Pregenerated sensors for ACADM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062908Ensembl transcript IDs: ENSMUST00000072697.13, ENSMUST00000150070.2, ENSMUST00000156310.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCCTTCTTCTCTGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTaGGGAGGGCTCTGTCACACAGTAAGCACACATCATTGGCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: TLLLCFGLNGRHIRA*GGLCHTVSTHHWLL Trigger: GAGCAGCCAATGATGTGTGCTTACTGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAGAAGAAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| 3UTR GCA 90 bp | CCACATCTTCTGGCCGTTGATAACATACTCGTCACCCTTCTTCTCTaGTTTGGTCTTAATGGCCGCCACATCAGAGCCTGCGGAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: PHLLAVDNILVTLLL*FGLNGRHIRACGGL Trigger: GAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGAGCAGCAACAGTGCTTaGAGCTTAGTTACACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RHGNPLHRSKLVFDLISLSSNSA*SLVTRG Trigger: CCCTCGTGTAACTAAGCTCCAAGCACTGTTGCTGCT...CAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR-3UTR GCA 90 bp | CGCCATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGCTGAAGCAGCAACAGTaGTTGGAGCTTAGTTACACG | + |
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Preference number: 2 (lower is better) Translates to: RHGNPLHRSKLVFDLISLLKQQQ*LELSYT Trigger: CGTGTAACTAAGCTCCAAGCACTGTTGCTGCTTCAG...CAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR-3UTR TCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGAAAGCCCTTTTCCCCTaGAGCAGCAACAGTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QSLSKSQTYLERVTIELKKALFP*SSNSAW Trigger: CCAAGCACTGTTGCTGCTTCAGGGGAAAAGGGCTTT...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR-3UTR GCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGGCCATGGGAATCCGCTaGACAGATCCAAACTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLAMGIR*TDPNSS Trigger: AGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGC...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR GCA 72 bp | CTCTGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTaGGGAGGGCTCTGTCACACAGTAAGCACACATCAT | + |
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Preference number: 3 (lower is better) Translates to: LCFGLNGRHIRA*GGLCHTVSTHH Trigger: ATGATGTGTGCTTACTGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| 3UTR GCA 72 bp | CTGGCCGTTGATAACATACTCGTCACCCTTCTTCTCTaGTTTGGTCTTAATGGCCGCCACATCAGAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LAVDNILVTLLL*FGLNGRHIRAC Trigger: GCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| 3UTR GCA 72 bp | GAGCTGAAGACAGGTTCCTCCGCCATGGGAATCCGCTaGACAGATCCAAACTCGTCTTTGATCTCATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ELKTGSSAMGIR*TDPNSSLISFP Trigger: AGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCGGAGGAACCTGTCTTCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGGGAAAAGCAGCAACAGTGCTaGGAGCTTAGTTACACGAGG | + |
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Preference number: 3 (lower is better) Translates to: MGIRCTDPNSSLISFPWEKQQQC*ELSYTR Trigger: CCTCGTGTAACTAAGCTCCAAGCACTGTTGCTGCTT...TTCCCAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| 3UTR TCA 72 bp | TCATTTCCTTGGGAAGACAGTAAAGCCCTTTTCCCCTaGAGCAGCAACAGTGCTTGGAGCTTAGTTACACGA | + |
