ATGCCGTGTACACACGCACAAGTACACATCGCGCTC...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTGGAGGCACTGGCTCCTaGGGGACACAAGAAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVGGTGS*GTQEGS Trigger: AGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCC...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| 3UTR CCA 72 bp | CTCCTTCCAACCTGTGGCCCTTCTCAAGAAGGTTTCTaGGGGCCTCGGCATGTCAGGGATCACCTGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLPTCGPSQEGF*GPRHVRDHLVQ Trigger: CTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGAAGGGCCACAGGTTGGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| 3UTR CCA 72 bp | GTTGCTAGAGAGACCCCGTCCTTGAGTCACCTCTTCTaGGTCCGAAACTGTCGGAAGAGCCACTGGACAACG | + |
|
Preference number: 3 (lower is better) Translates to: VARETPSLSHLF*VRNCRKSHWTT Trigger: CGTTGTCCAGTGGCTCTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAAGGACGGGGTCTCTCTAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| 3UTR GCA 72 bp | CTGGTACAGGGGCTCGAAATAACCAAACATATCCTCTaGCACCTCGCCCAGGGGCACTGTGTCGATCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVQGLEITKHIL*HLAQGHCVDHL Trigger: AAGGTGATCGACACAGTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGTTATTTCGAGCCCCTGTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| 3UTR CCA 72 bp | CACCTCTTCTGGGTCCGAAACTGTCGGAAGAGCCACTaGACAACGAAGGGCCACAGGATAAAGAAGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLFWVRNCRKSH*TTKGHRIKKSS Trigger: GCTGCTCTTCTTTATCCTGTGGCCCTTCGTTGTCCAGTGGCTCTTCCGACAGTTTCGGACCCAGAAGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| 3UTR TCA 72 bp | GGTTTTCTTTTGTTTAATGAAGCGTTCAATTGCACGTaGATCTTCAGTGAAGTCCTGAGCGCGATGTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: GFLLFNEAFNCT*IFSEVLSAMCT Trigger: AGTACACATCGCGCTCAGGACTTCACTGAAGATTCACGTGCAATTGAACGCTTCATTAAACAAAAGAAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| 3UTR CAA 72 bp | CCTAGGGGCCAAGGCCGAGTCCTGGGCGACCTCTGCTaGAGTGGCTGGGGCTTGCTCTCCAGGCTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRGQGRVLGDLC*SGWGLLSRLCS Trigger: GCTACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGACTCGGCCTTGGCCCCTAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| CDS-3UTR TCA 90 bp | TCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAACCTGGGCGACCTCTGCTTaGGTGGCTGGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGAKSGDPESGAGSPPTWATSA*VAGACS Trigger: AGAGCAAGCCCCAGCCACTCAAGCAGAGGTCGCCCA...GGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTTGGGCGACCTCTGCTTaGGTGGCTGGGGCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REPSRREQSQVTQRVGPAWATSA*VAGACS Trigger: AGAGCAAGCCCCAGCCACTCAAGCAGAGGTCGCCCA...AGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCGGGGCTGCTCCTGGTaGTCAGCTCTCTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAEPRQGAESSGAKSGDRGCSW*SALCQL Trigger: CAGCTGGCAGAGAGCTGACCACCAGGAGCAGCCCCG...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTACTCGGGGCTGCTCCTaGTGGTCAGCTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REPSRREQSQVTQRVGPATRGCS*WSALCQ Trigger: CTGGCAGAGAGCTGACCACCAGGAGCAGCCCCGAGT...AGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCCTCCTTCTCCCCAGTaGACTCGGGGCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QELSLGREPSRREQSQVTPPSPQ*TRGCSW Trigger: CCAGGAGCAGCCCCGAGTCCACTGGGGAGAAGGAGG...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCGGCTCTGGAGCCGCCTaGTCCTCTCTCTGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QELSLGREPSRREQSQVTGSGAA*SSLCTN Trigger: GTTGGTGCAGAGAGAGGATCAGGCGGCTCCAGAGCC...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCGTCCTGGGCGACCTCTaGTTGAGTGGCTGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QELSLGREPSRREQSQVTVLGDL*LSGWGL Trigger: CAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGAC...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCACTCGGGGCTGCTCCTaGTGGTCAGCTCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QELSLGREPSRREQSQVTTRGCS*WSALCQ Trigger: CTGGCAGAGAGCTGACCACCAGGAGCAGCCCCGAGT...