Pregenerated sensors for ACADSB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030861Ensembl transcript IDs: ENSMUST00000015829.15, ENSMUST00000117518.2, ENSMUST00000133277.4
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCACTGCTCTAGACCCTGCTCAATAAGGCACAGCAGCTGGAAATaGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTAC | + |
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Preference number: 1 (lower is better) Translates to: LHCSRPCSIRHSSWK*FVSDAEGPSHSHQY Trigger: GTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTGCCTTATTGAGCAGGGTCTAGAGCAGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR TCA 90 bp | AAGAAAAGTGGGATACATGGGCAGCATCAGGATGGAAGTGGTCACTaGAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: KKSGIHGQHQDGSGH*REKKPVKEKRPPAE Trigger: CTCTGCCGGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR GCA 90 bp | GACGCAGAGGGCCCATCCCACAGTCATCAGTACTCTGCATCGATGTaGTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATAT | + |
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Preference number: 1 (lower is better) Translates to: DAEGPSHSHQYSASM*LAMVFSWMLEAPSY Trigger: ATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGGGCCCTCTGCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR CCA 90 bp | GGCTGCATCATCTCTAAGCCCTGCTCTTTCCCATTATTACAGGAGTaGAAGGTGTCTGCCCTGTCAGGGTCTGCATCCACCCCTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GCIISKPCSFPLLQE*KVSALSGSASTPSF Trigger: AAAGGAAGGGGTGGATGCAGACCCTGACAGGGCAGACACCTTCCACTCCTGTAATAATGGGAAAGAGCAGGGCTTAGAGATGATGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | CAAGTCAGAAATGGGAGCTGGGGTGCAGACATAAAATCTCAGCACTaGAAGCCTGAAAGCAGGATTGCCATGAATCTGCGGCCAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: QVRNGSWGADIKSQH*KPESRIAMNLRPAQ Trigger: CTGGGCTGGCCGCAGATTCATGGCAATCCTGCTTTCAGGCTTCCAGTGCTGAGATTTTATGTCTGCACCCCAGCTCCCATTTCTGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR TCA 90 bp | AGCCCTCTGACTCCTAGTCCTCCACGGGTACAACACTATTCTGTCTaGTGTCACATCCTAGCATCCTCCTCCTCACAGGCTCTCTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: SPLTPSPPRVQHYSV*CHILASSSSQALLV Trigger: TACCAAGAGAGCCTGTGAGGAGGAGGATGCTAGGATGTGACATCAGACAGAATAGTGTTGTACCCGTGGAGGACTAGGAGTCAGAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | AGTTGGAAAGAAAAGTGGGATACATGGGCAGCATCAGGATGGAAGTaGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SWKEKWDTWAASGWK*SLKGEEASQGEEAS Trigger: GGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | GCAGCCAGTTGGAAAGAAAAGTGGGATACATGGGCAGCATCAGGATaGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: AASWKEKWDTWAASG*KWSLKGEEASQGEE Trigger: CTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | CAGAGGGCCCATCCCACAGTCATCAGTACTCTGCATCGATGTGCTTaGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTG | + |
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Preference number: 1 (lower is better) Translates to: QRAHPTVISTLHRCA*RWCSAGCWKLLHIL Trigger: CAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGGGCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR TCA 90 bp | GAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTaGCCACTAGGCTGGATGAGCCCTCTGACTCCTAGTCCTCCACGG | + |
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Preference number: 1 (lower is better) Translates to: ERWHIKGTVQLLYWG*PLGWMSPLTPSPPR Trigger: CCGTGGAGGACTAGGAGTCAGAGGGCTCATCCAGCCTAGTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | CCAGTCAGAATGGCTAAGATCAAAAACTCAGGTGACAGCAGATGTTaGCAAGGAGGTGGAAGAGAAACACCCCTCTACTGCTGGTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: PVRMAKIKNSGDSRC*QGGGRETPLYCWWD Trigger: ATCCCACCAGCAGTAGAGGGGTGTTTCTCTTCCACCTCCTTGCCAACATCTGCTGTCACCTGAGTTTTTGATCTTAGCCATTCTGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR TCA 90 bp | AGAGATCTGCCTTCCTCTGTCTCCCAAGTAATGGGATTAAAGGTGTaGGCCACCACCACCCAGCAGGAAATTCAGTTTTTCAGGATGAGG | + |
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Preference number: 1 (lower is better) Translates to: RDLPSSVSQVMGLKV*ATTTQQEIQFFRMR Trigger: CCTCATCCTGAAAAACTGAATTTCCTGCTGGGTGGTGGTGGCTCACACCTTTAATCCCATTACTTGGGAGACAGAGGAAGGCAGATCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | GCCCATCCCACAGTCATCAGTACTCTGCATCGATGTGCTTGGCGATaGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTGTACCTT | + |
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Preference number: 1 (lower is better) Translates to: AHPTVISTLHRCAWR*CSAGCWKLLHILYL Trigger: AAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR TCA 90 bp | GCACTTCAACTCAAATTTCCAAAGCCTGCTGGGCTCTCTGCAGAATaGCTAAGCTTCTGTAAGGCAAAGGGCACTGTCAAGACAAAACGG | + |
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Preference number: 1 (lower is better) Translates to: ALQLKFPKPAGLSAE*LSFCKAKGTVKTKR Trigger: CCGTTTTGTCTTGACAGTGCCCTTTGCCTTACAGAAGCTTAGTCATTCTGCAGAGAGCCCAGCAGGCTTTGGAAATTTGAGTTGAAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR TCA 90 bp | CCCCTTCCTTTCTTATCACACTCATCTGTCTGTTCTGAGACTGGGTaGGGCCTTTCATCATTTCCCCCATTTGAAAGTCAAGTAGACCTT | + |
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Preference number: 1 (lower is better) Translates to: PLPFLSHSSVCSETG*GLSSFPPFESQVDL Trigger: AAGGTCTACTTGACTTTCAAATGGGGGAAATGATGAAAGGCCTCACCCAGTCTCAGAACAGACAGATGAGTGTGATAAGAAAGGAAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | AGTACTCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTGTACCTTAAACAACAGGGAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: STLHRCAWRWCSAGC*KLLHILYLKQQGEM Trigger: CATTTCTCCCTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR TCA 90 bp | TTGAAAAGCATTCTAGATCATCCCACCCTTACTAAAGGCTTCATGTaGGGTTTTCTGCCTCAATTCTCTGGCACTTCAACTCAAATTTCC | + |
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Preference number: 1 (lower is better) Translates to: LKSILDHPTLTKGFM*GFLPQFSGTSTQIS Trigger: GGAAATTTGAGTTGAAGTGCCAGAGAATTGAGGCAGAAAACCTCACATGAAGCCTTTAGTAAGGGTGGGATGATCTAGAATGCTTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR CCA 90 bp | AGTAATTTATTGAGCATTGCTTGGTTGATGGATGGTGTTGCATTGTaGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTGTTCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: SNLLSIAWLMDGVAL*SRIIKVSIAVTVLP Trigger: CGGGAGAACAGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACCATCCATCAACCAAGCAATGCTCAATAAATTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
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| 3UTR TCA 90 bp | CCAAATGCTGCTAGAGTGAAACTTTTGTATACTCTGCAACTAGGATaGGAAATATGCGTTCAGAAGCTTAGAAATAGACTTAGAGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: PNAARVKLLYTLQLG*EICVQKLRNRLRVD Trigger: ATCTACTCTAAGTCTATTTCTAAGCTTCTGAACGCATATTTCTCATCCTAGTTGCAGAGTATACAAAAGTTTCACTCTAGCAGCATTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
