Pregenerated sensors for ACAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032047Ensembl transcript IDs: ENSMUST00000034547.6
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGTGCAGTGCAGTGTCCAAGTCCTCCCTGCTGTGTCACCCAGTGTaGGTCCTGGGAACCAAATGTTTTCTGTGTGAGCAACAGATGCTC | + |
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Preference number: 1 (lower is better) Translates to: ACSAVSKSSLLCHPV*VLGTKCFLCEQQML Trigger: GAGCATCTGTTGCTCACACAGAAAACATTTGGTTCCCAGGACCCACACTGGGTGACACAGCAGGGAGGACTTGGACACTGCACTGCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 90 bp | TCTAAACATCCCAAGTCCTCTGCGGGCCTGGGTCTTGTCTCAGCATaGGCATCTGTCTCGCTGACATCACTTTGCCAATCAGCCCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SKHPKSSAGLGLVSA*ASVSLTSLCQSARV Trigger: GACTCGGGCTGATTGGCAAAGTGATGTCAGCGAGACAGATGCTCATGCTGAGACAAGACCCAGGCCCGCAGAGGACTTGGGATGTTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CCA 90 bp | TGTACCGGCAGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTaGTTTCTGCGTGCAGTGCAGTGTCCAAGTCCTCCCTGCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: CTGSSEVEKHRTSFL*FLRAVQCPSPPCCV Trigger: GACACAGCAGGGAGGACTTGGACACTGCACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCTGCCGGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CCA 90 bp | GTGCAGTGTCCAAGTCCTCCCTGCTGTGTCACCCAGTGTGGGTCCTaGGAACCAAATGTTTTCTGTGTGAGCAACAGATGCTCTTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: VQCPSPPCCVTQCGS*EPNVFCVSNRCSFV Trigger: AACAAAAGAGCATCTGTTGCTCACACAGAAAACATTTGGTTCCCAGGACCCACACTGGGTGACACAGCAGGGAGGACTTGGACACTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR GCA 90 bp | GTAGCTCTGTGGACCAGGCTAGCCTTAAACTCAGAAAGATCCACTTaGCTCTATCTCCAAGTGCTGGGATTAAAGCCATGTACCACCCAA | + |
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Preference number: 1 (lower is better) Translates to: VALWTRLALNSERST*LYLQVLGLKPCTTQ Trigger: TTGGGTGGTACATGGCTTTAATCCCAGCACTTGGAGATAGAGGCAAGTGGATCTTTCTGAGTTTAAGGCTAGCCTGGTCCACAGAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CCA 90 bp | CGGACAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTaGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATG | + |
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Preference number: 1 (lower is better) Translates to: RTKLHLLDFVLLEST*LPILPLLVYESLPM Trigger: CATTGGCAAAGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGTCCAAGTCCTCCCTaGTGTGTCACCCAGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: QSYTYLILCYLRARGFPFCPSPP*CVTQCG Trigger: CCCACACTGGGTGACACAGCAGGGAGGACTTGGACA...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCTGTACCGGCAGCAGTaGGGTAGAAAAGCACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: KLHLLDFVLLESTWLPILLYRQQ*GRKAQD Trigger: GTCCTGTGCTTTTCTACCTCACTGCTGCCGGTACAG...CAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTAGACTCGGATCCTCCTaGCTCTTCCTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVRLGSS*LFLPSA Trigger: AGCACTTGGGAGGAAGAGGCAGGAGGATCCGAGTCT...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | ACACCAAGCTGGCTATGTAGACTCGGATCCTCCTGCCTCTTCCTCCCAAGTGCTAGCCCATTAAAAGTTTaGGCTGAGGATATTTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: TPSWLCRLGSSCLFLPSASPLKV*AEDIFS Trigger: TGAGAAAATATCCTCAGCCCAAACTTTTAATGGGCT...AGCACTTGGGAGGAAGAGGCAGGAGGATCCGAGTCTACATAGCCAGCTTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CAA 90 bp | GCTTCAAACCTAGCTTTTATAACTGACGGACAAAGCTACACCTACTaGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ASNLAFITDGQSYTY*ILCYLRARGFPFCH Trigger: GTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTGTCCGTCAGTTATAAAAGCTAGGTTTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACTGCTCTGTTTTGTTTaGAGGACTCCTTTAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VGNTSEDSRPTSVAQLGILLCFV*RTPLKS Trigger: GCTCTTTAAAGGAGTCCTGCAAACAAAACAGAGCAG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGTGGGATTTAAAGGCATaGACACCCAGTGGATCATGT | + |