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Preference number: 3 (lower is better) Translates to: SFPWEDSKALFP*SSNSAWSLVTR Trigger: TCGTGTAACTAAGCTCCAAGCACTGTTGCTGCTTCAGGGGAAAAGGGCTTTACTGTCTTCCCAAGGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | CTCTGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTGCGGAGGGCTCTGTCACAGAGGGAACGGGTACTaGAAGGAGAACAGGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: LCFGLNGRHIRACGGLCHRGNGY*KENRYS Trigger: GCTGTACCTGTTCTCCTTTCAGTACCCGTTCCCTCT...GTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTGCGGAGGGCTCTGTCACACATTGCGGGCAGTTGCTTaGAACTCTTTCTGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CFGLNGRHIRACGGLCHTLRAVA*NSFCCS Trigger: GGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAA...TGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTGCGGAGGGCTCTGTCACACACCTCTCTGGCAAACTTaGGGGCAGTTGCTTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: CFGLNGRHIRACGGLCHTPLWQT*GQLLET Trigger: AGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGG...TGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS-3UTR CCA 90 bp | CGCCATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGTGGCCTTTCCCCCGTTaGTTATCCACATCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RHGNPLHRSKLVFDLISLWPFPR*LSTSSG Trigger: GCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCA...CAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGCGCCACATCAGAGCCTaGGGAGGGCTCTGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLRHIRA*GGLCHT Trigger: TGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCG...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GGACCAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGTCAACCTCCCAGGCTaGTCTCTGGTAACTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GPIIVQKPNLSRKGHHRAVNLPG*SLVTEP Trigger: AGGCTCAGTTACCAGAGAGCAGCCTGGGAGGTTGAC...AGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | GATAACATACTCGTCACCCTTCTTCTCTGCTTTGGTCTTAATGGCCGCCACATCGTTCGACACTCAAAATaGGAAACACTTCTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: DNILVTLLLCFGLNGRHIVRHSK*ETLLRT Trigger: GGTCCTGAGAAGTGTTTCTCATTTTGAGTGTCGAAC...GATGTGGCGGCCATTAAGACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS-3UTR CCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGCGAAAGCAATTCCTCTaGTGTCAGAGCATCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKRKQFL*CQSIAG Trigger: GCCAGCGATGCTCTGACACCAGAGGAATTGCTTTCG...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGCCAGGGCATACTTCGTaGCTTCGTCTAGAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKPGHTS*LRLELS Trigger: AGAGAGCTCTAGACGAAGCCACGAAGTATGCCCTGG...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGTTGCGGGCAGTTGCTTaGAACTCTTTCTGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKLRAVA*NSFCCS Trigger: GGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAA...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGCCTCTCTGGCAAACTTaGGGGCAGTTGCTTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLPLWQT*GQLLET Trigger: AGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGG...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | CTGAAGCAGCAACAGTGCTTGGAGCTTAGTTACACGAGGGTGATGCATCGTTCAAGAATCACAGGCATTTaGCCCAAAGAATTTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LKQQQCLELSYTRVMHRSRITGI*PKEFAS Trigger: TGAAGCAAATTCTTTGGGGCAAATGCCTGTGATTCT...TGAACGATGCATCACCCTCGTGTAACTAAGCTCCAAGCACTGTTGCTGCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGTGTGCTCACGAGCTATaGTCAGCCTCTGAATTTGTG | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKCAHEL*SASEFV Trigger: CACAAATTCAGAGGCTGATCATAGCTCGTGAGCACA...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGGCTTCAATAGCAGTTTaGACCCCTGTACACCCATAC | + |
