RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030607

Ensembl transcript IDs: ENSMUST00000032835.7, ENSMUST00000206779.2

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTaGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: KSDKKTPCGWDARSA*LAAGLSILGTLWKL
Trigger: GAGCTTCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR GCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATaGACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: SLYDKKRQEDTMWVG*TVSLAGRWAQHPGH
Trigger: GTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTCATATAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR CCA 90 bp TGGATTCCTTATATGACAAAAAGCGACAAGAAGACACCATGTGGGTaGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTG +
Preference number: 1 (lower is better)
Translates to: WIPYMTKSDKKTPCG*DARSAWLAAGLSIL
Trigger: CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR CCA 90 bp TTAATGGATTCCTTATATGACAAAAAGCGACAAGAAGACACCATGTaGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCAT +
Preference number: 1 (lower is better)
Translates to: LMDSLYDKKRQEDTM*VGCTVSLAGRWAQH
Trigger: ATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAGCCTGGCTGGCCGCTaGGCTCAGCATCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGSLAGR*AQHPGH
Trigger: GTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCT...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCCCTGCACTGGTCCCTaGAAAGGCACGGTGGGAAAT +
Preference number: 2 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAPCTGP*KGTVGN
Trigger: ATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCACGGTCAGCCTGGCTaGCCGCTGGGCTCAGCATCC +
Preference number: 2 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTHGQPG*PLGSAS
Trigger: GGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCAAGAAGACACCATGTaGGTGGGATGCACGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAQEDTM*VGCTVS
Trigger: GCTGACCGTGCATCCCACCCACATGGTGTCTTCTTG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGGATGCACGGTCAGCCTaGCTGGCCGCTGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVDARSA*LAAGLS
Trigger: GCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATC...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCTGGGCTCAGCATCCTaGGCACATTATGGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTLGSAS*AHYGSS
Trigger: GGAGCTTCCATAATGTGCCCAGGATGCTGAGCCCAG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR-3UTR CCA 90 bp ACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTATCCCCTAGCTCTCCCTaGAGGCGAAGTAACCAACCA +
Preference number: 2 (lower is better)
Translates to: TLSCTLPLLSPPSSVTALSPSSP*RRSNQP
Trigger: TGGTTGGTTACTTCGCCTCCAGGGAGAGCTAGGGGA...TAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR CAA 90 bp TGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTaGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTC +
Preference number: 2 (lower is better)
Translates to: WHRPQFLLSNTLSCT*PLLSPPSSVTALLL
Trigger: GAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR CAA 90 bp ACCCCAGGCTCCTTCCCTCACAGATGGCACAGACCTCAATTCCTTTaGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: TPGSFPHRWHRPQFL*SNTLSCTLPLLSPP
Trigger: TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAAGGAGCCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGCTGGGCTCAGCATCCTaGGCACATTATGGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVLGSAS*AHYGSS
Trigger: GGAGCTTCCATAATGTGCCCAGGATGCTGAGCCCAG...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTTTTCAGCTCCTCCTCTaGTCCCCTAGCTCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCFQLLL*SPSSPW
Trigger: CCAGGGAGAGCTAGGGGACCAGAGGAGGAGCTGAAA...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR CCA 72 bp AGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTaGCCGCTGGGCTCAGCATCCTGGGCACATTATGGA +
Preference number: 3 (lower is better)
Translates to: RHHVGGMHGQPG*PLGSASWAHYG
Trigger: TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR CCA 72 bp AAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTaGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTA +
Preference number: 3 (lower is better)
Translates to: KKTPCGWDARSA*LAAGLSILGTL
Trigger: TAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR GCA 72 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATaGACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: DKKRQEDTMWVG*TVSLAGRWAQH
Trigger: ATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR TCA 72 bp GGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATaGCACCTGCTAGGTTGGTTGACCCAGATGAAAGGT +
Preference number: 3 (lower is better)
Translates to: GKEVPLPSPAEK*HLLGWLTQMKG
Trigger: ACCTTTCATCTGGGTCAACCAACCTAGCAGGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CAA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCACGGGTTACAGTGAATaGCTTTGGCATTTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGTGYSE*LWHFSF
Trigger: AAAAGAAAAATGCCAAAGCAATTCACTGTAACCCGT...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR-3UTR CAA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGGTTACAGTGAATaGCTTTGGCATTTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGTGYSE*LWHFSF
Trigger: AAAAGAAAAATGCCAAAGCAATTCACTGTAACCCGT...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
3UTR-3UTR CAA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCACGAAGTAACCAACCATaGTACTGTTCTTGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPRSNQP*YCSWAK
Trigger: CTTTGCCCAAGAACAGTACAATGGTTGGTTACTTCG...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGTGGGCTGGCACCGGATaGTGGGCACGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWWAGTG*WARGAG
Trigger: TCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCA...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCTTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILLPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTTACACCCAGGAGGTTaGCCCCGCAGTTGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHLHPGG*PRSWAE
Trigger: CTCGGCCCAACTGCGGGGGCAACCTCCTGGGTGTAA...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTGGGGATGTGCCCACTaGGGTGTAGGCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHWGCAH*GVGWLP
Trigger: TGGGAGCCAGCCTACACCCCAGTGGGCACATCCCCA...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCGGCCGATCCCTCCCTaGTGCCTTCCTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILRPIPP*CLPERS
Trigger: GGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATGTGGGCACGTGGCGCTaGACAAAGCCCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHVGTWR*TKPSVH
Trigger: GTGCACTGAGGGCTTTGTCCAGCGCCACGTGCCCAC...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTGCGCTTCCTGGAAGGTaGACTGCTCGAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIALPGR*TARGVW
Trigger: CCACACGCCTCGAGCAGTTCACCTTCCAGGAAGCGC...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCACTTGGGAGGCCACTaGACTCTGGAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWHLGGH*TLEWGM
Trigger: CATCCCCCACTCCAGAGTTCAGTGGCCTCCCAAGTG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGACGGCCCCGGTGTGCATaGAGGCCTGCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGRPRCA*RPAVPP
Trigger: AGGAGGCACAGCAGGCCTGCATGCACACCGGGGCCG...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATCCTTCCCGGGGCGTGTaGATGGGGTATCTGACTGTC +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHPSRGV*MGYLTV
Trigger: GACAGTCAGATACCCCATCCACACGCCCCGGGAAGG...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAACAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEQCPLG*HRMVGT
Trigger: CGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCTTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQALPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGAGTAGCAGGGGATGGTaGGGGAAGACCCTAGGAGGA +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWSSRGW*GKTLGG
Trigger: TCCTCCTAGGGTCTTCCCTCACCATCCCCTGCTACT...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCTGAGGGCTGCCCACTaGGATCAGAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILLRAAH*DQKSQR
Trigger: CCTCTGGGATTTCTGATCTCAGTGGGCAGCCCTCAG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCACTGCCACTTATGGTaGCAGAAGCCAGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWHCHLW*QKPGQG
Trigger: CCCCTGACCTGGCTTCTGGCACCATAAGTGGCAGTG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAAGAGCTGGCCTGTGGTaGCCAAGCGTGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWERAGLW*PSVPPA
Trigger: GGCTGGGGGCACGCTTGGCCACCACAGGCCAGCTCT...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCGCCGAGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTAEPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCTCGGC...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGGGTGGGAAGCCATGTaGGAGGGATCCCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWGWEAM*EGSLAV
Trigger: CACAGCCAGGGATCCCTCCCACATGGCTTCCCACCC...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGACGCCTCCCCAGAGCCTaGCAGCTCTGTCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGRLPRA*QLCHAR
Trigger: CCGAGCATGACAGAGCTGCCAGGCTCTGGGGAGGCG...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATGAGGCCACTGAACTCTaGAGTGGGGGATGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHEATEL*SGGCES
Trigger: GGACTCACATCCCCCACTCCAGAGTTCAGTGGCCTC...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATCAGAAGCCATGGGTGTaGCAGAAGGCACCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHQKPWV*QKAPLK
Trigger: CTTCAGGGGTGCCTTCTGCCACACCCATGGCTTCTG...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGCGGATGGTGGGCACGTaGCGCTGGACAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWRMVGT*RWTKPS
Trigger: TGAGGGCTTTGTCCAGCGCCACGTGCCCACCATCCG...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCAGCTCACTGTGGGGCTaGGGCCACTGGAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGSSLWG*GHWSQG
Trigger: ACCTTGACTCCAGTGGCCTCAGCCCCACAGTGAGCT...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTTCTACAGGCAGGCCTaGGCTCACTGTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGFYRQA*AHCGAE
Trigger: CTCAGCCCCACAGTGAGCTCAGGCCTGCCTGTAGAA...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTGCCATCAAATGCTCCTaGGGGCAAGCTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIAIKCS*GQAAPS
Trigger: ACTGGGAGCAGCTTGCCCTCAGGAGCATTTGATGGC...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCACAGTGGGGAAACCTaGGACAAGTCCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWHSGET*DKSTAI
Trigger: GATGGCAGTGGACTTGTCTCAGGTTTCCCCACTGTG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCTTCGCTGTCCTCGATaGCGTGCATCACTTCACAGC +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILLRCPR*RASLHS
Trigger: GCTGTGAAGTGATGCACGGCATCGAGGACAGCGAAG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCCCTCTGGGAAGGCTGTaGTCCCCACTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGPLGRL*SPLQGQ
Trigger: TTGCCCCTGAAGTGGGGAGCACAGCCTTCCCAGAGG...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTCCGATCCCTCCCTGGTaGCTTCCTGAAAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIPIPPW*LPERSM
Trigger: CATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGG...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTCTCAGATGTGACTGCTaGTCCCGACACCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHILRCDC*SRHRLS
Trigger: GGAGAGACGGTGTCGGGAGCAGCAGTCACATCTGAG...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCCAGGTCACCGTCTaGATGGTGATGTCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILGQVTV*MVMSSS
Trigger: TGAAGACGACATCACCATCCAGACGGTGACCTGGCC...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCTGCACCTGGAGAGATaGTCACTCGCACTACCAGGT +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILLHLER*SLALPG
Trigger: ACCTGGTAGTGCGAGTGACCATCTCTCCAGGTGCAG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCTCCACTGCCACTTATaGTGCCAGAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWLHCHL*CQKPGQ
Trigger: CTGACCTGGCTTCTGGCACCATAAGTGGCAGTGGAG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCAGCATGCTCCACCACTaGGGGGTCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTSMLHH*GVSTGH
Trigger: GTGGCCTGTGGAGACCCCCCAGTGGTGGAGCATGCT...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTAGGCATCCACGCAGGTaGCTCCATTCAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIRHPRR*LHSDKG
Trigger: GCCCTTGTCTGAATGGAGCCACCTGCGTGGATGCCT...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTGAAGGCATGGTGCTTTaGCAGTGGGTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAEGMVL*QWVREA