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| 3UTR GCA 90 bp | ACATACTGCTTAAACAGAAACCTGTTCTTATTTGAAGCTATGTCATaGATTTTACTACCCATTTATAGCACAGAAACCTGTTATAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TYCLNRNLFLFEAMS*ILLPIYSTETCYRL Trigger: CAGCCTATAACAGGTTTCTGTGCTATAAATGGGTAGTAAAATGCATGACATAGCTTCAAATAAGAACAGGTTTCTGTTTAAGCAGTATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR GCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCAGGGCTGCCTGCCGTTTaGTCTCCTCGCTGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GTKSRPETRTREVQGSPAGLPAV*SPRCWW Trigger: CCACCAGCAGCGAGGAGAGCAAACGGCAGGCAGCCC...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCATCTCCTCGCTGCTGGTaGAGCACTGGAGCACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GTKSRPETRTREVQGSPASPRCW*STGALR Trigger: CCTGAGTGCTCCAGTGCTCCACCAGCAGCGAGGAGA...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | AACCGCACAGAGATGAGTATGGAAGACACCAAGCACCCCTGCACTTGCTCTCAGTGCTCTCCTCGCTGCTaGTGGAGCACTGGAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: NRTEMSMEDTKHPCTCSQCSPRC*WSTGAL Trigger: GAGTGCTCCAGTGCTCCACCAGCAGCGAGGAGAGCA...CTGAGAGCAAGTGCAGGGGTGCTTGGTGTCTTCCATACTCATCTCTGTGCGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCACCGATGTGCTTGGCGATaGTGTTCAGCTGGATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: EQNPGLRPGQGKSKEALHRCAWR*CSAGCW Trigger: CCAACATCCAGCTGAACACCATCGCCAAGCACATCG...GTGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTACTCTGCATCGATGTaGTTGGCGATGGTGTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSWKWFVSDAEGPSHSHQYSASM*LAMVFS Trigger: GCTGAACACCATCGCCAAGCACATCGATGCAGAGTA...CTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR TCA 90 bp | AACCGCACAGAGATGAGTATGGAAGACACCAAGCACCCCTGCACTTGCTCTCAGAACAAAATCCAGGCCTaGGACCAGGACAAGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: NRTEMSMEDTKHPCTCSQNKIQA*DQDKGS Trigger: ACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTT...CTGAGAGCAAGTGCAGGGGTGCTTGGTGTCTTCCATACTCATCTCTGTGCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTACGCGATGGTGTTCAGCTaGATGTTGGAAGCTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SWKWFVSDAEGPSHSHQYAMVFS*MLEAPS Trigger: TGAAGGAGCTTCCAACATCCAGCTGAACACCATCGC...GTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR CAA 90 bp | GCAGAGGGCCCATCCCACAGTCATCAGTACTCTGCATCGATGTGCTaGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATT | + |
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Preference number: 2 (lower is better) Translates to: AEGPSHSHQYSASMC*AMVFSWMLEAPSYI Trigger: AATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGGGCCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR TCA 90 bp | GATAGTGCAGCCAGTTGGAAAGAAAAGTGGGATACATGGGCAGCATCAGGATGGAACAAAATCCAGGCCTaGGACCAGGACAAGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: DSAASWKEKWDTWAASGWNKIQA*DQDKGS Trigger: ACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTT...CCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACTGGCTGCACTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | GGATGGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCGAGAATTCTCCAAGATaGTCCAACAGCCATGAACTT | + |
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Preference number: 2 (lower is better) Translates to: GWKWSLKGEEASQGEEASENSPR*SNSHEL Trigger: AAGTTCATGGCTGTTGGATCATCTTGGAGAATTCTC...GGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTCTCATCTGTCTGTTCTaGGACTGGGTGAGGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSLICLF*DWVRPF Trigger: GAAAGGCCTCACCCAGTCTCAGAACAGACAGATGAG...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACATGGGATTAAAGGTGTaGGCCACCACCACCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GKDGILKELYNYCTGADHMGLKV*ATTTQQ Trigger: CTGCTGGGTGGTGGTGGCTCACACCTTTAATCCCAT...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCGGCAGAGAAAGTTGGAGTTATaGGAAAAGACTGCAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: EVVTEGRRSQSRRRGLRQRKLEL*EKTANA Trigger: AGCATTTGCAGTCTTTTCCCATAACTCCAACTTTCT...CTGCCGGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCAGGGTCTGCATCCACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTCACCAGCTGGATATCTaGTTAGGCTTTGCCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PVRVCIHPFLSYHTHLSVHQLDI*LGFACF Trigger: AAAACAGGCAAAGCCTAATCAGATATCCAGCTGGTG...AACAGACAGATGAGTGTGATAAGAAAGGAAGGGGTGGATGCAGACCCTGACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACAGCCCAGGTTACACATaGAGCAGGAGGATTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GKDGILKELYNYCTGADHSPGYT*SRRIAM Trigger: CATGGCAATCCTCCTGCTTCATGTGTAACCTGGGCT...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR TCA 90 bp | AGGGTCTATGAACTCAGACTGCCTTGGAACTTGCTTTTAGTCCAGGATGGCTCAACTCAGCCACAAAAGTaGAAGCCGACAAACAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: RVYELRLPWNLLLVQDGSTQPQK*KPTNRD Trigger: ATCCCTGTTTGTCGGCTTTCACTTTTGTGGCTGAGT...TGAGCCATCCTGGACTAAAAGCAAGTTCCAAGGCAGTCTGAGTTCATAGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACGCCTGCTGGGCTCTCTaGAGAATGACTAAGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GKDGILKELYNYCTGADHACWAL*RMTKLL Trigger: CAGAAGCTTAGTCATTCTGCAGAGAGCCCAGCAGGC...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGCCTGTGTGCAAGCCCAGCTaGTTCTACGGACCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LRNRLRVDWKETGTKSRPVCKPS*FYGPSS Trigger: GCTGCTGGGTCCGTAGAAGCAGCTGGGCTTGCACAC...AGGCCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCATACCAATACCTCAAATaGTTTCTTCTTCCCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: GTKSRPETRTREVQGSPAYQYLK*FLLPKC Trigger: GCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTA...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCTATGAACTCAGACTGCCTTGGAACTTGCTTTTAGTCCAGGATGGCTCAGAAAAGTGGGATACATaGGCAGCATCAGGATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RVYELRLPWNLLLVQDGSEKWDT*AASGWK Trigger: CTTCCATCCTGATGCTGCCCATGTATCCCACTTTTC...TGAGCCATCCTGGACTAAAAGCAAGTTCCAAGGCAGTCTGAGTTCATAGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATCCCCTCTACTGCTGGTaGGATTCCAGGGCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AFPAGLQAYTFLYLATFHPLYCW*DSRARK Trigger: CTTCCTGGCCCTGGAATCCCACCAGCAGTAGAGGGG...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTACTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTG | + |
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Preference number: 2 (lower is better) Translates to: SWKWFVSDAEGPSHSHQYCSAGC*KLLHIL Trigger: CAATATATGAAGGAGCTTCCAACATCCAGCTGAACA...GTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTGGATATAAGGATGGATaGGGGGCTACTGGAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSGYKDG*GATGDK Trigger: CTTATCTCCAGTAGCCCCTCATCCATCCTTATATCC...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| 3UTR-3UTR CCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCAAGACTTAGAGTAGATTaGAAAGAGACAGGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GTKSRPETRTREVQGSPARLRVD*KETGTK Trigger: TTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCT...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTAGACTTAGAGTAGATTaGAAAGAGACAGGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: AAGNGLSVTQRAHPTVISRLRVD*KETGTK Trigger: TTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCT...ACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| 3UTR CAA 90 bp | GCTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATaGTACCTTAAACAACAGGGAGAAATGGGACAATTAGGAGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: AWRWCSAGCWKLLHI*YLKQQGEMGQLGVC Trigger: GCACACTCCTAATTGTCCCATTTCTCCCTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACGCAAGTTTTCGTGGGTaGCACTGGGATAGAAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GKDGILKELYNYCTGADHASFRG*HWDRNR Trigger: TCTGTTTCTATCCCAGTGTCACCCACGAAAACTTGC...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTCTATGAACTCAGACTGCCTTGGAACTTGCTTTTAGTCCAGGATGGCTCAATCATCTCTAAGCCCTaGTCTTTCCCATTATTACAG | + |
