Pregenerated sensors for ACADVL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018574Ensembl transcript IDs: ENSMUST00000018718.8, ENSMUST00000102574.10
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCATGGCTTGTCCAGAACTaGCTGAGTGGCCTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPWLVQN*LSGLPG Trigger: GCCAGGGAGGCCACTCAGGCAGTTCTGGACAAGCCA...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGCACAGGGGCTGGGTATaGCTGAGCTTCGGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWHRGWV*LSFGWR Trigger: CCTCCATCCGAAGCTCAGCCATACCCAGCCCCTGTG...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGATGCCCCCAGTTCCTTaGGTCCCTGCAAAGTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGMPPVP*VPAKCR Trigger: ACGACACTTTGCAGGGACTCAAGGAACTGGGGGCAT...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGGGATTTCATGGTGCCTaGGAGGGTTGCAGCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWGFHGA*EGCSHP Trigger: GGGATGGCTGCAACCCTCGCAGGCACCATGAAATCC...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTTGGATGCACTCATCTaGCACTTTCCAGGCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDLDALI*HFPGRL Trigger: GAGGCGGCCTGGAAAGTGGCAGATGAGTGCATCCAA...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCACACGCTCCACCCCTaGTTCCTTCATGAAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGHTLHP*FLHEAH Trigger: ATGGGCTTCATGAAGGAACCAGGGGTGGAGCGTGTG...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGTGTGTTTCACCAGCTTaGCCTCCACCACGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGCVSPA*PPPRWQ Trigger: TTGCCACCGTGGTGGAGGCCAAGCTGGTGAAACACA...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGTGGCATAGAGGTCAATaGCGCCGTCCGCCAGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLWHRGQ*RRPPVA Trigger: AGCGACTGGCGGACGGCGCCATTGACCTCTATGCCA...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATAGTTCCTTGAGTCCCTaGAAAGTGTCGTCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDSSLSP*KVSSST Trigger: GGTGGAGGACGACACTTTGCAGGGACTCAAGGAACT...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGTCTCAGCTGTTTGCCTaGTTCTCCCATCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWSQLFA*FSHQEA Trigger: GGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGA...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTCCGTCTCAGCTGTTTaGCTGCTTCTCCCATCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDSVSAV*LLLPSG Trigger: TCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGA...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCAAGGCGTCGTTCTTaGCAGGGTCATTCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGPRRRS*QGHSLP Trigger: AGGAAGTGAATGACCCTGCCAAGAACGACGCCTTGG...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGAACCACCCAGCTCGCTaGGTACTTGCAGGCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWNHPAR*VLAGQM Trigger: CATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTT...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCATGGCCTCCACCACGGTaGCAAATTGATCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPWPPPR*QIDPEP Trigger: AGGCTCTGGATCAATTTGCCACCGTGGTGGAGGCCA...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGGTGCCTGTTCTTCACTaGGCACAGATGGGTATGGGA | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWVPVLH*AQMGMG Trigger: TCCCATACCCATCTGTGCTCAGTGAAGAACAGGCAC...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGCCCCCATTACTaGTCCAGATCTTGCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLPGPHY*SRSCSH Trigger: ATGGGAGCAAGATCTGGATCAGTAATGGGGGCCTGG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCATCTTGGCAAAGACAGTaGAAATGTCAGCCAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPSWQRQ*KCQPGP Trigger: GGGGCCTGGCTGACATTTTCACTGTCTTTGCCAAGA...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCACACCAAGGTCATGCATaGCCACAATCTCTGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPHQGHA*PQSLPS Trigger: GCTTGGCAGAGATTGTGGGCATGCATGACCTTGGTG...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATCTAACACCAAGGTCATaGATGCCCACAATCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDLTPRS*MPTISA Trigger: GGCAGAGATTGTGGGCATGCATGACCTTGGTGTTAG...