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Preference number: 2 (lower is better) Translates to: KLHLLDFVLLESTWLPILWDLKA*TPSGSC Trigger: ACATGATCCACTGGGTGTGCATGCCTTTAAATCCCA...CAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCACCCAGTGTGGGTCCTaGGAACCAAATGTTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCTQCGS*EPNVFC Trigger: ACAGAAAACATTTGGTTCCCAGGACCCACACTGGGT...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTGATTATTTTGGGGCTTaGGAGAGTCAAGGAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVDYFGA*ESQGTL Trigger: CAAAGTTCCTTGACTCTCCCAAGCCCCAAAATAATC...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCCAAATGTTTTCTGTGTaGGCAACAGATGCTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSYTYLILCYLRARGFPFQMFSV*ATDALL Trigger: CAAAAGAGCATCTGTTGCTCACACAGAAAACATTTG...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAACTTCAGCCGGTCACATaGAACTGTCTCCTAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: ILPLLVYESLPMRSLVRQLQPVT*NCLLKQ Trigger: CTGTTTTAGGAGACAGTTCCATGTGACCGGCTGAAG...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACAGAATAGAAGTCCATaGATGTTAGATTATTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIQNRSP*MLDYFG Trigger: CCCAAAATAATCTAACATCCATGGACTTCTATTCTG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CAA 90 bp | CTCTGTTTTGTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTaGGTGGACATAGATTGCTATAACTTGTGCTCACTTGGAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: LCFVCRTPLKSFYVG*VDIDCYNLCSLGRL Trigger: AAGTCTTCCAAGTGAGCACAAGTTATAGCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAACAAAACAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | CACCCATTTTTAATGATGGTTCTTGAACGCTTTAACATCCCTTTTGGCCCACCTGTCAAGGAACTTTGTTaGTGCTATTGTGATATTCTC | + |
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Preference number: 2 (lower is better) Translates to: HPFLMMVLERFNIPFGPPVKELC*CYCDIL Trigger: GAGAATATCACAATAGCAGCAACAAAGTTCCTTGAC...AGGTGGGCCAAAAGGGATGTTAAAGCGTTCAAGAACCATCATTAAAAATGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAAGATGTTAGATTATTTTaGGGCTTGGGAGAGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ILPLLVYESLPMRSLVRQDVRLF*GLGESR Trigger: CCTTGACTCTCCCAAGCCCCAAAATAATCTAACATC...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAAGATTGCTATAACTTGTaGTCACTTGGAAGACTTAAC | + |
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Preference number: 2 (lower is better) Translates to: ILPLLVYESLPMRSLVRQDCYNL*SLGRLN Trigger: GTTAAGTCTTCCAAGTGAGCACAAGTTATAGCAATC...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 72 bp | CCCAAGTCCTCTGCGGGCCTGGGTCTTGTCTCAGCATaGGCATCTGTCTCGCTGACATCACTTTGCCAATCA | + |
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Preference number: 3 (lower is better) Translates to: PKSSAGLGLVSA*ASVSLTSLCQS Trigger: TGATTGGCAAAGTGATGTCAGCGAGACAGATGCTCATGCTGAGACAAGACCCAGGCCCGCAGAGGACTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 72 bp | GGCCCACCTCCCACTAGAGGTAGTGGGAAATACCAGTaGAGACTCCAGACCCACAAGTGTTGCACAGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: GPPPTRGSGKYQ*RLQTHKCCTAR Trigger: CCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCACTACCTCTAGTGGGAGGTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CCA 72 bp | GCAGTGTCCAAGTCCTCCCTGCTGTGTCACCCAGTGTaGGTCCTGGGAACCAAATGTTTTCTGTGTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AVSKSSLLCHPV*VLGTKCFLCEQ Trigger: TTGCTCACACAGAAAACATTTGGTTCCCAGGACCCACACTGGGTGACACAGCAGGGAGGACTTGGACACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR GCA 72 bp | AGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTaGAGTGCAGTGTCCAAGTCCTCCCTGCTGTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RKAQDLISLVSA*SAVSKSSLLCH Trigger: GTGACACAGCAGGGAGGACTTGGACACTGCACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CCA 72 bp | TCATTCTATAGCTCTTCTGGTTTACTGAGTTGGGCATaGTCTGTCTCTCTCCTGGCTCTCAGTTCCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SFYSSSGLLSWA*SVSLLALSSSP Trigger: AGGAGAGGAACTGAGAGCCAGGAGAGAGACAGACCATGCCCAACTCAGTAAACCAGAAGAGCTATAGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | ACACCAAGCTGGCTATGTAGACTCGGATCCTCCTGCCTCTTCCTCCCAAGTGCTTGCTCTTTTGTTCGTTaGTTTGTTTCCAGAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: TPSWLCRLGSSCLFLPSACSFVR*FVSRVS Trigger: AGAAACTCTGGAAACAAACAAACGAACAAAAGAGCA...AGCACTTGGGAGGAAGAGGCAGGAGGATCCGAGTCTACATAGCCAGCTTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 72 bp | TTCTTCCTTCCTCATTCTATAGCTCTTCTGGTTTACTaGGTTGGGCATGGTCTGTCTCTCTCCTGGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: FFLPHSIALLVY*VGHGLSLSWLS Trigger: TGAGAGCCAGGAGAGAGACAGACCATGCCCAACTCAGTAAACCAGAAGAGCTATAGAATGAGGAAGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR GCA 72 bp | TGGACCAGGCTAGCCTTAAACTCAGAAAGATCCACTTaGCTCTATCTCCAAGTGCTGGGATTAAAGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: WTRLALNSERST*LYLQVLGLKPC Trigger: ACATGGCTTTAATCCCAGCACTTGGAGATAGAGGCAAGTGGATCTTTCTGAGTTTAAGGCTAGCCTGGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCCTCAGAAAGATCCACTaGCCTCTATCTCCAAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCLRKIH*PLSPSA Trigger: AGCACTTGGAGATAGAGGCAAGTGGATCTTTCTGAG...