|
Preference number: 2 (lower is better) Translates to: RVYELRLPWNLLLVQDGSIISKP*SFPLLQ Trigger: CTGTAATAATGGGAAAGAGCAGGGCTTAGAGATGAT...TGAGCCATCCTGGACTAAAAGCAAGTTCCAAGGCAGTCTGAGTTCATAGACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTGCCTTCTGAAATTAGAACCATACTTCAAAGAGCAGTATTAGACTCCAGGCACAGCAGCTGGAAATaGTTTGTCAGTGACGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KLPSEIRTILQRAVLDSRHSSWK*FVSDAE Trigger: CTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTG...CCTGGAGTCTAATACTGCTCTTTGAAGTATGGTTCTAATTTCAGAAGGCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTAGTTGGAAAGAAAAGTaGGATACATGGGCAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSSWKEK*DTWAAS Trigger: TGATGCTGCCCATGTATCCCACTTTTCTTTCCAACT...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGCCTCACAGCAGCTGGAAATaGTTTGTCAGTGACGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRNRLRVDWKETGTKSRPHSSWK*FVSDAE Trigger: CTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTG...AGGCCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACGATAGTGCAGCCAGTTaGAAAGAAAAGTGGGATACA | + |
|
Preference number: 2 (lower is better) Translates to: GKDGILKELYNYCTGADHDSAAS*KEKWDT Trigger: TGTATCCCACTTTTCTTTCCAACTGGCTGCACTATC...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATGTCAGAAATGGGAGCTaGGGTGCAGACATAAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: AFPAGLQAYTFLYLATFHVRNGS*GADIKS Trigger: AGATTTTATGTCTGCACCCCAGCTCCCATTTCTGAC...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTTGTCAATTTGTATTTTaGTATTCTGCCCTGATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSCQFVF*YSALMV Trigger: AACCATCAGGGCAGAATACCAAAATACAAATTGACA...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CAA 90 bp | AGCAGTAATTTATTGAGCATTGCTTGGTTGATGGATGGTGTTGCATaGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SSNLLSIAWLMDGVA*WSRIIKVSIAVTVL Trigger: GAGAACAGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACCATCCATCAACCAAGCAATGCTCAATAAATTACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| 3UTR GCA 72 bp | CCCAGCTGCTTCTACGGACCCAGCAGCTTTCAGGGCTaGCTGCCGTTTGCTCTCCTCGCTGCTGGTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSCFYGPSSFQG*LPFALLAAGGA Trigger: TGCTCCACCAGCAGCGAGGAGAGCAAACGGCAGGCAGCCCTGAAAGCTGCTGGGTCCGTAGAAGCAGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | TGGCAAGGAGGTGGAAGAGAAACACCCCTCTACTGCTaGTGGGATTCCAGGGCCAGGAAGCAGGAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WQGGGRETPLYC*WDSRARKQEWV Trigger: CACCCACTCCTGCTTCCTGGCCCTGGAATCCCACCAGCAGTAGAGGGGTGTTTCTCTTCCACCTCCTTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR GCA 72 bp | TGTTGGCAAGGAGGTGGAAGAGAAACACCCCTCTACTaGTGGTGGGATTCCAGGGCCAGGAAGCAGGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CWQGGGRETPLY*WWDSRARKQEW Trigger: CCACTCCTGCTTCCTGGCCCTGGAATCCCACCAGCAGTAGAGGGGTGTTTCTCTTCCACCTCCTTGCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR GCA 72 bp | AGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCACTaGTCTAGACCCTGCTCAATAAGGCACAGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RPGQGKSKEALH*SRPCSIRHSSW Trigger: CCAGCTGCTGTGCCTTATTGAGCAGGGTCTAGAGCAGTGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTTCTGCATCGATGTGCTaGGCGATGGTGTTCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AAGNGLSVTQRAHPTVISSASMC*AMVFSW Trigger: CCAGCTGAACACCATCGCCAAGCACATCGATGCAGA...ACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | CACTGCTCTAGACCCTGCTCAATAAGGCACAGCAGCTaGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: HCSRPCSIRHSS*KWFVSDAEGPS Trigger: GGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTGCCTTATTGAGCAGGGTCTAGAGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR GCA 72 bp | GGGAAGTCCAAGGAAGCCCTGCACTGCTCTAGACCCTaGTCAATAAGGCACAGCAGCTGGAAATGGTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GKSKEALHCSRP*SIRHSSWKWFV Trigger: GACAAACCATTTCCAGCTGCTGTGCCTTATTGAGCAGGGTCTAGAGCAGTGCAGGGCTTCCTTGGACTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR GCA 72 bp | GGCCCATCCCACAGTCATCAGTACTCTGCATCGATGTaGTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPSHSHQYSASM*LAMVFSWMLEA Trigger: AGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | TCTAGACCCTGCTCAATAAGGCACAGCAGCTGGAAATaGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRPCSIRHSSWK*FVSDAEGPSHS Trigger: ACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTGCCTTATTGAGCAGGGTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | CAGCCCACTAACACCAGCTTTGAACAGACGAGGACTTaGCTCTTTGAGCATCAGTGTGCAAGCCCAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QPTNTSFEQTRT*LFEHQCASPAA Trigger: AGCAGCTGGGCTTGCACACTGATGCTCAAAGAGCCAAGTCCTCGTCTGTTCAAAGCTGGTGTTAGTGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTACCAAGCACCCCTGCACTaGCTCTCAGTAACAGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: SWKWFVSDAEGPSHSHQYQAPLH*LSVTGF Trigger: GAATCCTGTTACTGAGAGCAAGTGCAGGGGTGCTTG...GTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR TCA 72 bp | CTCAATAAGGCACAGCAGCTGGAAATGGTTTGTCAGTaGCGCAGAGGGCCCATCCCACAGTCATCAGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: LNKAQQLEMVCQ*RRGPIPQSSVL Trigger: GAGTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCTGTGCCTTATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR GCA 72 bp | CTGCTCTTTCCCATTATTACAGGAGTGGAAGGTGTCTaGCCTGTCAGGGTCTGCATCCACCCCTTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLFPIITGVEGV*PVRVCIHPFLS Trigger: AGAAAGGAAGGGGTGGATGCAGACCCTGACAGGGCAGACACCTTCCACTCCTGTAATAATGGGAAAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR GCA 72 bp | CATCCTGACTCCCGCGGCTGCATCATCTCTAAGCCCTaGTCTTTCCCATTATTACAGGAGTGGAAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HPDSRGCIISKP*SFPLLQEWKVS Trigger: AGACACCTTCCACTCCTGTAATAATGGGAAAGAGCAGGGCTTAGAGATGATGCAGCCGCGGGAGTCAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR GCA 72 bp | GAGGGCAGGCTGTTTACTCATCCTGACTCCCGCGGCTaGATCATCTCTAAGCCCTGCTCTTTCCCATTATTA | + |
|
Preference number: 3 (lower is better) Translates to: EGRLFTHPDSRG*IISKPCSFPLL Trigger: TAATAATGGGAAAGAGCAGGGCTTAGAGATGATGCAGCCGCGGGAGTCAGGATGAGTAAACAGCCTGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | ACAGGCTCTCTTGGTAAGAAGGCAAAGGAAGCGCCATaGAGCCTCACTTATGGGGGTGGAAGTAAGGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGSLGKKAKEAP*SLTYGGGSKVS Trigger: ACTCACCTTACTTCCACCCCCATAAGTGAGGCTCCATGGCGCTTCCTTTGCCTTCTTACCAAGAGAGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | ACTCCTAGTCCTCCACGGGTACAACACTATTCTGTCTaGTGTCACATCCTAGCATCCTCCTCCTCACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPSPPRVQHYSV*CHILASSSSQA Trigger: AGCCTGTGAGGAGGAGGATGCTAGGATGTGACATCAGACAGAATAGTGTTGTACCCGTGGAGGACTAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | CATCCCACAGTCATCAGTACTCTGCATCGATGTGCTTaGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: HPTVISTLHRCA*RWCSAGCWKLL Trigger: AAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | GAAAAGTGGGATACATGGGCAGCATCAGGATGGAAGTaGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EKWDTWAASGWK*SLKGEEASQGE Trigger: TTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | GCTCTAGAGGATAGTGCAGCCAGTTGGAAAGAAAAGTaGGATACATGGGCAGCATCAGGATGGAAGTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALEDSAASWKEK*DTWAASGWKWS Trigger: TGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACTGGCTGCACTATCCTCTAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CAA 90 bp | CCCACAGCTGAAGAGAACCGCACAGAGATGAGTATGGAAGACACCAAGCACCCCGCTAGAGTGAAACTTTaGTATACTCTGCAACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTAEENRTEMSMEDTKHPARVKL*YTLQLG Trigger: TCCTAGTTGCAGAGTATACAAAAGTTTCACTCTAGC...GGGGTGCTTGGTGTCTTCCATACTCATCTCTGTGCGGTTCTCTTCAGCTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR TCA 72 bp | CCTTCCTCTGTCTCCCAAGTAATGGGATTAAAGGTGTaGGCCACCACCACCCAGCAGGAAATTCAGTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PSSVSQVMGLKV*ATTTQQEIQFF Trigger: GAAAAACTGAATTTCCTGCTGGGTGGTGGTGGCTCACACCTTTAATCCCATTACTTGGGAGACAGAGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | CTCAAATTTCCAAAGCCTGCTGGGCTCTCTGCAGAATaGCTAAGCTTCTGTAAGGCAAAGGGCACTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKFPKPAGLSAE*LSFCKAKGTVK Trigger: CTTGACAGTGCCCTTTGCCTTACAGAAGCTTAGTCATTCTGCAGAGAGCCCAGCAGGCTTTGGAAATTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | TGGAAAGAAAAGTGGGATACATGGGCAGCATCAGGATaGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WKEKWDTWAASG*KWSLKGEEASQ Trigger: TTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | GATATCCTCACTGCTCTAGAGGATAGTGCAGCCAGTTaGAAAGAAAAGTGGGATACATGGGCAGCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DILTALEDSAAS*KEKWDTWAASG Trigger: TCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACTGGCTGCACTATCCTCTAGAGCAGTGAGGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | ACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTCTaGGACTGGGTGAGGCCTTTCATCATTTCCCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: TPSFLITLICLF*DWVRPFIISPI Trigger: AATGGGGGAAATGATGAAAGGCCTCACCCAGTCTCAGAACAGACAGATGAGTGTGATAAGAAAGGAAGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | CATATTAAAGGAACTGTACAACTATTGTACTGGGGCTaGCCACTAGGCTGGATGAGCCCTCTGACTCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: HIKGTVQLLYWG*PLGWMSPLTPS Trigger: ACTAGGAGTCAGAGGGCTCATCCAGCCTAGTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR GCA 72 bp | ACTGGAGATAAGGCAGCCACAGTCCATTTCCAGACCTaGACAGCAGTGGCTCACAGGAATTTAGAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGDKAATVHFQT*TAVAHRNLESF Trigger: AAAACTTTCTAAATTCCTGTGAGCCACTGCTGTGCAGGTCTGGAAATGGACTGTGGCTGCCTTATCTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | ACAGTCATCAGTACTCTGCATCGATGTGCTTGGCGATaGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: TVISTLHRCAWR*CSAGCWKLLHI Trigger: TATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR CCA 72 bp | GCAGTAGGTATATGTCTTCCCAGAAGGTCTTTGGGATaGAAATGGGCATCAGTGATGAACTCTGAGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: AVGICLPRRSLG*KWASVMNSENM Trigger: CATGTTCTCAGAGTTCATCACTGATGCCCATTTCCATCCCAAAGACCTTCTGGGAAGACATATACCTACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | GTCTTTGGGATGGAAATGGGCATCAGTGATGAACTCTaGGAACATGTAGAGAAAGTTCCCTTTCTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VFGMEMGISDEL*EHVEKVPFLFL Trigger: GAGGAAGAGAAAGGGAACTTTCTCTACATGTTCTCAGAGTTCATCACTGATGCCCATTTCCATCCCAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | CATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTGTACCTTAAACAACAG | + |
|
Preference number: 3 (lower is better) Translates to: HRCAWRWCSAGC*KLLHILYLKQQ Trigger: CTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| 3UTR TCA 72 bp | TTCTTATCACACTCATCTGTCTGTTCTGAGACTGGGTaGGGCCTTTCATCATTTCCCCCATTTGAAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLSHSSVCSETG*GLSSFPPFESQ Trigger: TTGACTTTCAAATGGGGGAAATGATGAAAGGCCTCACCCAGTCTCAGAACAGACAGATGAGTGTGATAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR TCA 72 bp | ATTCTAGATCATCCCACCCTTACTAAAGGCTTCATGTaGGGTTTTCTGCCTCAATTCTCTGGCACTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ILDHPTLTKGFM*GFLPQFSGTST Trigger: AGTTGAAGTGCCAGAGAATTGAGGCAGAAAACCTCACATGAAGCCTTTAGTAAGGGTGGGATGATCTAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CCA 72 bp | TGCGTTCAGAAGCTTAGAAATAGACTTAGAGTAGATTaGAAAGAGACAGGAACAAAATCCAGGCCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: CVQKLRNRLRVD*KETGTKSRPET Trigger: GGTCTCAGGCCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAGCTTCTGAACGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAAGATGGCATATTAAAGGAACTGTACAACTATTGTACTGGGGCTGACCACGCTAGAGTGAAACTTTaGTATACTCTGCAACTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKDGILKELYNYCTGADHARVKL*YTLQLG Trigger: TCCTAGTTGCAGAGTATACAAAAGTTTCACTCTAGC...GTGGTCAGCCCCAGTACAATAGTTGTACAGTTCCTTTAATATGCCATCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGGTGTTCAGCTGGATGTaGGAAGCTCCTTCATATATT | + |
|
Preference number: 3 (lower is better) Translates to: KLRNRLRVDWKETGTKSRVFSWM*EAPSYI Trigger: AATATATGAAGGAGCTTCCAACATCCAGCTGAACAC...CCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | CCCACAGCTGAAGAGAACCGCACAGAGATGAGTATGGAAGACACCAAGCACCCCAGCTGGGTGGCCACCTaGGCCACTTGGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAEENRTEMSMEDTKHPSWVAT*ATWCWS Trigger: GCTCCAACACCAAGTGGCTCAGGTGGCCACCCAGCT...GGGGTGCTTGGTGTCTTCCATACTCATCTCTGTGCGGTTCTCTTCAGCTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCCCGGTTGTGAGGATTTaGGGACACGAGGAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GWKWSLKGEEASQGEEASPVVRI*GHEEES Trigger: AGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGG...GGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCAAGGAGACAAGCAGGTTaGGAAGCGTCTTCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKSRPETRTREVQGSPARRQAG*EASSQQ Trigger: CTGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCT...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTCTGCATGCTCGGCATaGCTGATCCACATCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSWKWFVSDAEGPSHSHQSACSA*LIHIFD Trigger: GTCGAAGATGTGGATCAGCCATGCCGAGCATGCAGA...CTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTCAGGGTCTGCATCCACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTTGGCTTCCAGCTGGGTaGCCACCTGAGCCACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRVCIHPFLSYHTHLSVWLPAG*PPEPLG Trigger: ACCAAGTGGCTCAGGTGGCCACCCAGCTGGAAGCCA...AACAGACAGATGAGTGTGATAAGAAAGGAAGGGGTGGATGCAGACCCTGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR GCA 90 bp | GAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCACCTCCCATCCACTCGATaGACTTGCTTGTTGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQNPGLRPGQGKSKEALHLPSTR*TCLLLA Trigger: GGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAG...GTGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCATACTCTGCATCGATGTaGTTGGCGATGGTGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTKSRPETRTREVQGSPAYSASM*LAMVFS Trigger: GCTGAACACCATCGCCAAGCACATCGATGCAGAGTA...