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCACATTTTCTCATGCTGTaGCGTCGGGTAGCCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPHFLML*RRVALT Trigger: AGTGAGGGCTACCCGACGGCACAGCATGAGAAAATG...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGATTTTCCACAGGGGCTaGGTATGGCTGAGCTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWIFHRG*VWLSFG Trigger: TCCGAAGCTCAGCCATACCCAGCCCCTGTGGAAAAT...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGATCCCTGGTCCATGTTaGCACTCAGCATGTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGIPGPC*HSACKP Trigger: TGGCTTACATGCTGAGTGCCAACATGGACCAGGGAT...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATGTCCCACCAGCTCTTTaGGAAATTGTGCCTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDVPPAL*EIVPVL Trigger: AAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGAC...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGAGAGCAAGATGCCTTTaGAACCGATGCTCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGRARCL*NRCSDE Trigger: CTCATCAGAGCATCGGTTTCAAAGGCATCTTGCTCT...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCTATCTGGAAGTCTTTaGATCCCTGGTCCATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGLSGSL*IPGPCW Trigger: CCAACATGGACCAGGGATTCAAAGACTTCCAGATAG...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCTTGGAGATGCTTCTaGAGTTCCGGAAGAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLPWRCF*SSGRAP Trigger: AGGAGCTCTTCCGGAACTTCAGAAGCATCTCCAAGG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCACTCTCTGGGCCTTTGTaGCATAGAGCAAGATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPLSGPL*HRARCL Trigger: AAGGCATCTTGCTCTATGGCACAAAGGCCCAGAGAG...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATAAGTCTTTGAATCCCTaGTCCATGTTGGCACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDKSLNP*SMLALS Trigger: GCTGAGTGCCAACATGGACCAGGGATTCAAAGACTT...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATATGGCGGCTTCTATCTaGAAGTCTTTGAATCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDMAASI*KSLNPW Trigger: CCAGGGATTCAAAGACTTCCAGATAGAAGCCGCCAT...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCGATTCTGCCCTGGCTaGTTTTTCTCTGGTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLRFCPG*FFSGGS Trigger: GCTTCCACCAGAGAAAAACCAGCCAGGGCAGAATCG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGACTTCGATTCTGCCCTaGCTGGTTTTTCTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWTSILP*LVFLWW Trigger: CCACCAGAGAAAAACCAGCCAGGGCAGAATCGAAGT...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCACTACAAAAGCTGTaGTCTTCTCTTTCACGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLPLQKL*SSLSRP Trigger: GGGCCGTGAAAGAGAAGATCACAGCTTTTGTAGTGG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCAAAGCCTGCCCAGATaGCACTCTGGGAAGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLQSLPR*HSGKVF Trigger: AAATACCTTCCCAGAGTGGCATCTGGGCAGGCTTTG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGCCCAGATGCCACTCTaGGAAGGTATTTTTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPAQMPL*EGIFLS Trigger: AGAGAGAAAAATACCTTCCCAGAGTGGCATCTGGGC...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGGGCTGCATCTTTAATTaGCGTCTTGGCAAAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGGCIFN*RLGKDS Trigger: ACTGTCTTTGCCAAGACGCCAATTAAAGATGCAGCC...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGTGGCTGGTTTTTCTCTaGTGGAAGCATCAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWWLVFL*WKHQRR Trigger: TCTCCTCTGATGCTTCCACCAGAGAAAAACCAGCCA...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAAGCAAAAGATTTTGCTaGTGGCGGCTTCTATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPSKRFC*WRLLSG Trigger: TCCAGATAGAAGCCGCCATCAGCAAAATCTTTTGCT...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGGCAGGAACTGCTCGTTaGCAATCCCTTTCTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLAGTAR*QSLSCV Trigger: AACACAAGAAAGGGATTGTCAACGAGCAGTTCCTGC...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGTTCACTGAGCACAGATaGGTATGGGAACACCTGATC | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLFTEHR*VWEHLI Trigger: GATCAGGTGTTCCCATACCCATCTGTGCTCAGTGAA...