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTCCTGCTCTGTTTTGTTaGCAGGACTCCTTTAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVPALFC*QDSFKE Trigger: CTCTTTAAAGGAGTCCTGCAAACAAAACAGAGCAGG...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | GTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTCTTCTATGTGTATTCTaGGCTGTCATAGAAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: VLLESTWLPILPLLVYESLLCVF*AVIEVA Trigger: AGCTACTTCTATGACAGCCAAGAATACACATAGAAG...AGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 72 bp | GAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATaGGTCTTTGCCAATGAGGTCTCTTGTAAGACAATA | + |
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Preference number: 3 (lower is better) Translates to: EHVASHSATFSL*VFANEVSCKTI Trigger: TATTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR TCA 72 bp | CTGAGCTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTaGTTGTTCCCTTCATTGATGTTTAGTGACATTCTT | + |
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Preference number: 3 (lower is better) Translates to: LSYLPSPLLSSW*LFPSLMFSDIL Trigger: AAGAATGTCACTAAACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAGCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCAGAATAGAAGTCCATGGATGTTAGATTATTTTGGGGCTTGGGAGAGTCAAGCAACAGATGCTCTTTaGTTCGTTTGTTTGTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: WQNRSPWMLDYFGAWESQATDAL*FVCLFP Trigger: TGGAAACAAACAAACGAACAAAAGAGCATCTGTTGC...TTGACTCTCCCAAGCCCCAAAATAATCTAACATCCATGGACTTCTATTCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR-3UTR CAA 90 bp | CACCCATTTTTAATGATGGTTCTTGAACGCTTTAACATCCCTTTTGGCCCACCTATAGATTGCTATAACTaGTGCTCACTTGGAAGACTT | + |
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Preference number: 3 (lower is better) Translates to: HPFLMMVLERFNIPFGPPIDCYN*CSLGRL Trigger: AAGTCTTCCAAGTGAGCACAAGTTATAGCAATCTAT...AGGTGGGCCAAAAGGGATGTTAAAGCGTTCAAGAACCATCATTAAAAATGGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR GCA 72 bp | ATTTTGGGGCTTGGGAGAGTCAAGGAACTTTGTTGCTaGTATTGTGATATTCTCATTTCTTTGGTGTATTTA | + |
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Preference number: 3 (lower is better) Translates to: ILGLGRVKELCC*YCDILISLVYL Trigger: TAAATACACCAAAGAAATGAGAATATCACAATAGCAGCAACAAAGTTCCTTGACTCTCCCAAGCCCCAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR TCA 90 bp | TGGTTTCTGCGTGCAGTGCAGTGTCCAAGTCCTCCCTGCTGTGTCACCCAGTGTAGTTTAGTGGCCGGCTaGGAGGCAAGGCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WFLRAVQCPSPPCCVTQCSLVAG*EARLPR Trigger: CCTGGGCAGCCTTGCCTCTCAGCCGGCCACTAAACT...ACACTGGGTGACACAGCAGGGAGGACTTGGACACTGCACTGCACGCAGAAACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | GTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTCTGCGGACGACGCCGTaGAGAGCCACCAGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLLESTWLPILPLLVYESLRTTP*RATRAA Trigger: GGCTGCCCTGGTGGCTCTGCACGGCGTCGTCCGCAG...AGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | TGGTTTCTGCGTGCAGTGCAGTGTCCAAGTCCTCCCTGCTGTGTCACCCAGTGTGCTCTCCATCCCGCCTaGCACCATCACATCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: WFLRAVQCPSPPCCVTQCALHPA*HHHILM Trigger: CATCAGGATGTGATGGTGGCAGGCGGGATGGAGAGC...ACACTGGGTGACACAGCAGGGAGGACTTGGACACTGCACTGCACGCAGAAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | GTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTATGGGACATTGGACATaGTCTCCATCCCGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLLESTWLPILPLLVYESMGHWT*SPSRLP Trigger: TGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCAT...AGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR CCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACAGACCGAACTCTCCTaGCTTCAGGGCATGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIQTELS*LQGMSH Trigger: ATGGCTCATGCCCTGAAGCCAGGAGAGTTCGGTCTG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR TCA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCCTGCCTCTGCAGTCATaGGAACCAGAGCAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCLPLQS*EPEQLL Trigger: GAGCAGCTGCTCTGGTTCTCATGACTGCAGAGGCAG...