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Preference number: 4 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLASIAV*TPVHPY Trigger: GTATGGGTGTACAGGGGTGCAAACTGCTATTGAAGC...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | ATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGGGAATTGCCCCAAAGAATTTaGTTCAATAGCAGTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: MGIRCTDPNSSLISFPWELPQRI*FNSSLH Trigger: GTGCAAACTGCTATTGAAGCAAATTCTTTGGGGCAA...TTCCCAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGAATGAAACTCCTTGGTaGTCCACTAGCAGCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKNETPW*STSSFP Trigger: TGGAAAGCTGCTAGTGGAGCACCAAGGAGTTTCATT...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGTCCAGCAAAGGCCTTTaGAATCGAGGCATAGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKSSKGL*NRGIVS Trigger: ACTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGA...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGGGGTACTTTAGGATCTaGGTTAGAACGTGCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKGYFRI*VRTCQQ Trigger: TTGTTGGCACGTTCTAACCCAGATCCTAAAGTACCC...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | ATGTCACAGTCTGACGTGTCCAATCTACCACAAATTTTCAGTGTTTATGTTAGATTCTGCGAGCAGAAATaGAACTCCTTGGTGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MSQSDVSNLPQIFSVYVRFCEQK*NSLVLH Trigger: GTGGAGCACCAAGGAGTTTCATTTCTGCTCGCAGAA...TCTAACATAAACACTGAAAATTTGTGGTAGATTGGACACGTCAGACTGTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GGACCAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTATCTGGGTTAGAACGTaGCAACAAGAAATACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GPIIVQKPNLSRKGHHRAIWVRT*QQEIPV Trigger: AACTGGTATTTCTTGTTGGCACGTTCTAACCCAGAT...AGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGGTTATCCACATCTTCTaGCCGTTGATAACATACTCG | + |
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Preference number: 4 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLVIHIF*PLITYS Trigger: CGAGTATGTTATCAACGGCCAGAAGATGTGGATAAC...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CCA 90 bp | ATGTCACAGTCTGACGTGTCCAATCTACCACAAATTTTCAGTGTTTATGTTAGACAGTGGCTAGCTGATTaGCAATGTCTCCAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: MSQSDVSNLPQIFSVYVRQWLAD*QCLQQR Trigger: CCTTTGCTGGAGACATTGCCAATCAGCTAGCCACTG...TCTAACATAAACACTGAAAATTTGTGGTAGATTGGACACGTCAGACTGTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGCAGCCTCTGAATTTGTaGAGTACCTTCATAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: QSLSKSQTYLERVTIELKQPLNL*STFINL Trigger: CAGATTTATGAAGGTACTGCACAAATTCAGAGGCTG...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CCA 90 bp | ATGTCACAGTCTGACGTGTCCAATCTACCACAAATTTTCAGTGTTTATGTTAGAGTGTCAGAGCATCGCTaGCCCATGTTTAGTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: MSQSDVSNLPQIFSVYVRVSEHR*PMFSSF Trigger: AAAGGAACTAAACATGGGCCAGCGATGCTCTGACAC...TCTAACATAAACACTGAAAATTTGTGGTAGATTGGACACGTCAGACTGTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR TCA 90 bp | ATGTCACAGTCTGACGTGTCCAATCTACCACAAATTTTCAGTGTTTATGTTAGAGTTCGACACTCAAAATaGGAAACACTTCTCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: MSQSDVSNLPQIFSVYVRVRHSK*ETLLRT Trigger: GGTCCTGAGAAGTGTTTCTCATTTTGAGTGTCGAAC...TCTAACATAAACACTGAAAATTTGTGGTAGATTGGACACGTCAGACTGTGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR GCA 90 bp | GTTTATGTTAGAATCATGAGTTCTTCCTTGACAAGCCGCCTTTCCTGTCACTTGTTATACTTTTCAATGTaGTCACGAGCTATGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: VYVRIMSSSLTSRLSCHLLYFSM*SRAMIS Trigger: GCTGATCATAGCTCGTGAGCACATTGAAAAGTATAA...CAAGTGACAGGAAAGGCGGCTTGTCAAGGAAGAACTCATGATTCTAACATAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS GCA 90 bp | GCATCGAACGTTCCCAGGCCAAGGCCACCGCAACTTTCCGGAATGTaGGCGTTGATCAAGCCGAGTTCCCAGGCTCTTTTGATGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: ASNVPRPRPPQLSGM*ALIKPSSQALLMRG Trigger: CCCTCTCATCAAAAGAGCCTGGGAACTCGGCTTGATCAACGCGCACATTCCGGAAAGTTGCGGTGGCCTTGGCCTGGGAACGTTCGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 ENSMUST00000156310.2 |