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCATCAGCATGTAAGCCATaGACTCAGTCACATACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPSACKP*TQSHTA Trigger: TGCAGTATGTGACTGAGTCCATGGCTTACATGCTGA...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGCTCTTTGAGAAATTGTaGCTGTTCTTCACTGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWLFEKL*LFFTEH Trigger: GTGCTCAGTGAAGAACAGGCACAATTTCTCAAAGAG...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCATCGAAGAATGTCATTTaGCCCTTCAAAGATCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPSKNVI*PFKDPE Trigger: TTCCGGATCTTTGAAGGGGCAAATGACATTCTTCGA...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR GCA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGAAAGGACTTCGATTCTaGCCTGGCTGGTTTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLKGLRF*PGWFFS Trigger: AGAGAAAAACCAGCCAGGGCAGAATCGAAGTCCTTT...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR TCA 90 bp | CTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAAGATCTTGCTCCCATTaGGAGTGTAATATTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHHPHKGFWHQRRHMTLPRSCSH*ECNIFH Trigger: GTGGAAAATATTACACTCTCAATGGGAGCAAGATCT...TGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS GCA 90 bp | AGAGAGGCCCAAACCACCCAGCTCGCTGGGTACTTGCAGGCCAAATaGCCCCAGTTCCTTGAGTCCCTGCAAAGTGTCGTCCTCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: REAQTTQLAGYLQAK*PQFLESLQSVVLHL Trigger: AAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTGGGCCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 90 bp | TCGCTGGGTACTTGCAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTaGAAAGTGTCGTCCTCCACCTTCTCCAAGGCGTCGTTCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGTCRPNAPSSLSP*KVSSSTFSKASFLA Trigger: TGCCAAGAACGACGCCTTGGAGAAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | TACTGGGTATTAGAGAGGCCCAAACCACCCAGCTCGCTGGGTACTTaGAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTGCAAAGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YWVLERPKPPSSLGT*RPNAPSSLSPCKVS Trigger: CGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTGGGCCTCTCTAATACCCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 90 bp | TCTGGTGGAAGCATCAGAGGAGAGGGTTTCTGGCTTGTCCAGAACTaGCTGAGTGGCCTCCCTGGCATAAAGTCGCTGGGCAGAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGSIRGEGFWLVQN*LSGLPGIKSLGRDR Trigger: CCTATCTCTGCCCAGCGACTTTATGCCAGGGAGGCCACTCAGGCAGTTCTGGACAAGCCAGAAACCCTCTCCTCTGATGCTTCCACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCTCCGTCTCAGCTGTTaGCCTGCTTCTCCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGLRLSC*PASPIR Trigger: CCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAG...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS TCA 90 bp | GCTCCCATTGAGAGTGTAATATTTTCCACAGGGGCTGGGTATGGCTaGGCTTCGGATGGAGGCTACATCGGATCCACTCGAGGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: APIESVIFSTGAGYG*ASDGGYIGSTRGLC Trigger: ACAGAGCCCTCGAGTGGATCCGATGTAGCCTCCATCCGAAGCTCAGCCATACCCAGCCCCTGTGGAAAATATTACACTCTCAATGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 90 bp | TCCCAGGGTAACGCTAACACCAAGGTCATGCATGCCCACAATCTCTaGCAAGCGAGCATACTGGGTATTAGAGAGGCCCAAACCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQGNANTKVMHAHNL*QASILGIREAQTTQ Trigger: CTGGGTGGTTTGGGCCTCTCTAATACCCAGTATGCTCGCTTGGCAGAGATTGTGGGCATGCATGACCTTGGTGTTAGCGTTACCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | TGCGACTTAACTCTGGGTGGACAATCCCTGACAGACTCAAACCACTaGCGATTCCTGTCCTCCGTCTCAGCTGTTTGCCTGCTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CDLTLGGQSLTDSNH*RFLSSVSAVCLLLP Trigger: TGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGTGGTTTGAGTCTGTCAGGGATTGTCCACCCAGAGTTAAGTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGAATGCCCCCAGTTCCTaGAGTCCCTGCAAAGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGNAPSS*SPCKVS Trigger: CGACACTTTGCAGGGACTCAAGGAACTGGGGGCATT...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGGGATTCTTCAGGGCATaGCCCAGCCCAGTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWGFFRA*PSPVSS Trigger: GGAACTCACTGGGCTGGGCAATGCCCTGAAGAATCC...