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGGGCAGCATCAGCAAATaGTGCAATTCGTGCCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVGSISK*CNSCQW Trigger: CCATTGGCACGAATTGCAGCATTTGCTGATGCTGCC...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACTCCATCGTTCAGTGTaGTGGCATTGGCAGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGILHRSV*WHWQLL Trigger: TAACAGCTGCCAATGCCAGCACACTGAACGATGGAG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGAATAGAAGTCCATGGATGTTAGATTATTTTGGGGCTTGGGAGAGTCAACCTCTGGGCTGCCTCTaGAGTCATGAGAACCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WQNRSPWMLDYFGAWESQPLGCL*SHENQS Trigger: GCTCTGGTTCTCATGACTGCAGAGGCAGCCCAGAGG...TTGACTCTCCCAAGCCCCAAAATAATCTAACATCCATGGACTTCTATTCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| 3UTR CAA 72 bp | GTGGACCAGGCTAGCCTTAAACTCAGAAAGATCCACTaGCCTCTATCTCCAAGTGCTGGGATTAAAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VDQASLKLRKIH*PLSPSAGIKAM Trigger: CATGGCTTTAATCCCAGCACTTGGAGATAGAGGCAAGTGGATCTTTCTGAGTTTAAGGCTAGCCTGGTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACCACACATAAGACTTTaGGAGGCCATCATGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIPHIRL*EAIMMA Trigger: AGCCATCATGATGGCCTCTCAAAGTCTTATGTGTGG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGCTAGCACAACCACACTaGATGCTTCATTTACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVLAQPH*MLHLLP Trigger: GGGAAGTAAATGAAGCATTCAGTGTGGTTGTGCTAG...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTTTAACATTGAGCCTCTaGGCTGCCTCTGCAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVLTLSL*AASAVM Trigger: CATGACTGCAGAGGCAGCCCAGAGGCTCAATGTTAA...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAAGCTGAGAGGCAAGGCTaGCCAGGAAGGATCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPLLVYESLPMRSLVRQAERQG*PGRIQW Trigger: CCATTGGATCCTTCCTGGGCAGCCTTGCCTCTCAGC...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCGACATCCCAATTGGATaGCCCAGAGAAACAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCDIPIG*PRETAP Trigger: AGGAGCTGTTTCTCTGGGCCATCCAATTGGGATGTC...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR TCA 90 bp | CAGAATAGAAGTCCATGGATGTTAGATTATTTTGGGGCTTGGGAGAGTCAAGGACTTCACCCCCTTGGATaGCATTGCCCATGTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QNRSPWMLDYFGAWESQGLHPLG*HCPCRL Trigger: AAGTCTACATGGGCAATGTCATCCAAGGGGGTGAAG...TCCTTGACTCTCCCAAGCCCCAAAATAATCTAACATCCATGGACTTCTATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTTTGAGAGGCCATCATaGTGGCTTTCATTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSYTYLILCYLRARGFPFFERPS*WLSFLK Trigger: CTTCAGGAATGAAAGCCATCATGATGGCCTCTCAAA...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATATACGTATCCTGTTCCTaGCGTGAGATATTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIYVSCS*REIFIF Trigger: GAAGATGAATATCTCACGGCAGGAACAGGATACGTA...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGCACAACCACACTGAATaGTTCATTTACTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVHNHTE*FIYFPH Trigger: ATGTGGGAAGTAAATGAAGCATTCAGTGTGGTTGTG...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CACCCATTTTTAATGATGGTTCTTGAACGCTTTAACATCCCTTTTGGCCCACCTTTACGTATGGGACATTaGACATGCTCTCCATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HPFLMMVLERFNIPFGPPLRMGH*TCSPSR Trigger: GCGGGATGGAGAGCATGTCCAATGTCCCATACGTAA...AGGTGGGCCAAAAGGGATGTTAAAGCGTTCAAGAACCATCATTAAAAATGGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGTTTTACCCCACCATATaGTGTTGCTCCTCTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLHLLDFVLLESTWLPILFYPTI*CCSSAH Trigger: ATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAA...CAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATACACGGTCTTGAGCTTTaGCACTTTACTAAAGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIHGLEL*HFTKVN Trigger: GTTGACTTTAGTAAAGTGCCAAAGCTCAAGACCGTG...