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| 3UTR CAA 72 bp | CCATCCCACAGTCATCAGTACTCTGCATCGATGTGCTaGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSHSHQYSASMC*AMVFSWMLEAP Trigger: AGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTGATGACTGTGGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | ACAACTCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAAGCTGGGTGGCCACCTaGGCCACTTGGTGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLRFHLTPVRMAKIKNSSWVAT*ATWCWS Trigger: GCTCCAACACCAAGTGGCTCAGGTGGCCACCCAGCT...TGAGTTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGAGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR GCA 90 bp | GAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCACAAGTGTCTGCAGAGGTaGAAAGGCTACTGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQNPGLRPGQGKSKEALHKCLQR*KGYCIV Trigger: AACAATGCAGTAGCCTTTGCACCTCTGCAGACACTT...GTGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAAAATCCAGGCCTGAGACCAGGACAAGGGAAGTCCAAGGAAGCCCTGCAGCTTTGGCAAATAGGTaGCCTTCTGTTCTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKSRPETRTREVQGSPAALANR*PSVLLK Trigger: CTTCAGAAGAACAGAAGGCCACCTATTTGCCAAAGC...TGCAGGGCTTCCTTGGACTTCCCTTGTCCTGGTCTCAGGCCTGGATTTTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCTCTCGTTTCCCTATCTaGAAACCTTCTGTATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GWKWSLKGEEASQGEEASSRFPI*KPSVSR Trigger: CCGAGATACAGAAGGTTTCCAGATAGGGAAACGAGA...GGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GGATGGAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCTGCTTCTTTTATAAATaGCCTTCCGGCTTCTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWKWSLKGEEASQGEEASCFFYK*PSGFYE Trigger: CTCGTAGAAGCCGGAAGGCCATTTATAAAAGAAGCA...GGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAACCGCACAGAGATGAGTATGGAAGACACCAAGCACCCCTGCACTTGCCCCAAATACCCACAGTaGCAAATAAAACAGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EENRTEMSMEDTKHPCTCPKYPQ*QIKQET Trigger: GGTCTCCTGTTTTATTTGCCACTGTGGGTATTTGGG...GCAAGTGCAGGGGTGCTTGGTGTCTTCCATACTCATCTCTGTGCGGTTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTTTTTCAAATGTTAACTaGCAGGTGGATGAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAGNGLSVTQRAHPTVISFSNVN*QVDEAL Trigger: CAGAGCTTCATCCACCTGTCAGTTAACATTTGAAAA...ACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAAATGGTTTGTCAGTGACGCAGAGGGCCCATCCCACAGTCATCAGTACTGGTGTTGGAGCCCCTaGAAATCAAATATTCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWKWFVSDAEGPSHSHQYWCWSP*KSNIRL Trigger: CAAACGAATATTTGATTTTCAGGGGCTCCAACACCA...GTACTGATGACTGTGGGATGGGCCCTCTGCGTCACTGACAAACCATTTCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCCTTCTGAAATTAGAACCATACTTCAAAGAGCAGTATTAGACTCCAGGTGGCTTCCAGCTGGGTaGCCACCTGAGCCACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLPSEIRTILQRAVLDSRWLPAG*PPEPLG Trigger: ACCAAGTGGCTCAGGTGGCCACCCAGCTGGAAGCCA...CCTGGAGTCTAATACTGCTCTTTGAAGTATGGTTCTAATTTCAGAAGGCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATGTCCCTCCATATTGTaGTTCAACTTCAATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SASMCLAMVFSWMLEAPSCPSIL*FNFNAH Trigger: ATGGGCATTGAAGTTGAAGCACAATATGGAGGGACA...TGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | TGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTGTACCTTAAAGACCAGGAAGAGCTCTaGATGCTCGGCATGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WRWCSAGCWKLLHILYLKDQEEL*MLGMAD Trigger: ATCAGCCATGCCGAGCATGCAGAGCTCTTCCTGGTC...TTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCATTGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTGTTCTCCCGAGGAGACAAGCAGGTTaGGAAGCGTCTTCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VALWSRIIKVSIAVTVLPRRQAG*EASSQQ Trigger: CTGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCT...CGGGAGAACAGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR CCA 90 bp | ACTCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTTGCTTCTTTTATAAATaGCCTTCCGGCTTCTACGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLHRCAWRWCSAGCWKLLCFFYK*PSGFYE Trigger: CTCGTAGAAGCCGGAAGGCCATTTATAAAAGAAGCA...AAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTATGAACTCAGACTGCCTTGGAACTTGCTTTTAGTCCAGGATGGCTCATCATCAGTAAGTGTCTaGAGAGGTGCAAAGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: RVYELRLPWNLLLVQDGSSSVSV*RGAKAT Trigger: AGTAGCCTTTGCACCTCTGCAGACACTTACTGATGA...TGAGCCATCCTGGACTAAAAGCAAGTTCCAAGGCAGTCTGAGTTCATAGACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | ACAACTCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCATCTGCATGCTCGGCATaGCTGATCCACATCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTLRFHLTPVRMAKIKNSSACSA*LIHIFD Trigger: GTCGAAGATGTGGATCAGCCATGCCGAGCATGCAGA...TGAGTTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGAGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GGATGTTGGAAGCTCCTTCATATATTGTACCTTAAACAACAGGGAGAAATGGGACCACAGGGTAATCTTTaGTGTAGCCGACCCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCWKLLHILYLKQQGEMGPQGNL*CSRPLP Trigger: TGGGAGGGGTCGGCTACACCAAAGATTACCCTGTGG...TCCCATTTCTCCCTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | ATGGATGGTGTTGCATTGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTCCGGTTGTGAGGATTTaGGGACACGAGGAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: MDGVALWSRIIKVSIAVTPVVRI*GHEEES Trigger: AGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGG...AGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACCATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR GCA 90 bp | ACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTAGAGTGAAACTTTTGGACCAGGAAGAGCTCTaGATGCTCGGCATGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNTSNGFFFPNAARVKLLDQEEL*MLGMAD Trigger: ATCAGCCATGCCGAGCATGCAGAGCTCTTCCTGGTC...CAAAAGTTTCACTCTAGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | TCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTCCCAGCGACCTCAGATaGATAATATTTGGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMCLAMVFSWMLEAPSYIPSDLR*IIFGHR Trigger: TCTATGGCCAAATATTATGCATCTGAGGTCGCTGGG...AATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGTGTGCCCACAGCTGAAGAGAACCGCACAGAGATGAGTATGGAAGACTTAATTATTGTGTTCTaGATGTCACACAGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRSVPTAEENRTEMSMEDLIIVF*MSHRRA Trigger: GGCTCTCCTGTGTGACATCCAGAACACAATAATTAA...GTCTTCCATACTCATCTCTGTGCGGTTCTCTTCAGCTGTGGGCACACTCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTTTCTGTAACCAGCTTTaGCAAATAGGTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSFCNQL*QIGGLL Trigger: CAGAAGGCCACCTATTTGCCAAAGCTGGTTACAGAA...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATCCACAGGGTAATCTTTaGTGTAGCCGACCCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFPAGLQAYTFLYLATFHPQGNL*CSRPLP Trigger: TGGGAGGGGTCGGCTACACCAAAGATTACCCTGTGG...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | ACAACTCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAGCGATGGTGTTCAGCTaGATGTTGGAAGCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLRFHLTPVRMAKIKNSAMVFS*MLEAPS Trigger: TGAAGGAGCTTCCAACATCCAGCTGAACACCATCGC...TGAGTTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGAGTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR TCA 90 bp | TCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTAGGTGGATGAAGCTCTaGTGCCCATTTTATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMCLAMVFSWMLEAPSYIRWMKL*CPFYFL Trigger: GAGAAAATAAAATGGGCATCAGAGCTTCATCCACCT...AATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGTCAGCAATACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTAGGAGACAAGCAGGTTaGGAAGCGTCTTCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVSNTNTSNGFFFPNAARRQAG*EASSQQ Trigger: CTGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCT...AGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTATTGCTGACAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | GATAGTGCAGCCAGTTGGAAAGAAAAGTGGGATACATGGGCAGCATCAGGATGGATATTGTACCGATCTTaGCATCTCGGAAGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSAASWKEKWDTWAASGWILYRS*HLGRIS