Trigger: GGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTC...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCAGACCATTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWQTILR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGAATGGTCTG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGTCCTGGAAGGTGAACTaGTCGAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWSWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTCGAGCAGTTCACCTTCCAGGA...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATAAGCAGAAGGCATGGTaGTTTGACAGTGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHKQKAW*FDSGSG
Trigger: CCCTGACCCACTGTCAAAGCACCATGCCTTCTGCTT...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTGCCCAGACTGCAATGTaGTTAGGTCCAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIAQTAM*LGPETQ
Trigger: CTGGGTCTCTGGACCTAAGCACATTGCAGTCTGGGC...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAGGGATCCCTGGCTGTaGGGATGTGCCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGRDPWL*GCAHWG
Trigger: ACCCCAGTGGGCACATCCCCACAGCCAGGGATCCCT...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCAGACAGGTCACTGCTaGCTTCTGGGACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILQTGHC*LLGLKL
Trigger: AAGCTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCCTGGCAAGCGGGGCTaGCCAGGGACTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVPGKRG*PGTSAA
Trigger: TGCAGCTGAAGTCCCTGGTCAGCCCCGCTTGCCAGG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGTGTAATTTCTCCTCCTaGAGGCAGCCCACTAAGGTC +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILCNFSS*RQPTKV
Trigger: GACCTTAGTGGGCTGCCTTCAGGAGGAGAAATTACA...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATCAGAAGGAAAGCCACTaGGTTCCACAGATCCTAACC +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHQKESH*VPQILT
Trigger: GGTTAGGATCTGTGGAACTCAGTGGCTTTCCTTCTG...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCCACAGTGGGGAAACCTaGGACAAGTCCACTGCCATC +
Preference number: 4 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGHSGET*DKSTAI
Trigger: GATGGCAGTGGACTTGTCTCAGGTTTCCCCACTGTG...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCATGGAAGGCAGAAGTaGTTCCATGCAGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWHGRQK*FHADLG
Trigger: TCCCAGATCTGCATGGAATCACTTCTGCCTTCCATG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGAGGCAGAAGGCACCCCTaGAGTGCCTGTGTCTATGTC +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGGRRHP*SACVYV
Trigger: GACATAGACACAGGCACTTCAGGGGTGCCTTCTGCC...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGTGCCCTTTTTACACGTaGAGGGCAGCTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWCPFYT*RAAGNC
Trigger: GCAATTACCAGCTGCCCTTCACGTGTAAAAAGGGCA...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGATGGGGTCTGTGCAGGTaGTTCGAGGCTCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGWGLCR*FEALPS
Trigger: ACTGGGAAGAGCCTCGAATCACCTGCACAGACCCCA...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCCCGGCACTCGTTGGCTaGCTCCTGGAAGGTGAATTT +
Preference number: 4 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGPALVG*LLEGEF
Trigger: AAATTCACCTTCCAGGAGGCAGCCAACGAGTGCCGG...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCTCCAGAGGGCAACCTaGCAACTGTGGGAGTATGGG +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTLQRAT*QLWEYG
Trigger: CCCATACTCCCACAGTTGGCAGGTTGCCCTCTGGAG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTGTCAGGGGTTCTGGTTaGTGTTCCACTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIVRGSG*CSTEHW
Trigger: CCAGTGTTCAGTGGAACAGCAACCAGAACCCCTGAC...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCGCCACTTCTCAAATTaGAGAGAGTGTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWRHFSN*RECPSD
Trigger: GTCTGACGGACACTCTCTGCAATTTGAGAAGTGGCG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAGGACAAAGCCCTCAGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEGQSPQ*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACTGAGGGCTTTGTCC...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCTACCAGGTCCTCACTaGCGAAGGCAGTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQALPGPH*RRQWQS
Trigger: ACTCTGCCACTGCCTTCGCCAGTGAGGACCTGGTAG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTAGGCAGGCCAGAGGATaGGCCACTTCCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQARQARG*ATSNVC
Trigger: GCAGACATTGGAAGTGGCCCATCCTCTGGCCTGCCT...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGAGAGGCCACTGAACTCTaGAGTGGGGGATGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGEATEL*SGGCES
Trigger: GGACTCACATCCCCCACTCCAGAGTTCAGTGGCCTC...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCAGAAGCCATGGGTGTaGCAGAAGGCACCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTQKPWV*QKAPLK
Trigger: CTTCAGGGGTGCCTTCTGCCACACCCATGGCTTCTG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGCTGAAGAAGAGAGGGTaGGGGCATCTGTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWLKKRG*GHLSGT
Trigger: TGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAG...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAGGCAGAAGGCACCCCTaGAGTGCCTGTGTCTATGTC +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGGRRHP*SACVYV
Trigger: GACATAGACACAGGCACTTCAGGGGTGCCTTCTGCC...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTGGGAACCCTGAGGGCTaGCCACTGAGATCAGAAATC +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAGNPEG*PLRSEI
Trigger: GATTTCTGATCTCAGTGGGCAGCCCTCAGGGTTCCC...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCAGAGCTTTCCCCACTaGCAGTTGTGGCAGCTATGG +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAQSFPH*QLWQLW
Trigger: CCATAGCTGCCACAACTGGCAGTGGGGAAAGCTCTG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGAAGCAGACAGGTCACTaGTGGCTTCTGGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWKQTGH*WLLGLK
Trigger: CTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTGCTT...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAACCGATCCCTCCCTGGTaGCTTCCTGAAAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEPIPPW*LPERSM
Trigger: CATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGG...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAGGTAGAGCTGGCCTGTaGTGGCCAAGCGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQGRAGL*WPSVPP
Trigger: TGGGGGCACGCTTGGCCACCACAGGCCAGCTCTACC...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCTGTGGGAGGGATCCCTaGCTGTGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGCGRDP*LWGCAH
Trigger: GTGGGCACATCCCCACAGCCAGGGATCCCTCCCACA...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCTCCAGATGTCGCAGTaGTGTCAGGAGTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTLQMSQ*CQESLM
Trigger: CATCAGGGACTCCTGACACCACTGCGACATCTGGAG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGTTGGTGTCTCCGTGCTaGTTTCCATCTGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWLVSPC*FPSAQT
Trigger: AGTCTGGGCAGATGGAAACCAGCACGGAGACACCAA...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCTCCACTTACATCAGTaGTGCTGGAAAAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWLHLHQ*CWKSLH
Trigger: GTGGAGACTTTTCCAGCACCACTGATGTAAGTGGAG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGCAGACAGGTCACTGCTaGCTTCTGGGACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWQTGHC*LLGLKL
Trigger: AAGCTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTG...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGTTGTTTCTGCTGTCTaGGTCTCCTCTCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWVVSAV*VSSPEY
Trigger: ATACTCAGGAGAGGAGACCCAGACAGCAGAAACAAC...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCCGGATGGTGGGCACGTaGCGCTGGACAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LYFASSESSKLCDRPTPPRMVGT*RWTKPS
Trigger: TGAGGGCTTTGTCCAGCGCCACGTGCCCACCATCCG...GGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAGCTGGCACCGGATGGTaGGCACGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKAGTGW*ARGAGQ
Trigger: TTGTCCAGCGCCACGTGCCCACCATCCGGTGCCAGC...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGAGATGCTCACGCTCAGTaGGTTGTCATGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGDAHAQ*VVMVWN
Trigger: GTTCCAGACCATGACAACTCACTGAGCGTGAGCATC...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTTCTTGGCTCAGTGGTaGAATATGGCACTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHFLAQW*NMALLL
Trigger: CAACAGAAGTGCCATATTTCACCACTGAGCCAAGAA...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGCTTTCAGTAGGAAGCTaGGTGACATCCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWLSVGS*VTSSAP
Trigger: AGGTGCAGAGGATGTCACTCAGCTTCCTACTGAAAG...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGAACACTGGGAACCCTaGGGGCTGCCCACTGAGATC +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVEHWEP*GLPTEI
Trigger: GATCTCAGTGGGCAGCCCTCAGGGTTCCCAGTGTTC...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGATGGTTGCTGTTCCACTaGACACTGGGAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGWLLFH*TLGTLR
Trigger: CCTCAGGGTTCCCAGTGTTCAGTGGAACAGCAACCA...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCAAGCAGACAGGTCACTaGTGGCTTCTGGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTKQTGH*WLLGLK
Trigger: CTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTGCTT...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTGGACATGGTTGTTTCTaGTGTCTGGGTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQAGHGCF*CLGLLS
Trigger: GGAGAGGAGACCCAGACAGCAGAAACAACCATGTCC...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCGGACAAAGCCCTCAGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGGQSPQ*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACTGAGGGCTTTGTCC...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTAGATCCCAGAGTCATTaGAGCGAAGGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHIRSQSH*SEGSGS
Trigger: AGATCCAGAACCTTCGCTCCAATGACTCTGGGATCT...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAGGGCAGCTCCAGGTCTaGCCAGGTCACCGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKGQLQV*PGHRLD
Trigger: ATCCAGACGGTGACCTGGCCAGACCTGGAGCTGCCC...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCACACATGGGGTTCGTaGGCTCACAATGGGGTATCT +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTHTWGS*AHNGVS
Trigger: AGATACCCCATTGTGAGCCCACGAACCCCATGTGTG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGACTCAGCTACTCCACTTaGGAGGCCACTGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGLSYST*EATELW
Trigger: CCAGAGTTCAGTGGCCTCCCAAGTGGAGTAGCTGAG...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTCTACAAGAGACACAGTaGGGAAACCTGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: VGCTVSLAGRWAQHPGHILQETQ*GNLRQV
Trigger: GACTTGTCTCAGGTTTCCCCACTGTGTCTCTTGTAG...AATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCAGTTGTGGCAGCTATaGATTCTCCACTTACATCAG +
Preference number: 4 (lower is better)
Translates to: PCGWDARSAWLAAGLSILQLWQL*ILHLHQ
Trigger: CTGATGTAAGTGGAGAATCCATAGCTGCCACAACTG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAACGGCCGATCCCTCCCTaGTGCCTTCCTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQRPIPP*CLPERS
Trigger: GGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCG...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTAGCATGCTCCACCACTaGGGGGTCTCCACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLASMLHH*GVSTGH
Trigger: GTGGCCTGTGGAGACCCCCCAGTGGTGGAGCATGCT...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGAAGCCCTCAGTGCACTaGTACCGCACCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVKPSVH*YRTREL
Trigger: CAGCTCCCTGGTGCGGTACCAGTGCACTGAGGGCTT...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCGGTGGAAGGGACTGCTaGGGCAGAGGGCTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YFASSESSKLCDRPTPPFGGRDC*GRGLFR
Trigger: TCTGAAGAGCCCTCTGCCTCAGCAGTCCCTTCCACC...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCGGAGTCAAGGCGTCCTaGAGCATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGGVKAS*SISTAC
Trigger: ACAGGCAGTGGAGATGCTTCAGGACGCCTTGACTCC...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTCAGAGGGCAAGCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLAQRASH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGCTTGCCCTCTG...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGTTTACTTCTGGAGTTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWFTSGV*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGTCAAACTCCAGAAGTAAA...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCTGAGGGCTGCCCACTaGGATCAGAAATCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVLRAAH*DQKSQR
Trigger: CCTCTGGGATTTCTGATCTCAGTGGGCAGCCCTCAG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCGCTGGCTTCTGGGACTaGAGCTTCTATCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: TLPLLSPPSSVTALLLPSAGFWD*SFYPRP