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAAGGCTCTGGAGCCGCCTaGTCCTCTCTCTGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQGSGAA*SSLCTN Trigger: GTTGGTGCAGAGAGAGGATCAGGCGGCTCCAGAGCC...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAACCCAGCTCTCTGCCAGCTaGTTCCTTCTGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGAKSGDPESGAGSPPTQLSAS*FLLLCP Trigger: TGGGCAGAGCAGAAGGAAGCAGCTGGCAGAGAGCTG...GGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAACCCCTCCCTGCTCATCTTaGCTGTTCCAGGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGAKSGDPESGAGSPPTPPCSS*LFQASH Trigger: GTGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGG...GGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATGTCCAGGTCTCTGGGTaGCCGGGACTCTGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCGAPVFPATNLPANVQVSG*PGLWTW Trigger: CCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGAC...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCCAAACCTGCTGAGCTaGGGAGTCCCAGATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSPLLRGSGLSCNQPSSPNLLS*GVPDPR Trigger: CCTGGGATCTGGGACTCCTCAGCTCAGCAGGTTTGG...GCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATCCAAACCTGCTGAGCTaGGGAGTCCCAGATCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCGAPVFPATNLPANPNLLS*GVPDPR Trigger: CCTGGGATCTGGGACTCCTCAGCTCAGCAGGTTTGG...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCTCTGCCCAAACCTGCTaGGCTGAGGAGTCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QELSLGREPSRREQSQVTSAQTC*AEESQI Trigger: GATCTGGGACTCCTCAGCTCAGCAGGTTTGGGCAGA...GGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAACCCCTCCCTGCTCATCTTaGCTGTTCCAGGCATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGAKSGDPESGAGSPPTPPCSS*LFQASH Trigger: ATGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGG...GGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTGACACAAGAAGGCTCTaGAGCCGCCTGATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: REPSRREQSQVTQRVGPADTRRL*SRLILS Trigger: AGAGAGGATCAGGCGGCTCCAGAGCCTTCTTGTGTC...AGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAATGTGTCCAACTCCTGTaGGCCTATCAGGCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQCVQLL*AYQAAS Trigger: GGAGGCGGCCTGATAGGCCCACAGGAGTTGGACACA...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAGCTCTCTGCCAGCTaGTTCCTTCTGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSPLLRGSGLSCNQPSSQLSAS*FLLLCP Trigger: TGGGCAGAGCAGAAGGAAGCAGCTGGCAGAGAGCTG...GCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACTGGTGGTCAGCTCTCTaGCAGCTGCTTCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRAEPRQGAESSGAKSGDWWSAL*QLLPSA Trigger: AGCAGAAGGAAGCAGCTGGCAGAGAGCTGACCACCA...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGTCTCAAGAAGGTTTCTaGGGGCCTCGGCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQELSLGREPSRREQSQSQEGF*GPRHVR Trigger: CCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGA...CTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCGAGGCACTGGCTCCTTaGGGACACAAGAAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSPLLRGSGLSCNQPSSEALAP*GHKKAL Trigger: CAGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTC...GCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTGTCGATCACCTTCTGTaGCACCAGCTTCATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: REPSRREQSQVTQRVGPAVDHLL*HQLHLR Trigger: TCTGAGATGAAGCTGGTGGCACAGAAGGTGATCGAC...AGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTCCTCCTTCTCCCCAGTaGACTCGGGGCTGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVPPSPQ*TRGCSW Trigger: CCAGGAGCAGCCCCGAGTCCACTGGGGAGAAGGAGG...