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | AGATGTAAAAATGCTGGAACTTTACCCTGCCTTCATCAGGAGAGAACCCGGTTACATCGTTCAGTGTGCTaGCATTGGCAGCTGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: RCKNAGTLPCLHQERTRLHRSVC*HWQLLL Trigger: CAATAACAGCTGCCAATGCCAGCACACTGAACGATG...TAACCGGGTTCTCTCCTGATGAAGGCAGGGTAAAGTTCCAGCATTTTTACATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCCAAGTGGAAAATCAATaGGGTCTACGGCAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCQVENQ*GLRQHQ Trigger: CTGATGCTGCCGTAGACCCCATTGATTTTCCACTTG...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | CACCCATTTTTAATGATGGTTCTTGAACGCTTTAACATCCCTTTTGGCCCACCTCCCACCATATGGTGTTaGTCCTCTGCTCATTACGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPFLMMVLERFNIPFGPPPTIWC*SSAHYV Trigger: TACGTAATGAGCAGAGGAGCAACACCATATGGTGGG...AGGTGGGCCAAAAGGGATGTTAAAGCGTTCAAGAACCATCATTAAAAATGGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATATGGCAGCTGTTATTGTaGCATTTTCTTTCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIWQLLL*HFLSGT Trigger: TGTTCCAGAAAGAAAATGGCACAATAACAGCTGCCA...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| 3UTR CAA 72 bp | TTTATAACTGACGGACAAAGCTACACCTACTTGATTTaGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FITDGQSYTYLI*CYLRARGFPFC Trigger: GCAGAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTGTCCGTCAGTTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTCATTCAAAGTGGGTTTaGATGCATAACTTCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVHSKWV*MHNFVP Trigger: TGGAACGAAGTTATGCATCCAAACCCACTTTGAATG...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CACCCATTTTTAATGATGGTTCTTGAACGCTTTAACATCCCTTTTGGCCCACCTTGCAATTCGTGCCAATaGCTTAACATTGAGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPFLMMVLERFNIPFGPPCNSCQ*LNIEPL Trigger: CAGAGGCTCAATGTTAAGCCATTGGCACGAATTGCA...AGGTGGGCCAAAAGGGATGTTAAAGCGTTCAAGAACCATCATTAAAAATGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CAGAATAGAAGTCCATGGATGTTAGATTATTTTGGGGCTTGGGAGAGTCAAGGAGAAACAGCTCCTCCGTaGATATTTACTTTTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNRSPWMLDYFGAWESQGETAPP*IFTFWG Trigger: CCCCCAAAAAGTAAATATCCACGGAGGAGCTGTTTC...TCCTTGACTCTCCCAAGCCCCAAAATAATCTAACATCCATGGACTTCTATTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | GTGGGAAATACCAGTGAAGACTCCAGACCCACAAGTGTTGCACAGCTAGGTATAGATATTCATCTTCTTTaGAGTATTCTCAGCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGNTSEDSRPTSVAQLGIDIHLL*SILSTV Trigger: AACTGTGCTGAGAATACTGCAAAGAAGATGAATATC...TATACCTAGCTGTGCAACACTTGTGGGTCTGGAGTCTTCACTGGTATTTCCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR GCA 90 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTTGGTGGACATAGATTGCAAATGCTGCAATTCGTaGCAATGGCTTAACATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCRTPLKSFYVGLVDIDCKCCNS*QWLNIE Trigger: CTCAATGTTAAGCCATTGGCACGAATTGCAGCATTT...GCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | AGATGTAAAAATGCTGGAACTTTACCCTGCCTTCATCAGGAGAGAACCCGGTTACCACTTCATTCAAAGTaGGTTTGGATGCATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCKNAGTLPCLHQERTRLPLHSK*VWMHNF Trigger: GAAGTTATGCATCCAAACCCACTTTGAATGAAGTGG...TAACCGGGTTCTCTCCTGATGAAGGCAGGGTAAAGTTCCAGCATTTTTACATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTGGATATTTACTTTTTaGGGGTCAATCTCCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QSYTYLILCYLRARGFPFWIFTF*GSISSI Trigger: AATGCTGGAGATTGACCCCCAAAAAGTAAATATCCA...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| 3UTR CAA 72 bp | GTTTGCAGGACTCCTTTAAAGAGCTTCTATGTTGGCTaGGTGGACATAGATTGCTATAACTTGTGCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VCRTPLKSFYVG*VDIDCYNLCSL Trigger: AAGTGAGCACAAGTTATAGCAATCTATGTCCACCAAGCCAACATAGAAGCTCTTTAAAGGAGTCCTGCAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAATCTGCTCATTACGTATaGGACATTGGACATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILPLLVYESLPMRSLVRQSAHYV*DIGHAL Trigger: GAGAGCATGTCCAATGTCCCATACGTAATGAGCAGA...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAAGTGCCATTTTCTTTCTaGAACACGGTCTTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPLLVYESLPMRSLVRQVPFSF*NTVLSF Trigger: AAAGCTCAAGACCGTGTTCCAGAAAGAAAATGGCAC...