Trigger: GGGTCTGGGATAGAAGCTTCAGTCCCAGAAGCCAGC...GGAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGAATGCTGCTCAGATGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVNAAQM*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACATCTGAGCAGCATT...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCTCGGAGGGTGCCATCTaGCAGCCAGCCAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: YFASSESSKLCDRPTPPFSEGAI*QPASIA
Trigger: TGCTATGCTGGCTGGCTGGCAGATGGCACCCTCCGA...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCTGGCTGTGGGGATGTaGCCACTGGGGTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTLAVGM*PLGCRL
Trigger: CAGCCTACACCCCAGTGGGCACATCCCCACAGCCAG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp ACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCTGTGTGTTCCTCTGCTaGTGGGAGGGTGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLPLLSPPSSVTALLLPSCVFLC*WEGGKP
Trigger: TGGCTTCCCACCCTCCCAGCAGCAGAGGAACACACA...GGAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGATCAGGAGATCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWIRRSR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGATCTCCTGAT...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCATCATAGGTCTCATTaGTGTCCCGGATTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTHHRSH*CPGFRR
Trigger: CCTACGGAATCCGGGACACCAATGAGACCTATGATG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTAGGTTGCCCCCGCAGTTaGGCCGAGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: TLSCTLPLLSPPSSVTALGCPRS*AEPWRW
Trigger: CCATCTCCAAGGCTCGGCCCAACTGCGGGGGCAACC...TAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTAAGGCCCGCGCTTCCTaGAAGGTGAACTGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLAKARAS*KVNCSR
Trigger: CCTCGAGCAGTTCACCTTCCAGGAAGCGCGGGCCTT...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAAGAAACAGAGGTCTCTaGGTCCCCTCTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWERNRGL*VPSSRR
Trigger: CCTTCTGGAAGAGGGGACCCAGAGACCTCTGTTTCT...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAGATCACTGCAGCGATaGCCCTCAGAGTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGRSLQR*PSESQR
Trigger: TCTTTGTGACTCTGAGGGTCATCGCTGCAGTGATCT...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCGCTCAGGAGAGGCAATaGCGGCCCCGGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGAQERQ*RPRCAC
Trigger: GCATGCACACCGGGGCCGTCATTGCCTCTCCTGAGC...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAATGGAAGTGGTGGCTGTaGTCACTTCCACTAAGGTAC +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEWKWWL*SLPLRY
Trigger: GTACCTTAGTGGAAGTGATCACAGCCACCACTTCCA...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGAACACTGGGAACCCTaGGGGCTGCCCACTGAGATC +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTEHWEP*GLPTEI
Trigger: GATCTCAGTGGGCAGCCCTCAGGGTTCCCAGTGTTC...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCACTTGGGAGGCCACTaGACTCTGGAGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: KLYFASSESSKLCDRPTPHLGGH*TLEWGM
Trigger: CATCCCCCACTCCAGAGTTCAGTGGCCTCCCAAGTG...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGCTGGCTTCTGGGACTaGAGCTTCTATCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLAAGFWD*SFYPRP
Trigger: GGGTCTGGGATAGAAGCTTCAGTCCCAGAAGCCAGC...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAACATGGAAGGCAGAAGTaGTTCCATGCAGATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEHGRQK*FHADLG
Trigger: TCCCAGATCTGCATGGAATCACTTCTGCCTTCCATG...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCTCCCTGGTGCCTTCCTaGAAGGTCCATGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: YFASSESSKLCDRPTPPFSLVPS*KVHGLL
Trigger: CAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGA...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTAATGCTGCTCAGATGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLANAAQM*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACATCTGAGCAGCATT...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAATGGGGTCTGTGCAGGTaGTTCGAGGCTCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKWGLCR*FEALPS
Trigger: ACTGGGAAGAGCCTCGAATCACCTGCACAGACCCCA...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCATGACGGCCCCGGTGTaGATGCAGGCCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGMTAPV*MQACCA
Trigger: GGCACAGCAGGCCTGCATGCACACCGGGGCCGTCAT...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGCAGATGTTTCTCCACTaGTATCAGGAGATCCAGATG +
Preference number: 4 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWQMFLH*YQEIQM
Trigger: CATCTGGATCTCCTGATAGCAGTGGAGAAACATCTG...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAACTGAGACAAGTCCACTaGCATCAAATGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWELRQVH*HQMLLR
Trigger: CCTCAGGAGCATTTGATGGCAGTGGACTTGTCTCAG...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGCCCAGACTGCAATGTaGTTAGGTCCAGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVAQTAM*LGPETQ
Trigger: CTGGGTCTCTGGACCTAAGCACATTGCAGTCTGGGC...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTCTCAGATGTGACTGCTaGTCCCGACACCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLALRCDC*SRHRLS
Trigger: GGAGAGACGGTGTCGGGAGCAGCAGTCACATCTGAG...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTCTGCTCAGATGTGACTaGTGCTCCCGACACCGTCTC +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLALLRCD*CSRHRL
Trigger: GAGACGGTGTCGGGAGCAGCAGTCACATCTGAGCAG...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCAGTGGAGGGGGCAGTaGTCACAGGATGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTQWRGQ*SQDAWG
Trigger: ACCCCATGCATCCTGTGACCACTGCCCCCTCCACTG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTAAGTTGGGCCGAGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: TLSCTLPLLSPPSSVTALSWAEP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCTCGGCCCAACT...TAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGACTTCAGCTGCACCTaGAGAGATGGTCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVDFSCT*RDGHSH
Trigger: GTGCGAGTGACCATCTCTCCAGGTGCAGCTGAAGTC...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGACAGAAGGAAGTCCACTaGTTTCTTCTGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGQKEVH*FLLPQK
Trigger: CTTCTGGGGCAGAAGAAACCAGTGGACTTCCTTCTG...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTCTCCACTTACATCAGTaGTGCTGGAAAAGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQALHLHQ*CWKSLH
Trigger: GTGGAGACTTTTCCAGCACCACTGATGTAAGTGGAG...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGAGTCATAGAAGGACCATaGCCAAGTTCCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGVIEGP*PSSWET
Trigger: TGTTTCCCAGGAACTTGGCCATGGTCCTTCTATGAC...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCTGAAGAAGAGAGGGTaGGGGCATCTGTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVLKKRG*GHLSGT
Trigger: TGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp ACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTAGTGGGCACGTGGCGCTaGACAAAGCCCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLSCTLPLLSPPSSVTALVGTWR*TKPSVH
Trigger: GTGCACTGAGGGCTTTGTCCAGCGCCACGTGCCCAC...TAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAATGGTTGCTGTTCCACTaGACACTGGGAACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQWLLFH*TLGTLR
Trigger: CCTCAGGGTTCCCAGTGTTCAGTGGAACAGCAACCA...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGTCCCTGGTGCCTTCCTaGAAGGTCCATGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTSLVPS*KVHGLL
Trigger: CAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGA...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCAGACCATTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGQTILR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGAATGGTCTG...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAGGGAACCCTGAGGGCTaGCCACTGAGATCAGAAATC +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQGNPEG*PLRSEI
Trigger: GATTTCTGATCTCAGTGGGCAGCCCTCAGGGTTCCC...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAACAGAGCTTTCCCCACTaGCAGTTGTGGCAGCTATGG +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKQSFPH*QLWQLW
Trigger: CCATAGCTGCCACAACTGGCAGTGGGGAAAGCTCTG...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTACTCAGACAGTTTACTaGTGGCCTCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLATQTVY*WPQGQQ
Trigger: CTGCTGCCCCTGAGGCCAGCAGTAAACTGTCTGAGT...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTTGCTGTTTACCTCTGTaGTTGGGGTTGTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SLGEGSAFSSASLSLPQACCLPL*LGLSFP
Trigger: TGGAAATGACAACCCCAAGCACAGAGGTAAACAGCA...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp ATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTATGGATGCTGTTTACCTCTGTaGTTGGGGTTGTCATTTCCA +
Preference number: 4 (lower is better)
Translates to: MHGQPGWPLGSASWAHYGCCLPL*LGLSFP
Trigger: TGGAAATGACAACCCCAAGCACAGAGGTAAACAGCA...TCCATAATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCGGACATGGTTGTTTCTaGTGTCTGGGTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGGHGCF*CLGLLS
Trigger: GGAGAGGAGACCCAGACAGCAGAAACAACCATGTCC...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCTGCTCAGATGTGACTaGTGCTCCCGACACCGTCTC +
Preference number: 4 (lower is better)
Translates to: KLYFASSESSKLCDRPTPLLRCD*CSRHRL
Trigger: GAGACGGTGTCGGGAGCAGCAGTCACATCTGAGCAG...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGAAAGCCCCAGGGTCTaGTGGCTTCTCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLAESPRV*WLLQFS
Trigger: AGAGAACTGGAGAAGCCACCAGACCCTGGGGCTTTC...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCATAGAGCTGGCCGGTaGAGGCCAGGGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: KLYFASSESSKLCDRPTPHRAGR*RPGWHF
Trigger: AAAATGCCACCCTGGCCTCCACCGGCCAGCTCTATG...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAATCTCCACTGACATCTaGTTGTCCAGAGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGISTDI*LSRGQF
Trigger: GAACTGTCCTCTGGACAACCAGATGTCAGTGGAGAT...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAACTCCACTGCCACTTATaGTGCCAGAAGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKLHCHL*CQKPGQ
Trigger: CTGACCTGGCTTCTGGCACCATAAGTGGCAGTGGAG...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCCATGGCCAAGTTCCTaGGAAACAGTGGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVPWPSS*ETVGSV
Trigger: GACTGAACCCACTGTTTCCCAGGAACTTGGCCATGG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAGTCATAGAAGGACCATaGCCAAGTTCCTGGGAAACA +
Preference number: 4 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGVIEGP*PSSWET
Trigger: TGTTTCCCAGGAACTTGGCCATGGTCCTTCTATGAC...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCACAGTCCTCTCCGGTaGCAAAGAAGTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVHSPLR*QRSCQA
Trigger: AGCCTGACAACTTCTTTGCCACCGGAGAGGACTGTG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTTGGGCTGGCACCGGATaGTGGGCACGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCWAGTG*WARGAG
Trigger: TCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCA...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCACG +
Preference number: 4 (lower is better)
Translates to: QTSIPFVQHTKLYFASSEQCPLG*HRMVGT
Trigger: CGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCAGAAGGAAAGCCACTaGGTTCCACAGATCCTAACC +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGQKESH*VPQILT
Trigger: GGTTAGGATCTGTGGAACTCAGTGGCTTTCCTTCTG...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTACACTGCTCATAGCCTaGCTCATAGGCAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLATLLIA*LIGSLE
Trigger: CTCCAAGCTGCCTATGAGGCAGGCTATGAGCAGTGT...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp ACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCGTGCTGGTTTCCATCTaGCCAGACTGCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: TLPLLSPPSSVTALLLPSVLVSI*PDCNVL
Trigger: AAGCACATTGCAGTCTGGGCAGATGGAAACCAGCAC...GGAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCATTCGCCTCTCTCATaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVHSPLS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCATGAGAGAGGCGAATG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAACTTTCTCCTCCAGTTaGAAGTACACTGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWETFSSS*KYTDVL
Trigger: GAGGACATCAGTGTACTTCCAACTGGAGGAGAAAGT...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAGATCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGATCTCC...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAGTCTGGAACTTCTTCTaGGATCACTGCAGCGATGAC +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKVWNFF*DHCSDD