Trigger: AGAAATTCTTCCGAGATGCCAAGATCGGTACAATAT...CCATCCTGATGCTGCCCATGTATCCCACTTTTCTTTCCAACTGGCTGCACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR TCA 90 bp | ACTATTTCTGTCAGCAATACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTCCGGTTGTGAGGATTTaGGGACACGAGGAGGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TISVSNTNTSNGFFFPNAPVVRI*GHEEES Trigger: AGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGG...AGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTATTGCTGACAGAAATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR CAA 72 bp | CCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTaGAAAAGCATTCTAGATCATCCCACCCTTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTRGLLALEMSL*KSILDHPTLTK Trigger: TTTAGTAAGGGTGGGATGATCTAGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR GCA 90 bp | ATGGATGGTGTTGCATTGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTAAGTGTCTGCAGAGGTaGAAAGGCTACTGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MDGVALWSRIIKVSIAVTKCLQR*KGYCIV Trigger: AACAATGCAGTAGCCTTTGCACCTCTGCAGACACTT...AGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACCATCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR GCA 90 bp | GGATGTTGGAAGCTCCTTCATATATTGTACCTTAAACAACAGGGAGAAATGGGATCATCAGTAAGTGTCTaGAGAGGTGCAAAGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GCWKLLHILYLKQQGEMGSSVSV*RGAKAT Trigger: AGTAGCCTTTGCACCTCTGCAGACACTTACTGATGA...TCCCATTTCTCCCTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGCTCCCATCCACTCGATaGACTTGCTTGTTGTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLRNRLRVDWKETGTKSRLPSTR*TCLLLA Trigger: GGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAG...CCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAATTTATTGAGCATTGCTTGGTTGATGGATGGTGTTGCATTGTGGTCTGCTTTGGCAAATAGGTaGCCTTCTGTTCTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSNLLSIAWLMDGVALWSALANR*PSVLLK Trigger: CTTCAGAAGAACAGAAGGCCACCTATTTGCCAAAGC...AGACCACAATGCAACACCATCCATCAACCAAGCAATGCTCAATAAATTACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGTAATTTATTGAGCATTGCTTGGTTGATGGATGGTGTTGCATTGTGGTCTTTCTGTAACCAGCTTTaGCAAATAGGTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSNLLSIAWLMDGVALWSFCNQL*QIGGLL Trigger: CAGAAGGCCACCTATTTGCCAAAGCTGGTTACAGAA...AGACCACAATGCAACACCATCCATCAACCAAGCAATGCTCAATAAATTACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCCTTCTGAAATTAGAACCATACTTCAAAGAGCAGTATTAGACTCCAGGTCTCGTTTCCCTATCTaGAAACCTTCTGTATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPSEIRTILQRAVLDSRSRFPI*KPSVSR Trigger: CCGAGATACAGAAGGTTTCCAGATAGGGAAACGAGA...CCTGGAGTCTAATACTGCTCTTTGAAGTATGGTTCTAATTTCAGAAGGCAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCACCAAAATACTTTCTATCTAGAAGTAACGATTATTTCCAGCAACTGCCGATGTGCTTGGCGATaGTGTTCAGCTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKHQNTFYLEVTIISSNCRCAWR*CSAGCW Trigger: CCAACATCCAGCTGAACACCATCGCCAAGCACATCG...GCAGTTGCTGGAAATAATCGTTACTTCTAGATAGAAAGTATTTTGGTGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR TCA 90 bp | TGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTGTACCTTAAACGATTTCTCCATTTTTaGGTTCTCATCCATAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WRWCSAGCWKLLHILYLKRFLHF*VLIHRG Trigger: TCCTCTATGGATGAGAACTCAAAAATGGAGAAATCG...TTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR GCA 90 bp | GATGGTGTTGCATTGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTGTTTGTCCCTCCATATTGTaGTTCAACTTCAATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGVALWSRIIKVSIAVTVCPSIL*FNFNAH Trigger: ATGGGCATTGAAGTTGAAGCACAATATGGAGGGACA...AACAGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR GCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATCCCAGCGACCTCAGATaGATAATATTTGGCCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFPAGLQAYTFLYLATFHPSDLR*IIFGHR Trigger: TCTATGGCCAAATATTATGCATCTGAGGTCGCTGGG...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | ACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTAGAGTGAAACTTTTGGCTTTGGCAAATAGGTaGCCTTCTGTTCTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNTSNGFFFPNAARVKLLALANR*PSVLLK Trigger: CTTCAGAAGAACAGAAGGCCACCTATTTGCCAAAGC...CAAAAGTTTCACTCTAGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTCCCAAATGCTGCTAGAGTGAAACTTTTGTATACTCTGCAACTAGGATTCTGTAACCAGCTTTaGCAAATAGGTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFFPNAARVKLLYTLQLGFCNQL*QIGGLL Trigger: CAGAAGGCCACCTATTTGCCAAAGCTGGTTACAGAA...TCCTAGTTGCAGAGTATACAAAAGTTTCACTCTAGCAGCATTTGGGAAGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATAGGTGGATGAAGCTCTaGTGCCCATTTTATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFPAGLQAYTFLYLATFHRWMKL*CPFYFL Trigger: GAGAAAATAAAATGGGCATCAGAGCTTCATCCACCT...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR GCA 90 bp | AATACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTAGAGTGAAACTTAAGTGTCTGCAGAGGTaGAAAGGCTACTGCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTNTSNGFFFPNAARVKLKCLQR*KGYCIV Trigger: AACAATGCAGTAGCCTTTGCACCTCTGCAGACACTT...AAGTTTCACTCTAGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR CAA 72 bp | TGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATaGTACCTTAAACAACAGGGAGAAATGGGACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: WCSAGCWKLLHI*YLKQQGEMGQL Trigger: TAATTGTCCCATTTCTCCCTGTTGTTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATCGATTTCTCCATTTTTaGGTTCTCATCCATAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFPAGLQAYTFLYLATFHRFLHF*VLIHRG Trigger: TCCTCTATGGATGAGAACTCAAAAATGGAGAAATCG...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCCAGCAGGACTTCAAGCATACACTTTTCTATATCTAGCAACCTTTCATTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTG | + |
|
Preference number: 4 (lower is better) Translates to: AFPAGLQAYTFLYLATFHCSAGC*KLLHIL Trigger: CAATATATGAAGGAGCTTCCAACATCCAGCTGAACA...ATGAAAGGTTGCTAGATATAGAAAAGTGTATGCTTGAAGTCCTGCTGGAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR TCA 90 bp | AAGCTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGTTTTCAAATGTTAACTaGCAGGTGGATGAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLRNRLRVDWKETGTKSRFSNVN*QVDEAL Trigger: CAGAGCTTCATCCACCTGTCAGTTAACATTTGAAAA...CCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCACCAAAATACTTTCTATCTAGAAGTAACGATTATTTCCAGCAACTGCTGGTGTTGGAGCCCCTaGAAATCAAATATTCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKHQNTFYLEVTIISSNCWCWSP*KSNIRL Trigger: CAAACGAATATTTGATTTTCAGGGGCTCCAACACCA...GCAGTTGCTGGAAATAATCGTTACTTCTAGATAGAAAGTATTTTGGTGCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCACCAAAATACTTTCTATCTAGAAGTAACGATTATTTCCAGCAACTGCTGTCCCTCCATATTGTaGTTCAACTTCAATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKHQNTFYLEVTIISSNCCPSIL*FNFNAH Trigger: ATGGGCATTGAAGTTGAAGCACAATATGGAGGGACA...GCAGTTGCTGGAAATAATCGTTACTTCTAGATAGAAAGTATTTTGGTGCTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CCA 90 bp | ACTATTTCTGTCAGCAATACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTTTAATTATTGTGTTCTaGATGTCACACAGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TISVSNTNTSNGFFFPNALIIVF*MSHRRA Trigger: GGCTCTCCTGTGTGACATCCAGAACACAATAATTAA...AGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTATTGCTGACAGAAATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| 