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CACTCCTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAATTCTTAGGCAGGTTCTaGATGACGCTGACTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSHSSPLLRGSGLSCNQFLGRF*MTLTAA Trigger: GGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAA...TTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCCAATCTCTGTAGCCTCCTGTaGACGTCCTTCATGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPHSCGAPVFPATNLPANLCSLL*TSFMLS Trigger: GGAAAGCATGAAGGACGTTCACAGGAGGCTACAGAG...ATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAACCCTGAATGACGCTGACTaGTGCCTGGAACTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGAKSGDPESGAGSPPTLNDAD*CLELFL Trigger: CAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAG...GGTTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | AGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTCACCGCCAAGTCGATCACCTTCTGTaGCACCAGCTTCATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRREQSQVTQRVGPAHRQVDHLL*HQLHLR Trigger: TCTGAGATGAAGCTGGTGGCACAGAAGGTGATCGAC...TTGGCGGTGAGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACGCTCCTTCCAACCTGTaGCCCTTCTCAAGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAEPRQGAESSGAKSGDAPSNL*PFSRRF Trigger: AAACCTTCTTGAGAAGGGCCACAGGTTGGAAGGAGC...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGCCCAAGGTCCAGGTCTCTGGGTaGCCGGGACTCTGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSQSVFRPGPSPNLPKVQVSG*PGLWTW Trigger: CCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGAC...CTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTCGGGGCTGCTCCTGGTaGTCAGCTCTCTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLRGCSW*SALCQL Trigger: CAGCTGGCAGAGAGCTGACCACCAGGAGCAGCCCCG...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | GTGGCCCTTCTCAAGAAGGTTTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTTCTTAGGCAGGTTCTaGATGACGCTGACTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VALLKKVSGGLGMSGITWFLGRF*MTLTAA Trigger: GGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAA...CCAGGTGATCCCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGAAGGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACCCAGAGAGTGGGGCCGGCTAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: REPSRREQSQVTQRVGPANDADC*LELFLT Trigger: TGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATT...AGCCGGCCCCACTCTCTGGGTCACCTGACTTTGCTCCCGACGACTCGGCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCACCAAACATATCCTCTaGCACCTCGCCCAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGRLRAQQDLSGTHHSLLTKHIL*HLAQGH Trigger: GTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGT...GAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTGTCCTGGGCGACCTCTaGTTGAGTGGCTGGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLVLGDL*LSGWGL Trigger: CAAGCCCCAGCCACTCAAGCAGAGGTCGCCCAGGAC...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAACCTCCAGGTCCAGGTCTCTGGGTGGCCGGGACTCTGGACTTGGAGGACATGGCTTCCTCCCTaGTCATCTTGCCTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TENLQVQVSGWPGLWTWRTWLPP*SSCLFQ Trigger: CTGGAACAGGCAAGATGAGCAGGGAGGAAGCCATGT...CCTCCAAGTCCAGAGTCCCGGCCACCCAGAGACCTGGACCTGGAGGTTTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CCA 90 bp | CATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCCAGCGCTCCTTCCAACCTGTaGCCCTTCTCAAGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSPLLRGSGLSCNQPSSAPSNL*PFSRRF Trigger: AAACCTTCTTGAGAAGGGCCACAGGTTGGAAGGAGC...GCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGCCCAAGTGTGTCCAACTCCTGTaGGCCTATCAGGCCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPSSQSVFRPGPSPNLPKCVQLL*AYQAAS Trigger: GGAGGCGGCCTGATAGGCCCACAGGAGTTGGACACA...CTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTTCTGCCCAAACCTGCTaGGCTGAGGAGTCCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVSAQTC*AEESQI Trigger: GATCTGGGACTCCTCAGCTCAGCAGGTTTGGGCAGA...