Pregenerated sensors for ACBD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026499Ensembl transcript IDs: ENSMUST00000027780.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTTTTGTGAGCAGCAATGTGAATGGCAAATGAAGGAAAGGCCGTaGGTCCAGGGACCTGGTGGGATGGGTGCTGAGGTCGTCTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: LFCEQQCEWQMKERP*VQGPGGMGAEVVCE Trigger: TTCACAGACGACCTCAGCACCCATCCCACCAGGTCCCTGGACTCACGGCCTTTCCTTCATTTGCCATTCACATTGCTGCTCACAAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CCA 90 bp | GGACTGTGGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTaGGCTGTCTCCGGCAGTGATTTCCTGTTAGTGCAATGGTACTCC | + |
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Preference number: 1 (lower is better) Translates to: GLWSGLCPNNNYKEM*AVSGSDFLLVQWYS Trigger: GGAGTACCATTGCACTAACAGGAAATCACTGCCGGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CCA 90 bp | GTGCATTTCCAATTCTCTCTAGACTGTGACTCCACACTGGGACTGTaGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VHFQFSLDCDSTLGL*SGLCPNNNYKEMWA Trigger: AGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAGTCCCAGTGTGGAGTCACAGTCTAGAGAGAATTGGAAATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CAA 90 bp | CAATTCTCTCTAGACTGTGACTCCACACTGGGACTGTGGAGTGGTTaGTGCCCTAATAACAACTACAAGGAAATGTGGGCTGTCTCCGGC | + |
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Preference number: 2 (lower is better) Translates to: QFSLDCDSTLGLWSG*CPNNNYKEMWAVSG Trigger: GCCGGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAGTCCCAGTGTGGAGTCACAGTCTAGAGAGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGTATCATTTAAGCACGTGCATTTCCAATTCTCTCTAGACTGTGACTCCACAAGGCACAGACAGCAATaGGCCCTCCAGCCAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: AVSFKHVHFQFSLDCDSTRHRQQ*ALQPGQ Trigger: CTGACCTGGCTGGAGGGCGCATTGCTGTCTGTGCCT...TGTGGAGTCACAGTCTAGAGAGAATTGGAAATGCACGTGCTTAAATGATACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTGCGTTGAAGCTGGGACGTTTATTCTaGAGACTGAATATTAACACG | + |
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Preference number: 2 (lower is better) Translates to: LGEVSNCQSTQSKPAALKLGRLF*RLNINT Trigger: CGTGTTAATATTCAGTCTCCAGAATAAACGTCCCAG...CTTCAACGCAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTTGAGGAATCCTGGTTCTCAATaGGTTCATAAACCCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SCTQSKSSLGYSGKIKLRNPGSQ*VHKPSE Trigger: TTCTGAGGGTTTATGAACTCATTGAGAACCAGGATT...CCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR-3UTR TCA 90 bp | CTGTGGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTGGGCTGTCTCCTTCTACTATACTTGGTaGAGTCTCAAACTGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LWSGLCPNNNYKEMWAVSFYYTW*SLKLSK Trigger: CTTTGACAGTTTGAGACTTCACCAAGTATAGTAGAA...GGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CAA 90 bp | TACTCAGGTAAGATCAAGTTGAGGCCATTTGTTTTTCTACTATACTaGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: YSGKIKLRPFVFLLY*VKSQTVKALSQSQL Trigger: CAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAGTATAGTAGAAAAACAAATGGCCTCAACTTGATCTTACCTGAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CAA 90 bp | TGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTaGAGGCCATTTGTTTTTCTACTATACTTGGTGAAGTCTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: CTQSKSSLGYSGKIK*RPFVFLLYLVKSQT Trigger: AGTTTGAGACTTCACCAAGTATAGTAGAAAAACAAATGGCCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR GCA 72 bp | AACTGTGGCTGTGCACAACACAGGCACAGACAGCAATaGGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACG | + |
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Preference number: 3 (lower is better) Translates to: NCGCAQHRHRQQ*ALQPGQGNAGT Trigger: CGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGCTGTCTGTGCCTGTGTTGTGCACAGCCACAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR TCA 72 bp | GAGTTCTGTTTTGTGAGCAGCAATGTGAATGGCAAATaGAGGAAAGGCCGTGAGTCCAGGGACCTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: EFCFVSSNVNGK*RKGRESRDLVG Trigger: TCCCACCAGGTCCCTGGACTCACGGCCTTTCCTTCATTTGCCATTCACATTGCTGCTCACAAAACAGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR-3UTR CAA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCAAATTAAACGTCATGTaGTGCTCAACCCTAGACTCC | + |