3UTR CAA 72 bp | GGCTCACAGGAATTTAGAAAGTTTTGTGAAATGGGGTaGAGGTCAGTTGGATTCAAATTTATAATATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQEFRKFCEMG*RSVGFKFIIFL Trigger: CAGGAATATTATAAATTTGAATCCAACTGACCTCAACCCCATTTCACAAAACTTTCTAAATTCCTGTGAGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS GCA 90 bp | GTAGCCAGAGCTGGGGTCCACATTGGCGAAGACCAGGAAGAGCTCTaGATGCTCGGCATGGCTGATCCACATCTTCGACCCATTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VARAGVHIGEDQEEL*MLGMADPHLRPIED Trigger: GTCCTCAATGGGTCGAAGATGTGGATCAGCCATGCCGAGCATGCAGAGCTCTTCCTGGTCTTCGCCAATGTGGACCCCAGCTCTGGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | ACGAGGACTTGGCTCTTTGAGCATCAGTGTGCAAGCCCAGCTGCTTCTACGGACCTGAGCCACTTGGTGTaGGAGCCCCTGAAAATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TRTWLFEHQCASPAASTDLSHLV*EPLKIK Trigger: TTTGATTTTCAGGGGCTCCAACACCAAGTGGCTCAG...GTCCGTAGAAGCAGCTGGGCTTGCACACTGATGCTCAAAGAGCCAAGTCCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTCAGGGTCTGCATCCACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTTCTGCATCGATGTGCTaGGCGATGGTGTTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVRVCIHPFLSYHTHLSVSASMC*AMVFSW Trigger: CCAGCTGAACACCATCGCCAAGCACATCGATGCAGA...AACAGACAGATGAGTGTGATAAGAAAGGAAGGGGTGGATGCAGACCCTGACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS GCA 90 bp | CCACAGGGTAATCTTTGGTGTAGCCGACCCCTCCCATCCACTCGATaGACTTGCTTGTTGTTAGCCCAGCGACCTCAGATGCATAATATT | + |
|
Preference number: 5 (lower is better) Translates to: PQGNLWCSRPLPSTR*TCLLLAQRPQMHNI Trigger: AATATTATGCATCTGAGGTCGCTGGGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCAAAGATTACCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CCA 90 bp | TACCGATCTTGGCATCTCGGAAGAATTTCTCCACAGGGTAATCTTTaGTGTAGCCGACCCCTCCCATCCACTCGATGCACTTGCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRSWHLGRISPQGNL*CSRPLPSTRCTCLL Trigger: CAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCAAAGATTACCCTGTGGAGAAATTCTTCCGAGATGCCAAGATCGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTCAGGGTCTGCATCCACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTAAGGAGACAAGCAGGTaGGGAAGCGTCTTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVRVCIHPFLSYHTHLSVKETSR*GSVFSA Trigger: TGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCTT...AACAGACAGATGAGTGTGATAAGAAAGGAAGGGGTGGATGCAGACCCTGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS TCA 90 bp | CAGCCCTTGCTGGAACAATCCCTGGATCACCGATTTCTCCATTTTTaGGTTCTCATCCATAGAGGAAACCAGAGGAGCAACGTGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPLLEQSLDHRFLHF*VLIHRGNQRSNVLL Trigger: CAGGAGCACGTTGCTCCTCTGGTTTCCTCTATGGATGAGAACTCAAAAATGGAGAAATCGGTGATCCAGGGATTGTTCCAGCAAGGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGTCACTGAAGGGAGAAGAAGCCAGTCAAGGAGAAGAGGCCTCCGGCAGTATATTGTACCGATCTaGGCATCTCGGAAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVVTEGRRSQSRRRGLRQYIVPI*ASRKNF Trigger: GAAATTCTTCCGAGATGCCAAGATCGGTACAATATA...CTGCCGGAGGCCTCTTCTCCTTGACTGGCTTCTTCTCCCTTCAGTGACCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS CCA 90 bp | AGTACTCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTGTACCGATCTTGGCATCTCGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: STLHRCAWRWCSAGC*KLLHILYRSWHLGR Trigger: TCTTCCGAGATGCCAAGATCGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS-3UTR CAA 90 bp | AGGCCCAACCAGAGGACTCTTGGCTCTAGAAATGAGCCTTTTGAAAAGCATTCTCTGAGCCACTTGGTGTaGGAGCCCCTGAAAATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RPNQRTLGSRNEPFEKHSLSHLV*EPLKIK Trigger: TTTGATTTTCAGGGGCTCCAACACCAAGTGGCTCAG...AGAATGCTTTTCAAAAGGCTCATTTCTAGAGCCAAGAGTCCTCTGGTTGGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS GCA 90 bp | AGAAAAAGGAAGCTTCTGTCCCTCCATATTGTGCTTCAACTTCAATaGCCATCAGCCCTTGCTGGAACAATCCCTGGATCACCGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRKLLSLHIVLQLQ*PSALAGTIPGSPIS Trigger: AGAAATCGGTGATCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACAATATGGAGGGACAGAAGCTTCCTTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CCA 90 bp | GTGGCAAATAAAACAGGAGACCATGGAAAGCCTGCTTACCGATCTTaGCATCTCGGAAGAATTTCTCCACAGGGTAATCTTTGGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VANKTGDHGKPAYRS*HLGRISPQGNLWCS Trigger: GCTACACCAAAGATTACCCTGTGGAGAAATTCTTCCGAGATGCCAAGATCGGTAAGCAGGCTTTCCATGGTCTCCTGTTTTATTTGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | GGTGTTGCATTGTGGTCTCGGATAATTAAAGTCAGTATCGCAGTTACTGTTCTCAAGGAGACAAGCAGGTaGGGAAGCGTCTTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVALWSRIIKVSIAVTVLKETSR*GSVFSA Trigger: TGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCTT...GAGAACAGTAACTGCGATACTGACTTTAATTATCCGAGACCACAATGCAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133277.4 |
||
| CDS-3UTR CAA 90 bp | CCTGTCAGGGTCTGCATCCACCCCTTCCTTTCTTATCACACTCATCTGTCTGTTAAGCTCCTTCATATATaGTACCGATCTTGGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVRVCIHPFLSYHTHLSVKLLHI*YRSWHL Trigger: GAGATGCCAAGATCGGTACAATATATGAAGGAGCTT...AACAGACAGATGAGTGTGATAAGAAAGGAAGGGGTGGATGCAGACCCTGACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS CCA 90 bp | TGTGCTTCAACTTCAATGCCCATCAGCCCTTGCTGGAACAATCCCTaGATCACCGATTTCTCCATTTTTGAGTTCTCATCCATAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CASTSMPISPCWNNP*ITDFSIFEFSSIEE Trigger: TTCCTCTATGGATGAGAACTCAAAAATGGAGAAATCGGTGATCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CCA 90 bp | GTGGATGAAGCTCTGATGCCCATTTTATTTTCTCGTTTCCCTATCTaGAAACCTTCTGTATCTCGGTCTACTAAGAAGCAGGTGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VDEALMPILFSRFPI*KPSVSRSTKKQVMP Trigger: AGGCATCACCTGCTTCTTAGTAGACCGAGATACAGAAGGTTTCCAGATAGGGAAACGAGAAAATAAAATGGGCATCAGAGCTTCATCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGAAATAGACTTAGAGTAGATTGGAAAGAGACAGGAACAAAATCCAGGCCTAAGGAGACAAGCAGGTaGGGAAGCGTCTTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRNRLRVDWKETGTKSRPKETSR*GSVFSA Trigger: TGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCTT...AGGCCTGGATTTTGTTCCTGTCTCTTTCCAATCTACTCTAAGTCTATTTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CCA 90 bp | TCTTCTGAAGCGTGTTTTCTAAACAGGTTGTTAATTATTGTGTTCTaGATGTCACACAGGAGAGCCACCGAAGCATCCACCTTAGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSEACFLNRLLIIVF*MSHRRATEASTLAS Trigger: ACTAGCTAAGGTGGATGCTTCGGTGGCTCTCCTGTGTGACATCCAGAACACAATAATTAACAACCTGTTTAGAAAACACGCTTCAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS-3UTR CAA 90 bp | TGGCGATGGTGTTCAGCTGGATGTTGGAAGCTCCTTCATATATTGTACCTTAAAGCAAAGGCTACTGCATaGTTTGTCAGACTGACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRWCSAGCWKLLHILYLKAKATA*FVRLTR Trigger: TCTAGTCAGTCTGACAAACAATGCAGTAGCCTTTGC...TTTAAGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | ACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTAGAGTGAAACTTTTGGCCTGCTTACCGATCTaGGCATCTCGGAAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNTSNGFFFPNAARVKLLACLPI*ASRKNF Trigger: GAAATTCTTCCGAGATGCCAAGATCGGTAAGCAGGC...CAAAAGTTTCACTCTAGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGTCAGCAATACCAATACCTCAAATGGTTTCTTCTTCCCAAATGCTGCTGCAAAGGCTACTGCATaGTTTGTCAGACTGACTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISVSNTNTSNGFFFPNAAAKATA*FVRLTR Trigger: TCTAGTCAGTCTGACAAACAATGCAGTAGCCTTTGC...AGCAGCATTTGGGAAGAAGAAACCATTTGAGGTATTGGTATTGCTGACAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS TCA 90 bp | TTTTTCTGTAACCAGCTTTGGCAAATAGGTGGCCTTCTGTTCTTCTaGAGCGTGTTTTCTAAACAGGTTGTTAATTATTGTGTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FFCNQLWQIGGLLFF*SVFSKQVVNYCVLD Trigger: ATCCAGAACACAATAATTAACAACCTGTTTAGAAAACACGCTTCAGAAGAACAGAAGGCCACCTATTTGCCAAAGCTGGTTACAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CAA 72 bp | GGACACGAGGAGGAATCTTCCAAGGAGACAAGCAGGTaGGGAAGCGTCTTCTCAGCAGCCCGCCCATACGCC | + |