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| 3UTR CAA 72 bp | TGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTTaGCCAATGAGGTCTCTTGTAAGACAATACTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WLPILPLLVYES*PMRSLVRQYFV Trigger: AACAAAGTATTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCCACTTTTAGTCTATGAGTCTTTGCCAATGAGGTCTCTTGTAAGACAACTTCACTTCTTCTTTTaGAATCCCTGCCTTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPLLVYESLPMRSLVRQLHFFF*NPCLLN Trigger: ATTGAGAAGGCAGGGATTCCAAAAGAAGAAGTGAAG...TTGTCTTACAAGAGACCTCATTGGCAAAGACTCATAGACTAAAAGTGGCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | ACACCAAGCTGGCTATGTAGACTCGGATCCTCCTGCCTCTTCCTCCCAAGTGCTGCACCTCCTCCTCCGTaGCAAATACTAGCCAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: TPSWLCRLGSSCLFLPSAAPPPP*QILARP Trigger: CGGTCTGGCTAGTATTTGCAACGGAGGAGGAGGTGC...AGCACTTGGGAGGAAGAGGCAGGAGGATCCGAGTCTACATAGCCAGCTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS GCA 90 bp | ATTGAGCCTCTGGGCTGCCTCTGCAGTCATGAGAACCAGAGCAGCTaGTCCATCGTTCAGTGTGCTGGCATTGGCAGCTGTTATTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IEPLGCLCSHENQSS*SIVQCAGIGSCYCA Trigger: GGCACAATAACAGCTGCCAATGCCAGCACACTGAACGATGGAGCAGCTGCTCTGGTTCTCATGACTGCAGAGGCAGCCCAGAGGCTCAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS CCA 90 bp | AGCACCTCCTCCTCCGTTGCAAATACTAGCCAGACCGAACTCTCCTaGCTTCAGGGCATGAGCCATATGAACAACAATCCGGGCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STSSSVANTSQTELS*LQGMSHMNNNPGSR Trigger: TCTGGAGCCCGGATTGTTGTTCATATGGCTCATGCCCTGAAGCCAGGAGAGTTCGGTCTGGCTAGTATTTGCAACGGAGGAGGAGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | ACACCAAGCTGGCTATGTAGACTCGGATCCTCCTGCCTCTTCCTCCCAAGTGCTCCCCACCATATGGTGTaGCTCCTCTGCTCATTACGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSWLCRLGSSCLFLPSAPHHMV*LLCSLR Trigger: ACGTAATGAGCAGAGGAGCAACACCATATGGTGGGG...AGCACTTGGGAGGAAGAGGCAGGAGGATCCGAGTCTACATAGCCAGCTTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS GCA 90 bp | CACTTCTTCTTTTGGAATCCCTGCCTTCTCAATGGCTCCCTGAATTaGAGCAGTACCAAGTTTAGTGGCCGGCTGAGAGGCAAGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HFFFWNPCLLNGSLN*SSTKFSGRLRGKAA Trigger: GGCAGCCTTGCCTCTCAGCCGGCCACTAAACTTGGTACTGCTGCAATTCAGGGAGCCATTGAGAAGGCAGGGATTCCAAAAGAAGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS GCA 90 bp | CATATGGTGTTGCTCCTCTGCTCATTACGTATGGGACATTGGACATaGTCTCCATCCCGCCTGCCACCATCACATCCTGATGTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: HMVLLLCSLRMGHWT*SPSRLPPSHPDVHT Trigger: TGTGTGGACATCAGGATGTGATGGTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS CCA 90 bp | AAGTTTTACCCCACCATATGGTGTTGCTCCTCTGCTCATTACGTATaGGACATTGGACATGCTCTCCATCCCGCCTGCCACCATCACATC | + |
|
Preference number: 5 (lower is better) Translates to: KFYPTIWCCSSAHYV*DIGHALHPACHHHI Trigger: GATGTGATGGTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGCTCCAGACATCCCAATaGGATGGCCCAGAGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVLQTSQ*DGPEKQ Trigger: CTGTTTCTCTGGGCCATCCAATTGGGATGTCTGGAG...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS GCA 90 bp | CAATCAGGTCTTCAAGTTTTACCCCACCATATGGTGTTGCTCCTCTaGTCATTACGTATGGGACATTGGACATGCTCTCCATCCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSGLQVLPHHMVLLL*SLRMGHWTCSPSRL Trigger: CAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAACTTGAAGACCTGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGTTCAGTGTGCTGGCATaGGCAGCTGTTATTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVFSVLA*AAVIVP Trigger: TGGCACAATAACAGCTGCCAATGCCAGCACACTGAA...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS TCA 90 bp | CAAACTTCCCTGCGTCCCACGCTTCTTTACTTCTGGTGTAAGAGCTaGGAGCGTACGTATCCTGTTCCTGCCGTGAGATATTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QTSLRPTLLYFWCKS*ERTYPVPAVRYSSS Trigger: AGAAGATGAATATCTCACGGCAGGAACAGGATACGTACGCTCTCAGCTCTTACACCAGAAGTAAAGAAGCGTGGGACGCAGGGAAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCCTGTCCTTCACCCCCTaGGATGACATTGCCCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: QSYTYLILCYLRARGFPFLSFTP*DDIAHV Trigger: TACATGGGCAATGTCATCCAAGGGGGTGAAGGACAG...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGAGGTAGAAAAGCACAGGACCTCATTTCTCTGGTTTCTGCGTGCAGTGTCCACACATAAGACTTaGAGAGGCCATCATGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEVEKHRTSFLWFLRAVSTHKT*RGHHDG Trigger: GCCATCATGATGGCCTCTCAAAGTCTTATGTGTGGA...CACTGCACGCAGAAACCAGAGAAATGAGGTCCTGTGCTTTTCTACCTCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTATTACGTATGGGACATaGGACATGCTCTCCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLLESTWLPILPLLVYESITYGT*DMLSIP Trigger: CGGGATGGAGAGCATGTCCAATGTCCCATACGTAAT...AGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS CCA 90 bp | TCCTGCATATTTAAGAACCTTAGGTACGGCATATGCAGGCGCAAGTaGAAAATCAATGGGGTCTACGGCAGCATCAGCAAATGCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCIFKNLRYGICRRK*KINGVYGSISKCCN Trigger: ATTGCAGCATTTGCTGATGCTGCCGTAGACCCCATTGATTTTCCACTTGCGCCTGCATATGCCGTACCTAAGGTTCTTAAATATGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