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| CDS GCA 90 bp | CGAGGCATAGTAAGTGTTCCGGCGACCGGAGTCAACCTCCCAGGCTaGTCTCTGGTAACTGAGCCTAGCGAGTTCAACCTTCATCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RGIVSVPATGVNLPG*SLVTEPSEFNLHRH Trigger: ATGGCGATGAAGGTTGAACTCGCTAGGCTCAGTTACCAGAGAGCAGCCTGGGAGGTTGACTCCGGTCGCCGGAACACTTACTATGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 90 bp | CCACTAGCAGCTTTCCAAATGTCTTCCTATCCAGGGCATACTTCGTaGCTTCGTCTAGAGCTCTCTGGGCTAGCCCGACAGCGCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLAAFQMSSYPGHTS*LRLELSGLARQRQL Trigger: CAGCTGGCGCTGTCGGGCTAGCCCAGAGAGCTCTAGACGAAGCCACGAAGTATGCCCTGGATAGGAAGACATTTGGAAAGCTGCTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CTCTGCTTTGGTCTTAATGGCCGCCACATCAGAGCCTGCGGAGGGCTCTGTCACCTTGCGGGCAGTTGCTaGAAACTCTTTCTGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LCFGLNGRHIRACGGLCHLAGSC*KLFLLF Trigger: GAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAG...GTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATTAAGACCAAAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS-3UTR CAA 90 bp | AATGGCCGCCACATCAGAGCCTGCGGAGGGCTCTGTCACACAGTAAGCACACATCAAACTTGCGGGCAGTaGCTTGAAACTCTTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: NGRHIRACGGLCHTVSTHQTCGQ*LETLSA Trigger: AGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTG...ATGTGTGCTTACTGTGTGACAGAGCCCTCCGCAGGCTCTGATGTGGCGGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156310.2 |
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| CDS CCA 90 bp | ATCCATAGCCTCCGAAAATCTGCACGGCGTCAGTGGCTAGCTGATTaGCAATGTCTCCAGCAAAGGCCTTTGCAATCGAGGCATAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: IHSLRKSARRQWLAD*QCLQQRPLQSRHSK Trigger: CTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGAGACATTGCCAATCAGCTAGCCACTGACGCCGTGCAGATTTTCGGAGGCTATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CGCCATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGCTTGCGGGCAGTTGCTaGAAACTCTTTCTGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RHGNPLHRSKLVFDLISLLAGSC*KLFLLF Trigger: GAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAG...CAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS TCA 90 bp | GCGACGGGGATAATCTCCTCTCTGGCAAACTTGCGGGCAGTTGCTTaGAACTCTTTCTGCTGTTCCGTCAACTCAAAACTAAACCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: ATGIISSLANLRAVA*NSFCCSVNSKLNPN Trigger: ATTAGGGTTTAGTTTTGAGTTGACGGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGGAGATTATCCCCGTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000156310.2 |
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| CDS GCA 90 bp | TCAACCTTCATCGCCATTTCTGCGAGCAGAAATGAAACTCCTTGGTaGTCCACTAGCAGCTTTCCAAATGTCTTCCTATCCAGGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: STFIAISASRNETPW*STSSFPNVFLSRAY Trigger: GTATGCCCTGGATAGGAAGACATTTGGAAAGCTGCTAGTGGAGCACCAAGGAGTTTCATTTCTGCTCGCAGAAATGGCGATGAAGGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 90 bp | AAGAAATACCAGTTGGCCTTTCCCCCGTTGGTTATCCACATCTTCTaGCCGTTGATAACATACTCGTCACCCTTCTTCTCTGCTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: KKYQLAFPPLVIHIF*PLITYSSPFFSALV Trigger: GACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTGGTATTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | GGACCAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTAGTAAGCACACATCATaGGCTGCTCCGTCATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GPIIVQKPNLSRKGHHRASKHTS*AAPSSS Trigger: GGAGGATGACGGAGCAGCCAATGATGTGTGCTTACT...AGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 90 bp | CACAATGAATCCAGTAAAGGCTTTACTAGCGGGTACTTTAGGATCTaGGTTAGAACGTGCCAACAAGAAATACCAGTTGGCCTTTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: HNESSKGFTSGYFRI*VRTCQQEIPVGLSP Trigger: GGGGGAAAGGCCAACTGGTATTTCTTGTTGGCACGTTCTAACCCAGATCCTAAAGTACCCGCTAGTAAAGCCTTTACTGGATTCATTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | ATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGGGAATGCTTCAATAGCAGTTaGCACCCCTGTACACCCATA | + |