Trigger: GTCATCGCTGCAGTGATCTCAGAAGAAGTTCCAGAC...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KLYFASSESSKLCDRPTPQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAATGCCCTTTTTACACGTaGAGGGCAGCTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQCPFYT*RAAGNC
Trigger: GCAATTACCAGCTGCCCTTCACGTGTAAAAAGGGCA...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp ACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTAGTGTGCATGCAGGCCTaGTGTGCCTCCTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: TLSCTLPLLSPPSSVTALVCMQA*CASSNV
Trigger: GACATTTGAGGAGGCACAGCAGGCCTGCATGCACAC...TAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCCACTGCCACTTATGGTaGCAGAAGCCAGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGHCHLW*QKPGQG
Trigger: CCCCTGACCTGGCTTCTGGCACCATAAGTGGCAGTG...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTTCCATCTGCCCAGACTaGAATGTGCTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLASICPD*NVLRSR
Trigger: TCTGGACCTAAGCACATTGCAGTCTGGGCAGATGGA...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAATCCATCTGCCCAGACTaGAATGTGCTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQSICPD*NVLRSR
Trigger: TCTGGACCTAAGCACATTGCAGTCTGGGCAGATGGA...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAGTGCTGGTTTCCATCTaGCCAGACTGCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQVLVSI*PDCNVL
Trigger: AAGCACATTGCAGTCTGGGCAGATGGAAACCAGCAC...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGAAAGGTCCATGGGTTaGTGTTTACCTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVERSMG*CLPLCL
Trigger: CAAGCACAGAGGTAAACAGCAACCCATGGACCTTTC...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAACGCCACTTCTCAAATTaGAGAGAGTGTCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKRHFSN*RECPSD
Trigger: GTCTGACGGACACTCTCTGCAATTTGAGAAGTGGCG...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp CCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAGAAGGTGAATTTCTCTaGGGATGTCGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PLTSHPVPALVPGKARWEEGEFL*GCRIKD
Trigger: GTCTTTTATGCGACATCCCCAGAGAAATTCACCTTC...TTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACTGCTCGAGGCGTGTaGCGAAGAACACTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGTARGV*RRTLPP
Trigger: AGGGGGAAGTGTTCTTCGCCACACGCCTCGAGCAGT...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCGTGTTCCTCTGCTGCTaGGAGGGTGGGAAGCCATGT +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGVFLCC*EGGKPC
Trigger: ACATGGCTTCCCACCCTCCCAGCAGCAGAGGAACAC...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCACAAGGGAGACAGTTaGAAAGCCAGATGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YFASSESSKLCDRPTPPFHKGDS*KARWKS
Trigger: GGACTTCCATCTGGCTTTCCAACTGTCTCCCTTGTG...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp GACAAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTCATCTGTCAGGGACATaGTTGTTTCTGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DKKRQEDTMWVGCTVSLAHLSGT*LFLLSG
Trigger: CCCAGACAGCAGAAACAACCATGTCCCTGACAGATG...AGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACTTTCAATGCCCCCTaGAGGCTGCCCACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVTFNAP*RLPTGV
Trigger: GACTCCAGTGGGCAGCCTTCAGGGGGCATTGAAAGT...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAACTGAGTTCAGTTCCTaGAGGGAGACCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKTEFSS*RETTNV
Trigger: GACATTAGTGGTCTCCCTTCAGGAACTGAACTCAGT...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR TCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATTCAGACAAGGGCTTaGGAGGCACTCGTCAATGTC +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTIQTRA*EALVNV
Trigger: GACATTGACGAGTGCCTCTCAAGCCCTTGTCTGAAT...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTCAAAGATGGGCTTTaGTGTAAGGATCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTVKDGL*CKDHAA
Trigger: GGCAGCGTGATCCTTACAGCAAAGCCCATCTTTGAC...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAGCAGAAGTGATTCCATaGAGATCTGGGAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQAEVIP*RSGNSD
Trigger: GTCTGAGTTCCCAGATCTGCATGGAATCACTTCTGC...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAGCAGAAGTGATTCCATaGAGATCTGGGAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKAEVIP*RSGNSD
Trigger: GTCTGAGTTCCCAGATCTGCATGGAATCACTTCTGC...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR GCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCCACCCCTCCTCACATTaGTCCTGGTCTGCAACGGTT +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGHPSSH*SWSATV
Trigger: AACCGTTGCAGACCAGGAGCAATGTGAGGAGGGGTG...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCATTCGCCTCTCTCATaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: KLYFASSESSKLCDRPTPHSPLS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCATGAGAGAGGCGAATG...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCGAACCTGTCCTTCAGTaGCCACCAGCAGTACCACCT +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGEPVLQ*PPAVPP
Trigger: AGGTGGTACTGCTGGTGGCCACTGAAGGACAGGTTC...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCACTTCTGTTGTCTTTaGCTCCAAGGGGACAGCATC +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTHFCCL*LQGDSI
Trigger: GATGCTGTCCCCTTGGAGCCAAAGACAACAGAAGTG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAGTTGTTTCTGCTGTCTaGGTCTCCTCTCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKVVSAV*VSSPEY
Trigger: ATACTCAGGAGAGGAGACCCAGACAGCAGAAACAAC...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCAAGAAGTTGTCAGGCTaGTTTGGACGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: YFASSESSKLCDRPTPPFKKLSG*FGRHFS
Trigger: TGAGAAGTGGCGTCCAAACCAGCCTGACAACTTCTT...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAAAAGAAGTTGTCAGGCTaGTTTGGACGCCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSHPVPALVPGKARWEIKKKLSG*FGRHFS
Trigger: TGAGAAGTGGCGTCCAAACCAGCCTGACAACTTCTT...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTAAGCCCTCAGTGCACTaGTACCGCACCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCKPSVH*YRTREL
Trigger: CAGCTCCCTGGTGCGGTACCAGTGCACTGAGGGCTT...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGTTCTGTGTGTTCCTCTaGTGCTGGGAGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVFCVFL*CWEGGK
Trigger: CTTCCCACCCTCCCAGCAGCAGAGGAACACACAGAA...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTGAAGGCCACTTTCAATaGCCCCTGAAGGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCEGHFQ*PLKAAH
Trigger: GTGGGCAGCCTTCAGGGGGCATTGAAAGTGGCCTTC...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCTCAGTGGTGAAATATaGCACTTCTGTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVLSGEI*HFCCLW
Trigger: CCAAAGACAACAGAAGTGCCATATTTCACCACTGAG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp ACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCTCCAGATCTGTTTCATaGAAGGCAGAAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: TLPLLSPPSSVTALLLPSSRSVS*KAEVIP
Trigger: TGGAATCACTTCTGCCTTCCATGAAACAGATCTGGA...GGAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCTCCAGATCTGTTTCATaGAAGGCAGAAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGSRSVS*KAEVIP
Trigger: TGGAATCACTTCTGCCTTCCATGAAACAGATCTGGA...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR TCA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAGCCATCAAATGCTCCTaGGGGCAAGCTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPAIKCS*GQAAPS
Trigger: ACTGGGAGCAGCTTGCCCTCAGGAGCATTTGATGGC...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGAGTGTCCAGACCTTCTaGTTCAGTAGGAAACACACT +
Preference number: 4 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTSVQTF*FSRKHT
Trigger: AGTGTGTTTCCTACTGAAGCAGAAGGTCTGGACACT...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGGTCAGGGGTTCTGGTTaGTGTTCCACTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVVRGSG*CSTEHW
Trigger: CCAGTGTTCAGTGGAACAGCAACCAGAACCCCTGAC...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTACTCAGACAGTTTACTaGTGGCCTCAGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCTQTVY*WPQGQQ
Trigger: CTGCTGCCCCTGAGGCCAGCAGTAAACTGTCTGAGT...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTAATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCTTGGAGCGAAGGTTCTaGATCTCCAAGGTAGCATCG +
Preference number: 4 (lower is better)
Translates to: FNLTPYFSPCPCTGPWKGLERRF*ISKVAS
Trigger: CGATGCTACCTTGGAGATCCAGAACCTTCGCTCCAA...GCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGATGGCTCCTCTGAGGTaGAAGGGACTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QTSIPFVQHTKLYFASSEMAPLR*KGLLRQ
Trigger: CTGCCTCAGCAGTCCCTTCCACCTCAGAGGAGCCAT...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTCTCAGCTACTCCACTTaGGAGGCCACTGAACTCTGG +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCLSYST*EATELW
Trigger: CCAGAGTTCAGTGGCCTCCCAAGTGGAGTAGCTGAG...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR CAA 72 bp CCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTaGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCC +
Preference number: 4 (lower is better)
Translates to: PQFLLSNTLSCT*PLLSPPSSVTA
Trigger: GGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAACCAGGGACTTCAGCTaGACCTGGAGAGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPTRDFS*TWRDGH
Trigger: GTGACCATCTCTCCAGGTGCAGCTGAAGTCCCTGGT...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTCATGCAGGCCTGCTGTaGCTCCTCAAATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCHAGLL*LLKCQR
Trigger: TCTCTGACATTTGAGGAGGCACAGCAGGCCTGCATG...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCTTCAATGGGGATaGTTGAGGGATGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCDLQWG*LRDAHA
Trigger: AGCGTGAGCATCCCTCAACCATCCCCATTGAAGGTC...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGGGAGGCCGGTTTGGTTaGGGTAGAGGTAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: QTSIPFVQHTKLYFASSEGGRFG*GRGRQF
Trigger: GAACTGTCTACCTCTACCCCAACCAAACCGGCCTCC...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTCGGAAGCAGAAGGCATaGTGCTTTGACAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCRKQKA*CFDSGS
Trigger: TGACCCACTGTCAAAGCACCATGCCTTCTGCTTCCG...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCACCAACTGTGGGAGTATaGGACCAGGGGACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPPTVGV*DQGTSP
Trigger: TGGAGAAGTCCCCTGGTCCCATACTCCCACAGTTGG...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTCCATGGCCAAGTTCCTaGGAAACAGTGGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCPWPSS*ETVGSV
Trigger: GACTGAACCCACTGTTTCCCAGGAACTTGGCCATGG...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTCACAGTCCTCTCCGGTaGCAAAGAAGTTGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCHSPLR*QRSCQA
Trigger: AGCCTGACAACTTCTTTGCCACCGGAGAGGACTGTG...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTCTGAGACAAGTCCACTaGCATCAAATGCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCLRQVH*HQMLLR
Trigger: CCTCAGGAGCATTTGATGGCAGTGGACTTGTCTCAG...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTGCCACTTCCAATGTCTaGTCCAGAATACTCACCACT +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCATSNV*SRILTT
Trigger: AGTGGTGAGTATTCTGGAGCAGACATTGGAAGTGGC...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGCTCAGTGAGTTGTCATaGTCTGGAACTTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVLSELS*SGTSSE
Trigger: CTCAGAAGAAGTTCCAGACCATGACAACTCACTGAG...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTGTCAGAGGGTGATGTaGGTGTACTACCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QTSIPFVQHTKLYFASSECQRVM*VYYPLL
Trigger: AAGAAGGGGGTAGTACACCCACATCACCCTCTGACA...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCACATCTGTCAGGGACATaGTTGTTTCTGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPHLSGT*LFLLSG
Trigger: CCCAGACAGCAGAAACAACCATGTCCCTGACAGATG...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
3UTR CAA 72 bp TCCTTCCCTCACAGATGGCACAGACCTCAATTCCTTTaGTCCAACACACTAAGCTGTACTTTGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SFPHRWHRPQFL*SNTLSCTLPLL
Trigger: CAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR GCA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGGAAAGGTCCATGGGTTaGTGTTTACCTCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QTSIPFVQHTKLYFASSEERSMG*CLPLCL
Trigger: CAAGCACAGAGGTAAACAGCAACCCATGGACCTTTC...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTAGTTGGAAAGCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCSWKAR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGCTTTCCAACT...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCACTACAAGAGACACAGTaGGGAAACCTGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPLQETQ*GNLRQV