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTTTCTCGGATCCGAGTaGCAGCCTCAATGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDFLGSE*QPQCTS Trigger: GCTGGTGCATTGAGGCTGCAACTCGGATCCGAGAAA...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS TCA 90 bp | CCTTTCTTGTGTTTCACCAGCTTGGCCTCCACCACGGTGGCAAATTaGTCCAGAGCCTGCACTGCCAGTTCACCACTGCGACTTAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFLCFTSLASTTVAN*SRACTASSPLRLNS Trigger: AGAGTTAAGTCGCAGTGGTGAACTGGCAGTGCAGGCTCTGGATCAATTTGCCACCGTGGTGGAGGCCAAGCTGGTGAAACACAAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | ATCAACCGCCTTGGCAATGAGGGATTTCATGGTGCCTGCGAGGGTTaGAGCCATCCCGAATCTTCCGTTGTTGAGGATGTTGACAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: INRLGNEGFHGACEG*SHPESSVVEDVDSN Trigger: GTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCACCATGAAATCCCTCATTGCCAAGGCGGTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | CTGAGGGCTGGACTGCAGACTGGCCATGTTTTCTCGGATCCGAGTTaGAGCCTCAATGCACCAGCTATCACAGAGCATTTTCTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRAGLQTGHVFSDPS*SLNAPAITEHFLML Trigger: CAGCATGAGAAAATGCTCTGTGATAGCTGGTGCATTGAGGCTGCAACTCGGATCCGAGAAAACATGGCCAGTCTGCAGTCCAGCCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 90 bp | GAGTGTAATATTTTCCACAGGGGCTGGGTATGGCTGAGCTTCGGATaGAGGCTACATCGGATCCACTCGAGGGCTCTGTTAGGCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ECNIFHRGWVWLSFG*RLHRIHSRALLGRK Trigger: CTTTCTGCCTAACAGAGCCCTCGAGTGGATCCGATGTAGCCTCCATCCGAAGCTCAGCCATACCCAGCCCCTGTGGAAAATATTACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS CCA 90 bp | TCCCCACAGCAAAGGACTTCGATTCTGCCCTGGCTGGTTTTTCTCTaGTGGAAGCATCAGAGGAGAGGGTTTCTGGCTTGTCCAGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SPQQRTSILPWLVFL*WKHQRRGFLACPEL Trigger: CAGTTCTGGACAAGCCAGAAACCCTCTCCTCTGATGCTTCCACCAGAGAAAAACCAGCCAGGGCAGAATCGAAGTCCTTTGCTGTGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS-3UTR CAA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGTTGTGTTTCACCAGCTaGGCCTCCACCACGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLLCFTS*ASTTVA Trigger: TGCCACCGTGGTGGAGGCCAAGCTGGTGAAACACAA...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS-3UTR CAA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCTCACTCAGGGACCTaGAGGCTCTGGACAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLPHSGT*RLWTEP Trigger: TGGTTCTGTCCAGAGCCTCAAGGTCCCTGAGTGAGG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | CTCAAAGAACCGGGCCACTGGTCCCACCAGCTCTTTGAGAAATTGTaGCTGTTCTTCACTGAGCACAGATGGGTATGGGAACACCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LKEPGHWSHQLFEKL*LFFTEHRWVWEHLI Trigger: GATCAGGTGTTCCCATACCCATCTGTGCTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGGTTCTTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 90 bp | AGTAGCATGATCAACCGCCTTGGCAATGAGGGATTTCATGGTGCCTaGGAGGGTTGCAGCCATCCCGAATCTTCCGTTGTTGAGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSMINRLGNEGFHGA*EGCSHPESSVVEDV Trigger: AACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCACCATGAAATCCCTCATTGCCAAGGCGGTTGATCATGCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 90 bp | ACTCAAACCACTGCCGATTCCTGTCCTCCGTCTCAGCTGTTTGCCTaGTTCTCCCATCAGGAGGCCAACGTTTCCAAAAGGATTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQTTADSCPPSQLFA*FSHQEANVSKRILQ Trigger: CTGAAGAATCCTTTTGGAAACGTTGGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGTGGTTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 90 bp | ACAGACTCAAACCACTGCCGATTCCTGTCCTCCGTCTCAGCTGTTTaGCTGCTTCTCCCATCAGGAGGCCAACGTTTCCAAAAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TDSNHCRFLSSVSAV*LLLPSGGQRFQKDS Trigger: AGAATCCTTTTGGAAACGTTGGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGTGGTTTGAGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 90 bp | GTCGTTCTTGGCAGGGTCATTCACTTCCTCAAAGAACCGGGCCACTaGTCCCACCAGCTCTTTGAGAAATTGTGCCTGTTCTTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVLGRVIHFLKEPGH*SHQLFEKLCLFFTE Trigger: CTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGGTTCTTTGAGGAAGTGAATGACCCTGCCAAGAACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGTTTCTCTCTGGGCCTTaGTGCCATAGAGCAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGFLSGP*CHRARC Trigger: GCATCTTGCTCTATGGCACAAAGGCCCAGAGAGAAA...