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Preference number: 5 (lower is better) Translates to: MGIRCTDPNSSLISFPWECFNSS*HPCTPI Trigger: TATGGGTGTACAGGGGTGCAAACTGCTATTGAAGCA...TTCCCAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CGCCATGGGAATCCGCTGCACAGATCCAAACTCGTCTTTGATCTCATTTCCTTGAAGAATCACAGGCATTaGCCCCAAAGAATTTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RHGNPLHRSKLVFDLISLKNHRH*PQRICF Trigger: GAAGCAAATTCTTTGGGGCAAATGCCTGTGATTCTT...CAAGGAAATGAGATCAAAGACGAGTTTGGATCTGTGCAGCGGATTCCCATGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGTTGGCCTTTCCCCCGTaGGTTATCCACATCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QSLSKSQTYLERVTIELKLAFPP*VIHIFW Trigger: CCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAA...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGCTCCAGCAAAGGCCTTaGCAATCGAGGCATAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: QSLSKSQTYLERVTIELKLQQRP*QSRHSK Trigger: CTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGAG...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS-3UTR CAA 90 bp | CAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGAAGCAAACTTGCGGGCAGTaGCTTGAAACTCTTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: QSLSKSQTYLERVTIELKQTCGQ*LETLSA Trigger: AGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTG...CTTCAGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS GCA 90 bp | AGAATCACAGGCATTTGCCCCAAAGAATTTGCTTCAATAGCAGTTTaGACCCCTGTACACCCATACGCCAACTCTTCGGTAATTAAACAA | + |
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Preference number: 5 (lower is better) Translates to: RITGICPKEFASIAV*TPVHPYANSSVIKQ Trigger: TTGTTTAATTACCGAAGAGTTGGCGTATGGGTGTACAGGGGTGCAAACTGCTATTGAAGCAAATTCTTTGGGGCAAATGCCTGTGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 |
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| CDS-3UTR CAA 90 bp | GGACCAATCATTGTCCAAAAGCCAAACCTATCTAGAAAGGGTCACCATAGAGCTGATCAGCCTCTGAATTaGTGCAGTACCTTCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: GPIIVQKPNLSRKGHHRADQPLN*CSTFIN Trigger: ATTTATGAAGGTACTGCACAAATTCAGAGGCTGATC...AGCTCTATGGTGACCCTTTCTAGATAGGTTTGGCTTTTGGACAATGATTGGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 72 bp | ACACCTGAGCCTAGGCAGGCTGGCCACCCAATCTCCTaGCCATACACGACTTCCCCACTTCCCCGGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: TPEPRQAGHPIS*PYTTSPLPRQP Trigger: GGGTTGCCGGGGAAGTGGGGAAGTCGTGTATGGCCAGGAGATTGGGTGGCCAGCCTGCCTAGGCTCAGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150070.2 ENSMUST00000156310.2 |
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| CDS CAA 90 bp | AACGTTCCCAGGCCAAGGCCACCGCAACTTTCCGGAATGTGCGCGTaGATCAAGCCGAGTTCCCAGGCTCTTTTGATGAGAGGGAACGGG | + |
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Preference number: 6 (lower is better) Translates to: NVPRPRPPQLSGMCA*IKPSSQALLMRGNG Trigger: CCCGTTCCCTCTCATCAAAAGAGCCTGGGAACTCGGCTTGATCAACGCGCACATTCCGGAAAGTTGCGGTGGCCTTGGCCTGGGAACGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 ENSMUST00000156310.2 |
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| CDS GCA 72 bp | GTTCCCAGGCCAAGGCCACCGCAACTTTCCGGAATGTaGGCGTTGATCAAGCCGAGTTCCCAGGCTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: VPRPRPPQLSGM*ALIKPSSQALL Trigger: CAAAAGAGCCTGGGAACTCGGCTTGATCAACGCGCACATTCCGGAAAGTTGCGGTGGCCTTGGCCTGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 ENSMUST00000156310.2 |