Trigger: GACTTGTCTCAGGTTTCCCCACTGTGTCTCTTGTAG...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTCAGTTGTGGCAGCTATaGATTCTCCACTTACATCAG +
Preference number: 4 (lower is better)
Translates to: FVQHTKLYFASSESSKLCQLWQL*ILHLHQ
Trigger: CTGATGTAAGTGGAGAATCCATAGCTGCCACAACTG...ACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGCCCGAAGAAGTTTTCTaGGATGTCTACAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVPEEVF*DVYKIF
Trigger: GAAGATTTTGTAGACATCCCAGAAAACTTCTTCGGG...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CCA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTTTCAGTCTGTTTTCTTaGCTCAGTGGTGAAATATGG +
Preference number: 4 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCFSLFS*LSGEIW
Trigger: CCATATTTCACCACTGAGCCAAGAAAACAGACTGAA...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GGGTCTGTGCAGGTGATTCGAGGCTCTTCCCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCACGTGGCGCTGGACAAAGCCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: GSVQVIRGSSQCPLG*HRMVGTWRWTKPSV
Trigger: CACTGAGGGCTTTGTCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAGAGCCTCGAATCACCTGCACAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp TGCTGCTGGGAGGGTGGGAAGCCATGTGGGAGGGATCCCTGGCTGTaGGGATGTGCCCACTGGGGTGTAGGCTGGCTCCCATTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: CCWEGGKPCGRDPWL*GCAHWGVGWLPFSL
Trigger: CAGACTGAATGGGAGCCAGCCTACACCCCAGTGGGCACATCCCCACAGCCAGGGATCCCTCCCACATGGCTTCCCACCCTCCCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGAAACACGGCTCCACTaGATTCTTGGGGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWETRLH*ILGVRG
Trigger: CCCCCTCACCCCAAGAATCAAGTGGAGCCGTGTTTC...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp TCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCTAGGTTGCCCCCGCAGTaGGGCCGAGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SLGEGSAFSSASLSLPQARLPPQ*GRALEM
Trigger: CATCTCCAAGGCTCGGCCCAACTGCGGGGGCAACCT...AGCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCCTTACACCCAGGAGGTaGCCCCCGCAGTTGGGCCGA +
Preference number: 5 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTLTPRR*PPQLGR
Trigger: TCGGCCCAACTGCGGGGGCAACCTCCTGGGTGTAAG...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGCCTGGGCTGCTGTCTTaGTCACCCACACATGGGGTT +
Preference number: 5 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWPGLLS*SPTHGV
Trigger: AACCCCATGTGTGGGTGACAAAGACAGCAGCCCAGG...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GGCCTCTCCCTCTGTGACATTACGGGGCAGGGGCAGCTCCAGGTCTaGCCAGGTCACCGTCTGGATGGTGATGTCGTCTTCACCACCCAC +
Preference number: 5 (lower is better)
Translates to: GLSLCDITGQGQLQV*PGHRLDGDVVFTTH
Trigger: GTGGGTGGTGAAGACGACATCACCATCCAGACGGTGACCTGGCCAGACCTGGAGCTGCCCCTGCCCCGTAATGTCACAGAGGGAGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CAGAGGCAGAGGGGCTTTCTGTGTGTTCCTCTGCTGCTGGGAGGGTaGGAAGCCATGTGGGAGGGATCCCTGGCTGTGGGGATGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QRQRGFLCVPLLLGG*EAMWEGSLAVGMCP
Trigger: TGGGCACATCCCCACAGCCAGGGATCCCTCCCACATGGCTTCCCACCCTCCCAGCAGCAGAGGAACACACAGAAAGCCCCTCTGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp CTGTCTGGTTGGCGTGTAGATAGACAGTCCTTACACCCAGGAGGTTaGCCCCGCAGTTGGGCCGAGCCTTGGAGATGGGGTAGCGCACGC +
Preference number: 5 (lower is better)
Translates to: LSGWRVDRQSLHPGG*PRSWAEPWRWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCTCGGCCCAACTGCGGGGGCAACCTCCTGGGTGTAAGGACTGTCTATCTACACGCCAACCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp AGGCAGAGGCAGAGCCTTCGGGGCTCTCACCTCCAGAGGGCAACCTaGCAACTGTGGGAGTATGGGACCAGGGGACTTCTCCATCTCCTG +
Preference number: 5 (lower is better)
Translates to: RQRQSLRGSHLQRAT*QLWEYGTRGLLHLL
Trigger: CAGGAGATGGAGAAGTCCCCTGGTCCCATACTCCCACAGTTGGCAGGTTGCCCTCTGGAGGTGAGAGCCCCGAAGGCTCTGCCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGACCACCTCCTTTTCCTaGGAAACACGGCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWTTSFS*ETRLHL
Trigger: CAAGTGGAGCCGTGTTTCCAAGGAAAAGGAGGTGGT...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp GGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGGCACATTCCTTCTCCAGCTTCTaGAGCAGTAGGAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GGMHGQPGWPLGSASWAHSFSSF*SSRSLS
Trigger: ACTCAGGCTCCTACTGCTCAAGAAGCTGGAGAAGGA...ATGTGCCCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 90 bp GGGTGGCATTTTGAGCCGCACAGAAGGCCCGCGCTTCCTGGAAGGTaGACTGCTCGAGGCGTGTGGCGAAGAACACTTCCCCCTCAAGCT +
Preference number: 5 (lower is better)
Translates to: GWHFEPHRRPALPGR*TARGVWRRTLPPQA
Trigger: AGCTTGAGGGGGAAGTGTTCTTCGCCACACGCCTCGAGCAGTTCACCTTCCAGGAAGCGCGGGCCTTCTGTGCGGCTCAAAATGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CAGAGCCTTCGGGGCTCTCACCTCCAGAGGGCAACCTGCCAACTGTaGGAGTATGGGACCAGGGGACTTCTCCATCTCCTGAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QSLRGSHLQRATCQL*EYGTRGLLHLLRQN
Trigger: GTTCTGCCTCAGGAGATGGAGAAGTCCCCTGGTCCCATACTCCCACAGTTGGCAGGTTGCCCTCTGGAGGTGAGAGCCCCGAAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGCTCACGCTCAGTGAGTaGTCATGGTCTGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: PCGWDARSAWLAAGLSILLTLSE*SWSGTS
Trigger: AGAAGTTCCAGACCATGACAACTCACTGAGCGTGAG...CAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp ACCAGGCCCCACCTGAGTGACGATCCAGTCCTCTATGTCAGAGGGTaGTGTGGGTGTACTACCCCCTTCTTCTCCTGGAGAGGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: TRPHLSDDPVLYVRG*CGCTTPFFSWRGRH
Trigger: GTGGCGCCCTCTCCAGGAGAAGAAGGGGGTAGTACACCCACATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTGGGGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp CTCAGGAGAGGCAATGACGGCCCCGGTGTGCATGCAGGCCTGCTGTaGCTCCTCAAATGTCAGAGAGTATCTGGTGGAGCCTGGGCGATA +
Preference number: 5 (lower is better)
Translates to: LRRGNDGPGVHAGLL*LLKCQRVSGGAWAI
Trigger: TATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCCTGCATGCACACCGGGGCCGTCATTGCCTCTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GGCCTGCTGTGCCTCCTCAAATGTCAGAGAGTATCTGGTGGAGCCTaGGCGATAGTGGAATACAACTCCCCCTGGCAAGCGGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: GLLCLLKCQRVSGGA*AIVEYNSPWQAGLT
Trigger: GGTCAGCCCCGCTTGCCAGGGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GCCGTAGGTCCTGACTCCTGGGCTGCTGTCTTTGTCACCCACACATaGGGTTCGTGGGCTCACAATGGGGTATCTGACGGTCTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: AVGPDSWAAVFVTHT*GSWAHNGVSDGLVL
Trigger: CAGGACCAGACCGTCAGATACCCCATTGTGAGCCCACGAACCCCATGTGTGGGTGACAAAGACAGCAGCCCAGGAGTCAGGACCTACGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GGGAAGCCATGTGGGAGGGATCCCTGGCTGTGGGGATGTGCCCACTaGGGTGTAGGCTGGCTCCCATTCAGTCTGTTTTCTTGGCTCAGT +
Preference number: 5 (lower is better)
Translates to: GKPCGRDPWLWGCAH*GVGWLPFSLFSWLS
Trigger: ACTGAGCCAAGAAAACAGACTGAATGGGAGCCAGCCTACACCCCAGTGGGCACATCCCCACAGCCAGGGATCCCTCCCACATGGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGAGGAGATCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RQEDTMWVGCTVSLAGRWRRSRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGATCTCCT...CCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGTCCACTGACATCTGGTaGTCCAGAGGACAGTTCATT +
Preference number: 5 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWSTDIW*SRGQFI
Trigger: AATGAACTGTCCTCTGGACAACCAGATGTCAGTGGA...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCCGCTGGGCTCAGCATCCTGGAGTTGTCAGGCTGGTTaGGACGCCACTTCTCAAATT +
Preference number: 5 (lower is better)
Translates to: HVGGMHGQPGWPLGSASWSCQAG*DATSQI
Trigger: AATTTGAGAAGTGGCGTCCAAACCAGCCTGACAACT...CCAGGATGCTGAGCCCAGCGGCCAGCCAGGCTGACCGTGCATCCCACCCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 90 bp TCTCCACTCACTTCCGGAGCGGCCGATCCCTCCCTGGTGCCTTCCTaGAAGGTCCATGGGTTGCTGTTTACCTCTGTGCTTGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SPLTSGAADPSLVPS*KVHGLLFTSVLGVV
Trigger: GACAACCCCAAGCACAGAGGTAAACAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCGCTCCGGAAGTGAGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 90 bp TCAAGGTCACCTGAGGGAAGGCCACTTTCAATGCCCCCTGAAGGCTaGCCACTGGAGTCAAGGCGTCCTGAAGCATCTCCACTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SRSPEGRPLSMPPEG*PLESRRPEASPLPV
Trigger: CACAGGCAGTGGAGATGCTTCAGGACGCCTTGACTCCAGTGGGCAGCCTTCAGGGGGCATTGAAAGTGGCCTTCCCTCAGGTGACCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp AGAGTATCTGGTGGAGCCTGGGCGATAGTGGAATACAACTCCCCCTaGCAAGCGGGGCTGACCAGGGACTTCAGCTGCACCTGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: RVSGGAWAIVEYNSP*QAGLTRDFSCTWRD
Trigger: ATCTCTCCAGGTGCAGCTGAAGTCCCTGGTCAGCCCCGCTTGCCAGGGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp GCATGCAGGCCTGCTGTGCCTCCTCAAATGTCAGAGAGTATCTGGTaGAGCCTGGGCGATAGTGGAATACAACTCCCCCTGGCAAGCGGG +
Preference number: 5 (lower is better)
Translates to: ACRPAVPPQMSESIW*SLGDSGIQLPLASG
Trigger: CCCGCTTGCCAGGGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCCTGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp GGAGCACCCCTGGGAAGGAAGTGCCCCTACCCAGTCCAGCCGAGAAATGACACCTCCTTCTCCAGCTTCTaGAGCAGTAGGAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GAPLGRKCPYPVQPRNDTSFSSF*SSRSLS
Trigger: ACTCAGGCTCCTACTGCTCAAGAAGCTGGAGAAGGA...GGTGTCATTTCTCGGCTGGACTGGGTAGGGGCACTTCCTTCCCAGGGGTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp GGAAGCCATCCTCATAGGCAGCCTGCAGTTGTTCTGGGGTGGCGATaGTGGCGCTGTTCTGTAGGCAAGCCCGCTGTGCTCGATCAAAGT +
Preference number: 5 (lower is better)
Translates to: GSHPHRQPAVVLGWR*WRCSVGKPAVLDQS
Trigger: ACTTTGATCGAGCACAGCGGGCTTGCCTACAGAACAGCGCCATCATCGCCACCCCAGAACAACTGCAGGCTGCCTATGAGGATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp AGGCAGAACCACTTTCTACAGGCAGGCCTGAGCTCACTGTGGGGCTaGGGCCACTGGAGTCAAGGTCACCTGAGGGAAGGCCACTTTCAA +
Preference number: 5 (lower is better)
Translates to: RQNHFLQAGLSSLWG*GHWSQGHLREGHFQ
Trigger: TTGAAAGTGGCCTTCCCTCAGGTGACCTTGACTCCAGTGGCCTCAGCCCCACAGTGAGCTCAGGCCTGCCTGTAGAAAGTGGTTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp AACTCCTGTTCCTCAGGAGTGACAATGCTGCTCAGATGTGACTGCTaGTCCCGACACCGTCTCTCCGCATCCACCCAGGTCTCTCGGTCA +
Preference number: 5 (lower is better)
Translates to: NSCSSGVTMLLRCDC*SRHRLSASTQVSRS
Trigger: TGACCGAGAGACCTGGGTGGATGCGGAGAGACGGTGTCGGGAGCAGCAGTCACATCTGAGCAGCATTGTCACTCCTGAGGAACAGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp AGAAGGCATGGTGCTTTGACAGTGGGTCAGGGAGGCCGGTTTGGTTaGGGTAGAGGTAGACAGTTCTCACGCCAGGTTTGTCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: RRHGALTVGQGGRFG*GRGRQFSRQVCPHH
Trigger: GTGGTGGGGACAAACCTGGCGTGAGAACTGTCTACCTCTACCCCAACCAAACCGGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp AAAAAGCGACAAGAAGACACCATGTGGGTGGGATGCACGGTCAGCCTGGCTGGCAGAAGGCATGGTGCTTaGACAGTGGGTCAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: KKRQEDTMWVGCTVSLAGRRHGA*TVGQGG
Trigger: GCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCT...GCCAGCCAGGCTGACCGTGCATCCCACCCACATGGTGTCTTCTTGTCGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp GTCCCTAGGAGAGGGCTCTGCCTTCTCTTCAGCCAGCCTGTCCCTACCCCAGGCAATATGGCACTTCTGTaGTCTTTGGCTCCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VPRRGLCLLFSQPVPTPGNMALL*SLAPRG
Trigger: TCCCCTTGGAGCCAAAGACAACAGAAGTGCCATATT...GCCTGGGGTAGGGACAGGCTGGCTGAAGAGAAGGCAGAGCCCTCTCCTAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp TTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGCCACCCCTCCTCACATaGCTCCTGGTCGATCTCACA +
Preference number: 5 (lower is better)
Translates to: LTPYFSPCPCTGPWKGTVPPLLT*LLVDLT
Trigger: TGTGAGATCGACCAGGAGCAATGTGAGGAGGGGTGG...CACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS TCA 90 bp TCTTTGGCTCCAAGGGGACAGCATCCACACCAGGCCCCACCTGAGTaGCGATCCAGTCCTCTATGTCAGAGGGTGATGTGGGTGTACTAC +
Preference number: 5 (lower is better)
Translates to: SLAPRGQHPHQAPPE*RSSPLCQRVMWVYY
Trigger: GTAGTACACCCACATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTGGGGCCTGGTGTGGATGCTGTCCCCTTGGAGCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp GTTGTCTTTGGCTCCAAGGGGACAGCATCCACACCAGGCCCCACCTaGGTGACGATCCAGTCCTCTATGTCAGAGGGTGATGTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: VVFGSKGTASTPGPT*VTIQSSMSEGDVGV
Trigger: TACACCCACATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTGGGGCCTGGTGTGGATGCTGTCCCCTTGGAGCCAAAGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp AGATGGCGTCATATCGGGATGAGGGATCAGGATAGCCTGTCTGGTTaGCGTGTAGATAGACAGTCCTTACACCCAGGAGGTTGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: RWRHIGMRDQDSLSG*RVDRQSLHPGGCPR
Trigger: GCGGGGGCAACCTCCTGGGTGTAAGGACTGTCTATCTACACGCCAACCAGACAGGCTATCCTGATCCCTCATCCCGATATGACGCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp TGTGCATGCAGGCCTGCTGTGCCTCCTCAAATGTCAGAGAGTATCTaGTGGAGCCTGGGCGATAGTGGAATACAACTCCCCCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: CACRPAVPPQMSESI*WSLGDSGIQLPLAS