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LAQELSLGREPSRREQSQNDADC*LELFLT Trigger: TGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATT...CTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGGGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTGCCCAAGACCAAACATATCCTCTaGCACCTCGCCCAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPSSQSVFRPGPSPNLPKTKHIL*HLAQGH Trigger: GTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGT...CTTGGGCAAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CTAGGGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCTGGTGGTCAGCTCTCTaGCAGCTGCTTCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGRLRAQQDLSGTHHSLLWWSAL*QLLPSA Trigger: AGCAGAAGGAAGCAGCTGGCAGAGAGCTGACCACCA...GAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTCTCTGCTTGAGTGGCTaGGGCTTGCTCTCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQPTFQPISLQARSKSQLLCLSG*GLLSRL Trigger: GAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAG...AAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTCTGCTTGAGTGGCTaGGGCTTGCTCTCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLQPTFQPISLQARSKSQLCLSG*GLLSRL Trigger: GAGCCTGGAGAGCAAGCCCCAGCCACTCAAGCAGAG...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTCGACCTCTGCTTGAGTaGCTGGGGCTTGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLRPLLE*LGLALQ Trigger: CTGGAGAGCAAGCCCCAGCCACTCAAGCAGAGGTCG...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACGACCTCTGCTTGAGTaGCTGGGGCTTGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLQPTFQPISLQARSKSQRPLLE*LGLALQ Trigger: CTGGAGAGCAAGCCCCAGCCACTCAAGCAGAGGTCG...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCAAGAAGGTTTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGTTCTTAGGCAGGTTCTaGATGACGCTGACTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSRRFLGASACQGSPGTGFLGRF*MTLTAA Trigger: GGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAA...CCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTTCCTTCATGCTTTCCTaGATGGCCCGGACTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLSFMLS*MARTVP Trigger: GGGGACAGTCCGGGCCATGCAGGAAAGCATGAAGGA...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAATCCTTCATGCTTTCCTaGATGGCCCGGACTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQPTFQPISLQARSKSQSFMLS*MARTVP Trigger: GGGGACAGTCCGGGCCATGCAGGAAAGCATGAAGGA...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | AATAACCAAACATATCCTCTGCCACCTCGCCCAGGGGCACTGTGTCGATCACCTCCTCCCTGCTCATCTTaGCTGTTCCAGGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNQTYPLPPRPGALCRSPPPCSS*LFQASH Trigger: GTGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGG...AGGTGATCGACACAGTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTATGGTCTCAAGAAGGTTTCTaGGGGCCTCGGCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNCFWGVGVSCRERWVLWSQEGF*GPRHVR Trigger: CCTGACATGCCGAGGCCCCCAGAAACCTTCTTGAGA...CCATAAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTTGTCGGAAGAGCCACTaGACAACGAAGGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPTFQPISLQARSKSQLCRKSH*TTKGHR Trigger: CCTGTGGCCCTTCGTTGTCCAGTGGCTCTTCCGACA...AAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCTTGGGGACACAAGAAGGCTCTGGAGCCGCCTGATCCTCTCTCTGCACAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: WLLGDTRRLWSRLILSLHNDADC*LELFLT Trigger: TGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATT...GTGCAGAGAGAGGATCAGGCGGCTCCAGAGCCTTCTTGTGTCCCCAAGGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTTACTTGTAACGTCCAATaGGGTCCCAGAACCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQPTFQPISLQARSKSQLTCNVQ*GPRTQA Trigger: GGCCTGGGTTCTGGGACCCCATTGGACGTTACAAGT...AAGTTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 |
||
| CDS-3UTR CCA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAAACTTGTAACGTCCAATaGGGTCCCAGAACCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQPTFQPISLQARSKSQTCNVQ*GPRTQA Trigger: GGCCTGGGTTCTGGGACCCCATTGGACGTTACAAGT...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 |
||