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| CDS GCA 72 bp | GTAAGTGTTCCGGCGACCGGAGTCAACCTCCCAGGCTaGTCTCTGGTAACTGAGCCTAGCGAGTTCAACCTT | + |
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Preference number: 6 (lower is better) Translates to: VSVPATGVNLPG*SLVTEPSEFNL Trigger: AAGGTTGAACTCGCTAGGCTCAGTTACCAGAGAGCAGCCTGGGAGGTTGACTCCGGTCGCCGGAACACTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 90 bp | CGGCGTCAGTGGCTAGCTGATTGGCAATGTCTCCAGCAAAGGCCTTaGCAATCGAGGCATAGTAAGTGTTCCGGCGACCGGAGTCAACCT | + |
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Preference number: 6 (lower is better) Translates to: RRQWLADWQCLQQRP*QSRHSKCSGDRSQP Trigger: AGGTTGACTCCGGTCGCCGGAACACTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGAGACATTGCCAATCAGCTAGCCACTGACGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 72 bp | AGGCCAAGGCCACCGCAACTTTCCGGAATGTGCGCGTaGATCAAGCCGAGTTCCCAGGCTCTTTTGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: RPRPPQLSGMCA*IKPSSQALLMR Trigger: TCTCATCAAAAGAGCCTGGGAACTCGGCTTGATCAACGCGCACATTCCGGAAAGTTGCGGTGGCCTTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 ENSMUST00000156310.2 |
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| CDS CCA 72 bp | GCTTTCCAAATGTCTTCCTATCCAGGGCATACTTCGTaGCTTCGTCTAGAGCTCTCTGGGCTAGCCCGACAG | + |
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Preference number: 6 (lower is better) Translates to: AFQMSSYPGHTS*LRLELSGLARQ Trigger: CTGTCGGGCTAGCCCAGAGAGCTCTAGACGAAGCCACGAAGTATGCCCTGGATAGGAAGACATTTGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 72 bp | TGGCTAGCTGATTGGCAATGTCTCCAGCAAAGGCCTTaGCAATCGAGGCATAGTAAGTGTTCCGGCGACCGG | + |
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Preference number: 6 (lower is better) Translates to: WLADWQCLQQRP*QSRHSKCSGDR Trigger: CCGGTCGCCGGAACACTTACTATGCCTCGATTGCAAAGGCCTTTGCTGGAGACATTGCCAATCAGCTAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 90 bp | GGGTTAGAACGTGCCAACAAGAAATACCAGTTGGCCTTTCCCCCGTaGGTTATCCACATCTTCTGGCCGTTGATAACATACTCGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: GLERANKKYQLAFPP*VIHIFWPLITYSSP Trigger: GGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTGGTATTTCTTGTTGGCACGTTCTAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 72 bp | CAGTTGGCCTTTCCCCCGTTGGTTATCCACATCTTCTaGCCGTTGATAACATACTCGTCACCCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QLAFPPLVIHIF*PLITYSSPFFS Trigger: AGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 72 bp | GCCTTTCCCCCGTTGGTTATCCACATCTTCTGGCCGTaGATAACATACTCGTCACCCTTCTTCTCTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: AFPPLVIHIFWP*ITYSSPFFSAL Trigger: CAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS GCA 72 bp | GGCATTTGCCCCAAAGAATTTGCTTCAATAGCAGTTTaGACCCCTGTACACCCATACGCCAACTCTTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: GICPKEFASIAV*TPVHPYANSSV Trigger: TACCGAAGAGTTGGCGTATGGGTGTACAGGGGTGCAAACTGCTATTGAAGCAAATTCTTTGGGGCAAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 |
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| CDS CAA 72 bp | AGGCATTTGCCCCAAAGAATTTGCTTCAATAGCAGTTaGCACCCCTGTACACCCATACGCCAACTCTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: RHLPQRICFNSS*HPCTPIRQLFG Trigger: ACCGAAGAGTTGGCGTATGGGTGTACAGGGGTGCAAACTGCTATTGAAGCAAATTCTTTGGGGCAAATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000150070.2 |
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| CDS CAA 72 bp | CGTGCCAACAAGAAATACCAGTTGGCCTTTCCCCCGTaGGTTATCCACATCTTCTGGCCGTTGATAACATAC | + |