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Preference number: 3 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGKLNVM*CSTLDS Trigger: GGAGTCTAGGGTTGAGCACAACATGACGTTTAATTT...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR TCA 72 bp | GGACCTGTGATGTCAAAGTTAAACCTAAGACTTCAGTaGCAATACACTAGGTGTGTACTGTCTCTGTCATTT | + |
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Preference number: 3 (lower is better) Translates to: GPVMSKLNLRLQ*QYTRCVLSLSF Trigger: AAATGACAGAGACAGTACACACCTAGTGTATTGTCACTGAAGTCTTAGGTTTAACTTTGACATCACAGGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR TCA 90 bp | ACAGACAGCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTATGATCCTTCCTCATaGGTCGGGACTCGGACGGTG | + |
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Preference number: 4 (lower is better) Translates to: TDSNAPSSQVRATLGRLFYDPSS*VGTRTV Trigger: CACCGTCCGAGTCCCGACTCATGAGGAAGGATCATA...GAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGCTGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGGAGACCTCCCTGGATACTGGTaGCTGCCTGCATATACTTCC | + |
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Preference number: 4 (lower is better) Translates to: AMRPPARSGQRWDVYSGDLPGYW*LPAYTS Trigger: GGAAGTATATGCAGGCAGCCACCAGTATCCAGGGAG...GTCTCCAGAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | GCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGGAGACGGGCCCAAAAGAACTTaGTTATGCAGTGCCACGAAC | + |
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Preference number: 4 (lower is better) Translates to: AMRPPARSGQRWDVYSGDGPKRT*LCSATN Trigger: GTTCGTGGCACTGCATAAGCAAGTTCTTTTGGGCCC...GTCTCCAGAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | GCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGGAGACTTCCAAGGCTTCTTCTaGAGCTTCTGGCTCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AMRPPARSGQRWDVYSGDFQGFF*SFWLKD Trigger: GTCCTTGAGCCAGAAGCTGCAGAAGAAGCCTTGGAA...GTCTCCAGAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | ACAGACAGCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCGCCATCACTACTTCTTaGTGTTTCTGTAATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TDSNAPSSQVRATLGRLFAITTS*CFCNAA Trigger: GGCAGCATTACAGAAACAGCAAGAAGTAGTGATGGC...GAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGCTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR TCA 90 bp | ACAGACAGCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGTGCAAGCTGGACTTaGTATAACTGCTGCATATAC | + |
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Preference number: 4 (lower is better) Translates to: TDSNAPSSQVRATLGRLFCASWT*YNCCIY Trigger: GTATATGCAGCAGTTATATCAAGTCCAGCTTGCACA...GAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGCTGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | CACGTAGCTCATGTAACTCCAATATCCACTAGCAGCTCTGCTGGTCAGCACCCACTCAGGGGACGTGTCTaGGTTATATGGGCCCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: HVAHVTPISTSSSAGQHPLRGRV*VIWAQK Trigger: CTTTTGGGCCCATATAACCCAGACACGTCCCCTGAG...TGGGTGCTGACCAGCAGAGCTGCTAGTGGATATTGGAGTTACATGAGCTACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGGAGACAAAGTCTTTGATTTGTaGTCTTGTCCACATGGATGG | + |