||
| CDS-3UTR CAA 90 bp | GTGCTACTTGAGAGCACGTGGCTTCCCATTCTGCCACTTTTAGTCTATGAGTCTTTCTGGAACACGGTCTaGAGCTTTGGCACTTTACTA | + |
|
Preference number: 5 (lower is better) Translates to: VLLESTWLPILPLLVYESFWNTV*SFGTLL Trigger: TAGTAAAGTGCCAAAGCTCAAGACCGTGTTCCAGAA...AGACTCATAGACTAAAAGTGGCAGAATGGGAAGCCACGTGCTCTCAAGTAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCTACACCTACTTGATTTTGTGCTACTTGAGAGCACGTGGCTTCCCATTCTCCAGCATTTTAATGTaGGCTAGCACAACCACACTG | + |
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Preference number: 5 (lower is better) Translates to: QSYTYLILCYLRARGFPFSSILM*ASTTTL Trigger: CAGTGTGGTTGTGCTAGCCAACATTAAAATGCTGGA...GAATGGGAAGCCACGTGCTCTCAAGTAGCACAAAATCAAGTAGGTGTAGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS TCA 90 bp | TCCACACATAAGACTTTGAGAGGCCATCATGATGGCTTTCATTCCTaGAGCACAAACCTTGTTTACTGTGGTGCATGGAGTGGAAATAGG | + |
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Preference number: 5 (lower is better) Translates to: STHKTLRGHHDGFHS*STNLVYCGAWSGNR Trigger: CCTATTTCCACTCCATGCACCACAGTAAACAAGGTTTGTGCTTCAGGAATGAAAGCCATCATGATGGCCTCTCAAAGTCTTATGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR CAA 90 bp | CTACCTCCCCAGTCCTCTTCTGTCTTCTTGGTGATTGTTCCCTTCATTGATGTTCATTGGCAGCTGTTATaGTGCCATTTTCTTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LPPQSSSVFLVIVPFIDVHWQLL*CHFLSG Trigger: TCCAGAAAGAAAATGGCACAATAACAGCTGCCAATG...AACATCAATGAAGGGAACAATCACCAAGAAGACAGAAGAGGACTGGGGAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR CAA 90 bp | AGATGTAAAAATGCTGGAACTTTACCCTGCCTTCATCAGGAGAGAACCCGGTTACTAAAGTCAACACGCTaGTATTCTTCATCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: RCKNAGTLPCLHQERTRLLKSTR*YSSSSF Trigger: GAAAGAAGATGAAGAATACAAGCGTGTTGACTTTAG...TAACCGGGTTCTCTCCTGATGAAGGCAGGGTAAAGTTCCAGCATTTTTACATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS-3UTR CAA 90 bp | CAGAATAGAAGTCCATGGATGTTAGATTATTTTGGGGCTTGGGAGAGTCAAGGAAGATATTCATCTTCTTaGCAGTATTCTCAGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: QNRSPWMLDYFGAWESQGRYSSS*QYSQHS Trigger: ACTGTGCTGAGAATACTGCAAAGAAGATGAATATCT...TCCTTGACTCTCCCAAGCCCCAAAATAATCTAACATCCATGGACTTCTATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | ATCTTACTTCCTGCAGCAGCCCGCGAAGCAGAGGCCTaGGGACGACGCCGTGCAGAGCCACCAGGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ILLPAAAREAEA*GRRRAEPPGQP Trigger: TGGCTGCCCTGGTGGCTCTGCACGGCGTCGTCCGCAGGCCTCTGCTTCGCGGGCTGCTGCAGGAAGTAAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | GGAGTGGAAATAGGTAAACCTGCGCCCAGTGTTGCTTaGCTGGTAGGGGCCTGTCCTTCACCCCCTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: GVEIGKPAPSVA*LVGACPSPPWM Trigger: CATCCAAGGGGGTGAAGGACAGGCCCCTACCAGGCAAGCAACACTGGGCGCAGGTTTACCTATTTCCACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | GGGGTCTACGGCAGCATCAGCAAATGCTGCAATTCGTaGCAATGGCTTAACATTGAGCCTCTGGGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GVYGSISKCCNS*QWLNIEPLGCL Trigger: GAGGCAGCCCAGAGGCTCAATGTTAAGCCATTGGCACGAATTGCAGCATTTGCTGATGCTGCCGTAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CCA 72 bp | CCCACCATATGGTGTTGCTCCTCTGCTCATTACGTATaGGACATTGGACATGCTCTCCATCCCGCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PTIWCCSSAHYV*DIGHALHPACH Trigger: GTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CAA 72 bp | TGTTGCTTGCCTGGTAGGGGCCTGTCCTTCACCCCCTaGGATGACATTGCCCATGTAGACTTCCTTCACTTC | + |
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Preference number: 6 (lower is better) Translates to: CCLPGRGLSFTP*DDIAHVDFLHF Trigger: GAAGTGAAGGAAGTCTACATGGGCAATGTCATCCAAGGGGGTGAAGGACAGGCCCCTACCAGGCAAGCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | TTGCTCCTCTGCTCATTACGTATGGGACATTGGACATaGTCTCCATCCCGCCTGCCACCATCACATCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LLLCSLRMGHWT*SPSRLPPSHPD Trigger: ATCAGGATGTGATGGTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS TCA 72 bp | CTGCGTCCCACGCTTCTTTACTTCTGGTGTAAGAGCTaGGAGCGTACGTATCCTGTTCCTGCCGTGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LRPTLLYFWCKS*ERTYPVPAVRY Trigger: ATATCTCACGGCAGGAACAGGATACGTACGCTCTCAGCTCTTACACCAGAAGTAAAGAAGCGTGGGACGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | TACGTATGGGACATTGGACATGCTCTCCATCCCGCCTaGCACCATCACATCCTGATGTCCACACATAAGACT | + |