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGATGGTAAGCTGGCCTTaGAACATCCCCACAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWMVSWP*NIPTAK Trigger: CTTTGCTGTGGGGATGTTCAAAGGCCAGCTTACCAT...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGATGTTGACAGCAACCTaGAAGCCATCTCCCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWMLTAT*KPSPTS Trigger: AGAGGTGGGAGATGGCTTCAAGGTTGCTGTCAACAT...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGATCCCGAATCTTCCGTaGTTGAGGATGTTGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGIPNLP*LRMLTA Trigger: TGCTGTCAACATCCTCAACAACGGAAGATTCGGGAT...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATGTCGAAGAATGTCATTaGCCCCTTCAAAGATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDVEECH*PLQRSG Trigger: TCCGGATCTTTGAAGGGGCAAATGACATTCTTCGAC...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGTTTGTCCATACAGCCTaGCAGAGCCACAAACAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWFVHTA*QSHKQS Trigger: CGACTGTTTGTGGCTCTGCAAGGCTGTATGGACAAA...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATAGCAGGAACTGCTCGTaGACAATCCCTTTCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PHKGFWHQRRHMTLPGPDSRNCS*TIPFLC Trigger: ACACAAGAAAGGGATTGTCAACGAGCAGTTCCTGCT...ATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCAGCTCTTTGAGAAATaGTGCCTGTTCTTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGQLFEK*CLFFTE Trigger: CTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTG...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGGGTCCCACCAGCTCTTaGAGAAATTGTGCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLGPTSS*RNCACS Trigger: AGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACC...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | GTACTCCATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCGTTGTTGAGGATGTaGACAGCAACCTTGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLHHPHKGFWHQRRHMTLPLLRM*TATLKP Trigger: TGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGG...CAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGGAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGTCCGAGCAAAAGATTTaGCTGATGGCGGCTTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWSEQKI*LMAASI Trigger: GATAGAAGCCGCCATCAGCAAAATCTTTTGCTCGGA...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGCCTGATTGGGTGAGTTCCTTTCCTTaGTCCATACAGCCTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKGFWHQRRHMTLPGPDWVSSFP*SIQPCR Trigger: TCTGCAAGGCTGTATGGACAAAGGAAAGGAACTCAC...CCAATCAGGCCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGGACGTGTTAGATGCTTaGATGCCCATCTTCTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGDVLDA*MPIFFS Trigger: TGAAAAGAAGATGGGCATCAAAGCATCTAACACGTC...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS-3UTR CAA 90 bp | CATCACCCCCATAAAGGGTTTTGGCATCAGAGAAGGCACATGACCTTGCCAGGGTCTTTAATTGGCGTCTaGGCAAAGACAGTGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: HHPHKGFWHQRRHMTLPGSLIGV*AKTVKM Trigger: CATTTTCACTGTCTTTGCCAAGACGCCAATTAAAGA...CCCTGGCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS CAA 90 bp | CCACCCAGCTCGCTGGGTACTTGCAGGCCAAATGCCCCCAGTTCCTaGAGTCCCTGCAAAGTGTCGTCCTCCACCTTCTCCAAGGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PPSSLGTCRPNAPSS*SPCKVSSSTFSKAS Trigger: CGACGCCTTGGAGAAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS CCA 72 bp | TCAGGGACCTTGAGGCTCTGGACAGAACCACCACCATaGCATAGAGGTCAATGGCGCCGTCCGCCAGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGTLRLWTEPPP*HRGQWRRPPVA Trigger: AGCGACTGGCGGACGGCGCCATTGACCTCTATGCCATGGTGGTGGTTCTGTCCAGAGCCTCAAGGTCCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 72 bp | TTAGAGAGGCCCAAACCACCCAGCTCGCTGGGTACTTaGAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LERPKPPSSLGT*RPNAPSSLSPC