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Preference number: 4 (lower is better) Translates to: AMRPPARSGQRWDVYSGDKVFDL*SCPHGW Trigger: CCATCCATGTGGACAAGACCACAAATCAAAGACTTT...GTCTCCAGAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCTCTTCCTCTTCACGCTaGCTTCGCTCCTCCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPSSSSR*LRSSSA Trigger: GGCGGAGGAGGAGCGAAGGCAGCGTGAAGAGGAAGA...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | CACGTAGCTCATGTAACTCCAATATCCACTAGCAGCTCTGCTGGTCAGCACCCAGCATACTGCTGGAATTaGACGGCAGTCTGCGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: HVAHVTPISTSSSAGQHPAYCWN*TAVCEF Trigger: AAACTCGCAGACTGCCGTGCAATTCCAGCAGTATGC...TGGGTGCTGACCAGCAGAGCTGCTAGTGGATATTGGAGTTACATGAGCTACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | CTTGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTGCGTTGAAGTGCTGGGCTGCATACTaGTGGAATTGCACGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LGEVSNCQSTQSKPAALKCWAAY*WNCTAV Trigger: GACTGCCGTGCAATTCCAGCAGTATGCAGCCCAGCA...CTTCAACGCAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | CACGTAGCTCATGTAACTCCAATATCCACTAGCAGCTCTGCTGGTCAGCACCCACTGGATACTGGTGGCTaGCTGCATATACTTCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: HVAHVTPISTSSSAGQHPLDTGG*LHILPR Trigger: ACGAGGAAGTATATGCAGGCAGCCACCAGTATCCAG...TGGGTGCTGACCAGCAGAGCTGCTAGTGGATATTGGAGTTACATGAGCTACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | CTTGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTGCGTTGAAGTGCTGCTCCTGCAGCTaGCGGATGAGAATCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGEVSNCQSTQSKPAALKCCSCS*RMRICC Trigger: ACAGCAGATTCTCATCCGCCAGCTGCAGGAGCAGCA...CTTCAACGCAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCGTGGTCTTGTCCACATaGATGGAGCTGCAATCACTG | + |
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Preference number: 4 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGVVLST*MELQSL Trigger: CAGTGATTGCAGCTCCATCCATGTGGACAAGACCAC...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR TCA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCTGCAGCTGGCGGATaGGAATCTGCTGTTGTTCGT | + |
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Preference number: 4 (lower is better) Translates to: APQKSKEIKRHVVLNPRLPAAGG*ESAVVR Trigger: ACGAACAACAGCAGATTCTCATCCGCCAGCTGCAGG...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCTGGGCTGCATACTGCTaGAATTGCACGGCAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: APQKSKEIKRHVVLNPRLWAAYC*NCTAVC Trigger: GCAGACTGCCGTGCAATTCCAGCAGTATGCAGCCCA...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CAA 72 bp | CTAGACTGTGACTCCACACTGGGACTGTGGAGTGGTTaGTGCCCTAATAACAACTACAAGGAAATGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LDCDSTLGLWSG*CPNNNYKEMWA Trigger: AGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAGTCCCAGTGTGGAGTCACAGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | CTTGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTGCGTTGAAGTTCTCTTCTTCCTTTTaGAGCCGCTCTCGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LGEVSNCQSTQSKPAALKFSSSF*SRSRSS Trigger: GGAAGAACGAGAGCGGCTGCAAAAGGAAGAAGAGAA...CTTCAACGCAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCAAAGCTGCCATTATCTaGTGCTTTTGCTGTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGKAAII*CFCCSS Trigger: GCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTT...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | GCTGCGTTGAAGGAGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTAATTGCACGGCAGTCTaGGAGTTTAAAGCTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: AALKETSTEASPVTNCGCNCTAV*EFKAAI Trigger: AATGGCAGCTTTAAACTCGCAGACTGCCGTGCAATT...ACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCTCCTTCAACGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCCGTGTCTGGGTTATATaGGCCCAAAAGAACTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGRVWVI*AQKNLL Trigger: AAGCAAGTTCTTTTGGGCCCATATAACCCAGACACG...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCCCATGGCATCCTCCTTaGACATGTTTCCCAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPPWHPP*TCFPEL Trigger: CAGCTCTGGGAAACATGTCCAAGGAGGATGCCATGG...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCATGTTTCCCAGAGCTaGCCATTCTCTCCTCCTATC | + |