Trigger: GCTTGCCAGGGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCCTGCATGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CAGACACTCCCACACCAGCCTCAGGGTAAGCAGACAGGTCACTGCTaGCTTCTGGGACTGAAGCTTCTATCCCAGACCCTGGGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: QTLPHQPQGKQTGHC*LLGLKLLSQTLGSL
Trigger: CAAACTTCCCAGGGTCTGGGATAGAAGCTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTGCTTACCCTGAGGCTGGTGTGGGAGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp CAACGGTTGACTCCGTCTCCCCTGACCCTTCTGAAGAAGAGAGGGTaGGGGCATCTGTCAGGGACATGGTTGTTTCTGCTGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: QRLTPSPLTLLKKRG*GHLSGTWLFLLSGS
Trigger: AGACCCAGACAGCAGAAACAACCATGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAGAAGGGTCAGGGGAGACGGAGTCAACCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp ACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCATAGGCAGCCTGCAGTaGTTCTGGGGTGGCGATGAT +
Preference number: 5 (lower is better)
Translates to: TLPLLSPPSSVTALLLPSIGSLQ*FWGGDD
Trigger: ATCATCGCCACCCCAGAACAACTGCAGGCTGCCTAT...GGAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCCCGGTGGCAAAGAAGTaGTCAGGCTGGTTTGGACGC +
Preference number: 5 (lower is better)
Translates to: YFASSESSKLCDRPTPPFPVAKK*SGWFGR
Trigger: GCGTCCAAACCAGCCTGACAACTTCTTTGCCACCGG...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp TGGCTGGATAGTTGGGGAGCGACACCTTGTCTTGGTAGATGCTGTTaGCTCGAACCTGTCCTTCAGTGGCCACCAGCAGTACCACCTCCT +
Preference number: 5 (lower is better)
Translates to: WLDSWGATPCLGRCC*LEPVLQWPPAVPPP
Trigger: AGGAGGTGGTACTGCTGGTGGCCACTGAAGGACAGGTTCGAGTCAACAGCATCTACCAAGACAAGGTGTCGCTCCCCAACTATCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp TGTCCAATTCACCCAGGGGCAGCCCTGATACTTCTCCTGAACCACTaGTGCCAATGGTCCCCCTTCCTTCCAGTTCACTGGAAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CPIHPGAALILLLNH*CQWSPFLPVHWKWW
Trigger: CCACCACTTCCAGTGAACTGGAAGGAAGGGGGACCATTGGCATCAGTGGTTCAGGAGAAGTATCAGGGCTGCCCCTGGGTGAATTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp TGGGTCTCCTCTCCTGAGTATGAGGGATTTGGGGATTCGATTTCTTaGAGTGTCTCTGTAGGGTACCGGGTAGGCTGGGCCCACTCGGAC +
Preference number: 5 (lower is better)
Translates to: WVSSPEYEGFGDSIS*SVSVGYRVGWAHSD
Trigger: GTCCGAGTGGGCCCAGCCTACCCGGTACCCTACAGAGACACTTCAAGAAATCGAATCCCCAAATCCCTCATACTCAGGAGAGGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp GGAGCGAAGGTTCTGGATCTCCAAGGTAGCATCGCTGGGGATGGCTaGATAGTTGGGGAGCGACACCTTGTCTTGGTAGATGCTGTTGAC +
Preference number: 5 (lower is better)
Translates to: GAKVLDLQGSIAGDG*IVGERHLVLVDAVD
Trigger: GTCAACAGCATCTACCAAGACAAGGTGTCGCTCCCCAACTATCCAGCCATCCCCAGCGATGCTACCTTGGAGATCCAGAACCTTCGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CCACTGGCCTCAAAGAGCCGGGGAGTGTATGTCATAGAAGGACCATaGCCAAGTTCCTGGGAAACAGTGGGTTCAGTCACACCCTCCACT +
Preference number: 5 (lower is better)
Translates to: PLASKSRGVYVIEGP*PSSWETVGSVTPST
Trigger: AGTGGAGGGTGTGACTGAACCCACTGTTTCCCAGGAACTTGGCCATGGTCCTTCTATGACATACACTCCCCGGCTCTTTGAGGCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp TTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGAGCCTCCGGCACTCGTaGGCTGCCTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LSNTLSCTLPLLSPPSSVSLRHS*AASWKV
Trigger: CACCTTCCAGGAGGCAGCCAACGAGTGCCGGAGGCT...CACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp AATTTAACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGCCGGTGGCAAAGAAGTaGTCAGGCTGGTTTGGACGC +
Preference number: 5 (lower is better)
Translates to: NLTPYFSPCPCTGPWKGTPVAKK*SGWFGR
Trigger: GCGTCCAAACCAGCCTGACAACTTCTTTGCCACCGG...CGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGTTAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 90 bp GGGATGGTGAGGGAAGACCCTAGGAGGACCTTCAATGGGGATGGTTaGGGGATGCTCACGCTCAGTGAGTTGTCATGGTCTGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: GMVREDPRRTFNGDG*GMLTLSELSWSGTS
Trigger: AGAAGTTCCAGACCATGACAACTCACTGAGCGTGAGCATCCCTCAACCATCCCCATTGAAGGTCCTCCTAGGGTCTTCCCTCACCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp GCCACTGAACTCTGGAGTGGGGGATGTGAGTCCACTGGAATCAATTaGTCCAGAAGATTGTTCACTGACGTCCACCGTCCCAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: ATELWSGGCESTGIN*SRRLFTDVHRPRCA
Trigger: GGCACATCTGGGACGGTGGACGTCAGTGAACAATCTTCTGGAGCAATTGATTCCAGTGGACTCACATCCCCCACTCCAGAGTTCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp CACCCTCCATCTCCTCAGCGAAGCAGTACACATCATAGGTCTCATTaGTGTCCCGGATTCCGTAGGTTCTCACTCCAGGGAACTCGTCCT +
Preference number: 5 (lower is better)
Translates to: HPPSPQRSSTHHRSH*CPGFRRFSLQGTRP
Trigger: AGGACGAGTTCCCTGGAGTGAGAACCTACGGAATCCGGGACACCAATGAGACCTATGATGTGTACTGCTTCGCTGAGGAGATGGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CTGACCCTTCTGAAGAAGAGAGGGTGGGGGCATCTGTCAGGGACATaGTTGTTTCTGCTGTCTGGGTCTCCTCTCCTGAGTATGAGGGAT +
Preference number: 5 (lower is better)
Translates to: LTLLKKRGWGHLSGT*LFLLSGSPLLSMRD
Trigger: ATCCCTCATACTCAGGAGAGGAGACCCAGACAGCAGAAACAACCATGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAGAAGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAATTTCCCCACTGCCAGTaGTGGCAGCTATGGATTCTC +
Preference number: 5 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQFPHCQ*WQLWIL
Trigger: GAGAATCCATAGCTGCCACAACTGGCAGTGGGGAAA...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp ACCCCTTACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGATGTTTACCTCTGTGCTaGGGGTTGTCATTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: TPYFSPCPCTGPWKGTVGCLPLC*GLSFPD
Trigger: ATCTGGAAATGACAACCCCAAGCACAGAGGTAAACA...TCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 90 bp CCACTCGGACTCTGTGATGGTGCTGCTGATGGCAACATTCACCTCTaGGGTGTGATCAGACCATTCTCCGCTGATTTCAGTCCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PLGLCDGAADGNIHL*GVIRPFSADFSPVS
Trigger: GGAGACAGGACTGAAATCAGCGGAGAATGGTCTGATCACACCTCAGAGGTGAATGTTGCCATCAGCAGCACCATCACAGAGTCCGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 90 bp CGATCTCACACAGGTTCCCTCTGTAGCTCGGAAGGCATAAGCATGTaGAAGTGTCCAAGGCATCCACGCAGGTGGCTCCATTCAGACAAG +
Preference number: 5 (lower is better)
Translates to: RSHTGSLCSSEGISM*KCPRHPRRWLHSDK
Trigger: CTTGTCTGAATGGAGCCACCTGCGTGGATGCCTTGGACACTTTCACATGCTTATGCCTTCCGAGCTACAGAGGGAACCTGTGTGAGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS CCA 90 bp TTCACCACTGACCTCAGCTACTCCACTTGGGAGGCCACTGAACTCTaGAGTGGGGGATGTGAGTCCACTGGAATCAATTGCTCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: FTTDLSYSTWEATEL*SGGCESTGINCSRR
Trigger: TCTTCTGGAGCAATTGATTCCAGTGGACTCACATCCCCCACTCCAGAGTTCAGTGGCCTCCCAAGTGGAGTAGCTGAGGTCAGTGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp TCCAGAGACCCAGAAAGCTCCCCAGATATGTCTGGTGTCCCAGAATaGGCACCACTGAATTCCAAAATGCCCGAAGGTCCTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRDPESSPDMSGVPE*APLNSKMPEGPSPA
Trigger: AGCTGGAGAAGGACCTTCGGGCATTTTGGAATTCAGTGGTGCCCATTCTGGGACACCAGACATATCTGGGGAGCTTTCTGGGTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp AAGAGCCGGGGAGTGTATGTCATAGAAGGACCATGGCCAAGTTCCTaGGAAACAGTGGGTTCAGTCACACCCTCCACTAACTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: KSRGVYVIEGPWPSS*ETVGSVTPSTNSEV
Trigger: CACCTCAGAGTTAGTGGAGGGTGTGACTGAACCCACTGTTTCCCAGGAACTTGGCCATGGTCCTTCTATGACATACACTCCCCGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp ACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAACATTCAGACAAGGGCTaGAGAGGCACTCGTCAATGT +
Preference number: 5 (lower is better)
Translates to: TSHPVPALVPGKARWEIKHSDKG*RGTRQC
Trigger: ACATTGACGAGTGCCTCTCAAGCCCTTGTCTGAATG...TTTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS TCA 90 bp TGCCAATGGTCCCCCTTCCTTCCAGTTCACTGGAAGTGGTGGCTGTaGTCACTTCCACTAAGGTACTGTCCACAAGGGAGACAGTTGGAA +
Preference number: 5 (lower is better)
Translates to: CQWSPFLPVHWKWWL*SLPLRYCPQGRQLE
Trigger: TTCCAACTGTCTCCCTTGTGGACAGTACCTTAGTGGAAGTGATCACAGCCACCACTTCCAGTGAACTGGAAGGAAGGGGGACCATTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp GACTCTGTGATGGTGCTGCTGATGGCAACATTCACCTCTGAGGTGTaGTCAGACCATTCTCCGCTGATTTCAGTCCTGTCTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: DSVMVLLMATFTSEV*SDHSPLISVLSPEA
Trigger: GGCTTCTGGAGACAGGACTGAAATCAGCGGAGAATGGTCTGATCACACCTCAGAGGTGAATGTTGCCATCAGCAGCACCATCACAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp TTCCCTCACAGATGGCACAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTTGCCTCATAGGCAGCTaGGAGCTGCTCAGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: FPHRWHRPQFLLSNTLSCCLIGS*ELLRRG
Trigger: GCCTCTCCTGAGCAGCTCCAAGCTGCCTATGAGGCA...ACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTGTGCCATCTGTGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp TACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTCCCTTCAGTTGTCAGGCTGGTTaGGACGCCACTTCTCAAATT +
Preference number: 5 (lower is better)
Translates to: YFASSESSKLCDRPTPPFSCQAG*DATSQI
Trigger: AATTTGAGAAGTGGCGTCCAAACCAGCCTGACAACT...GAAGGGAGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 90 bp ACTGCTATCAGGAGATCCAGATGCTTGGCCACTGAGTTCAGTTCCTaGAGGGAGACCACTAATGTCCGCACTACTGTCCAATTCACCCAG +
Preference number: 5 (lower is better)
Translates to: TAIRRSRCLATEFSS*RETTNVRTTVQFTQ
Trigger: CTGGGTGAATTGGACAGTAGTGCGGACATTAGTGGTCTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGATCTCCTGATAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp TGTGCCCACTGGGGTGTAGGCTGGCTCCCATTCAGTCTGTTTTCTTaGCTCAGTGGTGAAATATGGCACTTCTGTTGTCTTTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: CAHWGVGWLPFSLFS*LSGEIWHFCCLWLQ
Trigger: TTGGAGCCAAAGACAACAGAAGTGCCATATTTCACCACTGAGCCAAGAAAACAGACTGAATGGGAGCCAGCCTACACCCCAGTGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCAGTCAGGGAGGCCGGTTaGGTTGGGGTAGAGGTAGAC +
Preference number: 5 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPVREAG*VGVEVD
Trigger: GTCTACCTCTACCCCAACCAAACCGGCCTCCCTGAC...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp CAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTCCTCCACCACCCCTCCTCACATaGCTCCTGGTCTGCAACGGT +
Preference number: 5 (lower is better)
Translates to: QFLLSNTLSCTLPLLSPPPPLLT*LLVCNG
Trigger: ACCGTTGCAGACCAGGAGCAATGTGAGGAGGGGTGG...TGGAGGACTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 90 bp TCCACTAAAGTCAGGCAGGCCAGAGGATGGGCCACTTCCAATGTCTaGTCCAGAATACTCACCACTAAATCCAGAGGGAAAGCCATTTAC +
Preference number: 5 (lower is better)
Translates to: STKVRQARGWATSNV*SRILTTKSRGKAIY
Trigger: GTAAATGGCTTTCCCTCTGGATTTAGTGGTGAGTATTCTGGAGCAGACATTGGAAGTGGCCCATCCTCTGGCCTGCCTGACTTTAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp AAGCTGTACTTTGCCTCTTCTGAGTCCTCCAAGCTCTGTGACCGCCCTACTCCTTGTTTACCTCTGTGCTaGGGGTTGTCATTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: KLYFASSESSKLCDRPTPCLPLC*GLSFPD
Trigger: ATCTGGAAATGACAACCCCAAGCACAGAGGTAAACA...AGGAGTAGGGCGGTCACAGAGCTTGGAGGACTCAGAAGAGGCAAAGTACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS-3UTR CAA 90 bp TACTTCTCACCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGGTGGGAAATCAAGATCCACTGGTAGTCTaGAGCATTTTTGTTGACGAA +
Preference number: 5 (lower is better)
Translates to: YFSPCPCTGPWKGTVGNQDPLVV*SIFVDE
Trigger: TTCGTCAACAAAAATGCTCAAGACTACCAGTGGATC...TTGATTTCCCACCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGTGAGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 90 bp TTACTTCTGGAGTTTGACCACTTCCTAGAGTTCCAGGAGGTAGTTTaGCAAAGTCCAAGGCCCCAGAAGCAGACCCTACCAAGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LLLEFDHFLEFQEVV*QSPRPQKQTLPSLL
Trigger: AAGAAGACTTGGTAGGGTCTGCTTCTGGGGCCTTGGACTTTGGCAAACTACCTCCTGGAACTCTAGGAAGTGGTCAAACTCCAGAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp CTGTCCACTGCCAAAGAGAATTCCAGACCCATCTCCACTGACATCTaGTTGTCCAGAGGACAGTTCATTAAGCTCAGTCACTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: LSTAKENSRPISTDI*LSRGQFIKLSHSRC
Trigger: ACATCTGGAGTGACTGAGCTTAATGAACTGTCCTCTGGACAACCAGATGTCAGTGGAGATGGGTCTGGAATTCTCTTTGGCAGTGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 90 bp TACATCAGTGGTGCTGGAAAAGTCTCCACTAAAATATGGAGAGCTTaGTGTCTCCGTGCTGGTTTCCATCTGCCCAGACTGCAATGTGCT +
Preference number: 5 (lower is better)
Translates to: YISGAGKVSTKIWRA*CLRAGFHLPRLQCA
Trigger: AGCACATTGCAGTCTGGGCAGATGGAAACCAGCACGGAGACACCAAGCTCTCCATATTTTAGTGGAGACTTTTCCAGCACCACTGATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 90 bp TTCTCCACTTACATCAGTGGTGCTGGAAAAGTCTCCACTAAAATATaGAGAGCTTGGTGTCTCCGTGCTGGTTTCCATCTGCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: FSTYISGAGKVSTKI*RAWCLRAGFHLPRL