Trigger: GCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTGGGCCTCTCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS TCA 72 bp | CGCTGGGTACTTGCAGGCCAAATGCCCCCAGTTCCTTaGGTCCCTGCAAAGTGTCGTCCTCCACCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWVLAGQMPPVP*VPAKCRPPPSP Trigger: TGGAGAAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS TCA 72 bp | GGCCACCATTCTCCACCATGGCCTTGGAGATGCTTCTaGAGTTCCGGAAGAGCTCCTGATGCTGAGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GHHSPPWPWRCF*SSGRAPDAEGW Trigger: CCAGCCCTCAGCATCAGGAGCTCTTCCGGAACTTCAGAAGCATCTCCAAGGCCATGGTGGAGAATGGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 72 bp | ACTTGCAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTaGAAAGTGTCGTCCTCCACCTTCTCCAAGGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TCRPNAPSSLSP*KVSSSTFSKAS Trigger: CGACGCCTTGGAGAAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 72 bp | CAAACCACCCAGCTCGCTGGGTACTTGCAGGCCAAATaGCCCCAGTTCCTTGAGTCCCTGCAAAGTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QTTQLAGYLQAK*PQFLESLQSVV Trigger: GACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS GCA 72 bp | AGCATCAGAGGAGAGGGTTTCTGGCTTGTCCAGAACTaGCTGAGTGGCCTCCCTGGCATAAAGTCGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIRGEGFWLVQN*LSGLPGIKSLG Trigger: GCCCAGCGACTTTATGCCAGGGAGGCCACTCAGGCAGTTCTGGACAAGCCAGAAACCCTCTCCTCTGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
||
| CDS CAA 72 bp | TCGCTGGGTACTTGCAGGCCAAATGCCCCCAGTTCCTaGAGTCCCTGCAAAGTGTCGTCCTCCACCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGTCRPNAPSS*SPCKVSSSTFS Trigger: GGAGAAGGTGGAGGACGACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS CAA 72 bp | ATTAGAGAGGCCCAAACCACCCAGCTCGCTGGGTACTaGCAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IREAQTTQLAGY*QAKCPQFLESL Trigger: CAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTGGGCCTCTCTAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
||
| CDS CAA 72 bp | GTGTTTCACCAGCTTGGCCTCCACCACGGTGGCAAATaGATCCAGAGCCTGCACTGCCAGTTCACCACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VFHQLGLHHGGK*IQSLHCQFTTA Trigger: CGCAGTGGTGAACTGGCAGTGCAGGCTCTGGATCAATTTGCCACCGTGGTGGAGGCCAAGCTGGTGAAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS TCA 72 bp | TGTTTCACCAGCTTGGCCTCCACCACGGTGGCAAATTaGTCCAGAGCCTGCACTGCCAGTTCACCACTGCGA | + |
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Preference number: 6 (lower is better) Translates to: CFTSLASTTVAN*SRACTASSPLR Trigger: TCGCAGTGGTGAACTGGCAGTGCAGGCTCTGGATCAATTTGCCACCGTGGTGGAGGCCAAGCTGGTGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | ATACTGGGTATTAGAGAGGCCCAAACCACCCAGCTCGCTGGGTACTaGCAGGCCAAATGCCCCCAGTTCCTTGAGTCCCTGCAAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ILGIREAQTTQLAGY*QAKCPQFLESLQSV Trigger: GACACTTTGCAGGGACTCAAGGAACTGGGGGCATTTGGCCTGCAAGTACCCAGCGAGCTGGGTGGTTTGGGCCTCTCTAATACCCAGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | ACTGCCGATTCCTGTCCTCCGTCTCAGCTGTTTGCCTaGTTCTCCCATCAGGAGGCCAACGTTTCCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TADSCPPSQLFA*FSHQEANVSKR Trigger: CCTTTTGGAAACGTTGGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | AACCACTGCCGATTCCTGTCCTCCGTCTCAGCTGTTTaGCTGCTTCTCCCATCAGGAGGCCAACGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: NHCRFLSSVSAV*LLLPSGGQRFQ Trigger: TTGGAAACGTTGGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | AAGTGTCGTCCTCCACCTTCTCCAAGGCGTCGTTCTTaGCAGGGTCATTCACTTCCTCAAAGAACCGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KCRPPPSPRRRS*QGHSLPQRTGP Trigger: TGGCCCGGTTCTTTGAGGAAGTGAATGACCCTGCCAAGAACGACGCCTTGGAGAAGGTGGAGGACGACACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | TCATGCATGCCCACAATCTCTGCCAAGCGAGCATACTaGGTATTAGAGAGGCCCAAACCACCCAGCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SCMPTISAKRAY*VLERPKPPSSL Trigger: CAGCGAGCTGGGTGGTTTGGGCCTCTCTAATACCCAGTATGCTCGCTTGGCAGAGATTGTGGGCATGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 72 bp | AAAGTGTCGTCCTCCACCTTCTCCAAGGCGTCGTTCTaGGCAGGGTCATTCACTTCCTCAAAGAACCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KVSSSTFSKASF*AGSFTSSKNRA