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Preference number: 6 (lower is better) Translates to: RANKKYQLAFPP*VIHIFWPLITY Trigger: GTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTGGTATTTCTTGTTGGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 90 bp | TACCAGTTGGCCTTTCCCCCGTTGGTTATCCACATCTTCTGGCCGTaGATAACATACTCGTCACCCTTCTTCTCTGCTTTGGTCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: YQLAFPPLVIHIFWP*ITYSSPFFSALVLM Trigger: CATTAAGACCAAAGCAGAGAAGAAGGGTGACGAGTATGTTATCAACGGCCAGAAGATGTGGATAACCAACGGGGGAAAGGCCAACTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 90 bp | GCTGCGACTGTAGGTCTGGTTCTATCAAAAGCACCCATTGCGATCTaGAAACCTGCTCCTTCACCGATTAACACATTTTCCTTAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: AATVGLVLSKAPIAI*KPAPSPINTFSLGT Trigger: AGTGCCTAAGGAAAATGTGTTAATCGGTGAAGGAGCAGGTTTCAAGATCGCAATGGGTGCTTTTGATAGAACCAGACCTACAGTCGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS GCA 72 bp | TTTACTAGCGGGTACTTTAGGATCTGGGTTAGAACGTaGCAACAAGAAATACCAGTTGGCCTTTCCCCCGTT | + |
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Preference number: 6 (lower is better) Translates to: FTSGYFRIWVRT*QQEIPVGLSPV Trigger: AACGGGGGAAAGGCCAACTGGTATTTCTTGTTGGCACGTTCTAACCCAGATCCTAAAGTACCCGCTAGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS GCA 72 bp | ATCGCCATTTCTGCGAGCAGAAATGAAACTCCTTGGTaGTCCACTAGCAGCTTTCCAAATGTCTTCCTATCC | + |
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Preference number: 6 (lower is better) Translates to: IAISASRNETPW*STSSFPNVFLS Trigger: GGATAGGAAGACATTTGGAAAGCTGCTAGTGGAGCACCAAGGAGTTTCATTTCTGCTCGCAGAAATGGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CCA 72 bp | TCCAGTAAAGGCTTTACTAGCGGGTACTTTAGGATCTaGGTTAGAACGTGCCAACAAGAAATACCAGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SSKGFTSGYFRI*VRTCQQEIPVG Trigger: GCCAACTGGTATTTCTTGTTGGCACGTTCTAACCCAGATCCTAAAGTACCCGCTAGTAAAGCCTTTACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 72 bp | GATAATCTCCTCTCTGGCAAACTTGCGGGCAGTTGCTaGAAACTCTTTCTGCTGTTCCGTCAACTCAAAACT | + |
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Preference number: 6 (lower is better) Translates to: DNLLSGKLAGSC*KLFLLFRQLKT Trigger: AGTTTTGAGTTGACGGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGGAGATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000156310.2 |
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| CDS TCA 72 bp | ATAATCTCCTCTCTGGCAAACTTGCGGGCAGTTGCTTaGAACTCTTTCTGCTGTTCCGTCAACTCAAAACTA | + |
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Preference number: 6 (lower is better) Translates to: IISSLANLRAVA*NSFCCSVNSKL Trigger: TAGTTTTGAGTTGACGGAACAGCAGAAAGAGTTTCAAGCAACTGCCCGCAAGTTTGCCAGAGAGGAGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072697.13 ENSMUST00000156310.2 |
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| CDS CAA 72 bp | GTAGGTCTGGTTCTATCAAAAGCACCCATTGCGATCTaGAAACCTGCTCCTTCACCGATTAACACATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VGLVLSKAPIAI*KPAPSPINTFS Trigger: GGAAAATGTGTTAATCGGTGAAGGAGCAGGTTTCAAGATCGCAATGGGTGCTTTTGATAGAACCAGACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 72 bp | TTCAATGTGCTCACGAGCTATGATCAGCCTCTGAATTaGTGCAGTACCTTCATAAATCTGATAGATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FNVLTSYDQPLN*CSTFINLIDLG Trigger: GCCAAGATCTATCAGATTTATGAAGGTACTGCACAAATTCAGAGGCTGATCATAGCTCGTGAGCACATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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| CDS CAA 90 bp | TTTATACTTTTCAATGTGCTCACGAGCTATGATCAGCCTCTGAATTaGTGCAGTACCTTCATAAATCTGATAGATCTTGGCGTCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FILFNVLTSYDQPLN*CSTFINLIDLGVPH Trigger: ATGAGGGACGCCAAGATCTATCAGATTTATGAAGGTACTGCACAAATTCAGAGGCTGATCATAGCTCGTGAGCACATTGAAAAGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072697.13 |
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