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Preference number: 4 (lower is better) Translates to: APQKSKEIKRHVVLNPRLHVSQS*PFSPPI Trigger: GATAGGAGGAGAGAATGGGCAGCTCTGGGAAACATG...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCTGGATACTGCTGGGCTaGATACTGCTGGAATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPWILLG*ILLELH Trigger: GTGCAATTCCAGCAGTATGCAGCCCAGCAGTATCCA...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCTGTAATCACAGAATCTaGATCCTGCCGAATCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGCNHRI*ILPNLL Trigger: GAGAAGATTCGGCAGGATGCAGATTCTGTGATTACA...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | CTGTGGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTGGGCTGTCTCCTCACAAACTCTACCATaGCATCCTCCTTGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: LWSGLCPNNNYKEMWAVSSQTLP*HPPWTC Trigger: ACATGTCCAAGGAGGATGCCATGGTAGAGTTTGTGA...GGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCTGCGTTGAAGGAGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTACTGACAGCAGCATTTaGAGAGTCTGTCCATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: AALKETSTEASPVTNCGCTDSSI*RVCPFK Trigger: TTTGAATGGACAGACTCTCCAAATGCTGCTGTCAGT...ACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCTCCTTCAACGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| 3UTR CAA 72 bp | TCAAACTGTCAAAGCACTCAGTCAAAGCCAGCTGCGTaGAAGGAGACTAGTACAGAAGCTTCCCCAGTTACT | + |
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Preference number: 4 (lower is better) Translates to: SNCQSTQSKPAA*KETSTEASPVT Trigger: AGTAACTGGGGAAGCTTCTGTACTAGTCTCCTTCAACGCAGCTGGCTTTGACTGAGTGCTTTGACAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR GCA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCATACTGGTGGCTGCCTaGATATACTTCCTCGTGACA | + |
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Preference number: 4 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPILVAA*IYFLVT Trigger: TGTCACGAGGAAGTATATGCAGGCAGCCACCAGTAT...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCTTGTTCGTAGTTCCCTaGATACTGCTGGGCTGCATA | + |
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Preference number: 4 (lower is better) Translates to: APQKSKEIKRHVVLNPRLLFVVP*ILLGCI Trigger: TATGCAGCCCAGCAGTATCCAGGGAACTACGAACAA...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCTGGAGCTGCAATCACTaGAAGAGAGTCTTTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPWSCNH*KRVFWS Trigger: GGACCAAAAGACTCTCTTCCAGTGATTGCAGCTCCA...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | AGCTGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTTGAGGTCGGAATTTTCAGTGTaGGTTTTGGCCTGTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: SCTQSKSSLGYSGKIKLRSEFSV*VLACPL Trigger: TAATGGACAGGCCAAAACCCACACTGAAAATTCCGA...CCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS-3UTR CCA 90 bp | GCTGTATCATTTAAGCACGTGCATTTCCAATTCTCTCTAGACTGTGACTCCACATCTTGTCCACATGGATaGAGCTGCAATCACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSFKHVHFQFSLDCDSTSCPHG*SCNHWK Trigger: CTTCCAGTGATTGCAGCTCCATCCATGTGGACAAGA...TGTGGAGTCACAGTCTAGAGAGAATTGGAAATGCACGTGCTTAAATGATACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR TCA 90 bp | GCTGTATCATTTAAGCACGTGCATTTCCAATTCTCTCTAGACTGTGACTCCACAAGGAATTATCAAACTTaGGGAGATAGACTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AVSFKHVHFQFSLDCDSTRNYQT*GDRLPS Trigger: GGAGGGGAGTCTATCTCCTCAAGTTTGATAATTCCT...TGTGGAGTCACAGTCTAGAGAGAATTGGAAATGCACGTGCTTAAATGATACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR GCA 90 bp | AGCTGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTTGAGGAACTTGCTTATGCAGTaGCACGAACTTCAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCTQSKSSLGYSGKIKLRNLLMQ*HELQFF Trigger: GAAAAACTGAAGTTCGTGGCACTGCATAAGCAAGTT...CCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR GCA 90 bp | AGCTGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTTGAGGAAAAGAACTTGCTTATaGAGTGCCACGAACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCTQSKSSLGYSGKIKLRKRTCL*SATNFS Trigger: ACTGAAGTTCGTGGCACTGCATAAGCAAGTTCTTTT...CCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTGGGCTGTCTCCTGTCATAACTGTCTGTaGCAAATTCCCAAAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWSGLCPNNNYKEMWAVSCHNCL*QIPKIG Trigger: ACCTATTTTGGGAATTTGCCACAGACAGTTATGACA...GGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR GCA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCACAGAATCTGCATCCTaGCGAATCTTCTCTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: APQKSKEIKRHVVLNPRLTESAS*RIFSLK Trigger: CTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGT...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CCA 90 bp | GCTGTATCATTTAAGCACGTGCATTTCCAATTCTCTCTAGACTGTGACTCCACATGGAAGAGAGTCTTTTaGTCCATTTTCCAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVSFKHVHFQFSLDCDSTWKRVF*SIFQGF Trigger: GAAGCCTTGGAAAATGGACCAAAAGACTCTCTTCCA...TGTGGAGTCACAGTCTAGAGAGAATTGGAAATGCACGTGCTTAAATGATACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| 3UTR CAA 72 bp | AGTGACAATACACTAGGTGTGTACTGTCTCTGTCATTaGCTATCTACACTACCCTCCCTTCAGATACTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDNTLGVYCLCH*LSTLPSLQILN Trigger: GTTAAGTATCTGAAGGGAGGGTAGTGTAGATAGCAAATGACAGAGACAGTACACACCTAGTGTATTGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| 3UTR CAA 72 bp | AAGATCAAGTTGAGGCCATTTGTTTTTCTACTATACTaGGTGAAGTCTCAAACTGTCAAAGCACTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIKLRPFVFLLY*VKSQTVKALSQ Trigger: TTGACTGAGTGCTTTGACAGTTTGAGACTTCACCAAGTATAGTAGAAAAACAAATGGCCTCAACTTGATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | CTCAGCCGGTCTTCCTCCTCTCGCTTCCGCTTCTCTTCTTCCTTTTaGAGCCGCTCTCGTTCTTCCTCTTCACGCTGCCTTCGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSSSSRFRFSSSF*SRSRSSSSRCLRSS Trigger: GGAGGAGCGAAGGCAGCGTGAAGAGGAAGAACGAGAGCGGCTGCAAAAGGAAGAAGAGAAGCGGAAGCGAGAGGAGGAAGACCGGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | GCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTGGAGACACCATGGCATCCTCCTaGGACATGTTTCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMRPPARSGQRWDVYSGDTMASS*DMFPRA Trigger: AGCTCTGGGAAACATGTCCAAGGAGGATGCCATGGT...GTCTCCAGAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 90 bp | CTCCTGCAGCTGGCGGATGAGAATCTGCTGTTGTTCGTAGTTCCCTaGATACTGCTGGGCTGCATACTGCTGGAATTGCACGGCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLQLADENLLLFVVP*ILLGCILLELHGSL Trigger: CAGACTGCCGTGCAATTCCAGCAGTATGCAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAGATTCTCATCCGCCAGCTGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | TGCACGGCAGTCTGCGAGTTTAAAGCTGCCATTATCTGCTGCTTTTaGTGTTCCAGCCGAAGCCTCTCTTCCTCTATCCGCCGCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTAVCEFKAAIICCF*CSSRSLSSSIRRLS Trigger: AGAGAGGCGGCGGATAGAGGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGACTGCCGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS TCA 90 bp | ACTGCTGCATATACTGCTGATAGTGCTGCTCCTGCAGCTGGCGGATaGGAATCTGCTGTTGTTCGTAGTTCCCTGGATACTGCTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TAAYTADSAAPAAGG*ESAVVRSSLDTAGL Trigger: CAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAGATTCTCATCCGCCAGCTGCAGGAGCAGCACTATCAGCAGTATATGCAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | TGGAATTGCACGGCAGTCTGCGAGTTTAAAGCTGCCATTATCTGCTaGTTTTGCTGTTCCAGCCGAAGCCTCTCTTCCTCTATCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WNCTAVCEFKAAIIC*FCCSSRSLSSSIRR Trigger: GCGGCGGATAGAGGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGACTGCCGTGCAATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | TGCTGGAATTGCACGGCAGTCTGCGAGTTTAAAGCTGCCATTATCTaGTGCTTTTGCTGTTCCAGCCGAAGCCTCTCTTCCTCTATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CWNCTAVCEFKAAII*CFCCSSRSLSSSIR Trigger: GCGGATAGAGGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGACTGCCGTGCAATTCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS TCA 90 bp | AGTAGACGGACTTGGACCTCCACAGAGAGTAGGAATTATCAAACTTaGGGAGATAGACTCCCCTCCCTGGATACTGGTGGCTGCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRRTWTSTESRNYQT*GDRLPSLDTGGCLH Trigger: ATGCAGGCAGCCACCAGTATCCAGGGAGGGGAGTCTATCTCCTCAAGTTTGATAATTCCTACTCTCTGTGGAGGTCCAAGTCCGTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | TTCTCTTCTTCCTTTTGCAGCCGCTCTCGTTCTTCCTCTTCACGCTaGCTTCGCTCCTCCTCCGCCTTTCTTCTTTTCTCTTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSFCSRSRSSSSR*LRSSSAFLLFSSSS Trigger: GGAAGAAGAAGAGAAAAGAAGAAAGGCGGAGGAGGAGCGAAGGCAGCGTGAAGAGGAAGAACGAGAGCGGCTGCAAAAGGAAGAAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCTGCATACTGCTGGAATaGCACGGCAGTCTGCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGCILLE*HGSLRV Trigger: AACTCGCAGACTGCCGTGCAATTCCAGCAGTATGCA...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCCTTCTCTTCTTCCTTTaGCAGCCGCTCTCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGLLFFL*QPLSFF Trigger: GAAGAACGAGAGCGGCTGCAAAAGGAAGAAGAGAAG...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | ACAGACAGCAATGCGCCCTCCAGCCAGGTCAGGGCAACGCTGGGACGTTTATTCTTTAAAGTCTTTGATTaGTGGTCTTGTCCACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDSNAPSSQVRATLGRLFFKVFD*WSCPHG Trigger: TCCATGTGGACAAGACCACAAATCAAAGACTTTAAA...GAATAAACGTCCCAGCGTTGCCCTGACCTGGCTGGAGGGCGCATTGCTGTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AGCTGTACCCAAAGCAAAAGCAGCCTTGGTTACTCAGGTAAGATCAAGTTGAGGTGGGCCCAAAAGAACTaGCTTATGCAGTGCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCTQSKSSLGYSGKIKLRWAQKN*LMQCHE Trigger: TTCGTGGCACTGCATAAGCAAGTTCTTTTGGGCCCA...CCTCAACTTGATCTTACCTGAGTAACCAAGGCTGCTTTTGCTTTGGGTACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 90 bp | CAACACATCAAAGAATCCAACCTCAGGGGACGTGTCTGGGTTATATaGGCCCAAAAGAACTTGCTTATGCAGTGCCACGAACTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHIKESNLRGRVWVI*AQKNLLMQCHELQF Trigger: AAACTGAAGTTCGTGGCACTGCATAAGCAAGTTCTTTTGGGCCCATATAACCCAGACACGTCCCCTGAGGTTGGATTCTTTGATGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCCATTATCTGCTGCTTTaGCTGTTCCAGCCGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPHYLLL*LFQPKP Trigger: AGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATG...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | GCGCCACAAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCTGACAGTGTATCACTaGCTCCAGCTGTGTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: APQKSKEIKRHVVLNPRLLTVYH*LQLCSP Trigger: AGGTGAACACAGCTGGAGCAAGTGATACACTGTCAG...GAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTTGTGGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGGAGTGGTTTGTGCCCTAATAACAACTACAAGGAAATGTGGGCTGTCTCCTTTTCAGTGTGGGTTTaGGCCTGTCCATTAACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LWSGLCPNNNYKEMWAVSFSVWV*ACPLTD Trigger: GTCAGTTAATGGACAGGCCAAAACCCACACTGAAAA...GGAGACAGCCCACATTTCCTTGTAGTTGTTATTAGGGCACAAACCACTCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | TCGGACGGTGACGACTTCTCCTCGACGTACTGTAATCACAGAATCTaGATCCTGCCGAATCTTCTCTTTAAAGTCTTTGATTTGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDGDDFSSTYCNHRI*ILPNLLFKVFDLWS Trigger: AGACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGTGATTACAGTACGTCGAGGAGAAGTCGTCACCGTCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 90 bp | GTGACGACTTCTCCTCGACGTACTGTAATCACAGAATCTGCATCCTaGCGAATCTTCTCTTTAAAGTCTTTGATTTGTGGTCTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VTTSPRRTVITESAS*RIFSLKSLICGLVH Trigger: GTGGACAAGACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGTGATTACAGTACGTCGAGGAGAAGTCGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 90 bp | TCCTCCGCCTTTCTTCTTTTCTCTTCTTCTTCCTTCTCTATTCTGTaGGACGCAACATATGCCGAGAGGAGAGGACAACACTTATTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSAFLLFSSSSFSIL*DATYAERRGQHLFR Trigger: TCTAAATAAGTGTTGTCCTCTCCTCTCGGCATATGTTGCGTCCCACAGAATAGAGAAGGAAGAAGAAGAGAAAAGAAGAAAGGCGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 