Trigger: GGCCCGGTTCTTTGAGGAAGTGAATGACCCTGCCAAGAACGACGCCTTGGAGAAGGTGGAGGACGACACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 72 bp | CCTGCGAGGGTTGCAGCCATCCCGAATCTTCCGTTGTaGAGGATGTTGACAGCAACCTTGAAGCCATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PARVAAIPNLPL*RMLTATLKPSP Trigger: GGGAGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 72 bp | AAACCACTGCCGATTCCTGTCCTCCGTCTCAGCTGTTaGCCTGCTTCTCCCATCAGGAGGCCAACGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: KPLPIPVLRLSC*PASPIRRPTFP Trigger: TGGAAACGTTGGCCTCCTGATGGGAGAAGCAGGCAAACAGCTGAGACGGAGGACAGGAATCGGCAGTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | CCTGCGAGGGTTGCAGCCATCCCGAATCTTCCGTTGTTGAGGATGTaGACAGCAACCTTGAAGCCATCTCCCACCTCTCCTAGCACATTC | + |
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Preference number: 6 (lower is better) Translates to: PARVAAIPNLPLLRM*TATLKPSPTSPSTF Trigger: GAATGTGCTAGGAGAGGTGGGAGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | TTCATGGTGCCTGCGAGGGTTGCAGCCATCCCGAATCTTCCGTTGTaGAGGATGTTGACAGCAACCTTGAAGCCATCTCCCACCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FMVPARVAAIPNLPL*RMLTATLKPSPTSP Trigger: AGGAGAGGTGGGAGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCACCATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | CCGGGCCACTGGTCCCACCAGCTCTTTGAGAAATTGTaGCTGTTCTTCACTGAGCACAGATGGGTATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PGHWSHQLFEKL*LFFTEHRWVWE Trigger: TTCCCATACCCATCTGTGCTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | GGCAGGGTCATTCACTTCCTCAAAGAACCGGGCCACTaGTCCCACCAGCTCTTTGAGAAATTGTGCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GRVIHFLKEPGH*SHQLFEKLCLF Trigger: GAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGGTTCTTTGAGGAAGTGAATGACCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | CTTTCTTGTGTTTCACCAGCTTGGCCTCCACCACGGTaGCAAATTGATCCAGAGCCTGCACTGCCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LSCVSPAWPPPR*QIDPEPALPVH Trigger: GTGAACTGGCAGTGCAGGCTCTGGATCAATTTGCCACCGTGGTGGAGGCCAAGCTGGTGAAACACAAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | CATCCCCACAGCAAAGGACTTCGATTCTGCCCTGGCTaGTTTTTCTCTGGTGGAAGCATCAGAGGAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: HPHSKGLRFCPG*FFSGGSIRGEG Trigger: ACCCTCTCCTCTGATGCTTCCACCAGAGAAAAACCAGCCAGGGCAGAATCGAAGTCCTTTGCTGTGGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS CAA 72 bp | GTGCCTGCGAGGGTTGCAGCCATCCCGAATCTTCCGTaGTTGAGGATGTTGACAGCAACCTTGAAGCCATCT | + |
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Preference number: 6 (lower is better) Translates to: VPARVAAIPNLP*LRMLTATLKPS Trigger: AGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | GATTTCATGGTGCCTGCGAGGGTTGCAGCCATCCCGAATCTTCCGTaGTTGAGGATGTTGACAGCAACCTTGAAGCCATCTCCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: DFMVPARVAAIPNLP*LRMLTATLKPSPTS Trigger: AGAGGTGGGAGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCACCATGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | CTTGGCAATGAGGGATTTCATGGTGCCTGCGAGGGTTaGAGCCATCCCGAATCTTCCGTTGTTGAGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LGNEGFHGACEG*SHPESSVVEDV Trigger: AACATCCTCAACAACGGAAGATTCGGGATGGCTGCAACCCTCGCAGGCACCATGAAATCCCTCATTGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | TGCACTGCCAGTTCACCACTGCGACTTAACTCTGGGTaGACAATCCCTGACAGACTCAAACCACTGCCGATT | + |
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Preference number: 6 (lower is better) Translates to: CTASSPLRLNSG*TIPDRLKPLPI Trigger: AATCGGCAGTGGTTTGAGTCTGTCAGGGATTGTCCACCCAGAGTTAAGTCGCAGTGGTGAACTGGCAGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | AGGACTTCGATTCTGCCCTGGCTGGTTTTTCTCTGGTaGAAGCATCAGAGGAGAGGGTTTCTGGCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTSILPWLVFLW*KHQRRGFLACP Trigger: TGGACAAGCCAGAAACCCTCTCCTCTGATGCTTCCACCAGAGAAAAACCAGCCAGGGCAGAATCGAAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS CAA 72 bp | GTTGCAGCCATCCCGAATCTTCCGTTGTTGAGGATGTaGACAGCAACCTTGAAGCCATCTCCCACCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VAAIPNLPLLRM*TATLKPSPTSP Trigger: AGGAGAGGTGGGAGATGGCTTCAAGGTTGCTGTCAACATCCTCAACAACGGAAGATTCGGGATGGCTGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | GGCACCTTCACTCCATCAAAGTACACCTCTGACGTGTTAGATGCTTaGATGCCCATCTTCTTTTCAGGGAGCCCATGGGTAACCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GTFTPSKYTSDVLDA*MPIFFSGSPWVTPP Trigger: CGGAGGGGTTACCCATGGGCTCCCTGAAAAGAAGATGGGCATCAAAGCATCTAACACGTCAGAGGTGTACTTTGATGGAGTGAAGGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | ATGCACTCATCTGCCACTTTCCAGGCCGCCTCCGAGCAAAAGATTTaGCTGATGGCGGCTTCTATCTGGAAGTCTTTGAATCCCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MHSSATFQAASEQKI*LMAASIWKSLNPWS Trigger: GGACCAGGGATTCAAAGACTTCCAGATAGAAGCCGCCATCAGCAAAATCTTTTGCTCGGAGGCGGCCTGGAAAGTGGCAGATGAGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | TCTCCCATCAGGAGGCCAACGTTTCCAAAAGGATTCTTCAGGGCATaGCCCAGCCCAGTGAGTTCCTTTCCTTTGTCCATACAGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SPIRRPTFPKGFFRA*PSPVSSFPLSIQPC Trigger: GCAAGGCTGTATGGACAAAGGAAAGGAACTCACTGGGCTGGGCAATGCCCTGAAGAATCCTTTTGGAAACGTTGGCCTCCTGATGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 90 bp | TCATTCACTTCCTCAAAGAACCGGGCCACTGGTCCCACCAGCTCTTaGAGAAATTGTGCCTGTTCTTCACTGAGCACAGATGGGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: SFTSSKNRATGPTSS*RNCACSSLSTDGYG Trigger: CCCATACCCATCTGTGCTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGGTTCTTTGAGGAAGTGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | AACGCTAACACCAAGGTCATGCATGCCCACAATCTCTaGCAAGCGAGCATACTGGGTATTAGAGAGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: NANTKVMHAHNL*QASILGIREAQ Trigger: TTGGGCCTCTCTAATACCCAGTATGCTCGCTTGGCAGAGATTGTGGGCATGCATGACCTTGGTGTTAGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | CTTCTCTTTCACGGCCCCCGTGGCTGCATCTTTAATTaGCGTCTTGGCAAAGACAGTGAAAATGTCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLFHGPRGCIFN*RLGKDSENVSQ Trigger: CTGGCTGACATTTTCACTGTCTTTGCCAAGACGCCAATTAAAGATGCAGCCACGGGGGCCGTGAAAGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | CAAAGGACTTCGATTCTGCCCTGGCTGGTTTTTCTCTaGTGGAAGCATCAGAGGAGAGGGTTTCTGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: QRTSILPWLVFL*WKHQRRGFLAC Trigger: ACAAGCCAGAAACCCTCTCCTCTGATGCTTCCACCAGAGAAAAACCAGCCAGGGCAGAATCGAAGTCCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102574.10 |
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| CDS CAA 72 bp | TCCTCAAAGAACCGGGCCACTGGTCCCACCAGCTCTTaGAGAAATTGTGCCTGTTCTTCACTGAGCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSKNRATGPTSS*RNCACSSLSTD Trigger: ATCTGTGCTCAGTGAAGAACAGGCACAATTTCTCAAAGAGCTGGTGGGACCAGTGGCCCGGTTCTTTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 72 bp | TCTGCCACTTTCCAGGCCGCCTCCGAGCAAAAGATTTaGCTGATGGCGGCTTCTATCTGGAAGTCTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SATFQAASEQKI*LMAASIWKSLN Trigger: ATTCAAAGACTTCCAGATAGAAGCCGCCATCAGCAAAATCTTTTGCTCGGAGGCGGCCTGGAAAGTGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CAA 72 bp | AGGAGGCCAACGTTTCCAAAAGGATTCTTCAGGGCATaGCCCAGCCCAGTGAGTTCCTTTCCTTTGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: RRPTFPKGFFRA*PSPVSSFPLSI Trigger: TATGGACAAAGGAAAGGAACTCACTGGGCTGGGCAATGCCCTGAAGAATCCTTTTGGAAACGTTGGCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS GCA 72 bp | AAAAGCTGTGATCTTCTCTTTCACGGCCCCCGTGGCTaGATCTTTAATTGGCGTCTTGGCAAAGACAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KSCDLLFHGPRG*IFNWRLGKDSE Trigger: TTCACTGTCTTTGCCAAGACGCCAATTAAAGATGCAGCCACGGGGGCCGTGAAAGAGAAGATCACAGCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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| CDS CCA 72 bp | AAATTGTGCCTGTTCTTCACTGAGCACAGATGGGTATaGGAACACCTGATCAATGGTAAGCTGGCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: KLCLFFTEHRWV*EHLINGKLAFE Trigger: TTCAAAGGCCAGCTTACCATTGATCAGGTGTTCCCATACCCATCTGTGCTCAGTGAAGAACAGGCACAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018718.8 ENSMUST00000102574.10 |
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