Trigger: CAGTCTGGGCAGATGGAAACCAGCACGGAGACACCAAGCTCTCCATATTTTAGTGGAGACTTTTCCAGCACCACTGATGTAAGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS-3UTR CAA 90 bp CAGACCTCAATTCCTTTTGTCCAACACACTAAGCTGTACTTTGCCTCTTCTGAGTTTCCCCACTGCCAGTaGTGGCAGCTATGGATTCTC +
Preference number: 5 (lower is better)
Translates to: QTSIPFVQHTKLYFASSEFPHCQ*WQLWIL
Trigger: GAGAATCCATAGCTGCCACAACTGGCAGTGGGGAAA...CTCAGAAGAGGCAAAGTACAGCTTAGTGTGTTGGACAAAAGGAATTGAGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GAGGCTCTTCCCAGTGCCCGCTGGGCTGGCACCGGATaGTGGGCACGTGGCGCTGGACAAAGCCCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: EALPSARWAGTG*WARGAGQSPQC
Trigger: GCACTGAGGGCTTTGTCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAGAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp GCTCTTCCCAGTGCCCGCTGGGCTGGCACCGGATGGTaGGCACGTGGCGCTGGACAAAGCCCTCAGTGCACT +
Preference number: 6 (lower is better)
Translates to: ALPSARWAGTGW*ARGAGQSPQCT
Trigger: AGTGCACTGAGGGCTTTGTCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp TTGGGGTCTGTGCAGGTGATTCGAGGCTCTTCCCAGTaGCCGCTGGGCTGGCACCGGATGGTGGGCACGTGG +
Preference number: 6 (lower is better)
Translates to: LGSVQVIRGSSQ*PLGWHRMVGTW
Trigger: CCACGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAGAGCCTCGAATCACCTGCACAGACCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp GAGGGTGGGAAGCCATGTGGGAGGGATCCCTGGCTGTaGGGATGTGCCCACTGGGGTGTAGGCTGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: EGGKPCGRDPWL*GCAHWGVGWLP
Trigger: TGGGAGCCAGCCTACACCCCAGTGGGCACATCCCCACAGCCAGGGATCCCTCCCACATGGCTTCCCACCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp CAGGTGATTCGAGGCTCTTCCCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCACGTGGCGCTGGACAAAG +
Preference number: 6 (lower is better)
Translates to: QVIRGSSQCPLG*HRMVGTWRWTK
Trigger: CTTTGTCCAGCGCCACGTGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAAGAGCCTCGAATCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp GGCCAAGCGTGCCCCCAGCCTCCGGCACTCGTTGGCTaGCTCCTGGAAGGTGAATTTCTCTGGGGATGTCGC +
Preference number: 6 (lower is better)
Translates to: GQACPQPPALVG*LLEGEFLWGCR
Trigger: GCGACATCCCCAGAGAAATTCACCTTCCAGGAGGCAGCCAACGAGTGCCGGAGGCTGGGGGCACGCTTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp AGACAGTCCTTACACCCAGGAGGTTGCCCCCGCAGTTaGGCCGAGCCTTGGAGATGGGGTAGCGCACGCTGC +
Preference number: 6 (lower is better)
Translates to: RQSLHPGGCPRS*AEPWRWGSARC
Trigger: GCAGCGTGCGCTACCCCATCTCCAAGGCTCGGCCCAACTGCGGGGGCAACCTCCTGGGTGTAAGGACTGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GGCAGGGGCAGCTCCAGGTCTGGCCAGGTCACCGTCTaGATGGTGATGTCGTCTTCACCACCCACCCCGAAG +
Preference number: 6 (lower is better)
Translates to: GRGSSRSGQVTV*MVMSSSPPTPK
Trigger: CTTCGGGGTGGGTGGTGAAGACGACATCACCATCCAGACGGTGACCTGGCCAGACCTGGAGCTGCCCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GCCGCACAGAAGGCCCGCGCTTCCTGGAAGGTGAACTaGTCGAGGCGTGTGGCGAAGAACACTTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: AAQKARASWKVN*SRRVAKNTSPS
Trigger: TGAGGGGGAAGTGTTCTTCGCCACACGCCTCGAGCAGTTCACCTTCCAGGAAGCGCGGGCCTTCTGTGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GGGCCATGCTGGGGCGGCTCCTCCGTGTGGGTCTCATaGTCCGCTTCTGTAGCCTGTGCTTGTAGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: GPCWGGSSVWVS*SASVACACRCW
Trigger: CCAACACCTACAAGCACAGGCTACAGAAGCGGAGCATGAGACCCACACGGAGGAGCCGCCCCAGCATGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 72 bp AGCATAGAGCTGGCCGGTGGAGGCCAGGGTGGCATTTaGAGCCGCACAGAAGGCCCGCGCTTCCTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: SIELAGGGQGGI*SRTEGPRFLEG
Trigger: ACCTTCCAGGAAGCGCGGGCCTTCTGTGCGGCTCAAAATGCCACCCTGGCCTCCACCGGCCAGCTCTATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp GTAGCCTGTGCTTGTAGGTGTTGGGGTCTGTGCAGGTaGTTCGAGGCTCTTCCCAGTGCCCGCTGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: VACACRCWGLCR*FEALPSARWAG
Trigger: GCCAGCCCAGCGGGCACTGGGAAGAGCCTCGAATCACCTGCACAGACCCCAACACCTACAAGCACAGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp GAAGGCAGTGGCAGAGTCCGGCCCACGTGTGACTTCTaGAGGAAAGCCCCAGGGTCTGGTGGCTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: EGSGRVRPTCDF*RKAPGSGGFSS
Trigger: ACTGGAGAAGCCACCAGACCCTGGGGCTTTCCTGCAGAAGTCACACGTGGGCCGGACTCTGCCACTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GAGGGCGCCACTGACACACCTCGGAAGCAGAAGGCATaGTGCTTTGACAGTGGGTCAGGGAGGCCGGTTTGG +
Preference number: 6 (lower is better)
Translates to: EGATDTPRKQKA*CFDSGSGRPVW
Trigger: CCAAACCGGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCTGCTTCCGAGGTGTGTCAGTGGCGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp AGAGGCAGAGGGGCTTTCTGTGTGTTCCTCTGCTGCTaGGAGGGTGGGAAGCCATGTGGGAGGGATCCCTGG +
Preference number: 6 (lower is better)
Translates to: RGRGAFCVFLCC*EGGKPCGRDPW
Trigger: CCAGGGATCCCTCCCACATGGCTTCCCACCCTCCCAGCAGCAGAGGAACACACAGAAAGCCCCTCTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp TTTGAGCCGCACAGAAGGCCCGCGCTTCCTGGAAGGTaGACTGCTCGAGGCGTGTGGCGAAGAACACTTCCC +
Preference number: 6 (lower is better)
Translates to: FEPHRRPALPGR*TARGVWRRTLP
Trigger: GGGAAGTGTTCTTCGCCACACGCCTCGAGCAGTTCACCTTCCAGGAAGCGCGGGCCTTCTGTGCGGCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp TGGCGTGTAGATAGACAGTCCTTACACCCAGGAGGTTaGCCCCGCAGTTGGGCCGAGCCTTGGAGATGGGGT +
Preference number: 6 (lower is better)
Translates to: WRVDRQSLHPGG*PRSWAEPWRWG
Trigger: ACCCCATCTCCAAGGCTCGGCCCAACTGCGGGGGCAACCTCCTGGGTGTAAGGACTGTCTATCTACACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GGCGCCACTGACACACCTCGGAAGCAGAAGGCATGGTaGTTTGACAGTGGGTCAGGGAGGCCGGTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: GATDTPRKQKAW*FDSGSGRPVWL
Trigger: CAACCAAACCGGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCTGCTTCCGAGGTGTGTCAGTGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp TGGCAAGCGGGGCTGACCAGGGACTTCAGCTGCACCTaGAGAGATGGTCACTCGCACTACCAGGTCCTCACT +
Preference number: 6 (lower is better)
Translates to: WQAGLTRDFSCT*RDGHSHYQVLT
Trigger: AGTGAGGACCTGGTAGTGCGAGTGACCATCTCTCCAGGTGCAGCTGAAGTCCCTGGTCAGCCCCGCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CAA 90 bp GAGAGGGCGCCACTGACACACCTCGGAAGCAGAAGGCATGGTGCTTaGACAGTGGGTCAGGGAGGCCGGTTTGGTTGGGGTAGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: ERAPLTHLGSRRHGA*TVGQGGRFGWGRGR
Trigger: TCTACCTCTACCCCAACCAAACCGGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCTGCTTCCGAGGTGTGTCAGTGGCGCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp CCAAGGGGACAGCATCCACACCAGGCCCCACCTGAGTaGCGATCCAGTCCTCTATGTCAGAGGGTGATGTGG +
Preference number: 6 (lower is better)
Translates to: PRGQHPHQAPPE*RSSPLCQRVMW
Trigger: CCACATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTGGGGCCTGGTGTGGATGCTGTCCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp GGCTCCAAGGGGACAGCATCCACACCAGGCCCCACCTaGGTGACGATCCAGTCCTCTATGTCAGAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: GSKGTASTPGPT*VTIQSSMSEGD
Trigger: ATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTGGGGCCTGGTGTGGATGCTGTCCCCTTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GGAGAGGCAATGACGGCCCCGGTGTGCATGCAGGCCTaGTGTGCCTCCTCAAATGTCAGAGAGTATCTGGTG +
Preference number: 6 (lower is better)
Translates to: GEAMTAPVCMQA*CASSNVREYLV
Trigger: CACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCCTGCATGCACACCGGGGCCGTCATTGCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp CCTGAGGGAAGGCCACTTTCAATGCCCCCTGAAGGCTaGCCACTGGAGTCAAGGCGTCCTGAAGCATCTCCA +
Preference number: 6 (lower is better)
Translates to: PEGRPLSMPPEG*PLESRRPEASP
Trigger: TGGAGATGCTTCAGGACGCCTTGACTCCAGTGGGCAGCCTTCAGGGGGCATTGAAAGTGGCCTTCCCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp CTCCACTCACTTCCGGAGCGGCCGATCCCTCCCTGGTaGCTTCCTGAAAGGTCCATGGGTTGCTGTTTACCT +
Preference number: 6 (lower is better)
Translates to: LHSLPERPIPPW*LPERSMGCCLP
Trigger: AGGTAAACAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCGCTCCGGAAGTGAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp TCCTCAGGAGTGACAATGCTGCTCAGATGTGACTGCTaGTCCCGACACCGTCTCTCCGCATCCACCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SSGVTMLLRCDC*SRHRLSASTQV
Trigger: GACCTGGGTGGATGCGGAGAGACGGTGTCGGGAGCAGCAGTCACATCTGAGCAGCATTGTCACTCCTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 72 bp CCACTGACACACCTCGGAAGCAGAAGGCATGGTGCTTaGACAGTGGGTCAGGGAGGCCGGTTTGGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: PLTHLGSRRHGA*TVGQGGRFGWG
Trigger: ACCCCAACCAAACCGGCCTCCCTGACCCACTGTCAAAGCACCATGCCTTCTGCTTCCGAGGTGTGTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp GCAGCTCCAGGTCTGGCCAGGTCACCGTCTGGATGGTaGTGTCGTCTTCACCACCCACCCCGAAGAAGTTTT +
Preference number: 6 (lower is better)
Translates to: AAPGLARSPSGW*CRLHHPPRRSF
Trigger: AAAACTTCTTCGGGGTGGGTGGTGAAGACGACATCACCATCCAGACGGTGACCTGGCCAGACCTGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp ACTTCCGGAGCGGCCGATCCCTCCCTGGTGCCTTCCTaGAAGGTCCATGGGTTGCTGTTTACCTCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: TSGAADPSLVPS*KVHGLLFTSVL
Trigger: AAGCACAGAGGTAAACAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCGCTCCGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp CAAAGCCCTCAGTGCACTGGTACCGCACCAGGGAGCTaGTCTCGTAGCGATCTTTCTTCTGCCCGAGGGTTC +
Preference number: 6 (lower is better)
Translates to: QSPQCTGTAPGS*SRSDLSSARGF
Trigger: GAACCCTCGGGCAGAAGAAAGATCGCTACGAGATCAGCTCCCTGGTGCGGTACCAGTGCACTGAGGGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp TGTTCCTCAGGAGTGACAATGCTGCTCAGATGTGACTaGTGCTCCCGACACCGTCTCTCCGCATCCACCCAG +
Preference number: 6 (lower is better)
Translates to: CSSGVTMLLRCD*CSRHRLSASTQ
Trigger: CTGGGTGGATGCGGAGAGACGGTGTCGGGAGCAGCAGTCACATCTGAGCAGCATTGTCACTCCTGAGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp TGGGCTGCTGTCTTTGTCACCCACACATGGGGTTCGTaGGCTCACAATGGGGTATCTGACGGTCTGGTCCTG +
Preference number: 6 (lower is better)
Translates to: WAAVFVTHTWGS*AHNGVSDGLVL
Trigger: CAGGACCAGACCGTCAGATACCCCATTGTGAGCCCACGAACCCCATGTGTGGGTGACAAAGACAGCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp CCTGACTCCTGGGCTGCTGTCTTTGTCACCCACACATaGGGTTCGTGGGCTCACAATGGGGTATCTGACGGT +
Preference number: 6 (lower is better)
Translates to: PDSWAAVFVTHT*GSWAHNGVSDG
Trigger: ACCGTCAGATACCCCATTGTGAGCCCACGAACCCCATGTGTGGGTGACAAAGACAGCAGCCCAGGAGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp TCACCTCCAGAGGGCAACCTGCCAACTGTGGGAGTATaGGACCAGGGGACTTCTCCATCTCCTGAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: SPPEGNLPTVGV*DQGTSPSPEAE
Trigger: TTCTGCCTCAGGAGATGGAGAAGTCCCCTGGTCCCATACTCCCACAGTTGGCAGGTTGCCCTCTGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CAA 72 bp CTGGGACTGAAGCTTCTATCCCAGACCCTGGGAAGTTaGTTACAGCGCCACCAAGGTCCCCGGATGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LGLKLLSQTLGS*LQRHQGPRMLR
Trigger: CCTCAGCATCCGGGGACCTTGGTGGCGCTGTAACAAACTTCCCAGGGTCTGGGATAGAAGCTTCAGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 90 bp AGCATCGCTGGGGATGGCTGGATAGTTGGGGAGCGACACCTTGTCTaGGTAGATGCTGTTGACTCGAACCTGTCCTTCAGTGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: SIAGDGWIVGERHLV*VDAVDSNLSFSGHQ
Trigger: CTGGTGGCCACTGAAGGACAGGTTCGAGTCAACAGCATCTACCAAGACAAGGTGTCGCTCCCCAACTATCCAGCCATCCCCAGCGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CAA 90 bp CATTCAGACAAGGGCTTGAGAGGCACTCGTCAATGTCTGCAACGGTaGACTCCGTCTCCCCTGACCCTTCTGAAGAAGAGAGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: HSDKGLRGTRQCLQR*TPSPLTLLKKRGWG
Trigger: CCCCCACCCTCTCTTCTTCAGAAGGGTCAGGGGAGACGGAGTCAACCGTTGCAGACATTGACGAGTGCCTCTCAAGCCCTTGTCTGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS CCA 72 bp GGTGCTTTGACAGTGGGTCAGGGAGGCCGGTTTGGTTaGGGTAGAGGTAGACAGTTCTCACGCCAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: GALTVGQGGRFG*GRGRQFSRQVC
Trigger: ACAAACCTGGCGTGAGAACTGTCTACCTCTACCCCAACCAAACCGGCCTCCCTGACCCACTGTCAAAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GGCCGATCCCTCCCTGGTGCCTTCCTGAAAGGTCCATaGGTTGCTGTTTACCTCTGTGCTTGGGGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: GRSLPGAFLKGP*VAVYLCAWGCH
Trigger: ATGACAACCCCAAGCACAGAGGTAAACAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp ATTCTCCACTCACTTCCGGAGCGGCCGATCCCTCCCTaGTGCCTTCCTGAAAGGTCCATGGGTTGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: ILHSLPERPIPP*CLPERSMGCCL
Trigger: TAAACAGCAACCCATGGACCTTTCAGGAAGGCACCAGGGAGGGATCGGCCGCTCCGGAAGTGAGTGGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp ACTCCGTCTCCCCTGACCCTTCTGAAGAAGAGAGGGTaGGGGCATCTGTCAGGGACATGGTTGTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: TPSPLTLLKKRG*GHLSGTWLFLL
Trigger: CAGCAGAAACAACCATGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAGAAGGGTCAGGGGAGACGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp CCTGCTGTGCCTCCTCAAATGTCAGAGAGTATCTGGTaGAGCCTGGGCGATAGTGGAATACAACTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: PAVPPQMSESIW*SLGDSGIQLPL