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Preference number: 6 (lower is better) Translates to: YVWDIGHALHPA*HHHILMSTHKT Trigger: AGTCTTATGTGTGGACATCAGGATGTGATGGTGGCAGGCGGGATGGAGAGCATGTCCAATGTCCCATACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CCA 72 bp | TCCTCCGTTGCAAATACTAGCCAGACCGAACTCTCCTaGCTTCAGGGCATGAGCCATATGAACAACAATCCG | + |
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Preference number: 6 (lower is better) Translates to: SSVANTSQTELS*LQGMSHMNNNP Trigger: CGGATTGTTGTTCATATGGCTCATGCCCTGAAGCCAGGAGAGTTCGGTCTGGCTAGTATTTGCAACGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CAA 72 bp | TCAGCAAATGCTGCAATTCGTGCCAATGGCTTAACATaGAGCCTCTGGGCTGCCTCTGCAGTCATGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: SANAAIRANGLT*SLWAASAVMRT Trigger: GGTTCTCATGACTGCAGAGGCAGCCCAGAGGCTCAATGTTAAGCCATTGGCACGAATTGCAGCATTTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | GATGGTGATGGGAGTAATCTCACTGGCAAACTTCCCTaGGTCCCACGCTTCTTTACTTCTGGTGTAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: DGDGSNLTGKLP*VPRFFTSGVRA Trigger: AGCTCTTACACCAGAAGTAAAGAAGCGTGGGACGCAGGGAAGTTTGCCAGTGAGATTACTCCCATCACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | CAGTCCTGCATATTTAAGAACCTTAGGTACGGCATATaGAGGCGCAAGTGGAAAATCAATGGGGTCTACGGC | + |
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Preference number: 6 (lower is better) Translates to: QSCIFKNLRYGI*RRKWKINGVYG Trigger: GCCGTAGACCCCATTGATTTTCCACTTGCGCCTGCATATGCCGTACCTAAGGTTCTTAAATATGCAGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | CTTCAAGTTTTACCCCACCATATGGTGTTGCTCCTCTaGTCATTACGTATGGGACATTGGACATGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQVLPHHMVLLL*SLRMGHWTCSP Trigger: TGGAGAGCATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAACTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CAA 72 bp | CAATCAGGTCTTCAAGTTTTACCCCACCATATGGTGTaGCTCCTCTGCTCATTACGTATGGGACATTGGACA | + |
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Preference number: 6 (lower is better) Translates to: QSGLQVLPHHMV*LLCSLRMGHWT Trigger: TGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAACTTGAAGACCTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS TCA 72 bp | AAGACTTTGAGAGGCCATCATGATGGCTTTCATTCCTaGAGCACAAACCTTGTTTACTGTGGTGCATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: KTLRGHHDGFHS*STNLVYCGAWS Trigger: ACTCCATGCACCACAGTAAACAAGGTTTGTGCTTCAGGAATGAAAGCCATCATGATGGCCTCTCAAAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | AATCAGGTCTTCAAGTTTTACCCCACCATATGGTGTTaGTCCTCTGCTCATTACGTATGGGACATTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: NQVFKFYPTIWC*SSAHYVWDIGH Trigger: ATGTCCAATGTCCCATACGTAATGAGCAGAGGAGCAACACCATATGGTGGGGTAAAACTTGAAGACCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS GCA 72 bp | ACTTACTATAACCACTTCATTCAAAGTGGGTTTGGATaGATAACTTCGTTCCAGGCATCTTACTTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: TYYNHFIQSGFG*ITSFQASYFLQ Trigger: CTGCAGGAAGTAAGATGCCTGGAACGAAGTTATGCATCCAAACCCACTTTGAATGAAGTGGTTATAGTAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CCA 72 bp | TGTGCCATTTTCTTTCTGGAACACGGTCTTGAGCTTTaGCACTTTACTAAAGTCAACACGCTTGTATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CAIFFLEHGLEL*HFTKVNTLVFF Trigger: GAAGAATACAAGCGTGTTGACTTTAGTAAAGTGCCAAAGCTCAAGACCGTGTTCCAGAAAGAAAATGGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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| CDS CAA 72 bp | ACGTATCCTGTTCCTGCCGTGAGATATTCATCTTCTTaGCAGTATTCTCAGCACAGTTACCCATATGAATTT | + |
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Preference number: 6 (lower is better) Translates to: TYPVPAVRYSSS*QYSQHSYPYEF Trigger: AAATTCATATGGGTAACTGTGCTGAGAATACTGCAAAGAAGATGAATATCTCACGGCAGGAACAGGATACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034547.6 |
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