|
Preference number: 6 (lower is better) Translates to: GHEEESSKETSR*GSVFSAARPYA Trigger: GGCGTATGGGCGGGCTGCTGAGAAGACGCTTCCCAACCTGCTTGTCTCCTTGGAAGATTCCTCCTCGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS GCA 72 bp | GGGTCCACATTGGCGAAGACCAGGAAGAGCTCTGCATaGTCGGCATGGCTGATCCACATCTTCGACCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: GSTLAKTRKSSA*SAWLIHIFDPL Trigger: CAATGGGTCGAAGATGTGGATCAGCCATGCCGAGCATGCAGAGCTCTTCCTGGTCTTCGCCAATGTGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS GCA 72 bp | TGGTGTAGCCGACCCCTCCCATCCACTCGATGCACTTaGTTGTTGTTAGCCCAGCGACCTCAGATGCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: WCSRPLPSTRCT*LLLAQRPQMHN Trigger: ATTATGCATCTGAGGTCGCTGGGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS GCA 72 bp | AATCTTTGGTGTAGCCGACCCCTCCCATCCACTCGATaGACTTGCTTGTTGTTAGCCCAGCGACCTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: NLWCSRPLPSTR*TCLLLAQRPQM Trigger: CATCTGAGGTCGCTGGGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCAAAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CAA 72 bp | ATAAATGGCCTTCCGGCTTCTACGAGCCTAGCAGCGTaGTATGTTAGCAACCGTGTGGCTTCCAGCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: INGLPASTSLAA*YVSNRVASSWV Trigger: CACCCAGCTGGAAGCCACACGGTTGCTAACATACAACGCTGCTAGGCTCGTAGAAGCCGGAAGGCCATTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS TCA 72 bp | GGAAACCTTCTGTATCTCGGTCTACTAAGAAGCAGGTaGTGCCTCTGTAGCCAGAGCTGGGGTCCACATTGG | + |
|
Preference number: 6 (lower is better) Translates to: GNLLYLGLLRSR*CLCSQSWGPHW Trigger: CCAATGTGGACCCCAGCTCTGGCTACAGAGGCATCACCTGCTTCTTAGTAGACCGAGATACAGAAGGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CCA 72 bp | TGGCATCTCGGAAGAATTTCTCCACAGGGTAATCTTTaGTGTAGCCGACCCCTCCCATCCACTCGATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: WHLGRISPQGNL*CSRPLPSTRCT Trigger: AGTGCATCGAGTGGATGGGAGGGGTCGGCTACACCAAAGATTACCCTGTGGAGAAATTCTTCCGAGATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CAA 72 bp | TGTAGCCGACCCCTCCCATCCACTCGATGCACTTGCTaGTTGTTAGCCCAGCGACCTCAGATGCATAATATT | + |
|
Preference number: 6 (lower is better) Translates to: CSRPLPSTRCTC*LLAQRPQMHNI Trigger: AATATTATGCATCTGAGGTCGCTGGGCTAACAACAAGCAAGTGCATCGAGTGGATGGGAGGGGTCGGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 |
||
| CDS CAA 90 bp | ACTGCATTGTTTGTCAGACTGACTAGAGCTTCCGGTTGTGAGGATTaGAGGACACGAGGAGGAATCTTCCAAGGAGACAAGCAGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TALFVRLTRASGCED*RTRGGIFQGDKQVG Trigger: CCCAACCTGCTTGTCTCCTTGGAAGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGGAAGCTCTAGTCAGTCTGACAAACAATGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CAA 90 bp | CAGTACTCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTaGGAAGCTCCTTCATATATTGTACCGATCTTGGCATCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QYSASMCLAMVFSWM*EAPSYIVPILASRK Trigger: CTTCCGAGATGCCAAGATCGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTACTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
||
| CDS GCA 72 bp | AAGCTTCTGTCCCTCCATATTGTGCTTCAACTTCAATaGCCATCAGCCCTTGCTGGAACAATCCCTGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: KLLSLHIVLQLQ*PSALAGTIPGS Trigger: TGATCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACAATATGGAGGGACAGAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CAA 72 bp | TTTGTCAGACTGACTAGAGCTTCCGGTTGTGAGGATTaGAGGACACGAGGAGGAATCTTCCAAGGAGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: FVRLTRASGCED*RTRGGIFQGDK Trigger: CTTGTCTCCTTGGAAGATTCCTCCTCGTGTCCTCAAATCCTCACAACCGGAAGCTCTAGTCAGTCTGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CAA 72 bp | TCAGTAAGTGTCTGCAGAGGTGCAAAGGCTACTGCATaGTTTGTCAGACTGACTAGAGCTTCCGGTTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SVSVCRGAKATA*FVRLTRASGCE Trigger: CTCACAACCGGAAGCTCTAGTCAGTCTGACAAACAATGCAGTAGCCTTTGCACCTCTGCAGACACTTACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
||
| CDS CAA 72 bp | GCATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTaGGAAGCTCCTTCATATATTGTACCGATCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: ASMCLAMVFSWM*EAPSYIVPILA Trigger: TGCCAAGATCGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| CDS CAA 90 bp | ATTTCCTCATCAGTAAGTGTCTGCAGAGGTGCAAAGGCTACTGCATaGTTTGTCAGACTGACTAGAGCTTCCGGTTGTGAGGATTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ISSSVSVCRGAKATA*FVRLTRASGCEDLR Trigger: CCTCAAATCCTCACAACCGGAAGCTCTAGTCAGTCTGACAAACAATGCAGTAGCCTTTGCACCTCTGCAGACACTTACTGATGAGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
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| CDS CCA 72 bp | CATCGATGTGCTTGGCGATGGTGTTCAGCTGGATGTTaGAAGCTCCTTCATATATTGTACCGATCTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HRCAWRWCSAGC*KLLHILYRSWH Trigger: ATGCCAAGATCGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| CDS CCA 72 bp | TACTCTGCATCGATGTGCTTGGCGATGGTGTTCAGCTaGATGTTGGAAGCTCCTTCATATATTGTACCGATC | + |
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Preference number: 6 (lower is better) Translates to: YSASMCLAMVFS*MLEAPSYIVPI Trigger: GATCGGTACAATATATGAAGGAGCTTCCAACATCCAGCTGAACACCATCGCCAAGCACATCGATGCAGAGTA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015829.15 |
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| CDS CAA 72 bp | TCCATATTGTGCTTCAACTTCAATGCCCATCAGCCCTaGCTGGAACAATCCCTGGATCACCGATTTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SILCFNFNAHQP*LEQSLDHRFLH Trigger: ATGGAGAAATCGGTGATCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACAATATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
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| CDS CCA 72 bp | AAAACAGGAGACCATGGAAAGCCTGCTTACCGATCTTaGCATCTCGGAAGAATTTCTCCACAGGGTAATCTT | + |
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Preference number: 6 (lower is better) Translates to: KTGDHGKPAYRS*HLGRISPQGNL Trigger: AAGATTACCCTGTGGAGAAATTCTTCCGAGATGCCAAGATCGGTAAGCAGGCTTTCCATGGTCTCCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117518.2 |
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| CDS CCA 72 bp | TATTGTGCTTCAACTTCAATGCCCATCAGCCCTTGCTaGAACAATCCCTGGATCACCGATTTCTCCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: YCASTSMPISPC*NNPWITDFSIF Trigger: AAAAATGGAGAAATCGGTGATCCAGGGATTGTTCCAGCAAGGGCTGATGGGCATTGAAGTTGAAGCACAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
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| CDS TCA 72 bp | AACCAGCTTTGGCAAATAGGTGGCCTTCTGTTCTTCTaGAGCGTGTTTTCTAAACAGGTTGTTAATTATTGT | + |
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Preference number: 6 (lower is better) Translates to: NQLWQIGGLLFF*SVFSKQVVNYC Trigger: ACAATAATTAACAACCTGTTTAGAAAACACGCTTCAGAAGAACAGAAGGCCACCTATTTGCCAAAGCTGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015829.15 ENSMUST00000117518.2 ENSMUST00000133277.4 |
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