Trigger: CAGGGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp AGGCCTGCTGTGCCTCCTCAAATGTCAGAGAGTATCTaGTGGAGCCTGGGCGATAGTGGAATACAACTCCCC +
Preference number: 6 (lower is better)
Translates to: RPAVPPQMSESI*WSLGDSGIQLP
Trigger: GGGGAGTTGTATTCCACTATCGCCCAGGCTCCACCAGATACTCTCTGACATTTGAGGAGGCACAGCAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GACCTCAGCTACTCCACTTGGGAGGCCACTGAACTCTaGAGTGGGGGATGTGAGTCCACTGGAATCAATTGC +
Preference number: 6 (lower is better)
Translates to: DLSYSTWEATEL*SGGCESTGINC
Trigger: GCAATTGATTCCAGTGGACTCACATCCCCCACTCCAGAGTTCAGTGGCCTCCCAAGTGGAGTAGCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp CTTCCGGAAGCCCAGAGCTTTCCCCACTGCCAGTTGTaGCAGCTATGGATTCTCCACTTACATCAGTGGTGC +
Preference number: 6 (lower is better)
Translates to: LPEAQSFPHCQL*QLWILHLHQWC
Trigger: GCACCACTGATGTAAGTGGAGAATCCATAGCTGCCACAACTGGCAGTGGGGAAAGCTCTGGGCTTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp CTGAAGAAGAGAGGGTGGGGGCATCTGTCAGGGACATaGTTGTTTCTGCTGTCTGGGTCTCCTCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LKKRGWGHLSGT*LFLLSGSPLLS
Trigger: ACTCAGGAGAGGAGACCCAGACAGCAGAAACAACCATGTCCCTGACAGATGCCCCCACCCTCTCTTCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 72 bp CCTTCAGTGGCCACCAGCAGTACCACCTCCTTTTCCTaGGAAACACGGCTCCACTTGATTCTTGGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: PSVATSSTTSFS*ETRLHLILGVR
Trigger: CCTCACCCCAAGAATCAAGTGGAGCCGTGTTTCCAAGGAAAAGGAGGTGGTACTGCTGGTGGCCACTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp AGGGAAGACCCTAGGAGGACCTTCAATGGGGATGGTTaGGGGATGCTCACGCTCAGTGAGTTGTCATGGTCT +
Preference number: 6 (lower is better)
Translates to: REDPRRTFNGDG*GMLTLSELSWS
Trigger: AGACCATGACAACTCACTGAGCGTGAGCATCCCTCAACCATCCCCATTGAAGGTCCTCCTAGGGTCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp AGTTGGGGAGCGACACCTTGTCTTGGTAGATGCTGTTaGCTCGAACCTGTCCTTCAGTGGCCACCAGCAGTA +
Preference number: 6 (lower is better)
Translates to: SWGATPCLGRCC*LEPVLQWPPAV
Trigger: TACTGCTGGTGGCCACTGAAGGACAGGTTCGAGTCAACAGCATCTACCAAGACAAGGTGTCGCTCCCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp CACCTGAGTGACGATCCAGTCCTCTATGTCAGAGGGTaGTGTGGGTGTACTACCCCCTTCTTCTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: HLSDDPVLYVRG*CGCTTPFFSWR
Trigger: TCTCCAGGAGAAGAAGGGGGTAGTACACCCACATCACCCTCTGACATAGAGGACTGGATCGTCACTCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp ACAGGTTCCCTCTGTAGCTCGGAAGGCATAAGCATGTaGAAGTGTCCAAGGCATCCACGCAGGTGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: TGSLCSSEGISM*KCPRHPRRWLH
Trigger: ATGGAGCCACCTGCGTGGATGCCTTGGACACTTTCACATGCTTATGCCTTCCGAGCTACAGAGGGAACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS GCA 72 bp TATGGAGAGCTTGGTGTCTCCGTGCTGGTTTCCATCTaGCCAGACTGCAATGTGCTTAGGTCCAGAGACCCA +
Preference number: 6 (lower is better)
Translates to: YGELGVSVLVSI*PDCNVLRSRDP
Trigger: TGGGTCTCTGGACCTAAGCACATTGCAGTCTGGGCAGATGGAAACCAGCACGGAGACACCAAGCTCTCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp GTTCTGGATCTCCAAGGTAGCATCGCTGGGGATGGCTaGATAGTTGGGGAGCGACACCTTGTCTTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: VLDLQGSIAGDG*IVGERHLVLVD
Trigger: ATCTACCAAGACAAGGTGTCGCTCCCCAACTATCCAGCCATCCCCAGCGATGCTACCTTGGAGATCCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GGTACTGTCCACAAGGGAGACAGTTGGAAAGCCAGATaGAAGTCCACTAAAGTCAGGCAGGCCAGAGGATGG +
Preference number: 6 (lower is better)
Translates to: GTVHKGDSWKAR*KSTKVRQARGW
Trigger: CCATCCTCTGGCCTGCCTGACTTTAGTGGACTTCCATCTGGCTTTCCAACTGTCTCCCTTGTGGACAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CAA 72 bp AAGGGCTTGAGAGGCACTCGTCAATGTCTGCAACGGTaGACTCCGTCTCCCCTGACCCTTCTGAAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: KGLRGTRQCLQR*TPSPLTLLKKR
Trigger: TCTCTTCTTCAGAAGGGTCAGGGGAGACGGAGTCAACCGTTGCAGACATTGACGAGTGCCTCTCAAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206779.2
CDS CAA 90 bp TGGAGTGGGGGATGTGAGTCCACTGGAATCAATTGCTCCAGAAGATaGTTCACTGACGTCCACCGTCCCAGATGTGCCAGACAGTTCCGT +
Preference number: 6 (lower is better)
Translates to: WSGGCESTGINCSRR*FTDVHRPRCARQFR
Trigger: ACGGAACTGTCTGGCACATCTGGGACGGTGGACGTCAGTGAACAATCTTCTGGAGCAATTGATTCCAGTGGACTCACATCCCCCACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp GTCCACTGGAATCAATTGCTCCAGAAGATTGTTCACTaGCGTCCACCGTCCCAGATGTGCCAGACAGTTCCG +
Preference number: 6 (lower is better)
Translates to: VHWNQLLQKIVH*RPPSQMCQTVP
Trigger: CGGAACTGTCTGGCACATCTGGGACGGTGGACGTCAGTGAACAATCTTCTGGAGCAATTGATTCCAGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp CCCCAGATATGTCTGGTGTCCCAGAATGGGCACCACTaGATTCCAAAATGCCCGAAGGTCCTTCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: PQICLVSQNGHH*IPKCPKVLLQL
Trigger: AAGCTGGAGAAGGACCTTCGGGCATTTTGGAATTCAGTGGTGCCCATTCTGGGACACCAGACATATCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp AGGGTAAGCAGACAGGTCACTGCTGGCTTCTGGGACTaGAGCTTCTATCCCAGACCCTGGGAAGTTTGTTAC +
Preference number: 6 (lower is better)
Translates to: RVSRQVTAGFWD*SFYPRPWEVCY
Trigger: GTAACAAACTTCCCAGGGTCTGGGATAGAAGCTTCAGTCCCAGAAGCCAGCAGTGACCTGTCTGCTTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp CATTCACCTCTGAGGTGTGATCAGACCATTCTCCGCTaGTTTCAGTCCTGTCTCCAGAAGCCATGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: HSPLRCDQTILR*FQSCLQKPWVW
Trigger: CCACACCCATGGCTTCTGGAGACAGGACTGAAATCAGCGGAGAATGGTCTGATCACACCTCAGAGGTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp TCTCCTGAGTATGAGGGATTTGGGGATTCGATTTCTTaGAGTGTCTCTGTAGGGTACCGGGTAGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SPEYEGFGDSIS*SVSVGYRVGWA
Trigger: GGCCCAGCCTACCCGGTACCCTACAGAGACACTTCAAGAAATCGAATCCCCAAATCCCTCATACTCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp ACCCTAGGAGGACCTTCAATGGGGATGGTTGAGGGATaGTCACGCTCAGTGAGTTGTCATGGTCTGGAACTT +
Preference number: 6 (lower is better)
Translates to: TLGGPSMGMVEG*SRSVSCHGLEL
Trigger: AAGTTCCAGACCATGACAACTCACTGAGCGTGAGCATCCCTCAACCATCCCCATTGAAGGTCCTCCTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GAGTTTGACCACTTCCTAGAGTTCCAGGAGGTAGTTTaGCAAAGTCCAAGGCCCCAGAAGCAGACCCTACCA +
Preference number: 6 (lower is better)
Translates to: EFDHFLEFQEVV*QSPRPQKQTLP
Trigger: TGGTAGGGTCTGCTTCTGGGGCCTTGGACTTTGGCAAACTACCTCCTGGAACTCTAGGAAGTGGTCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp GTCAGGCAGGCCAGAGGATGGGCCACTTCCAATGTCTaGTCCAGAATACTCACCACTAAATCCAGAGGGAAA +
Preference number: 6 (lower is better)
Translates to: VRQARGWATSNV*SRILTTKSRGK
Trigger: TTTCCCTCTGGATTTAGTGGTGAGTATTCTGGAGCAGACATTGGAAGTGGCCCATCCTCTGGCCTGCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp TCTCCTCAGCGAAGCAGTACACATCATAGGTCTCATTaGTGTCCCGGATTCCGTAGGTTCTCACTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: SPQRSSTHHRSH*CPGFRRFSLQG
Trigger: TCCCTGGAGTGAGAACCTACGGAATCCGGGACACCAATGAGACCTATGATGTGTACTGCTTCGCTGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp CATATCGGGATGAGGGATCAGGATAGCCTGTCTGGTTaGCGTGTAGATAGACAGTCCTTACACCCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: HIGMRDQDSLSG*RVDRQSLHPGG
Trigger: ACCTCCTGGGTGTAAGGACTGTCTATCTACACGCCAACCAGACAGGCTATCCTGATCCCTCATCCCGATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp CCAGAAAGCTCCCCAGATATGTCTGGTGTCCCAGAATaGGCACCACTGAATTCCAAAATGCCCGAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: PESSPDMSGVPE*APLNSKMPEGP
Trigger: AGGACCTTCGGGCATTTTGGAATTCAGTGGTGCCCATTCTGGGACACCAGACATATCTGGGGAGCTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp AGGAGATCCAGATGCTTGGCCACTGAGTTCAGTTCCTaGAGGGAGACCACTAATGTCCGCACTACTGTCCAA +
Preference number: 6 (lower is better)
Translates to: RRSRCLATEFSS*RETTNVRTTVQ
Trigger: TTGGACAGTAGTGCGGACATTAGTGGTCTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GGTGCTGGAAAAGTCTCCACTAAAATATGGAGAGCTTaGTGTCTCCGTGCTGGTTTCCATCTGCCCAGACTG +
Preference number: 6 (lower is better)
Translates to: GAGKVSTKIWRA*CLRAGFHLPRL
Trigger: CAGTCTGGGCAGATGGAAACCAGCACGGAGACACCAAGCTCTCCATATTTTAGTGGAGACTTTTCCAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp GGAGTGTATGTCATAGAAGGACCATGGCCAAGTTCCTaGGAAACAGTGGGTTCAGTCACACCCTCCACTAAC +
Preference number: 6 (lower is better)
Translates to: GVYVIEGPWPSS*ETVGSVTPSTN
Trigger: GTTAGTGGAGGGTGTGACTGAACCCACTGTTTCCCAGGAACTTGGCCATGGTCCTTCTATGACATACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 72 bp GGATGTGAGTCCACTGGAATCAATTGCTCCAGAAGATaGTTCACTGACGTCCACCGTCCCAGATGTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GCESTGINCSRR*FTDVHRPRCAR
Trigger: TCTGGCACATCTGGGACGGTGGACGTCAGTGAACAATCTTCTGGAGCAATTGATTCCAGTGGACTCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 90 bp TCCACTGCCAAAGAGAATTCCAGACCCATCTCCACTGACATCTGGTaGTCCAGAGGACAGTTCATTAAGCTCAGTCACTCCAGATGTCGC +
Preference number: 6 (lower is better)
Translates to: STAKENSRPISTDIW*SRGQFIKLSHSRCR
Trigger: GCGACATCTGGAGTGACTGAGCTTAATGAACTGTCCTCTGGACAACCAGATGTCAGTGGAGATGGGTCTGGAATTCTCTTTGGCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp CTCTGTGATGGTGCTGCTGATGGCAACATTCACCTCTaGGGTGTGATCAGACCATTCTCCGCTGATTTCAGT +
Preference number: 6 (lower is better)
Translates to: LCDGAADGNIHL*GVIRPFSADFS
Trigger: ACTGAAATCAGCGGAGAATGGTCTGATCACACCTCAGAGGTGAATGTTGCCATCAGCAGCACCATCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS TCA 72 bp CATGGTCTGGAACTTCTTCTGAGATCACTGCAGCGATaGCCCTCAGAGTCACAAAGACCAAGAGTAAAGTGG +
Preference number: 6 (lower is better)
Translates to: HGLELLLRSLQR*PSESQRPRVKW
Trigger: CCACTTTACTCTTGGTCTTTGTGACTCTGAGGGTCATCGCTGCAGTGATCTCAGAAGAAGTTCCAGACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS GCA 72 bp TCCAGATCTGTTTCATGGAAGGCAGAAGTGATTCCATaGAGATCTGGGAACTCAGACAGTTTACTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SRSVSWKAEVIP*RSGNSDSLLLA
Trigger: GGCCAGCAGTAAACTGTCTGAGTTCCCAGATCTGCATGGAATCACTTCTGCCTTCCATGAAACAGATCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp CTGGGATGTCTACAAAATCTTCACCTGTGTAACAGATaGCGTCATATCGGGATGAGGGATCAGGATAGCCTG +
Preference number: 6 (lower is better)
Translates to: LGCLQNLHLCNR*RHIGMRDQDSL
Trigger: CAGGCTATCCTGATCCCTCATCCCGATATGACGCCATCTGTTACACAGGTGAAGATTTTGTAGACATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp CCATTCAGTCTGTTTTCTTGGCTCAGTGGTGAAATATaGCACTTCTGTTGTCTTTGGCTCCAAGGGGACAGC +
Preference number: 6 (lower is better)
Translates to: PFSLFSWLSGEI*HFCCLWLQGDS
Trigger: GCTGTCCCCTTGGAGCCAAAGACAACAGAAGTGCCATATTTCACCACTGAGCCAAGAAAACAGACTGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CCA 72 bp GCCAAAGAGAATTCCAGACCCATCTCCACTGACATCTaGTTGTCCAGAGGACAGTTCATTAAGCTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: AKENSRPISTDI*LSRGQFIKLSH
Trigger: GTGACTGAGCTTAATGAACTGTCCTCTGGACAACCAGATGTCAGTGGAGATGGGTCTGGAATTCTCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS CAA 72 bp CCTGAAAGGTCCATGGGTTGCTGTTTACCTCTGTGCTaGGGGTTGTCATTTCCAGATCTGTTTCATGGAAGG +
Preference number: 6 (lower is better)
Translates to: PERSMGCCLPLC*GLSFPDLFHGR
Trigger: CCTTCCATGAAACAGATCTGGAAATGACAACCCCAAGCACAGAGGTAAACAGCAACCCATGGACCTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS GCA 72 bp CTTCCTGAAAGGTCCATGGGTTGCTGTTTACCTCTGTaGTTGGGGTTGTCATTTCCAGATCTGTTTCATGGA +
Preference number: 6 (lower is better)
Translates to: LPERSMGCCLPL*LGLSFPDLFHG
Trigger: TCCATGAAACAGATCTGGAAATGACAACCCCAAGCACAGAGGTAAACAGCAACCCATGGACCTTTCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp TACATCAGTGGTGCTGGAAAAGTCTCCACTAAAATATaGAGAGCTTGGTGTCTCCGTGCTGGTTTCCATCTG +
Preference number: 6 (lower is better)
Translates to: YISGAGKVSTKI*RAWCLRAGFHL
Trigger: CAGATGGAAACCAGCACGGAGACACCAAGCTCTCCATATTTTAGTGGAGACTTTTCCAGCACCACTGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CCA 72 bp TCTGTGCTTGGGGTTGTCATTTCCAGATCTGTTTCATaGAAGGCAGAAGTGATTCCATGCAGATCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: SVLGVVISRSVS*KAEVIPCRSGN
Trigger: GTTCCCAGATCTGCATGGAATCACTTCTGCCTTCCATGAAACAGATCTGGAAATGACAACCCCAAGCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2
CDS CAA 72 bp AAAGAGAATTCCAGACCCATCTCCACTGACATCTGGTaGTCCAGAGGACAGTTCATTAAGCTCAGTCACTCC +
Preference number: 6 (lower is better)
Translates to: KENSRPISTDIW*SRGQFIKLSHS
Trigger: GGAGTGACTGAGCTTAATGAACTGTCCTCTGGACAACCAGATGTCAGTGGAGATGGGTCTGGAATTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032835.7
CDS TCA 72 bp TTGTCATTTCCAGATCTGTTTCATGGAAGGCAGAAGTaGTTCCATGCAGATCTGGGAACTCAGACAGTTTAC +
Preference number: 6 (lower is better)
Translates to: LSFPDLFHGRQK*FHADLGTQTVY
Trigger: GTAAACTGTCTGAGTTCCCAGATCTGCATGGAATCACTTCTGCCTTCCATGAAACAGATCTGGAAATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032835.7
ENSMUST00000206779.2