| CDS-3UTR CCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTGACACAAGAAGGCTCTaGAGCCGCCTGATCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLDTRRL*SRLILS Trigger: AGAGAGGATCAGGCGGCTCCAGAGCCTTCTTGTGTC...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR TCA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAACTCTGTAGCCTCCTGTaGACGTCCTTCATGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQPTFQPISLQARSKSQLCSLL*TSFMLS Trigger: GGAAAGCATGAAGGACGTTCACAGGAGGCTACAGAG...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTACATGGCTTCCTCCCTaGTCATCTTGCCTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWELLLGRRCELQGKMGLTWLPP*SSCLFQ Trigger: CTGGAACAGGCAAGATGAGCAGGGAGGAAGCCATGT...AAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGATCACCTGGTACAGGGGCTCGAAATAACCAAACATATCCTCTGCCACACATGGCTTCCTCCCTaGTCATCTTGCCTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRDHLVQGLEITKHILCHTWLPP*SSCLFQ Trigger: CTGGAACAGGCAAGATGAGCAGGGAGGAAGCCATGT...GTGGCAGAGGATATGTTTGGTTATTTCGAGCCCCTGTACCAGGTGATCCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCAGGGATCACCTGGTACAGGGGCTCGAAATAACCAAACATATCCTCTGCACTTGTAACGTCCAATaGGGTCCCAGAACCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVRDHLVQGLEITKHILCTCNVQ*GPRTQA Trigger: GGCCTGGGTTCTGGGACCCCATTGGACGTTACAAGT...GCAGAGGATATGTTTGGTTATTTCGAGCCCCTGTACCAGGTGATCCCTGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCAGTTAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GGSGHSRTFRGLIIVFSVNDADC*LELFLT Trigger: TGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATT...AACTGAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| 3UTR CAA 72 bp | ATCATAGTCTTCTCAGTTGCTAGAGAGACCCCGTCCTaGAGTCACCTCTTCTGGGTCCGAAACTGTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIVFSVARETPS*SHLFWVRNCRK Trigger: CTTCCGACAGTTTCGGACCCAGAAGAGGTGACTCAAGGACGGGGTCTCTCTAGCAACTGAGAAGACTATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092559.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGGGTTTACGAGGGTGGGAGGAGGAATTTCTAAAGTTGTTTTTCTAAACTGTCGGAAGAGCCACTaGACAACGAAGGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGFTRVGGGISKVVFLNCRKSH*TTKGHR Trigger: CCTGTGGCCCTTCGTTGTCCAGTGGCTCTTCCGACA...GTTTAGAAAAACAACTTTAGAAATTCCTCCTCCCACCCTCGTAAACCCTGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | CCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGACGCCGGGACTCTGGACTaGGAGGCACTGGCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRAEPRQGAESSGAKSGDAGTLD*EALAPW Trigger: CCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGC...GTCACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGAGCTGAGCCTCGGCAGGGAGCCGAGTCGTCGGGAGCAAAGTCAGGTGGGAGGCACTGGCTCCTaGGGGACACAAGAAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AQELSLGREPSRREQSQVGGTGS*GTQEGS Trigger: AGAGCCTTCTTGTGTCCCCAAGGAGCCAGTGCCTCC...CACCTGACTTTGCTCCCGACGACTCGGCTCCCTGCCGAGGCTCAGCTCTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | CTCCCATTCCTCCCCACTCCTGCGGGGCTCCGGTCTTTCCTGCAACCAACCTTCTTGAGTGGCTGGGGCTaGCTCTCCAGGCTCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPFLPTPAGLRSFLQPTFLSGWG*LSRLCS Trigger: GCTACAGAGCCTGGAGAGCAAGCCCCAGCCACTCAA...GAAGGTTGGTTGCAGGAAAGACCGGAGCCCCGCAGGAGTGGGGAGGAATGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | TTCCTGCAACCAACCTTCCAGCCAATCAGTCTTCAGGCCAGGTCCAAGTCCCAAGCCGGGACTCTGGACTaGGAGGCACTGGCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLQPTFQPISLQARSKSQAGTLD*EALAPW Trigger: CCAAGGAGCCAGTGCCTCCAAGTCCAGAGTCCCGGC...TTGGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024492.15 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | CTAGGGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCTCCTCCCTGCTCATCTaGCCTGTTCCAGGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGRLRAQQDLSGTHHSLLSSLLI*PVPGIP Trigger: TGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGGA...GAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | GGGAACTGCTTTTGGGGCGTAGGTGTGAGCTGCAGGGAAAGATGGGTCTTATGGTCCTCCCTGCTCATCTaGCCTGTTCCAGGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GNCFWGVGVSCRERWVLWSSLLI*PVPGIP Trigger: TGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGGA...CCATAAGACCCATCTTTCCCTGCAGCTCACACCTACGCCCCAAAAGCAGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | GCAGTCTCACCAACTCTGGCTCTAGCTGTTCCACGGAGTCACAGAAAACCTCCATCCTCCCTGCTCATCTaGCCTGTTCCAGGCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVSPTLALAVPRSHRKPPSSLLI*PVPGIP Trigger: TGGGATGCCTGGAACAGGCAAGATGAGCAGGGAGGA...TGGAGGTTTTCTGTGACTCCGTGGAACAGCTAGAGCCAGAGTTGGTGAGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS GCA 90 bp | GGGGCGGTAAGAGCCATTCTTAGGCAGGTTCTGAATGACGCTGACTaGTGCCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAVRAILRQVLNDAD*CLELFLTVGLFLLG Trigger: ACCGAGAAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGCTCTTACCGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGAGGCTCAGGGCACAGCAGGACCTTTCGGGGACTCATCATAGTCTTCTCTGCCTGGAACTGTTTTaGACAGTCGGGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGRLRAQQDLSGTHHSLLCLELF*TVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCA...GAGAAGACTATGATGAGTCCCCGAAAGGTCCTGCTGTGCCCTGAGCCTCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS-3UTR CAA 90 bp | GTACAGGGGCTCGAAATAACCAAACATATCCTCTGCCACCTCGCCCAGGGGCACTGCCTGGAACTGTTTTaGACAGTCGGGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VQGLEITKHILCHLAQGHCLELF*TVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCA...GTGCCCCTGGGCGAGGTGGCAGAGGATATGTTTGGTTATTTCGAGCCCCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAATAACCAAATGCCTGGAACTGTTTTaGACAGTCGGGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WGPRHVRDHLVQGLEITKCLELF*TVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCA...TTTGGTTATTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS GCA 90 bp | GCGGTAAGAGCCATTCTTAGGCAGGTTCTGAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTTCTCGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AVRAILRQVLNDADC*LELFLTVGLFLLGT Trigger: GGTACCGAGAAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGCTCTTACCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000129870.8 |
||
| CDS GCA 90 bp | TCCAGGCATCCCATTCTTAGGCAGGTTCTGAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTTCTCGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SRHPILRQVLNDADC*LELFLTVGLFLLGT Trigger: GGTACCGAGAAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGGATGCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107040.10 ENSMUST00000134884.8 ENSMUST00000140372.8 ENSMUST00000152971.2 |
||
| CDS GCA 90 bp | TGTTCCAGGCATCCCATTCTTAGGCAGGTTCTGAATGACGCTGACTaGTGCCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSRHPILRQVLNDAD*CLELFLTVGLFLLG Trigger: ACCGAGAAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGGATGCCTGGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107040.10 ENSMUST00000134884.8 ENSMUST00000140372.8 ENSMUST00000152971.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGGGTTTACGAGGGTGGGAGGAGGAATTTCTAAAGTTGTTTTTCTAAACTGCCTGGAACTGTTTTaGACAGTCGGGCTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VPGFTRVGGGISKVVFLNCLELF*TVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCA...GTTTAGAAAAACAACTTTAGAAATTCCTCCTCCCACCCTCGTAAACCCTGGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000107040.10 |
||
| CDS GCA 72 bp | GCCATTCTTAGGCAGGTTCTGAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AILRQVLNDADC*LELFLTVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| CDS GCA 72 bp | AGAGCCATTCTTAGGCAGGTTCTGAATGACGCTGACTaGTGCCTGGAACTGTTTTTGACAGTCGGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RAILRQVLNDAD*CLELFLTVGLF Trigger: GAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024492.15 ENSMUST00000092559.13 ENSMUST00000129870.8 |
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| CDS GCA 72 bp | CCCATTCTTAGGCAGGTTCTGAATGACGCTGACTGCTaGCTGGAACTGTTTTTGACAGTCGGGCTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PILRQVLNDADC*LELFLTVGLFL Trigger: AAGGAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107040.10 ENSMUST00000134884.8 ENSMUST00000140372.8 ENSMUST00000152971.2 |
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| CDS GCA 72 bp | CATCCCATTCTTAGGCAGGTTCTGAATGACGCTGACTaGTGCCTGGAACTGTTTTTGACAGTCGGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HPILRQVLNDAD*CLELFLTVGLF Trigger: GAAGAGCCCGACTGTCAAAAACAGTTCCAGGCAGCAGTCAGCGTCATTCAGAACCTGCCTAAGAATGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107040.10 ENSMUST00000134884.8 ENSMUST00000140372.8 ENSMUST00000152971.2 |
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