90 bp | AGAATCTGCATCCTGCCGAATCTTCTCTTTAAAGTCTTTGATTTGTaGTCTTGTCCACATGGATGGAGCTGCAATCACTGGAAGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RICILPNLLFKVFDL*SCPHGWSCNHWKRV Trigger: GACTCTCTTCCAGTGATTGCAGCTCCATCCATGTGGACAAGACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCAAAGGAAATTAAACGTCATGTTGTGCTCAACCCTAGACTCCCGACCCGATGAGAATCTGCTGTaGTTCGTAGTTCCCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KSQRKLNVMLCSTLDSRPDENLL*FVVPWI Trigger: TATCCAGGGAACTACGAACAACAGCAGATTCTCATC...GGGTCGGGAGTCTAGGGTTGAGCACAACATGACGTTTAATTTCCTTTGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS-3UTR CAA 90 bp | AGACTAGTACAGAAGCTTCCCCAGTTACTAACTGTGGCTGTGCACAACACAGGCTTCTCTTTAAAGTCTTaGATTTGTGGTCTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLVQKLPQLLTVAVHNTGFSLKS*ICGLVH Trigger: GTGGACAAGACCACAAATCAAAGACTTTAAAGAGAA...GCCTGTGTTGTGCACAGCCACAGTTAGTAACTGGGGAAGCTTCTGTACTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 90 bp | AATCTTCTCTTTAAAGTCTTTGATTTGTGGTCTTGTCCACATGGATaGAGCTGCAATCACTGGAAGAGAGTCTTTTGGTCCATTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NLLFKVFDLWSCPHG*SCNHWKRVFWSIFQ Trigger: TTGGAAAATGGACCAAAAGACTCTCTTCCAGTGATTGCAGCTCCATCCATGTGGACAAGACCACAAATCAAAGACTTTAAAGAGAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS TCA 72 bp | CCGCGCCGGGCCTCTCCTCCGAGTCCGGGCTCAGCGTaGGACCGTCGAGCGACACCTCGAGCTGCTCTACGT | + |
|
Preference number: 6 (lower is better) Translates to: PRRASPPSPGSA*DRRATPRAALR Trigger: ACGTAGAGCAGCTCGAGGTGTCGCTCGACGGTCTCACGCTGAGCCCGGACTCGGAGGAGAGGCCCGGCGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CAA 90 bp | TCTCAGCCGGTCTTCCTCCTCTCGCTTCCGCTTCTCTTCTTCCTTTaGCAGCCGCTCTCGTTCTTCCTCTTCACGCTGCCTTCGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQPVFLLSLPLLFFL*QPLSFFLFTLPSLL Trigger: GAGGAGCGAAGGCAGCGTGAAGAGGAAGAACGAGAGCGGCTGCAAAAGGAAGAAGAGAAGCGGAAGCGAGAGGAGGAAGACCGGCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CAA 72 bp | GTGCTGCTCCTGCAGCTGGCGGATGAGAATCTGCTGTaGTTCGTAGTTCCCTGGATACTGCTGGGCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: VLLLQLADENLL*FVVPWILLGCI Trigger: TATGCAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAGATTCTCATCCGCCAGCTGCAGGAGCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CAA 90 bp | CTGCTGATAGTGCTGCTCCTGCAGCTGGCGGATGAGAATCTGCTGTaGTTCGTAGTTCCCTGGATACTGCTGGGCTGCATACTGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLIVLLLQLADENLL*FVVPWILLGCILLE Trigger: TTCCAGCAGTATGCAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAGATTCTCATCCGCCAGCTGCAGGAGCAGCACTATCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | CTGCTGTTGTTCGTAGTTCCCTGGATACTGCTGGGCTaGATACTGCTGGAATTGCACGGCAGTCTGCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLFVVPWILLG*ILLELHGSLRV Trigger: AACTCGCAGACTGCCGTGCAATTCCAGCAGTATGCAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | TGCACGGCAGTCTGCGAGTTTAAAGCTGCCATTATCTaGTGCTTTTGCTGTTCCAGCCGAAGCCTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTAVCEFKAAII*CFCCSSRSLSS Trigger: GGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGACTGCCGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 72 bp | CTGGCGGATGAGAATCTGCTGTTGTTCGTAGTTCCCTaGATACTGCTGGGCTGCATACTGCTGGAATTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LADENLLLFVVP*ILLGCILLELH Trigger: GTGCAATTCCAGCAGTATGCAGCCCAGCAGTATCCAGGGAACTACGAACAACAGCAGATTCTCATCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | TACCATGGCATCCTCCTTGGACATGTTTCCCAGAGCTaGCCATTCTCTCCTCCTATCATTCCCCAACACATC | + |
|
Preference number: 6 (lower is better) Translates to: YHGILLGHVSQS*PFSPPIIPQHI Trigger: GATGTGTTGGGGAATGATAGGAGGAGAGAATGGGCAGCTCTGGGAAACATGTCCAAGGAGGATGCCATGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | GTCTGCGAGTTTAAAGCTGCCATTATCTGCTGCTTTTaGTGTTCCAGCCGAAGCCTCTCTTCCTCTATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VCEFKAAIICCF*CSSRSLSSSIR Trigger: GCGGATAGAGGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | ACGGCAGTCTGCGAGTTTAAAGCTGCCATTATCTGCTaGTTTTGCTGTTCCAGCCGAAGCCTCTCTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TAVCEFKAAIIC*FCCSSRSLSSS Trigger: AGAGGAAGAGAGGCTTCGGCTGGAACAGCAAAAGCAGCAGATAATGGCAGCTTTAAACTCGCAGACTGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | TTCCCTGGATACTGCTGGGCTGCATACTGCTGGAATTaGACGGCAGTCTGCGAGTTTAAAGCTGCCATTATC | + |
|
Preference number: 6 (lower is better) Translates to: FPGYCWAAYCWN*TAVCEFKAAII Trigger: GATAATGGCAGCTTTAAACTCGCAGACTGCCGTGCAATTCCAGCAGTATGCAGCCCAGCAGTATCCAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS GCA 72 bp | GATGCAGGCAATGATGCCCCAGCCATCACTACTTCTTaGTGTTTCTGTAATGCTGCCTGTTGTTGTGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: DAGNDAPAITTS*CFCNAACCCAS Trigger: GCTTGCACAACAACAGGCAGCATTACAGAAACAGCAAGAAGTAGTGATGGCTGGGGCATCATTGCCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CAA 72 bp | CTGACAGTGTATCACTTGCTCCAGCTGTGTTCACCTTaGATGATGCAGGCAATGATGCCCCAGCCATCACTA | + |
|
Preference number: 6 (lower is better) Translates to: LTVYHLLQLCSP*MMQAMMPQPSL Trigger: TAGTGATGGCTGGGGCATCATTGCCTGCATCATCAAAGGTGAACACAGCTGGAGCAAGTGATACACTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 72 bp | AAAGAATCCAACCTCAGGGGACGTGTCTGGGTTATATaGGCCCAAAAGAACTTGCTTATGCAGTGCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: KESNLRGRVWVI*AQKNLLMQCHE Trigger: TTCGTGGCACTGCATAAGCAAGTTCTTTTGGGCCCATATAACCCAGACACGTCCCCTGAGGTTGGATTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
||
| CDS CCA 72 bp | CAACACATCAAAGAATCCAACCTCAGGGGACGTGTCTaGGTTATATGGGCCCAAAAGAACTTGCTTATGCAG | + |
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Preference number: 6 (lower is better) Translates to: QHIKESNLRGRV*VIWAQKNLLMQ Trigger: CTGCATAAGCAAGTTCTTTTGGGCCCATATAACCCAGACACGTCCCCTGAGGTTGGATTCTTTGATGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS CAA 90 bp | CACAGAATCTGCATCCTGCCGAATCTTCTCTTTAAAGTCTTTGATTaGTGGTCTTGTCCACATGGATGGAGCTGCAATCACTGGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HRICILPNLLFKVFD*WSCPHGWSCNHWKR Trigger: TCTCTTCCAGTGATTGCAGCTCCATCCATGTGGACAAGACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS CCA 72 bp | TTTCTTCTTTTCTCTTCTTCTTCCTTCTCTATTCTGTaGGACGCAACATATGCCGAGAGGAGAGGACAACAC | + |
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Preference number: 6 (lower is better) Translates to: FLLFSSSSFSIL*DATYAERRGQH Trigger: GTGTTGTCCTCTCCTCTCGGCATATGTTGCGTCCCACAGAATAGAGAAGGAAGAAGAAGAGAAAAGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS CAA 72 bp | TGCATCCTGCCGAATCTTCTCTTTAAAGTCTTTGATTaGTGGTCTTGTCCACATGGATGGAGCTGCAATCAC | + |
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Preference number: 6 (lower is better) Translates to: CILPNLLFKVFD*WSCPHGWSCNH Trigger: GTGATTGCAGCTCCATCCATGTGGACAAGACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS GCA 72 bp | GACGACTTCTCCTCGACGTACTGTAATCACAGAATCTaGATCCTGCCGAATCTTCTCTTTAAAGTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: DDFSSTYCNHRI*ILPNLLFKVFD Trigger: ATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGTGATTACAGTACGTCGAGGAGAAGTCGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS GCA 72 bp | TGGGTTATATGGGCCCAAAAGAACTTGCTTATGCAGTaGCACGAACTTCAGTTTTTCTTCATAAGTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: WVIWAQKNLLMQ*HELQFFFISWM Trigger: CATCCAACTTATGAAGAAAAACTGAAGTTCGTGGCACTGCATAAGCAAGTTCTTTTGGGCCCATATAACCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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| CDS GCA 72 bp | TCTCCTCGACGTACTGTAATCACAGAATCTGCATCCTaGCGAATCTTCTCTTTAAAGTCTTTGATTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SPRRTVITESAS*RIFSLKSLICG Trigger: ACCACAAATCAAAGACTTTAAAGAGAAGATTCGGCAGGATGCAGATTCTGTGATTACAGTACGTCGAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027780.6 |
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